NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105357

Metagenome Family F105357

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105357
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 70 residues
Representative Sequence MDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Number of Associated Samples 68
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.00 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 66.00 %
Associated GOLD sequencing projects 62
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine
(37.000 % of family members)
Environment Ontology (ENVO) Unclassified
(88.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.08%    β-sheet: 26.76%    Coil/Unstructured: 59.15%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01139RtcB 39.00
PF00106adh_short 4.00
PF01984dsDNA_bind 4.00
PF00411Ribosomal_S11 2.00
PF00586AIRS 2.00
PF00833Ribosomal_S17e 1.00
PF00808CBFD_NFYB_HMF 1.00
PF10397ADSL_C 1.00
PF02880PGM_PMM_III 1.00
PF10592AIPR 1.00
PF08264Anticodon_1 1.00
PF00733Asn_synthase 1.00
PF02769AIRS_C 1.00
PF00561Abhydrolase_1 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 39.00
COG2118DNA-binding TFAR19-related protein, PDSD5 familyGeneral function prediction only [R] 4.00
COG0100Ribosomal protein S11Translation, ribosomal structure and biogenesis [J] 2.00
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 1.00
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 1.00
COG1383Ribosomal protein S17ETranslation, ribosomal structure and biogenesis [J] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.00 %
All OrganismsrootAll Organisms21.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2014642002|2014667867Not Available943Open in IMG/M
3300000142|LPaug09P16500mDRAFT_c1015905Not Available1336Open in IMG/M
3300000142|LPaug09P16500mDRAFT_c1055111Not Available568Open in IMG/M
3300000219|LPfeb10P161000mDRAFT_c1006671All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus2521Open in IMG/M
3300000247|LPaug09P26500mDRAFT_1043104Not Available545Open in IMG/M
3300000323|LPaug09P202000mDRAFT_1001730All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus5119Open in IMG/M
3300002913|JGI26060J43896_10058208Not Available1070Open in IMG/M
3300005402|Ga0066855_10176205Not Available690Open in IMG/M
3300005425|Ga0066859_10041902Not Available1403Open in IMG/M
3300005593|Ga0066837_10089619Not Available1138Open in IMG/M
3300005837|Ga0078893_12422343Not Available821Open in IMG/M
3300005945|Ga0066381_10231911Not Available531Open in IMG/M
3300005948|Ga0066380_10142188Not Available719Open in IMG/M
3300005948|Ga0066380_10288536Not Available503Open in IMG/M
3300005951|Ga0066379_10203254Not Available639Open in IMG/M
3300006011|Ga0066373_10121368Not Available747Open in IMG/M
3300006011|Ga0066373_10251026Not Available518Open in IMG/M
3300006012|Ga0066374_10213478Not Available564Open in IMG/M
3300006076|Ga0081592_1040302Not Available2234Open in IMG/M
3300006306|Ga0068469_1104798Not Available1428Open in IMG/M
3300006308|Ga0068470_1079337All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus7717Open in IMG/M
3300006308|Ga0068470_1118181All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota13401Open in IMG/M
3300006308|Ga0068470_1264456All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis cloacae3279Open in IMG/M
3300006308|Ga0068470_1319454Not Available1473Open in IMG/M
3300006308|Ga0068470_1327650Not Available893Open in IMG/M
3300006310|Ga0068471_1089570All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota19058Open in IMG/M
3300006310|Ga0068471_1091703All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis8124Open in IMG/M
3300006310|Ga0068471_1108891All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota10535Open in IMG/M
3300006310|Ga0068471_1115985All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota12060Open in IMG/M
3300006310|Ga0068471_1118078All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus sediminis5919Open in IMG/M
3300006310|Ga0068471_1126322Not Available1654Open in IMG/M
3300006310|Ga0068471_1130566Not Available2478Open in IMG/M
3300006310|Ga0068471_1164037Not Available3314Open in IMG/M
3300006310|Ga0068471_1180539All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis4605Open in IMG/M
3300006310|Ga0068471_1183099Not Available2419Open in IMG/M
3300006310|Ga0068471_1501859Not Available1482Open in IMG/M
3300006310|Ga0068471_1515034Not Available1686Open in IMG/M
3300006310|Ga0068471_1543208Not Available1454Open in IMG/M
3300006313|Ga0068472_10254547Not Available1270Open in IMG/M
3300006313|Ga0068472_10386143Not Available1850Open in IMG/M
3300006313|Ga0068472_10746842Not Available500Open in IMG/M
3300006324|Ga0068476_1057307Not Available2191Open in IMG/M
3300006324|Ga0068476_1100022All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus5621Open in IMG/M
3300006325|Ga0068501_1097718All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis5934Open in IMG/M
3300006331|Ga0068488_1186962All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300006335|Ga0068480_1139277Not Available1518Open in IMG/M
3300006336|Ga0068502_1149982All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota10737Open in IMG/M
3300006336|Ga0068502_1285776All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota3119Open in IMG/M
3300006338|Ga0068482_1312047Not Available2051Open in IMG/M
3300006339|Ga0068481_1063575All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota16623Open in IMG/M
3300006340|Ga0068503_10184976All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota10568Open in IMG/M
3300006340|Ga0068503_10436403All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota8013Open in IMG/M
3300006341|Ga0068493_10201299All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus6612Open in IMG/M
3300006341|Ga0068493_10332515Not Available2234Open in IMG/M
3300006341|Ga0068493_11050969Not Available638Open in IMG/M
3300006344|Ga0099695_1302260Not Available588Open in IMG/M
3300006346|Ga0099696_1157051Not Available514Open in IMG/M
3300006414|Ga0099957_1237863Not Available880Open in IMG/M
3300006414|Ga0099957_1244174Not Available777Open in IMG/M
3300006414|Ga0099957_1515514Not Available1478Open in IMG/M
3300006567|Ga0099958_1074628All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1883Open in IMG/M
3300006567|Ga0099958_1112143Not Available513Open in IMG/M
3300006567|Ga0099958_1135415Not Available686Open in IMG/M
3300006902|Ga0066372_10986258Not Available514Open in IMG/M
3300007160|Ga0099959_1239336Not Available1210Open in IMG/M
3300007756|Ga0105664_1078607Not Available1798Open in IMG/M
3300008222|Ga0105356_10144345Not Available1487Open in IMG/M
3300008224|Ga0105350_10361441Not Available528Open in IMG/M
3300008250|Ga0105354_1168766Not Available834Open in IMG/M
3300009109|Ga0117922_1128112Not Available1214Open in IMG/M
3300009126|Ga0118723_1118470Not Available1584Open in IMG/M
3300020243|Ga0211655_1014267Not Available1210Open in IMG/M
3300020285|Ga0211602_1006731Not Available2019Open in IMG/M
3300020307|Ga0211609_1014994Not Available1478Open in IMG/M
3300020329|Ga0211632_1032529Not Available1084Open in IMG/M
3300020354|Ga0211608_10014883Not Available2080Open in IMG/M
3300020369|Ga0211709_10036221Not Available1634Open in IMG/M
3300020375|Ga0211656_10058903Not Available1235Open in IMG/M
3300020389|Ga0211680_10349621Not Available540Open in IMG/M
3300020412|Ga0211552_10241483Not Available652Open in IMG/M
3300020435|Ga0211639_10265610Not Available709Open in IMG/M
3300020443|Ga0211544_10262879Not Available681Open in IMG/M
3300020449|Ga0211642_10496194Not Available524Open in IMG/M
3300020476|Ga0211715_10429118Not Available649Open in IMG/M
3300020476|Ga0211715_10545564Not Available570Open in IMG/M
3300021791|Ga0226832_10031823Not Available1769Open in IMG/M
3300026074|Ga0208747_1014107Not Available2030Open in IMG/M
3300026084|Ga0208881_1030811Not Available1198Open in IMG/M
3300026091|Ga0207962_1013212Not Available2188Open in IMG/M
3300026092|Ga0207965_1014052Not Available2115Open in IMG/M
3300027622|Ga0209753_1048377Not Available1172Open in IMG/M
3300027827|Ga0209035_10043648Not Available2153Open in IMG/M
3300031757|Ga0315328_10045785Not Available2426Open in IMG/M
3300031886|Ga0315318_10173161Not Available1225Open in IMG/M
3300032048|Ga0315329_10279890Not Available884Open in IMG/M
3300032130|Ga0315333_10116034Not Available1250Open in IMG/M
3300032132|Ga0315336_1025387Not Available3770Open in IMG/M
3300032132|Ga0315336_1162358Not Available865Open in IMG/M
3300032360|Ga0315334_10565673Not Available978Open in IMG/M
3300032820|Ga0310342_102479295Not Available620Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine37.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine18.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine14.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine14.00%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater7.00%
Methane Seep MesocosmEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm3.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.00%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater1.00%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water1.00%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids1.00%
Diffuse Hydrothermal FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2014642002Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) - 5_Below_upper_mesopelagic_500mEnvironmentalOpen in IMG/M
3300000142Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500mEnvironmentalOpen in IMG/M
3300000219Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2010 P16 1000mEnvironmentalOpen in IMG/M
3300000247Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P26 500mEnvironmentalOpen in IMG/M
3300000323Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P20 2000mEnvironmentalOpen in IMG/M
3300002913Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LVEnvironmentalOpen in IMG/M
3300005402Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73EnvironmentalOpen in IMG/M
3300005425Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199EnvironmentalOpen in IMG/M
3300005593Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300005945Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_BEnvironmentalOpen in IMG/M
3300005948Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LVEnvironmentalOpen in IMG/M
3300005951Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006011Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LVEnvironmentalOpen in IMG/M
3300006012Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300006076Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid AEnvironmentalOpen in IMG/M
3300006306Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500mEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006313Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770mEnvironmentalOpen in IMG/M
3300006324Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500mEnvironmentalOpen in IMG/M
3300006325Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500mEnvironmentalOpen in IMG/M
3300006331Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000mEnvironmentalOpen in IMG/M
3300006335Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006344Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500mEnvironmentalOpen in IMG/M
3300006346Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770mEnvironmentalOpen in IMG/M
3300006414Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500mEnvironmentalOpen in IMG/M
3300006567Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770mEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300007160Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000mEnvironmentalOpen in IMG/M
3300007756Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300008222Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM9D Gulf of MexicoEnvironmentalOpen in IMG/M
3300008224Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1E Hudson CanyonEnvironmentalOpen in IMG/M
3300008250Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM9B Gulf of MexicoEnvironmentalOpen in IMG/M
3300009109Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300009126Combined Assembly of Gp0139357, Gp0139356EnvironmentalOpen in IMG/M
3300020243Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX556050-ERR599055)EnvironmentalOpen in IMG/M
3300020285Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555972-ERR599034)EnvironmentalOpen in IMG/M
3300020307Marine microbial communities from Tara Oceans - TARA_B100000408 (ERX555989-ERR599021)EnvironmentalOpen in IMG/M
3300020329Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX555981-ERR599083)EnvironmentalOpen in IMG/M
3300020354Marine microbial communities from Tara Oceans - TARA_B100000408 (ERX555905-ERR599164)EnvironmentalOpen in IMG/M
3300020369Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)EnvironmentalOpen in IMG/M
3300020375Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)EnvironmentalOpen in IMG/M
3300020389Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)EnvironmentalOpen in IMG/M
3300020412Marine microbial communities from Tara Oceans - TARA_B100001167 (ERX556053-ERR599047)EnvironmentalOpen in IMG/M
3300020435Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)EnvironmentalOpen in IMG/M
3300020443Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)EnvironmentalOpen in IMG/M
3300020449Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)EnvironmentalOpen in IMG/M
3300020476Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300026074Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026084Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B (SPAdes)EnvironmentalOpen in IMG/M
3300026091Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026092Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV (SPAdes)EnvironmentalOpen in IMG/M
3300027622Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m (SPAdes)EnvironmentalOpen in IMG/M
3300027827Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032130Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915EnvironmentalOpen in IMG/M
3300032132Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
20146793362014642002MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL
LPaug09P16500mDRAFT_101590523300000142MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCIIEVNKKLGLTKL*
LPaug09P16500mDRAFT_105511123300000142MarineMNIDKVVVSTRLKRDEDRYLVLIDVDPTASTNDEFLNVFPKGYHGLFEFDNELDAKQCLIEVNKKFGLSKL*
LPfeb10P161000mDRAFT_100667113300000219MarineDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
LPaug09P26500mDRAFT_104310423300000247MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCIIEVNKKLGLTKL*
LPaug09P202000mDRAFT_100173013300000323MarineTRTEQSKMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLTKL*
JGI26060J43896_1005820833300002913MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0066855_1017620523300005402MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0066859_1004190223300005425MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL*
Ga0066837_1008961913300005593MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0078893_1242234323300005837Marine Surface WaterMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0066381_1023191113300005945MarineIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNVFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0066380_1014218813300005948MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLG
Ga0066380_1028853613300005948MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDVFLNTFPNGYHGLFEFDNELDAKQYLIEVNKKLGLGKL*
Ga0066379_1020325423300005951MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0066373_1012136823300006011MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL*
Ga0066373_1025102623300006011MarineVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0066374_1021347823300006012MarineMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0081592_104030253300006076Diffuse Hydrothermal FluidsMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLTKL*
Ga0068469_110479823300006306MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0068470_107933743300006308MarineVVDRKCGKNKMKVDKVAVSTRLKRDEDRYLVLIDVDPIASTNDEFLKAFPKGYHGLFEFDNELDAKQYLIEVNKKLGLSKL*
Ga0068470_111818173300006308MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0068470_126445633300006308MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0068470_131945413300006308MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCIIEVNKKLGLGKL*
Ga0068470_132765023300006308MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQYLIEVNNKLGLGKL*
Ga0068471_1089570203300006310MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDEFLKVFPKGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0068471_109170323300006310MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0068471_110889123300006310MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLTEVNKKLGLGKL*
Ga0068471_1115985173300006310MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0068471_111807833300006310MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNKKLGLSKL*
Ga0068471_112632223300006310MarineMGIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQYIIEVNKKLGLTKL*
Ga0068471_113056633300006310MarineMKVDKVAVSTCLKRDEDRYLVLIDVDPIASTNDEFLKAFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL*
Ga0068471_116403723300006310MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDVFLNTFPNGYHGLFEFDNELDAKQYLIEVNKKLGLSKL*
Ga0068471_118053983300006310MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDVFLNTFPNGYHGLFEFDNELDAKQYLIEVNNKLGLGKL*
Ga0068471_118309943300006310MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKRCLTEVNKKLGLSKL*
Ga0068471_150185933300006310MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDEFLKVFPKGYHGLFEFDNELDAKQCIIEVNKKLGLTKL*
Ga0068471_151503443300006310MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0068471_154320833300006310MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLGKL*
Ga0068472_1025454723300006313MarineRTEQSKMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0068472_1038614323300006313MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCLIEVNKKLGLTKL*
Ga0068472_1074684223300006313MarineKMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0068476_105730723300006324MarineMKVDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0068476_110002253300006324MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0068501_109771813300006325MarineAVARKCGKNKMKVDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0068488_118696233300006331MarineKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCIIEVNKKLGLTKL*
Ga0068480_113927733300006335MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCIIEVNKKLGLSKL*
Ga0068502_114998213300006336MarineDKVAVSTRLKREEERYMELIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0068502_128577623300006336MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCIIEVNKKLGLTKL*
Ga0068482_131204733300006338MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQYLIEVNKKLGLSKL*
Ga0068481_106357573300006339MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDAFLNVFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0068503_1018497693300006340MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0068503_10436403133300006340MarineMKIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0068493_1020129923300006341MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0068493_1033251533300006341MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL*
Ga0068493_1105096913300006341MarineSTRLKRDEDRYLVLIDVDPTPSTNDVFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLTKL*
Ga0099695_130226013300006344MarineDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLSKL*
Ga0099696_115705123300006346MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKFGLSKL*
Ga0099957_123786323300006414MarineKMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0099957_124417423300006414MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCIIEVNKKLGLTKL*
Ga0099957_151551423300006414MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL*
Ga0099958_107462833300006567MarineVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0099958_111214313300006567MarineKVAVSTRLKRDEDRYLVLIDVDPTPSTNDVFLNAFPNGYHGLFEFDNELDAIQCLTEVNKKLGLSKL*
Ga0099958_113541513300006567MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAYPNGYHGLFEFDNELDAKQCLIEVNKKLGLGKL*
Ga0066372_1098625813300006902MarineMKVDKVAVSTRLKRDEDRYLVLIDVDPIASTNDEFLKAFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL*
Ga0099959_123933623300007160MarineMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNESDAKQCLIEVNKKLGLTKL*
Ga0105664_107860713300007756Background SeawaterMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCFTEVNKKLGLSKL*
Ga0105356_1014434523300008222Methane Seep MesocosmMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIVVNKKLGLGKL*
Ga0105350_1036144123300008224Methane Seep MesocosmMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCL
Ga0105354_116876623300008250Methane Seep MesocosmMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNKKLGLGKL*
Ga0117922_112811213300009109MarineVARKCGRNKMKVDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNESDAKQCLIEVNKKLGLGKL*
Ga0118723_111847013300009126MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKRCLIEVSKKLGLGKL*
Ga0211655_101426733300020243MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL
Ga0211602_100673113300020285MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Ga0211609_101499413300020307MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLI
Ga0211632_103252913300020329MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLTEVNKKLGLSKL
Ga0211608_1001488353300020354MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Ga0211709_1003622113300020369MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNELDAKQCIIEVNKKLGLTKL
Ga0211656_1005890313300020375MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL
Ga0211680_1034962113300020389MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLTKL
Ga0211552_1024148323300020412MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL
Ga0211639_1026561013300020435MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Ga0211544_1026287923300020443MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNKKLGLGKL
Ga0211642_1049619423300020449MarineMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLGKL
Ga0211715_1042911813300020476MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVN
Ga0211715_1054556413300020476MarineMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVN
Ga0226832_1003182323300021791Hydrothermal Vent FluidsMKVDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHRLFEFDNELDAKQCLIELNKKLGLGKL
Ga0208747_101410753300026074MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCFTEVNKKLGLSKL
Ga0208881_103081113300026084MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQC
Ga0207962_101321253300026091MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLTEVNKKLGLSKL
Ga0207965_101405253300026092MarineMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNAFPNGYHGLFEFDNESDAKQCIIEVNKKLGLTKL
Ga0209753_104837713300027622MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDVFLNTFPNGYHGLFEFDNELDAKQYLIEVNKK
Ga0209035_1004364813300027827MarineMNIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLT
Ga0315328_1004578523300031757SeawaterMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Ga0315318_1017316123300031886SeawaterMKVDKVAVSTRLKRDEDRYLVLIDVDPIASTNDEFLKAFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL
Ga0315329_1027989013300032048SeawaterMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKFGLSKL
Ga0315333_1011603433300032130SeawaterMDIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Ga0315336_102538733300032132SeawaterMNIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Ga0315336_116235823300032132SeawaterMDIDKVAVSTRLKRNEDRYLVLIDVDPTPSTNDTFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL
Ga0315334_1056567313300032360SeawaterMKIDKVAVSTRLKRDEDRYLVLIDVDPTASTNDEFLKVFPKGYHGLFEFDNELDAKQYLIEVNNKLGLGKL
Ga0310342_10247929513300032820SeawaterPSKTRTEQSKMDIDKVAVSTRLKRDEDRYLVLIDVDPTPSTNDAFLNTFPNGYHGLFEFDNELDAKQCLIEVNKKLGLSKL


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