NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105132

Metagenome / Metatranscriptome Family F105132

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105132
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 99 residues
Representative Sequence MDDRKSIIDRITGATEDTVARVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Number of Associated Samples 91
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.00 %
% of genes near scaffold ends (potentially truncated) 42.00 %
% of genes from short scaffolds (< 2000 bps) 89.00 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (67.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.000 % of family members)
Environment Ontology (ENVO) Unclassified
(47.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 74.51%    β-sheet: 0.00%    Coil/Unstructured: 25.49%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF132794HBT_2 25.00
PF030614HBT 20.00
PF00781DAGK_cat 10.00
PF01590GAF 3.00
PF01048PNP_UDP_1 2.00
PF08241Methyltransf_11 1.00
PF05532CsbD 1.00
PF00132Hexapep 1.00
PF13492GAF_3 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1597Phosphatidylglycerol kinase, diacylglycerol kinase familyLipid transport and metabolism [I] 20.00
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 2.00
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 2.00
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 2.00
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.00 %
UnclassifiedrootN/A33.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120604095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1232Open in IMG/M
3300003990|Ga0055455_10044724All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300004006|Ga0055453_10002654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3582Open in IMG/M
3300004156|Ga0062589_102062495All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300004479|Ga0062595_100024561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2359Open in IMG/M
3300004479|Ga0062595_101691335All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300004480|Ga0062592_102171155All Organisms → cellular organisms → Bacteria → Terrabacteria group552Open in IMG/M
3300005146|Ga0066817_1032443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria526Open in IMG/M
3300005164|Ga0066815_10009855All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300005165|Ga0066869_10015572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1093Open in IMG/M
3300005168|Ga0066809_10019640All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300005169|Ga0066810_10060293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria764Open in IMG/M
3300005185|Ga0066811_1000838All Organisms → cellular organisms → Bacteria1355Open in IMG/M
3300005331|Ga0070670_101823017All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005335|Ga0070666_10405039All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300005338|Ga0068868_100216948All Organisms → cellular organisms → Bacteria1600Open in IMG/M
3300005338|Ga0068868_101382994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria656Open in IMG/M
3300005434|Ga0070709_10564573All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300005446|Ga0066686_10693316Not Available688Open in IMG/M
3300005457|Ga0070662_101885928Not Available516Open in IMG/M
3300005518|Ga0070699_101961525All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005526|Ga0073909_10280762All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria750Open in IMG/M
3300005618|Ga0068864_102223946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300005874|Ga0075288_1013256All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300005884|Ga0075291_1006949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1228Open in IMG/M
3300005888|Ga0075289_1007569All Organisms → cellular organisms → Bacteria1419Open in IMG/M
3300005888|Ga0075289_1018766All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300006046|Ga0066652_100048292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3187Open in IMG/M
3300006575|Ga0074053_11955772All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300006581|Ga0074048_13194806All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300006603|Ga0074064_11734908All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300006604|Ga0074060_11846229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria943Open in IMG/M
3300006606|Ga0074062_12909032Not Available849Open in IMG/M
3300006871|Ga0075434_100561248All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300006904|Ga0075424_100263310Not Available1833Open in IMG/M
3300006954|Ga0079219_10142844All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300009094|Ga0111539_10831165Not Available1075Open in IMG/M
3300009553|Ga0105249_11365578All Organisms → cellular organisms → Bacteria → Terrabacteria group780Open in IMG/M
3300010403|Ga0134123_12521086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium580Open in IMG/M
3300011106|Ga0151489_1386437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300011107|Ga0151490_1033972All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300011107|Ga0151490_1266420All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300012356|Ga0137371_10721775All Organisms → cellular organisms → Bacteria → Terrabacteria group762Open in IMG/M
3300012360|Ga0137375_11219747Not Available574Open in IMG/M
3300012960|Ga0164301_11722640Not Available524Open in IMG/M
3300012984|Ga0164309_10517708Not Available917Open in IMG/M
3300012985|Ga0164308_11440825Not Available630Open in IMG/M
3300013296|Ga0157374_10855537All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300014968|Ga0157379_10934755Not Available824Open in IMG/M
3300015371|Ga0132258_10426403All Organisms → cellular organisms → Bacteria3302Open in IMG/M
3300015371|Ga0132258_13356733All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300015373|Ga0132257_100009372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9718Open in IMG/M
3300015373|Ga0132257_101035573Not Available1034Open in IMG/M
3300015373|Ga0132257_101443329All Organisms → cellular organisms → Bacteria → Terrabacteria group877Open in IMG/M
3300015374|Ga0132255_100436393All Organisms → cellular organisms → Bacteria1914Open in IMG/M
3300015374|Ga0132255_104342566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium601Open in IMG/M
3300018482|Ga0066669_11995010Not Available543Open in IMG/M
3300020070|Ga0206356_11273216Not Available1023Open in IMG/M
3300020080|Ga0206350_11615924All Organisms → cellular organisms → Bacteria → Terrabacteria group662Open in IMG/M
3300020081|Ga0206354_10020875All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300020082|Ga0206353_11120833All Organisms → cellular organisms → Bacteria → Terrabacteria group669Open in IMG/M
3300021445|Ga0182009_10180467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1018Open in IMG/M
3300025321|Ga0207656_10332580All Organisms → cellular organisms → Bacteria → Terrabacteria group756Open in IMG/M
3300025552|Ga0210142_1033953Not Available974Open in IMG/M
3300025899|Ga0207642_10004321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4579Open in IMG/M
3300025900|Ga0207710_10750077All Organisms → cellular organisms → Bacteria → Terrabacteria group513Open in IMG/M
3300025903|Ga0207680_10480538All Organisms → cellular organisms → Bacteria → Terrabacteria group884Open in IMG/M
3300025904|Ga0207647_10182865All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300025920|Ga0207649_10101043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1909Open in IMG/M
3300025934|Ga0207686_10039001All Organisms → cellular organisms → Bacteria2879Open in IMG/M
3300025941|Ga0207711_10192507All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300025986|Ga0207658_11597322All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300025993|Ga0208415_1032705Not Available514Open in IMG/M
3300026041|Ga0207639_10055496Not Available3032Open in IMG/M
3300026089|Ga0207648_10275243Not Available1505Open in IMG/M
3300026886|Ga0207982_1008417Not Available526Open in IMG/M
3300027288|Ga0208525_1017726Not Available815Open in IMG/M
3300027560|Ga0207981_1039605Not Available859Open in IMG/M
3300028589|Ga0247818_10838768Not Available643Open in IMG/M
3300028716|Ga0307311_10120214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium744Open in IMG/M
3300028718|Ga0307307_10221846Not Available601Open in IMG/M
3300028719|Ga0307301_10168668Not Available707Open in IMG/M
3300028744|Ga0307318_10146117Not Available811Open in IMG/M
3300028771|Ga0307320_10380673Not Available565Open in IMG/M
3300028811|Ga0307292_10016981All Organisms → cellular organisms → Bacteria2530Open in IMG/M
3300028814|Ga0307302_10243022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria882Open in IMG/M
3300028828|Ga0307312_10019949All Organisms → cellular organisms → Bacteria3806Open in IMG/M
3300028880|Ga0307300_10093710Not Available900Open in IMG/M
3300028889|Ga0247827_10306827Not Available929Open in IMG/M
3300031184|Ga0307499_10176054All Organisms → cellular organisms → Bacteria → Terrabacteria group644Open in IMG/M
3300031198|Ga0307500_10073636All Organisms → cellular organisms → Bacteria → Terrabacteria group872Open in IMG/M
3300031198|Ga0307500_10189868All Organisms → cellular organisms → Bacteria → Terrabacteria group608Open in IMG/M
3300031226|Ga0307497_10057802Not Available1385Open in IMG/M
3300031366|Ga0307506_10013192All Organisms → cellular organisms → Bacteria1886Open in IMG/M
3300031938|Ga0308175_103203534Not Available507Open in IMG/M
3300031939|Ga0308174_10265950Not Available1338Open in IMG/M
3300032074|Ga0308173_10859618Not Available837Open in IMG/M
3300033433|Ga0326726_11972899Not Available568Open in IMG/M
3300033502|Ga0326731_1034408Not Available1208Open in IMG/M
3300034090|Ga0326723_0014299All Organisms → cellular organisms → Bacteria3177Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere7.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.00%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil3.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005146Soil and rhizosphere microbial communities from Laval, Canada - mgHABEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005185Soil and rhizosphere microbial communities from Laval, Canada - mgHPBEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025993Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026886Soil and rhizosphere microbial communities from Laval, Canada - mgHAB (SPAdes)EnvironmentalOpen in IMG/M
3300027288Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033502Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fractionEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12060409533300002568SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTMVNATKERATAMRQRAQQAAVSQLQVATREDVARLQASLDRVEAALNDLAKRLPESKPRARRAPKPATPSD*
Ga0055455_1004472423300003990Natural And Restored WetlandsMDDRKSIIDRITGATEDTVARVQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRTRSRAPKPATPSD*
Ga0055453_1000265423300004006Natural And Restored WetlandsMDDRKNIIDRITGATEDTVARVQQEMSQSTVVTATKERATAMRQRAQQVAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRTRSRAPKPATPSD*
Ga0062589_10206249523300004156SoilMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0062595_10002456143300004479SoilMDRITGATEETVARVQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATREDVERLQASLDRIEAALNDLGKRLPESKPRPRSRAPKPATPSD*
Ga0062595_10169133523300004479SoilMDDRKSIIDRITGATEDTVARVQQEMSQNTVVNATKERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLPKRLPESKPRPRRAPK
Ga0062592_10217115513300004480SoilDTVQRMQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALSDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0066817_103244313300005146SoilDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPETKPRARTRAPKPPTPSD*
Ga0066815_1000985523300005164SoilMDDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPETKPRARTRAPKPPTPSD*
Ga0066869_1001557233300005165SoilMDDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARTRAPKPPTPSD*
Ga0066809_1001964013300005168SoilMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLPESKPRPRARAPKPATPSD*
Ga0066810_1006029323300005169SoilMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPESKPRARRAPKPATPSD*
Ga0066811_100083823300005185SoilMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERASAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPESKPRPRPRAPKPATPSD*
Ga0070670_10182301723300005331Switchgrass RhizosphereMDDRKNFIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRQRAQQAAMSQLQLATREDVERLQASLDRIEAALNDLGKRLPESKPRPRSRAPKPATPSD*
Ga0070666_1040503923300005335Switchgrass RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLRESKPRTRTRAPKPPTPSD*
Ga0068868_10021694833300005338Miscanthus RhizosphereYIELMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0068868_10138299423300005338Miscanthus RhizosphereMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARTRAPKPPTPSD*
Ga0070709_1056457323300005434Corn, Switchgrass And Miscanthus RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLKLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0066686_1069331623300005446SoilMDDRKSIIDRITGATEDTVARVQQEMSQNNVVNATKERASAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPASKPRPRSRASKPETPSK*
Ga0070662_10188592823300005457Corn RhizosphereVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0070699_10196152523300005518Corn, Switchgrass And Miscanthus RhizosphereDRKSIMDRITGATEETVARVQQEMSQNTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0073909_1028076223300005526Surface SoilAGPGGNHPREGTGKPSDAAGTLRFMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARTRAPKPPTPSD*
Ga0068864_10222394623300005618Switchgrass RhizosphereMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKP
Ga0075288_101325633300005874Rice Paddy SoilMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRTRSRAPKPATPRD*
Ga0075291_100694923300005884Rice Paddy SoilMDDRKNIIDRITGATEDTVARVQQEMSQSTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRTRSRAPKPATPRD*
Ga0075289_100756923300005888Rice Paddy SoilMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRIPESKPRTRTRAPKPPTPSD*
Ga0075289_101876613300005888Rice Paddy SoilRVQQEMSQSTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRTRSRAPKPATPRD*
Ga0066652_10004829233300006046SoilMDDRKSIIDRITGATDEAVQRVQQEMSQKTVVTATKERASAMRLRAQQAAMSQLQLATREDVARLQASLDRIEAAVNDLAKRLPESKPRTRSRAPKPATPSD*
Ga0074053_1195577213300006575SoilMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPESKPRPRPRAPKPATPSD*
Ga0074048_1319480613300006581SoilGVVGDAHRVGLAEADSQRDGGAAGPGGNHPREGTGKPSDAAGTLRFMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARTRAPKPPTPSD*
Ga0074064_1173490823300006603SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARARAPKPPTPSD*
Ga0074060_1184622923300006604SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPETKPRARTRAPKPPTPSD*
Ga0074062_1290903213300006606SoilARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARTRAPKPPTPSD*
Ga0075434_10056124823300006871Populus RhizosphereMDDRKNIIDRLTGATEGTVARVQQEMSQNTVVTSTKERASAMRQRAQQAAISQLHLATREDVARLQASLDRVEAALNDLAKRMPASKPRTRWRAPKPATPSD*
Ga0075424_10026331023300006904Populus RhizosphereMDDRKNIIDRLTGATEGTVARVQQEMSQNTVVTSTKERASAMRQRAQQAAISQLHLATREDVARLQASLDRVEAALNDLAKRMPASKPRTRSRAPKPATPSD*
Ga0079219_1014284423300006954Agricultural SoilMDDRKNIIDRITGATEETVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0111539_1083116523300009094Populus RhizosphereTGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0105249_1136557813300009553Switchgrass RhizosphereMDDRKSIIDRITGATEDTVARVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0134123_1252108623300010403Terrestrial SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPE
Ga0151489_138643723300011106SoilMDDRKSIIDRITGATEDTVARMQQEMSQSTVVNATKERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPESKPRPRPRAPKPATPSD*
Ga0151490_103397223300011107SoilMDDRKSIIDRITGATEDTVARMQQEMSQSTVVNATKERATAMRQRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLPESKPRPRARAPKPATPSD*
Ga0151490_126642013300011107SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPETKPRARTR
Ga0137371_1072177523300012356Vadose Zone SoilMDDDRKTIFDRISGATEETVARVQQEVSQSAVVNATRERAQAVRQRAQAAAVSQLQLATADDVARIQASLDRIEAAVSDLAKRIPEKPRPRPRASKPAQD*
Ga0137375_1121974713300012360Vadose Zone SoilMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERASAMRQRAQQAAMSQLQVATREDVARLQASLDRIEAAMNDLAKRLPERKPRPRSRAAKPSTPSD*
Ga0164301_1172264023300012960SoilMDDRKSIMDRITGATEDTVARVQQEMSQSTVVNATKERATAMRLRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLPESK
Ga0164309_1051770833300012984SoilMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRARTRAPKPPTPSD*
Ga0164308_1144082523300012985SoilMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASRDRVEAARNYLAKRLPESKPRTRTRAPKPPTPSD*
Ga0157374_1085553723300013296Miscanthus RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRPRSRAPKPATPSD*
Ga0157379_1093475513300014968Switchgrass RhizosphereRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0132258_1042640333300015371Arabidopsis RhizosphereMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPESKPRPRRAPKPATPSD*
Ga0132258_1335673323300015371Arabidopsis RhizosphereMDDRKNIIDRITGATEGTVARVQQEMSQNTVVTATKERATAMRLRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLAKRLPESKPRTRSRAPKPATPSD*
Ga0132257_10000937293300015373Arabidopsis RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQRTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD*
Ga0132257_10103557333300015373Arabidopsis RhizosphereMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPESKPR
Ga0132257_10144332913300015373Arabidopsis RhizosphereGYWKTVRGRWYIEFMDDRKSIKDRISGATEGTVQRVQQEMSQNTVVTATKERATAMRLRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLSKRLPESKPRTRSRAPKPATPSD*
Ga0132255_10043639323300015374Arabidopsis RhizosphereMDDRKSIKDRISGATEGTVQRVQQEMSQNTVVTATKERATAMRLRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLSKRLPESKPRARSRAPKPATPSD*
Ga0132255_10434256623300015374Arabidopsis RhizosphereMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPES
Ga0066669_1199501013300018482Grasslands SoilMDDRKSIIDRITGATEDTVARVQQEMSQNNVVNATKERASAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLAKRLPASKPRPRSRAS
Ga0206356_1127321613300020070Corn, Switchgrass And Miscanthus RhizosphereRWYIELMDDRKSIMDRITGATEETVARVQQEMSQNTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0206350_1161592413300020080Corn, Switchgrass And Miscanthus RhizosphereLMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0206354_1002087533300020081Corn, Switchgrass And Miscanthus RhizosphereTGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0206353_1112083313300020082Corn, Switchgrass And Miscanthus RhizosphereTEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0182009_1018046723300021445SoilMDRITGATEETVARVQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATREDVERLQASLDRIEAALNDLGKRLPESKPRPRSRAPKPATPSD
Ga0207656_1033258023300025321Corn RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0210142_103395333300025552Natural And Restored WetlandsMDDRKSIIDRITGATEDTVARVQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRTRSRAPKPATPSD
Ga0207642_1000432123300025899Miscanthus RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATATRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0207710_1075007713300025900Switchgrass RhizosphereITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0207680_1048053823300025903Switchgrass RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLRESKPRTRTRAPKPPTPSD
Ga0207647_1018286513300025904Corn RhizosphereTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0207649_1010104313300025920Corn RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPES
Ga0207686_1003900143300025934Miscanthus RhizosphereMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARTRAPKPPTPSD
Ga0207711_1019250733300025941Switchgrass RhizosphereYIELMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0207658_1159732223300025986Switchgrass RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPS
Ga0208415_103270523300025993Rice Paddy SoilMDDRKNIIDRITGATEDTVARVQQEMSQSTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRTRSRAPKPATPRD
Ga0207639_1005549613300026041Corn RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLEKRRLHA
Ga0207648_1027524333300026089Miscanthus RhizosphereMDDRKNIIDRITGATEDTVQRVQQEMSQSTVVTATKEWATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0207982_100841723300026886SoilDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPETKPRARTRAPKPPTPSD
Ga0208525_101772633300027288SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPET
Ga0207981_103960513300027560SoilMDDRKSIIDRITGATEDTVARVQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLPESKPRPRARAPKPATPSD
Ga0247818_1083876813300028589SoilMDRITGATEDTVARVQQEMSQSTVVNATKERATAMRLRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLPESKPRARTRAPKPPTPSD
Ga0307311_1012021423300028716SoilMDDRKSIIDRITGATEDTVSRMQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRSRAPKPATPSD
Ga0307307_1022184613300028718SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLNKRLPESKPRARRAPKPATPSD
Ga0307301_1016866813300028719SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATKERATAMRQRAQQAAVSQLQVATRDDVARLQASLDRVEAALNDLNKRLPESKPRARRAPKPATPSD
Ga0307318_1014611723300028744SoilMDDRKNIIDRITGVTEETVARVQQEMSQSTVVNATRERATAMRQRAQQAAVSQLQVATREDVARLQASLDRVEAALNDLTKRLPQSKPRTRSRASKPATPTD
Ga0307320_1038067323300028771SoilRITGVTEETVARVQQEMSQSTVMNATRERATAMRQRAQQAAVSQLQVATREDVARLQASLDRVEAALNDLTKRLPQSKPRTRSRASKPATPTD
Ga0307292_1001698113300028811SoilMDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATKERATAMRQRAQQAAVSQLQVATRDDVARLQASLDRVEAALNDLNKRLPESKPRARR
Ga0307302_1024302223300028814SoilMDDRKNIIDRITGVTEETVARVQQEMSQSTVMNATRERATAMRQRAQQAAASQLQVATREDVARLQASLDRVEAALNDLTKRLPQSKPRTRSRASKPATPTD
Ga0307312_1001994933300028828SoilMDDPKSIIDRITGATEETVARVQQEMSQSTVVNATRERATAMRQRAQQAAMSQLQVATREDVARLQASLDRVEAALNDLTKRLPETKPRTRSRAPKPTPPSD
Ga0307300_1009371033300028880SoilMDDRKNIIDRITGVTEETVARVQQEMSQSTVMNATRERATAMRQRAQQAAVSQLQVATREDVARLQASLDRVEAALNDLNKRLPESKPRARRAPKPATPSD
Ga0247827_1030682713300028889SoilMDDRKNIIDRITGATEDTVQRVQQEMSQRTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLHASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0307499_1017605413300031184SoilIIDRITGATEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0307500_1007363613300031198SoilPSDAAGTLRFMDDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPETKPRARTRAPKPPTPSD
Ga0307500_1018986823300031198SoilEDTVQRVQQEMSQSTVVTATKERATAMRLRAQQAAMSQLQLATRDDVARLQASLDRVEAALNDLAKRLPESKPRTRTRAPKPPTPSD
Ga0307497_1005780233300031226SoilMDDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPESKPRARTRAPKPPTPSD
Ga0307506_1001319223300031366SoilMDDDRKSIIDRITGATEDTVARVQQEMSQSTVVNATRERATSMRQRAQQAAVSQLQVATREDVARLQASLDRIEAALNDLTKRLPETKPRARTRAPKPPTPSD
Ga0308175_10320353413300031938SoilDRITGATEETVARVQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATREDVERLQASLDRIEAALNDLGKRLPESKPRPRSRAPKPATPSD
Ga0308174_1026595033300031939SoilMDRITGATEETVARVQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRPRSRAPKPPTPSD
Ga0308173_1085961813300032074SoilMDRITGATEETVARVQQEMSQNTVVTATKERATAMRQRAQQAAMSQLQLATREDVARLQASLDRVEAALNDLGKRLPESKPRPRSRAPK
Ga0326726_1197289923300033433Peat SoilGRWYIEVMDDRKSIIDRITGATEDTVARMQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLPESKPRPRARAPKPATPSD
Ga0326731_103440833300033502Peat SoilMDDRKSIIDRITGATEDTVARMQQEMSQRTVVNATKERATAMRQRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLP
Ga0326723_0014299_1365_16733300034090Peat SoilMDDRKSIIDRITGATEDTVARMQQEMSQSTVVNATKERATAMRQRAQQAAMSQLQVATRDDVARLQASLDRVEAALNDLAKRLPESKPRPRARAPKPATPSD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.