NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104987

Metagenome / Metatranscriptome Family F104987

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104987
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 69 residues
Representative Sequence MSKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHEELEIP
Number of Associated Samples 91
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 2.00 %
% of genes near scaffold ends (potentially truncated) 99.00 %
% of genes from short scaffolds (< 2000 bps) 94.00 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (50.000 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(30.000 % of family members)
Environment Ontology (ENVO) Unclassified
(55.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(78.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 17.91%    β-sheet: 0.00%    Coil/Unstructured: 82.09%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01370Epimerase 46.00
PF16363GDP_Man_Dehyd 3.00
PF13489Methyltransf_23 2.00
PF13419HAD_2 2.00
PF05711TylF 1.00
PF07460NUMOD3 1.00
PF01878EVE 1.00
PF13673Acetyltransf_10 1.00
PF14602Hexapep_2 1.00
PF05704Caps_synth 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1673Predicted RNA-binding protein, contains PUA-like EVE domainGeneral function prediction only [R] 1.00
COG2947Predicted RNA-binding protein, contains EVE domainGeneral function prediction only [R] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.00 %
UnclassifiedrootN/A21.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000243|SA_S2_NOR18_50mDRAFT_1018682Not Available1278Open in IMG/M
3300000929|NpDRAFT_10334868All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis751Open in IMG/M
3300001348|JGI20154J14316_10132225All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis712Open in IMG/M
3300001352|JGI20157J14317_10095299All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1095Open in IMG/M
3300001460|JGI24003J15210_10094617All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis869Open in IMG/M
3300001472|JGI24004J15324_10066163All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1021Open in IMG/M
3300001589|JGI24005J15628_10082827All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1123Open in IMG/M
3300002482|JGI25127J35165_1111762All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis544Open in IMG/M
3300005601|Ga0070722_10338115All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes651Open in IMG/M
3300005931|Ga0075119_1072083Not Available804Open in IMG/M
3300006735|Ga0098038_1073604Not Available1205Open in IMG/M
3300006793|Ga0098055_1375628All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium527Open in IMG/M
3300006810|Ga0070754_10311397All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174704Open in IMG/M
3300006867|Ga0075476_10234537All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis659Open in IMG/M
3300006921|Ga0098060_1182632All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis576Open in IMG/M
3300006925|Ga0098050_1150262All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium586Open in IMG/M
3300007516|Ga0105050_10031846Not Available4250Open in IMG/M
3300007538|Ga0099851_1315912All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis549Open in IMG/M
3300007541|Ga0099848_1009434All Organisms → Viruses → Predicted Viral4335Open in IMG/M
3300007542|Ga0099846_1113915All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus990Open in IMG/M
3300007637|Ga0102906_1039494All Organisms → Viruses → Predicted Viral1387Open in IMG/M
3300007758|Ga0105668_1217310All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis663Open in IMG/M
3300008470|Ga0115371_10323265All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174609Open in IMG/M
3300009149|Ga0114918_10555834All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300009173|Ga0114996_10776133All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis696Open in IMG/M
3300009425|Ga0114997_10617263All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis570Open in IMG/M
3300009428|Ga0114915_1199514All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis551Open in IMG/M
3300009432|Ga0115005_11258450All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis603Open in IMG/M
3300009434|Ga0115562_1178928All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis772Open in IMG/M
3300009436|Ga0115008_10407238All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis966Open in IMG/M
3300009436|Ga0115008_10866579Not Available666Open in IMG/M
3300009440|Ga0115561_1400488All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus502Open in IMG/M
3300009512|Ga0115003_10291744All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis967Open in IMG/M
3300010148|Ga0098043_1057156All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1184Open in IMG/M
3300010299|Ga0129342_1173186Not Available777Open in IMG/M
3300010392|Ga0118731_100959891All Organisms → Viruses → Predicted Viral1074Open in IMG/M
3300010430|Ga0118733_100076163All Organisms → cellular organisms → Bacteria6854Open in IMG/M
3300010430|Ga0118733_102210861All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1092Open in IMG/M
3300013010|Ga0129327_10033690Not Available2624Open in IMG/M
3300017714|Ga0181412_1079648All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium790Open in IMG/M
3300017727|Ga0181401_1081951All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium839Open in IMG/M
3300017741|Ga0181421_1139582Not Available627Open in IMG/M
3300017746|Ga0181389_1100888All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium795Open in IMG/M
3300017778|Ga0181349_1139719All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus879Open in IMG/M
3300017968|Ga0181587_11019490All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174506Open in IMG/M
3300018039|Ga0181579_10478737All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis660Open in IMG/M
3300018428|Ga0181568_10896164All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis681Open in IMG/M
3300020054|Ga0181594_10307484All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174719Open in IMG/M
3300020174|Ga0181603_10241768All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis724Open in IMG/M
3300020191|Ga0181604_10227321All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium888Open in IMG/M
3300020274|Ga0211658_1071899All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis699Open in IMG/M
3300020810|Ga0181598_1359386All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis500Open in IMG/M
3300021364|Ga0213859_10426823All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis584Open in IMG/M
3300021365|Ga0206123_10458890All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis515Open in IMG/M
3300021373|Ga0213865_10419861All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis589Open in IMG/M
3300021378|Ga0213861_10203587All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1077Open in IMG/M
3300021505|Ga0190327_1009686All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1303Open in IMG/M
(restricted) 3300023112|Ga0233411_10259007All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis580Open in IMG/M
3300023176|Ga0255772_10601658Not Available508Open in IMG/M
3300023296|Ga0222664_1037241Not Available873Open in IMG/M
3300023702|Ga0232119_1010351Not Available1437Open in IMG/M
3300024183|Ga0228603_1003500Not Available1880Open in IMG/M
3300024183|Ga0228603_1046741All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis657Open in IMG/M
3300024191|Ga0228636_1015941All Organisms → Viruses → Predicted Viral1847Open in IMG/M
3300024231|Ga0233399_1000665Not Available12767Open in IMG/M
3300024242|Ga0228673_1105951All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis502Open in IMG/M
3300024293|Ga0228651_1014989All Organisms → Viruses → Predicted Viral1979Open in IMG/M
3300024296|Ga0228629_1132570All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis655Open in IMG/M
3300024313|Ga0228624_1021364All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1485Open in IMG/M
3300024319|Ga0228670_1059468All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis840Open in IMG/M
3300025102|Ga0208666_1039562All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1376Open in IMG/M
3300025108|Ga0208793_1200399All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis500Open in IMG/M
3300025127|Ga0209348_1108499All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis855Open in IMG/M
3300025137|Ga0209336_10050814Not Available1289Open in IMG/M
3300025137|Ga0209336_10061177Not Available1139Open in IMG/M
3300025137|Ga0209336_10073983All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1005Open in IMG/M
3300025137|Ga0209336_10194184All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis504Open in IMG/M
3300025138|Ga0209634_1137960All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1015Open in IMG/M
3300025647|Ga0208160_1110851All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus702Open in IMG/M
3300025653|Ga0208428_1118541All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus731Open in IMG/M
3300025849|Ga0209603_1277562All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus596Open in IMG/M
3300025881|Ga0209309_10483255Not Available517Open in IMG/M
3300027752|Ga0209192_10092021Not Available1268Open in IMG/M
3300027780|Ga0209502_10047175Not Available2393Open in IMG/M
3300027780|Ga0209502_10462655All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis506Open in IMG/M
3300027788|Ga0209711_10088391Not Available1594Open in IMG/M
3300027788|Ga0209711_10119483All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1305Open in IMG/M
3300027813|Ga0209090_10225360All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis957Open in IMG/M
3300028133|Ga0228609_1050833All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1131Open in IMG/M
3300028297|Ga0228617_1114568All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis641Open in IMG/M
3300028397|Ga0228639_1130742All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis600Open in IMG/M
3300028419|Ga0228625_1026849All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis1389Open in IMG/M
3300031510|Ga0308010_1332930Not Available513Open in IMG/M
3300031621|Ga0302114_10290237All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis646Open in IMG/M
3300031656|Ga0308005_10028151All Organisms → Viruses → Predicted Viral1484Open in IMG/M
3300031673|Ga0307377_11048298All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis544Open in IMG/M
3300031683|Ga0308006_10121391Not Available805Open in IMG/M
3300031683|Ga0308006_10278553All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis523Open in IMG/M
3300034116|Ga0335068_0441251All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174614Open in IMG/M
3300034375|Ga0348336_095600All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Atlauavirus1024Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine30.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater17.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous8.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh8.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine4.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.00%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment3.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.00%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean1.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.00%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater1.00%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine1.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.00%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine1.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.00%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine1.00%
Hydrothermal Vent SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Hydrothermal Vent Sediment1.00%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake1.00%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.00%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.00%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000243Svalbard Archipelago station 2 sample NOR 18_50mEnvironmentalOpen in IMG/M
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300005601Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1EnvironmentalOpen in IMG/M
3300005931Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300007516Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007637Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02EnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018039Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020054Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020274Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)EnvironmentalOpen in IMG/M
3300020810Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021505Hydrothermal vent sediment bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4872-04-0-1_MGEnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300023296Saline water microbial communities from Ace Lake, Antarctica - #604EnvironmentalOpen in IMG/M
3300023702Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 82R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024183Seawater microbial communities from Monterey Bay, California, United States - 3DEnvironmentalOpen in IMG/M
3300024191Seawater microbial communities from Monterey Bay, California, United States - 45DEnvironmentalOpen in IMG/M
3300024231Seawater microbial communities from Monterey Bay, California, United States - 43DEnvironmentalOpen in IMG/M
3300024242Seawater microbial communities from Monterey Bay, California, United States - 91DEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024296Seawater microbial communities from Monterey Bay, California, United States - 36DEnvironmentalOpen in IMG/M
3300024313Seawater microbial communities from Monterey Bay, California, United States - 29DEnvironmentalOpen in IMG/M
3300024319Seawater microbial communities from Monterey Bay, California, United States - 85DEnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027780Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300028133Seawater microbial communities from Monterey Bay, California, United States - 10DEnvironmentalOpen in IMG/M
3300028297Seawater microbial communities from Monterey Bay, California, United States - 18DEnvironmentalOpen in IMG/M
3300028397Seawater microbial communities from Monterey Bay, California, United States - 50DEnvironmentalOpen in IMG/M
3300028419Seawater microbial communities from Monterey Bay, California, United States - 30DEnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031656Marine microbial communities from water near the shore, Antarctic Ocean - #67EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031683Marine microbial communities from water near the shore, Antarctic Ocean - #69EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SA_S2_NOR18_50mDRAFT_101868213300000243MarineMNKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPEVPMYRLDHEE
NpDRAFT_1033486823300000929Freshwater And MarineMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKKT
JGI20154J14316_1013222513300001348Pelagic MarineMSKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVNSVCP
JGI20157J14317_1009529923300001352Pelagic MarineMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEVDY
JGI24003J15210_1009461723300001460MarineMKKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFERVDFVNSVCPC
JGI24004J15324_1006616323300001472MarineMKKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIXDYWPDVPMYRIDHEELDIPNQTFERVDFVNSVCPCAG
JGI24005J15628_1008282713300001589MarineMKKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFERVDFVNSVC
JGI25127J35165_111176213300002482MarineMSKELKWGTIIPLIGGSAIGCKNSAGNEPAFHLSYDAFAANESHIEKYWPDVPMYRLDHEDLEIPNQTFNEVDYVNSVCP
Ga0070722_1033811513300005601Marine SedimentMNKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRLDHEELDIP
Ga0075119_107208313300005931Saline LakeMKKEKELKYGTIIPLIGGSAIGCSLATGNLPAFHLSYEAFAANESHIEGYWPDVPMYRLDHDELD
Ga0098038_107360423300006735MarineMSKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHEELDIPNKT
Ga0098055_137562823300006793MarineMSKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHEELEIP
Ga0070754_1031139713300006810AqueousMSKEIKWGTIIPLIGGSAIGCKKSTGNEPAFHLSYDAFAANESHIERYWPDVPMYRLDHE
Ga0075476_1023453723300006867AqueousMSKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIERYWPDVPMYRLDHEELEIPNQTFEGVDYVNSVCP
Ga0098060_118263213300006921MarineMGKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPDVPMYRLDHEDLDIPKQTFN
Ga0098050_115026223300006925MarineMSKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHEELEIPNQTFE
Ga0105050_1003184613300007516FreshwaterMSKEKELKWGTIIPLIGGSAIGSSKATGNLPEFHLSYDAFAANESHIERYWPDIPMYRLDHED
Ga0099851_131591213300007538AqueousMNKKNKELKWGTIIPLIGGSAIGCSRSAESKPSFHLSYETFAANESHIEKYWAGIPMYRLDAPDI
Ga0099848_100943413300007541AqueousMSKNLKWGTIIPLIGGSAIGCSRSAGTLPEFHLSYEAFSANESHIEKYWDNVPMFRLDSDDLAIPDKTIEGV
Ga0099846_111391513300007542AqueousMSKELKWGTIIPLIGGSAIGCSKSTGNEPSFHLSYDAFAANESHIERYWPDVPMYRLDHEDLEIPGETFEGV
Ga0102906_103949413300007637EstuarineMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKKTFQEVDY
Ga0105668_121731023300007758Background SeawaterMKKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIP
Ga0115371_1032326513300008470SedimentMNKEKDKELKWGTIVPLIGGSAIGSSKATGNLPEFHLSYDAFAANESHIERYWPDVPMYR
Ga0114918_1055583413300009149Deep SubsurfaceMQKIKTKNMNKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHEDLDIP
Ga0114996_1077613313300009173MarineMKKEKELKWGTIIPLIGGSAIGSSKATGNLPEFHLSYDAFAANESHIERYWPDVPMYRLDHEDLEI
Ga0114997_1061726323300009425MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMY
Ga0114915_119951423300009428Deep OceanMSKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEDFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVNSVC
Ga0115005_1125845023300009432MarineMNKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIENYWPDVPMYRLDHEELDIPNQTFEQVDFV
Ga0115562_117892813300009434Pelagic MarineMSKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVNSVCPCAGLSQ
Ga0115008_1040723813300009436MarineMSKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPM
Ga0115008_1086657913300009436MarineMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDINKQTYNEVEYVNSV*
Ga0115561_140048813300009440Pelagic MarineMNKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRLDHEELD
Ga0115003_1029174413300009512MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDF
Ga0098043_105715623300010148MarineMSKELKWGTIIPLIGGSAIGCKNSAGNEPAFHLSYDAFSANESHIEKYWPEVPMYRLDHEDLEIPNQTFNEVDYVNSVCPC
Ga0129342_117318623300010299Freshwater To Marine Saline GradientMSKNLKWGTIIPLIGGSAIGCSRSAGTLPEFHLSYEAFSANESHIEKYWDNVPMFRLDSDDLAIPDKT
Ga0118731_10095989123300010392MarineMKKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPEVPMY
Ga0118733_10007616393300010430Marine SedimentMDKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPEVPMYRLDHEE
Ga0118733_10221086123300010430Marine SedimentMKKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPEVPMYRLDHEE
Ga0129327_1003369043300013010Freshwater To Marine Saline GradientMNKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRLDHEELDIPNQTFEQVDFV
Ga0181412_107964823300017714SeawaterMSKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFE
Ga0181401_108195123300017727SeawaterMDKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHEELE
Ga0181421_113958213300017741SeawaterMSKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRIDHEE
Ga0181389_110088823300017746SeawaterMSKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHE
Ga0181349_113971923300017778Freshwater LakeMNKEIKWGTIIPLIGGSAIGCSRSAESKPLFHLSYEAFAANESHIERYWEGIPMYRLDAPNLEIPSST
Ga0181587_1101949023300017968Salt MarshMSKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYEAFAANESHIERYWPDVPM
Ga0181579_1047873723300018039Salt MarshMSKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYEAFAANESHIEKYWPDIPMYRLDHEDLEIP
Ga0181568_1089616423300018428Salt MarshMSKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYEAFAANESHIERYWPEVPMYRLDHEDVEIPNQTFEGVDYVNS
Ga0181594_1030748423300020054Salt MarshMSKEIKWGTIIPLIGGSAIGCKKSTGNEPAFHLSYDAFAANESHIERYWPDVPMY
Ga0181603_1024176823300020174Salt MarshMSKELKWGTIIPLIGGSAIGCKKSAGVDPAFHLSYEAFAANESHIEKYWPDVPMYRLDHEDLEIPNQTFEEVDY
Ga0181604_1022732113300020191Salt MarshMSKELKWGTIIPLIGGSAIGCKKSAGVDPAFHLSYEAFAANESHIEKYWPDVPMYRLDHEDLEIPNQTFNEV
Ga0211658_107189913300020274MarineMSKELKWGTIIPLIGGSAIGCKNSAGNEPAFHLSYDAFSANESHIEKYWPEVPMYRLDHEDLEIPNQTFNEVDYVNSVCPCAGLSQ
Ga0181598_135938623300020810Salt MarshMSKELKWGTIIPLIGGSAIGCKKSAGVDPAFHLSYEAFAANESHIEKYWPDVPMYRLDHEDLEIPNQTFEEVDYVNSVCP
Ga0213859_1042682313300021364SeawaterMSKELKWGTIIPLIGGSAIGCKKSAGNDPAFHLSYDAFAANESHIEKYWPDVPMY
Ga0206123_1045889013300021365SeawaterMSKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVNSVCPCAGL
Ga0213865_1041986123300021373SeawaterMSKELKWGTIIPLIGGSAIGCKNSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLEIPNQTFNE
Ga0213861_1020358713300021378SeawaterMSKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIERYWPDVPMYRLDHEELEIPNQTFEGVDYVNSVCPCAGL
Ga0190327_100968613300021505Hydrothermal Vent SedimentMSKELKWGTIIPLIGGSAIGCKKSAGVDPAFHLSYEAFAANESHIEKYWPDVPMYRLDHEDLEIPNQTFNEVDYVNSVCPCAGLS
(restricted) Ga0233411_1025900723300023112SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHE
Ga0255772_1060165823300023176Salt MarshMSKEIKWGTIIPLIGGSAIGCSKSTGNQPSFHLSYDAFAANESHIEKYWPDVPM
Ga0222664_103724113300023296Saline WaterMNKKTKIKKEMKYGTIIPLIGGSAIGCSLATGNLPAFHLSYEAFAANESHIEGYWPDVPMYRLDHDELDIP
Ga0232119_101035133300023702SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEVD
Ga0228603_100350013300024183SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEV
Ga0228603_104674113300024183SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRL
Ga0228636_101594113300024191SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEVDYVNSVCPCAGLS
Ga0233399_100066513300024231SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPM
Ga0228673_110595113300024242SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPDVPMYRLDHEDLDIPKQ
Ga0228651_101498933300024293SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDH
Ga0228629_113257023300024296SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEVDYVNSVCPC
Ga0228624_102136413300024313SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNE
Ga0228670_105946813300024319SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEVDYVNS
Ga0208666_103956223300025102MarineMSKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRLDHEELDIP
Ga0208793_120039923300025108MarineMSKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYR
Ga0209348_110849923300025127MarineMSKELKWGTIIPLIGGSAIGCKKSAGVDPAFHLSYEAFAANESHIEKYWPDVPMYRL
Ga0209336_1005081413300025137MarineMKKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPM
Ga0209336_1006117733300025137MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPM
Ga0209336_1007398313300025137MarineMSKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFERVDFVNSVCPCAG
Ga0209336_1019418413300025137MarineMKKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFERVDFVNSVCPCAG
Ga0209634_113796013300025138MarineMSKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVNS
Ga0208160_111085123300025647AqueousMSKELKWGTIIPLIGGSAIGCSKSTGNEPSFHLSYDAFAANESHIERYWPDVPMYRLDHEDL
Ga0208428_111854123300025653AqueousMSKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIERYWPDVPMYRLDHEELEIPNQTF
Ga0209603_127756223300025849Pelagic MarineMNKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRL
Ga0209309_1048325523300025881Pelagic MarineMNKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYDAFAANESHIEDYWPDVPMYRLDHEELDIPNQTFEQVD
Ga0209192_1009202123300027752MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQT
Ga0209502_1004717513300027780MarineMNKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPEVPMYRLDHEELDIPDQTFEQVDFVNSVCP
Ga0209502_1046265523300027780MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVNSVCPCAGLS
Ga0209711_1008839113300027788MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVN
Ga0209711_1011948313300027788MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRIDHEELDIPNQTFEQVDFVNSVCP
Ga0209090_1022536013300027813MarineMNKEKELKWGTMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMYRID
Ga0228609_105083323300028133SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEVDYVNSVCPCA
Ga0228617_111456823300028297SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKKTFQEVDYVNSVCPCAGL
Ga0228639_113074213300028397SeawaterMGKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPDVPMYRLDHEDLDIPKQTFNEV
Ga0228625_102684933300028419SeawaterMEKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIEKYWPEVPMYRLDHEDLDIPKQTFNEVDYVNSV
Ga0308010_133293013300031510MarineMNKEKELKWGTIIPLIGGSAIGSSKATGNLPAFHLSYEAFAANESHIEGYWPDVPM
Ga0302114_1029023713300031621MarineMNKEKELKWGTIIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPEVPMYRLDHEELDIPDQTFEQVDFV
Ga0308005_1002815133300031656MarineMNKEKELKWGTIIPLIGGSAIGSSKATGNLPAFHLSYEAFAANESHIEGYWPDVPMY
Ga0307377_1104829813300031673SoilMKKEKELKWGTIIPLIGGSAIGSSKATGNLPEFHLSYDAFAANESHIERYWPDVPMYRLDHEDL
Ga0308006_1012139123300031683MarineMNKEKELKWGTIIPLIGGSAIGSSKATGNLPAFHLSYEAFAANESHIEGYWPDVPMYRLDHDELDIPENTFEQV
Ga0308006_1027855323300031683MarineMKKEKELKWATMIPLIGGSAIGCNKATGNLPAFHLSYEAFAANESHIEDYWPDVPMY
Ga0335068_0441251_446_6133300034116FreshwaterMSKEIKWGTIIPLIGGSAIGCSRSAETKPAFHLSYEAFAANESHIERYWEGIPMYR
Ga0348336_095600_1_1893300034375AqueousMSKELKWGTIIPLIGGSAIGCKKSAGNEPAFHLSYDAFAANESHIERYWPDVPMYRLDHEELE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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