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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F103567 |
| Family Type | Metagenome |
| Number of Sequences | 101 |
| Average Sequence Length | 113 residues |
| Representative Sequence | MLTLVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLFTQTPHQKSTQLN |
| Number of Associated Samples | 94 |
| Number of Associated Scaffolds | 101 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 11.88 % |
| % of genes near scaffold ends (potentially truncated) | 61.39 % |
| % of genes from short scaffolds (< 2000 bps) | 84.16 % |
| Associated GOLD sequencing projects | 88 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (76.238 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.832 % of family members) |
| Environment Ontology (ENVO) | Unclassified (32.673 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (55.446 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 12.26% β-sheet: 24.53% Coil/Unstructured: 63.21% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 101 Family Scaffolds |
|---|---|---|
| PF13458 | Peripla_BP_6 | 3.96 |
| PF13467 | RHH_4 | 1.98 |
| PF08241 | Methyltransf_11 | 1.98 |
| PF13400 | Tad | 0.99 |
| PF01548 | DEDD_Tnp_IS110 | 0.99 |
| PF10009 | DUF2252 | 0.99 |
| PF06736 | TMEM175 | 0.99 |
| PF13924 | Lipocalin_5 | 0.99 |
| PF09994 | DUF2235 | 0.99 |
| COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
|---|---|---|---|
| COG3547 | Transposase | Mobilome: prophages, transposons [X] | 0.99 |
| COG3548 | Uncharacterized membrane protein | Function unknown [S] | 0.99 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 76.24 % |
| All Organisms | root | All Organisms | 23.76 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 16.83% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 7.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 6.93% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.93% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 4.95% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.96% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 3.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 3.96% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.96% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.97% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.97% |
| Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 2.97% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.97% |
| Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 2.97% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.97% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 1.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.99% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.99% |
| Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.99% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.99% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.99% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.99% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.99% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005185 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPB | Environmental | Open in IMG/M |
| 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
| 3300006178 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Host-Associated | Open in IMG/M |
| 3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009166 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012478 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610 | Host-Associated | Open in IMG/M |
| 3300012508 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510 | Host-Associated | Open in IMG/M |
| 3300012510 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610 | Host-Associated | Open in IMG/M |
| 3300012515 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610 | Host-Associated | Open in IMG/M |
| 3300012519 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610 | Environmental | Open in IMG/M |
| 3300012884 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 | Environmental | Open in IMG/M |
| 3300012885 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 | Environmental | Open in IMG/M |
| 3300012891 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2 | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012899 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2 | Environmental | Open in IMG/M |
| 3300012902 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1 | Environmental | Open in IMG/M |
| 3300012908 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1 | Environmental | Open in IMG/M |
| 3300012909 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1 | Environmental | Open in IMG/M |
| 3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
| 3300012912 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2 | Environmental | Open in IMG/M |
| 3300012916 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2 | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300022886 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5 | Environmental | Open in IMG/M |
| 3300023072 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6 | Environmental | Open in IMG/M |
| 3300023168 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5 | Environmental | Open in IMG/M |
| 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026651 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300026807 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300026873 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027438 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3a-11 (SPAdes) | Environmental | Open in IMG/M |
| 3300027471 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027617 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027723 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027821 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
| 3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
| 3300031248 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5 | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031940 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2 | Environmental | Open in IMG/M |
| 3300032003 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1 | Environmental | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
| 3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Host-Associated | Open in IMG/M |
| 3300034818 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 | Host-Associated | Open in IMG/M |
| 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| Ga0062593_1003700231 | 3300004114 | Soil | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0062590_1025230031 | 3300004157 | Soil | DGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN* |
| Ga0062595_1002150131 | 3300004479 | Soil | MLSMLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN* |
| Ga0066811_10107801 | 3300005185 | Soil | MLTLVSASKADNRDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDSPSSTVDRGYAATREQAMAGFEAQWLRLPKSVEKERAPETIRPRLFTQTPHQKSTQLN* |
| Ga0065704_103890971 | 3300005289 | Switchgrass Rhizosphere | MLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN* |
| Ga0065707_108639672 | 3300005295 | Switchgrass Rhizosphere | DQADVTNWPESALVCLPMLTLVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDSPSNTVDRGYAATHEQAMADFEAQWLRLPRSVEKERASGTIRPRLFTQTPHQKSTQLN* |
| Ga0070690_1016033001 | 3300005330 | Switchgrass Rhizosphere | RSLTRPMSPIGQNTALVCFSMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0070660_1001627372 | 3300005339 | Corn Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIHPRLFTQTPHKKLRS* |
| Ga0070689_1021813201 | 3300005340 | Switchgrass Rhizosphere | GQNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0070668_1006462542 | 3300005347 | Switchgrass Rhizosphere | CLVSMLHQSRQRHLLTRPMSPIGYRFICFPMLTLVSASKADNRDSFAVFDGEDCVGHIMRTHKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0070659_1018099371 | 3300005366 | Corn Rhizosphere | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQ |
| Ga0070703_104629541 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | LTRPMSPIGQNTALVCFSMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMAEFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0070701_109241711 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MLTLVSASKAENRDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0070700_1007857652 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIRPRLFTQTPHQKTTQLN* |
| Ga0070694_1001893281 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIRPRLFTQTPHQKTTQLN* |
| Ga0070686_1006889161 | 3300005544 | Switchgrass Rhizosphere | VSMLHQSRQRHLLTRPMSPIGYRFICFPMLTLVSASKADNRDSFAVFDGEDCVGHIMRTHKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0070693_1006103091 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | PMSPIGQNTALVCFSMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0070693_1015423501 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | VTKWPEYRFRMLSMLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIHPRLFTQTPHKKLRS* |
| Ga0068855_1016362902 | 3300005563 | Corn Rhizosphere | MLHQSRQRHLLTRPMSPIGYRFICFPMLTLVSASKADNRDSFAVFDGEDCVGHIMRTHKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKESLGDHPPEARYADATPKKYAAKLIRSELFPKSEHGSFWYYGEYSTTGIPFSAV |
| Ga0068852_1019084681 | 3300005616 | Corn Rhizosphere | KSNSGIAALPPIATPIGQNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0068859_1006005902 | 3300005617 | Switchgrass Rhizosphere | MLTLVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0066905_1020328871 | 3300005713 | Tropical Forest Soil | MLTLVSASKANNPDSFAVFDGDDCVGHVMRTQKSPPGKPWFWTIFVSDRHNSTVDRGYAATREQALADFEAVWPRSLEKERASGIIRPRLFTQTPHQKSTQLD* |
| Ga0068861_1003472551 | 3300005719 | Switchgrass Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN* |
| Ga0068870_111138012 | 3300005840 | Miscanthus Rhizosphere | MLTLVSASKADNRDSFAVFDGEDCVGHIMRTHKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0075367_108685741 | 3300006178 | Populus Endosphere | MLTLVSASKVDNPDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSGGPSVTVDRGYAATREQAMAEFEAQWLRLPRSVKKQRAPETIRPRLFTQTPHQKKYAAK |
| Ga0075422_103110691 | 3300006196 | Populus Rhizosphere | GQNTALVCFSMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0075425_1002391343 | 3300006854 | Populus Rhizosphere | MSPIGQNTALVCLQMLTLVSASKVDNPDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMAEFEAQWLRLPRSVKKQRAPETIRPRLFTQTPHQKKYAAKLIRS* |
| Ga0075434_1005849111 | 3300006871 | Populus Rhizosphere | TRGLPRIDCSGVATNPGNQFRQRHSLVRPMSPIGQNTALVCLQMLTLVSASKVDNPDSLSVFDREDCVGHIMRTQKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMAEFEAQWLRLPRSVKKQRAPETIRPRLFTQTPHQKKYAAKLIRS* |
| Ga0075435_1000456365 | 3300007076 | Populus Rhizosphere | GNQFRQRHSLVRPMSPIGQNTALVCLQMLTLVSASKVDNPDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSGGPSVTVDRGYAATREQAMAEFEAQWLRLPRSVKKQRAPETIRPRLFTQTPHQKKYAAKLIRS* |
| Ga0105245_126744391 | 3300009098 | Miscanthus Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIHPRLFTQTPHKKL |
| Ga0105100_102474252 | 3300009166 | Freshwater Sediment | MLTLVSASKADNRDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEALWLRLLRSPQTPHQKSTQPN* |
| Ga0105241_106683771 | 3300009174 | Corn Rhizosphere | MSPIGQNTVLVCSPMLTLVSASKADNPDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDNPSNTVDRGYAATSEQAMANFEAQLLRLPRSVEKEKASRSISPEALYADATKKVRS* |
| Ga0105248_120319901 | 3300009177 | Switchgrass Rhizosphere | PPIATPIGQNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0134128_102166421 | 3300010373 | Terrestrial Soil | IATPIGQNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0134124_113824861 | 3300010397 | Terrestrial Soil | AALPPIATPIGQNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDSPSNTVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0134127_102389471 | 3300010399 | Terrestrial Soil | MLTLVSASKADNRDSFAVFDGEDCVGHIMRTHKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERAPGGCPPGLFTQTPHQKSTQLN* |
| Ga0105246_111364171 | 3300011119 | Miscanthus Rhizosphere | SPMLTLVSASKADNPDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0157328_10145361 | 3300012478 | Arabidopsis Rhizosphere | RAVRVTKWPEYRFSMLSMLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN* |
| Ga0157315_10494271 | 3300012508 | Arabidopsis Rhizosphere | LVSASKADNCDSLAMFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0157316_10174861 | 3300012510 | Arabidopsis Rhizosphere | DSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0157338_10931461 | 3300012515 | Arabidopsis Rhizosphere | LAINSESGTRSLTRPMSPIGQNTALVCFSMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0157352_10380251 | 3300012519 | Unplanted Soil | VFDGDDCVGHIMSTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQAMADFEVQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0157300_10297871 | 3300012884 | Soil | DNRDSFAVFDGEDCVGHIMRTHKSPPGKPWFWTIFVSDSPSNTVDRGYAATHEQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0157287_10863352 | 3300012885 | Soil | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIR |
| Ga0157305_101066831 | 3300012891 | Soil | FICFPMLTLVGASKADNHDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDRHNSTTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQPN* |
| Ga0157285_100154962 | 3300012897 | Soil | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEAQWLRLPRSVEKERAPGGCPPGLFTQTPHQKSTQLN* |
| Ga0157299_100706371 | 3300012899 | Soil | QNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0157291_103975751 | 3300012902 | Soil | IAALPPIATPIGQNTALAWFSMLTLVSASKADNPDSFAVFDGEDCVGHIMRTHKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERAPGGIRPGLFTQTPHQKSTQLN* |
| Ga0157286_102137072 | 3300012908 | Soil | MLILVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDRHNSTTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLFTQTPHQKSTQLN* |
| Ga0157290_101285961 | 3300012909 | Soil | SMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0157301_100778681 | 3300012911 | Soil | LPCSGVATILAINSESGTRSLTRPMSPIGQNTALVCFSMLTLVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDNPSNTVDRGYAATREQAMADFEAQWLRLPRSVEKERAPGGIRPGLFTQTPHQKSTQLN* |
| Ga0157306_101276581 | 3300012912 | Soil | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLFGSFEKERASGAIHPRLFTQTPHKKLRS* |
| Ga0157310_103579581 | 3300012916 | Soil | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKS |
| Ga0164301_107381111 | 3300012960 | Soil | VCFSMLTLVSASKADNRDRLAVFDGADCVGHIMRTQKSPPGKPWFWTIFVSDRHNSTTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0164308_119906581 | 3300012985 | Soil | INSESGTRSLTRPMSPIGQNTALVCFSMLTLVSASKADNRDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0157371_109704081 | 3300013102 | Corn Rhizosphere | MLTLVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDGPSVTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLFTQTPHQKSTQLN* |
| Ga0173483_100087561 | 3300015077 | Soil | NTALAWFSMLTLVSASKADNPDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN* |
| Ga0132258_101452672 | 3300015371 | Arabidopsis Rhizosphere | MVYSQRVLTNHSASGWRGLSRITKWPEYRFNIFSMLTLVSASKADNSDSFAVFEGDDCVGHIMHTQKSPPGKPWFWTIFVGDTRISTVDRGYAATREQALADFEALWLGFFRSFEKQRASGTIRPRLFTQTPHQKSTLLN* |
| Ga0132258_101630676 | 3300015371 | Arabidopsis Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHVMRTQKSPPGKPWFWTIFVGGTRSVDRGYAATREQALADFDALWLGLLGSSEKERASGTIRPRLFTQTPHQKTTQLN* |
| Ga0132258_103302943 | 3300015371 | Arabidopsis Rhizosphere | MLTLVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDSPSNTVDRGYAATHEQAMADFEAQWLRLPRSVEKERASGTIRPRLFTQTPHQKSTQLN* |
| Ga0132258_123455022 | 3300015371 | Arabidopsis Rhizosphere | FSMLTLVSASKADNRDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN* |
| Ga0132256_1000868154 | 3300015372 | Arabidopsis Rhizosphere | MFGMLTLVSASTVDNRNSFAVFDGEDCVGHIMRTQKSPPGKRWFWTIFVSDSASNTLDRGYAATREQAMADFEAQWLRLPRSLEKERASGNIRPRLFTQTPHQKSTQLN* |
| Ga0132257_1000995652 | 3300015373 | Arabidopsis Rhizosphere | MASKCSDSTALECPVIDVLDVHRLRTCRPSRVTNWPEYPFSMFGMLTLVSASTVDNSNSFAVFDGEDCVGHLMRTQKSPPGKRWFWTIFVSDSRSNTLDRGYATTHEQAMADFEAQWLRLPRSLEKERASGNIRPRLFTQTPHQKSTQLN* |
| Ga0132257_1019877142 | 3300015373 | Arabidopsis Rhizosphere | HSASGWRGLSRITKWPEYRFNIFSMLTLVSASKADNSDSFAVFEGDDCVGHIMHTQKSPPGKPWFWTIFVGDTRISTVDRGYAATREQALADFEALWLGLFRSFEKQRASGTIRPRLFTQTPHQKSTLLN* |
| Ga0132255_1002124493 | 3300015374 | Arabidopsis Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQ* |
| Ga0132255_1012860931 | 3300015374 | Arabidopsis Rhizosphere | MFGMLTLVSASSVDNSNSFAVFDGEDCVGHLMHTQKSPPGKRWFWTIFVSDSASNTLDRGYAATHEQAMADFEAQWLRLPRSLEKERASGNIRPRLFTQTPHQKSTQLN* |
| Ga0173481_100219793 | 3300019356 | Soil | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN |
| Ga0247746_11553061 | 3300022886 | Soil | MLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN |
| Ga0247799_10615972 | 3300023072 | Soil | ALVCFSMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0247748_10633302 | 3300023168 | Soil | PPIATPIGQNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN |
| Ga0207647_102171011 | 3300025904 | Corn Rhizosphere | MLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIHPRLFTQTPHKKLRS |
| Ga0207645_105803181 | 3300025907 | Miscanthus Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIHPRLFTQTPHKKLRS |
| Ga0207660_101318633 | 3300025917 | Corn Rhizosphere | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIHPRLF |
| Ga0207657_107034853 | 3300025919 | Corn Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN |
| Ga0207681_110044351 | 3300025923 | Switchgrass Rhizosphere | CFSMLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0207701_101944582 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN |
| Ga0207670_100679502 | 3300025936 | Switchgrass Rhizosphere | DCRGWIALLRRGNDPGDQFRERHSLADQADVTNWPEYRFSMLSMLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN |
| Ga0207670_118328241 | 3300025936 | Switchgrass Rhizosphere | SKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0207708_103710732 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISVVDRGYAATREQALADFDSLWLGLFGSFEKERASGAIRPRLFTQTPHQKTTQLN |
| Ga0207592_1008921 | 3300026651 | Soil | IGQNTALAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN |
| Ga0207547_1065571 | 3300026807 | Soil | TLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN |
| Ga0207620_10031781 | 3300026873 | Soil | LAWFSMLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQPN |
| Ga0207564_1084541 | 3300027438 | Soil | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEAQWLRLPRSVEKERAPGGCPPGLFTQT |
| Ga0209995_10795331 | 3300027471 | Arabidopsis Thaliana Rhizosphere | QMLTLVSASKADNPDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERAPGTIRPRLFTQTPHQKSTQPN |
| Ga0210002_10595581 | 3300027617 | Arabidopsis Thaliana Rhizosphere | GEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGAIRPRLVTQTPHQKITQLN |
| Ga0209971_10459621 | 3300027682 | Arabidopsis Thaliana Rhizosphere | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERAPGTTRPRLFTQTPHQKSTQPN |
| Ga0209703_11810661 | 3300027723 | Freshwater Sediment | GQNTALACFSMLTLVSASKADNRDSLAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEALWLRLLRSPQTPHQKSTQPN |
| Ga0209811_102440771 | 3300027821 | Surface Soil | VFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0209974_100828472 | 3300027876 | Arabidopsis Thaliana Rhizosphere | MLTLVSASKADNPDSFAVFYGEDCVGHIMRTQKSPPGKPWFWTIFVSDKHSSIVDRGYAATHEQAMADFEALWLRLLRSLEKERTPGTIRPRLFTQTPHQKSTQLN |
| (restricted) Ga0255311_10052843 | 3300031150 | Sandy Soil | MLTLVSASKADNRDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDSPNNTVDRGYAATREQAMADFEAQWLRLPRSLEKERASGAIRPRLFMQTPHQKSTPRN |
| (restricted) Ga0255310_100368311 | 3300031197 | Sandy Soil | MFALGQERTFNVTNWPESALALFAMLTLVSASKADNRDSFAVFDGEDCVGHIMRTQKSPPGKPWFWTIFVSDSPGITVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLFTQTPHQKSTQLN |
| (restricted) Ga0255312_10292182 | 3300031248 | Sandy Soil | MLTLVSASKADNSDSLAVFDGEDCVGHIMCTHKSPPGKPWFWTIFVSDSPNNTVDRGYAATREQAMADFEAQWLRLLRALEKERAPGKVRPRLFTQTPHQ |
| Ga0310813_100936002 | 3300031716 | Soil | MLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKLRS |
| Ga0310901_100011031 | 3300031940 | Soil | ILAINSESGTRSLTRPMSPIGQNTALVCFSMLTLVSASKADNRDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0310897_100031647 | 3300032003 | Soil | DSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0310906_113178621 | 3300032013 | Soil | RWKARIPARSNQALEKKIGRRELRTAVRVTKWPEYRFSMLSMLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN |
| Ga0310890_110850801 | 3300032075 | Soil | NQALEKKIGRRELRTAVRVTKWPEYRFSMLSMLTLVSASKADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN |
| Ga0310810_100356312 | 3300033412 | Soil | MLSMLTLVSASNADNPDSFAVFDGDDCVGHIMRTQKSPPGKPWFWTIFVGDTHISAVDRGYAATREQALADFDALWLGLLGSFEKERASGAIRPRLFTQTPHQKTTQLN |
| Ga0373948_0022037_744_1064 | 3300034817 | Rhizosphere Soil | MLTLVSASKADNRDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0373950_0038276_355_675 | 3300034818 | Rhizosphere Soil | MLTLVSASKADNCDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
| Ga0373958_0054419_1_390 | 3300034819 | Rhizosphere Soil | SGTRSLTRPMSPIGQNTALVCFSMLTLVSASKADNRDSLAVFDGEDCVGHIMRTPKSPPGKPWFWTIFVSDRHSSTVDRGYAATREQAMADFEAQWLRLPRSVEKERASGTIRPRLVTQTPHQKSTQLN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |