NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103401

Metagenome / Metatranscriptome Family F103401

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103401
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 40 residues
Representative Sequence LKDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY
Number of Associated Samples 28
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.01 %
% of genes from short scaffolds (< 2000 bps) 91.09 %
Associated GOLD sequencing projects 28
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.020 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine
(79.208 % of family members)
Environment Ontology (ENVO) Unclassified
(98.020 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(99.010 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 47.76%    β-sheet: 0.00%    Coil/Unstructured: 52.24%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00574CLP_protease 85.15
PF01938TRAM 6.93
PF11264ThylakoidFormat 0.99
PF09493DUF2389 0.99
PF01177Asp_Glu_race 0.99
PF13638PIN_4 0.99
PF02769AIRS_C 0.99
PF05656DUF805 0.99
PF02601Exonuc_VII_L 0.99
PF00999Na_H_Exchanger 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 170.30
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 170.30
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 85.15
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.99
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.99
COG1570Exonuclease VII, large subunitReplication, recombination and repair [L] 0.99
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.99
COG3152Uncharacterized membrane protein YhaH, DUF805 familyFunction unknown [S] 0.99
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.99
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.02 %
UnclassifiedrootN/A1.98 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001830|ACM40_1015370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus1528Open in IMG/M
3300001945|GOS2241_1025673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus1373Open in IMG/M
3300001951|GOS2249_1042612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus879Open in IMG/M
3300001961|GOS2240_1025720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus1670Open in IMG/M
3300001964|GOS2234_1016522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus1258Open in IMG/M
3300005593|Ga0066837_10277436All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300006329|Ga0068486_1206929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus2248Open in IMG/M
3300006334|Ga0099675_1248437All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300006334|Ga0099675_1273392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus959Open in IMG/M
3300006334|Ga0099675_1304784All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300006334|Ga0099675_1420332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus526Open in IMG/M
3300006337|Ga0068495_1149459All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300006337|Ga0068495_1239589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1060Open in IMG/M
3300006337|Ga0068495_1243612All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300006337|Ga0068495_1306502All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300006337|Ga0068495_1367488Not Available958Open in IMG/M
3300006337|Ga0068495_1383314All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300006337|Ga0068495_1394912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1013Open in IMG/M
3300006337|Ga0068495_1412237All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300006337|Ga0068495_1454736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1456Open in IMG/M
3300006337|Ga0068495_1477546All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300006337|Ga0068495_1783552All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300006345|Ga0099693_1127839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1368Open in IMG/M
3300006345|Ga0099693_1131138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus900Open in IMG/M
3300006345|Ga0099693_1141711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus3439Open in IMG/M
3300006345|Ga0099693_1161795All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300006345|Ga0099693_1167020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.896Open in IMG/M
3300006345|Ga0099693_1240097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1351Open in IMG/M
3300006345|Ga0099693_1349083All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300006350|Ga0099954_1110954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus3007Open in IMG/M
3300006350|Ga0099954_1110978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1378Open in IMG/M
3300006350|Ga0099954_1159826All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300006350|Ga0099954_1186764All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300006350|Ga0099954_1195683All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006350|Ga0099954_1220295All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300006350|Ga0099954_1232844All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300006350|Ga0099954_1238126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1766Open in IMG/M
3300006350|Ga0099954_1259553All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300006351|Ga0099953_1118264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1503Open in IMG/M
3300006351|Ga0099953_1129600All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300006351|Ga0099953_1160139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1326Open in IMG/M
3300006351|Ga0099953_1200117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus994Open in IMG/M
3300006351|Ga0099953_1309488All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300006351|Ga0099953_1339790All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300006351|Ga0099953_1346180All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300006351|Ga0099953_1430789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1101Open in IMG/M
3300006351|Ga0099953_1517971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus920Open in IMG/M
3300006413|Ga0099963_1100443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus2421Open in IMG/M
3300006413|Ga0099963_1139359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1390Open in IMG/M
3300006413|Ga0099963_1143575All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300006413|Ga0099963_1150319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus2932Open in IMG/M
3300006413|Ga0099963_1165541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1384Open in IMG/M
3300006413|Ga0099963_1173255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1812Open in IMG/M
3300006413|Ga0099963_1183149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1912Open in IMG/M
3300006413|Ga0099963_1223451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1399Open in IMG/M
3300006413|Ga0099963_1231837All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300006413|Ga0099963_1234461All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300006413|Ga0099963_1261660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus945Open in IMG/M
3300006413|Ga0099963_1325943All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300006413|Ga0099963_1330443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus977Open in IMG/M
3300006413|Ga0099963_1380247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus986Open in IMG/M
3300006413|Ga0099963_1398964All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300006480|Ga0100226_1193493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus980Open in IMG/M
3300006480|Ga0100226_1197955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus2495Open in IMG/M
3300006480|Ga0100226_1275276All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300006480|Ga0100226_1282541All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300006480|Ga0100226_1290895All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300006480|Ga0100226_1303242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1423Open in IMG/M
3300006480|Ga0100226_1331395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1366Open in IMG/M
3300006480|Ga0100226_1393799All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300006480|Ga0100226_1413207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus880Open in IMG/M
3300006480|Ga0100226_1442873All Organisms → cellular organisms → Bacteria → Terrabacteria group739Open in IMG/M
3300006480|Ga0100226_1449976All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300006481|Ga0100229_1176759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1007Open in IMG/M
3300006481|Ga0100229_1179124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus2041Open in IMG/M
3300006481|Ga0100229_1190771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus3602Open in IMG/M
3300006481|Ga0100229_1194947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1094Open in IMG/M
3300006481|Ga0100229_1210085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1219Open in IMG/M
3300006481|Ga0100229_1228596All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300006481|Ga0100229_1237573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1057Open in IMG/M
3300006481|Ga0100229_1251234All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300006481|Ga0100229_1369929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.1433Open in IMG/M
3300006481|Ga0100229_1372059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus940Open in IMG/M
3300006481|Ga0100229_1396225All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300006481|Ga0100229_1460864Not Available584Open in IMG/M
3300006481|Ga0100229_1552649All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300006565|Ga0100228_1473708All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300007591|Ga0102781_1173083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1464Open in IMG/M
3300009677|Ga0115104_10739773All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300011324|Ga0138385_1249536All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300012936|Ga0163109_10170400All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300012936|Ga0163109_11202907All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300012936|Ga0163109_11413563All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300018671|Ga0193571_1018784All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300020404|Ga0211659_10295002All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300020406|Ga0211668_10245181All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300020429|Ga0211581_10262533All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300026077|Ga0208749_1060540All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300027774|Ga0209433_10007962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus3345Open in IMG/M
3300027830|Ga0209359_10094963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus1246Open in IMG/M
3300031785|Ga0310343_11217006All Organisms → cellular organisms → Bacteria569Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine79.21%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine7.92%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.95%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater2.97%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.98%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.99%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.99%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001830Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM40, ROCA_DNA028_0.2um_3lEnvironmentalOpen in IMG/M
3300001945Marine microbial communities from Galapagos, Equador - GS026EnvironmentalOpen in IMG/M
3300001951Marine microbial communities from North Seamore Island, Equador - GS034EnvironmentalOpen in IMG/M
3300001961Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025EnvironmentalOpen in IMG/M
3300001964Marine microbial communities from Rosario Bank, Honduras - GS018EnvironmentalOpen in IMG/M
3300005593Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86EnvironmentalOpen in IMG/M
3300006329Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500mEnvironmentalOpen in IMG/M
3300006334Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025mEnvironmentalOpen in IMG/M
3300006337Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025mEnvironmentalOpen in IMG/M
3300006345Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075mEnvironmentalOpen in IMG/M
3300006350Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075mEnvironmentalOpen in IMG/M
3300006351Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045mEnvironmentalOpen in IMG/M
3300006413Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0025mEnvironmentalOpen in IMG/M
3300006480Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0075mEnvironmentalOpen in IMG/M
3300006481Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0025mEnvironmentalOpen in IMG/M
3300006565Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125mEnvironmentalOpen in IMG/M
3300007591Marine microbial communities from the Southern Atlantic ocean - KN S15 DCM_B metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009677Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011324Marine microbial communities from the Southern Atlantic ocean - KN S17 DCM_A metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300018671Metatranscriptome of marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020406Marine microbial communities from Tara Oceans - TARA_B100000886 (ERX555926-ERR599024)EnvironmentalOpen in IMG/M
3300020429Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)EnvironmentalOpen in IMG/M
3300026077Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B (SPAdes)EnvironmentalOpen in IMG/M
3300027774Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m (SPAdes)EnvironmentalOpen in IMG/M
3300027830Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ACM40_101537023300001830Marine PlanktonFYYLKDLDQHLCRKRVGSLVVASLLLIINILDIKGVNKTKNY*
GOS2241_102567313300001945MarineLFYYLKDLDLHLCRKRVGSLVLASLLLVIYILDIKRVNKPIIY*
GOS2249_104261233300001951MarineLKDLDRHLCRKRVGSLVVASLHLIINILDIKVTINQKNY*
GOS2240_102572033300001961MarineSQLFYYLKDLDLHLCRKRVGSLVVASLQLIINILDIKGVNKPKNY*
GOS2234_101652233300001964MarineLDLHLCRKRVGSLVVASLHLILNILDIKGVNKLQNY*
Ga0066837_1027743613300005593MarineKDLDLHLCRKRVGSLVVASLLLIVIILDIKVAINQKNY*
Ga0068486_120692913300006329MarineLHLCRKRVGSLVQASLHLIINILDIKRVNKPIIYQFKNEN*
Ga0099675_124843713300006334MarineYLKDLDLHLCRKRVGSLVVASLHLIINILDIKVTINQKNY*
Ga0099675_127339233300006334MarineLRDLDLHLCRKRVGSLVVASLRLIVIILDIKVAINQKNY*
Ga0099675_130478413300006334MarineYLRDLDLHLCRKRVGSLVVASLRLIVIILDIKVAINQKNY*
Ga0099675_142033213300006334MarineYLKDLDLHLCRKRVGSLVVASLHLIINILDIKVAIKQKN*
Ga0068495_114945923300006337MarineLHLSRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0068495_123958913300006337MarineGLDLHLCRKRVGSLVVASLHLLINILDIKGVNKPKNY*
Ga0068495_124361213300006337MarineIEFILFYYLKDLDLHLCRKRVGSLVVASLHLIINILDIKVAINQKNY*
Ga0068495_130650223300006337MarineTIIVLLFYYLKDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0068495_136748813300006337MarineNNLKDLDLHLCRKRVGSLVVASLHKIINILDIKGVNNPKNY*
Ga0068495_138331423300006337MarineKGLDLHLCRKRVVSLVVTSLHFIINILDIKGVNKLKNY*
Ga0068495_139491233300006337MarineIYEKILFYYLKDLDLHLCRKRVGSLVVASLHMIINILDIKVAINQKNY*
Ga0068495_141223723300006337MarineFCYLKGLDLHLCRKRVVSLVVTSLHLIIIILDIKGVNKSKNYKFKN*
Ga0068495_145473613300006337MarineGLDLHLCRKRAGSLVVASWHLIINILDIKGVNKPINY*
Ga0068495_147754623300006337MarineLKDLDLHLCRKRVGSLVVASLRLIVIILDIKVAINQKNY*
Ga0068495_178355223300006337MarineLDLHLCRKRVGSLVVASLHLLINIIDIKGVNKPKNY*
Ga0099693_112783913300006345MarineEDLNLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0099693_113113813300006345MarineDLDLHLCRRRVGSLVVASLQLIINILDIKEAINQKNY*
Ga0099693_114171153300006345MarineYYLKDLDLHLCRKRVGSLVVASLHLIINILDIKVEINQKNY*
Ga0099693_116179513300006345MarineSLLFYYLKDLDLHLCRKRVGSLVVASLHLIVIILDIKVAINQKNY*
Ga0099693_116702033300006345MarineYLKDLDLHLCRKRVESLVLASLLLIINILDIKRVNKPILY*
Ga0099693_124009733300006345MarineKDLDLHLCRKRVGSLVVASLHLIINILDIKVAINQKNY*
Ga0099693_134908313300006345MarineLKDLDLHLCRKRVGSLVVASLRLIVIILDIKVTINQKNY*
Ga0099954_111095413300006350MarineYLKELDLHLCRKRVGSLVVASLRLIVIILDIKVVINQKNY*
Ga0099954_111097813300006350MarineLHLCRKRVGSLVVASVRLIINILDIKGVNKPKNY*
Ga0099954_115982623300006350MarineLHLCRKRVGSLVVASLRLIINILDIKGVNKPKNY*
Ga0099954_118676413300006350MarineLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0099954_119568313300006350MarineLKDLDLHLRRKRVESLVVASLHLIINILDIKGVNKPKNY*
Ga0099954_122029523300006350MarineYYLKYLDLHLCRKRVGSLVVASLRLIVIILDIKVVINHKNY*
Ga0099954_123284423300006350MarineLHLCRKRVVSLVVASLHLIINILDIKGVNKPINY*
Ga0099954_123812643300006350MarineDQHLCRKRVGSLVVASLHFIVIILDIKVTINQKNY*
Ga0099954_125955323300006350MarineQHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0099953_111826433300006351MarineHIQLSQLFYYSRDLDLHLCRKRVESLVVASFHLIINILDIKGVNKPKNY*
Ga0099953_112960013300006351MarineIQLSQSFYYLKGLDLHLCRKRVGSLVVASWHLIINILDIKRVNKPINY*
Ga0099953_116013913300006351MarineSLLFYYLKDLDLHLCRKRVGSLVVASLHLIIIILDIKV*
Ga0099953_120011713300006351MarineLDLHLCRKRVGSLVVASLQLIINILDIKVVINQKNY*
Ga0099953_130948823300006351MarineYLKDLDLHLCRKRVGSLVLASLHLIINILDIKVAINQKNY*
Ga0099953_133979013300006351MarineLKDLDLHLCRKRVGSLVVASLHLIIIILDIKVAINQKNY*
Ga0099953_134618013300006351MarineDLRLCRKRVGSLVVASLHFIVIILDIKVTINQKNY*
Ga0099953_143078933300006351MarineKDLDLHLCRKRVGSLVLASLLLIINILDIKRVNKPIIYLFKNEN*
Ga0099953_151797133300006351MarineSLLFYYLKDLDLHLCRKRVGSLVVASLHLINNILDIKGVNKPKNY*
Ga0099963_110044313300006413MarineDLHLCRKRVGSLVGTSLHWIINILDIKGVNKPKNY*
Ga0099963_113935933300006413MarineKGLDLHQCRKRVGSLVVASLQLIINILDIKSVNKPNNY*
Ga0099963_114357523300006413MarineYLKDLDLHLCRKRVGSLVVASLHKIINILDIKGVNKPKNN*
Ga0099963_115031913300006413MarineKDLDLHLCRRRVGSLVVVTLHLIINILGIKGVNKPKNY*
Ga0099963_116554143300006413MarineDLHLCRKRVGSLVVASLHLIIIILDIKGVNKSKNY*
Ga0099963_117325513300006413MarineSLLFYFLKDLDLHQCRRRVGSLVVASLHFIINILDIKGVNKPKNY*
Ga0099963_118314913300006413MarineYLRDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPRCY*
Ga0099963_122345143300006413MarineLKGLGLHLCRKRVGSLVVASLHLIINILGIKGVNKPKNY*
Ga0099963_123183713300006413MarineLKDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0099963_123446123300006413MarineDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0099963_126166033300006413MarineLKGLDLHLCRKRVGSLVVASLHLIINILDIKCVNKPINY*
Ga0099963_132594323300006413MarineLHQCRKRVESLVVASLHLIINNIDIKGVNKPINY*
Ga0099963_133044313300006413MarineFYYLKDLDLHLCRKRVGSLVVASLHFIVIILDIKVAINQKNC*
Ga0099963_138024713300006413MarineKDLDLHLCRKRVGSLVVASLRLIVIILDIKVVINQKNY*
Ga0099963_139896423300006413MarineYLKDLDLHLCRKRVGSLVVASLRLIINILDIKGVNKPKNY*
Ga0100226_119349313300006480MarineDLHLCRKRVGSLVVASLHLIINILDFKGVNKPKNYKFKN*
Ga0100226_119795563300006480MarineDLDLHLCRKRVGSLVVASLHLIINIFDIKGVNKPKNY*
Ga0100226_127527613300006480MarineLDLHLCRKRVGSLVVASLRLIVIILDIKVVINQKNY*
Ga0100226_128254113300006480MarineDLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY*
Ga0100226_129089523300006480MarineDLDLHLCRKRVGALVVFALHLIINILDFKGVNNPRNY*
Ga0100226_130324213300006480MarineLFYYLKDLDLHLCRKRVGSLVLTSLLLIINILDIKRVNKPNNY*
Ga0100226_133139513300006480MarineLDLHLCRKRVGSLVVASLHLIINILDIKEAINQKNY*
Ga0100226_139379913300006480MarineFYYLKDLDLHLCRKRVGSLVVASLHLIINILDIKVTINQKNY*
Ga0100226_141320713300006480MarineHLYRKRVGSLVVASLHLIIIILDNKGVNKPKNCKFKN*
Ga0100226_144287313300006480MarineYLKDLDLHLCLKRVWSLVVASLHLIVNILDNKGVNKPKN*
Ga0100226_144997623300006480MarineLKGLDLHLCRKRVVSLVVASLHLIINILDIKGVNKPINYYFKN*
Ga0100229_117675913300006481MarineYLKDLDLHLCRKRVGALVVASLRLIVIILDIKVAINQTNY*
Ga0100229_117912413300006481MarineLHLCRKRVGSLVVATLHLIINILDIKEAINQKNY*
Ga0100229_119077113300006481MarineIHIQLSLLFYFFKDLDLHLCRKRVGSLVVASLQLIIIILDIKV*
Ga0100229_119494713300006481MarineLHLCRKRVVSLDVASLHLIINILDIKGVNKPINY*
Ga0100229_121008533300006481MarineWLLFYYLKDLDLHLCHKRVGSLVVASLHLIIDILDIKGVNILKNY*
Ga0100229_122859623300006481MarineFYYLKDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPINY*
Ga0100229_123757333300006481MarineYLKDLDLHLCRKRVGSLVVATLHLIINILDIKGVN*
Ga0100229_125123423300006481MarineDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKSKNY*
Ga0100229_136992933300006481MarineLQLFYYLRDLDLHLCRKRVESLVVASLHLIINILDIKGINKPKNY*
Ga0100229_137205913300006481MarineLDLHLCRKRVGSLEVASLHLIINILDIKGVNKPKNY*
Ga0100229_139622523300006481MarineYLKDLDLHLCRKRVGSLVVASLRLIVIILDIKVSINQKNY*
Ga0100229_146086423300006481MarineFYYLKDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPINYKFKN*
Ga0100229_155264913300006481MarineDLDLHLCRKRVWALVVASLRLIINILDIKGVNTPKNY*
Ga0100228_147370813300006565MarineGKGTFYFLRDLDQHLCHKRVLSLVVVSILLIIHILDIKSVNKTINTLFKI*
Ga0102781_117308313300007591MarineLRDLDQHLCHKRVVSLVVVSILLITHILDIKSVNKTINTLFKN*
Ga0115104_1073977313300009677MarineLCHKRVVSLVVTSKLLIVNILDIKGVNKPYNCSFKN*
Ga0138385_124953623300011324MarineYYLRDLDQHLCHKRVLSLVVVSKLLIIHILDIKRVNKTKNTFFKN*
Ga0163109_1017040043300012936Surface SeawaterLFYCLKDLDLHLCRNRVGSLVVASLRLIINILDIKGVNKTKNY*
Ga0163109_1120290723300012936Surface SeawaterYYLKDLDLHLCRKRVGSLVVASLHLIINILDIKGVHKTKNY*
Ga0163109_1141356323300012936Surface SeawaterLKDLDLHLCRKRVGSLVVASLHLIINILDIKGVNKTKNY*
Ga0193571_101878413300018671MarineLDLHLCRKRVGSLVVASLHLIINILDIKGVNKPKNY
Ga0211659_1029500213300020404MarineLLLSFFYLKDLGQHPCHKRVESLVVVSKLLIVNILDIKCVNKPINYLFKN
Ga0211668_1024518113300020406MarineLFYYLKGLDLHLSRKRVGSLVVTTLQLIISILDVKRVNKPIN
Ga0211581_1026253323300020429MarineDLHLCRNRVGSLVVASLRLIINILDIKGVNKTKNY
Ga0208749_106054023300026077MarineLKDLDLHLCRKRVGSLVVTSLHLIINILDIKRVNKPINY
Ga0209433_1000796253300027774MarineFYCLKDLDLHLCRNRVGSLVVASLRLIINILDIKGVNKTKNY
Ga0209359_1009496333300027830MarineGLDLHLCRKRVVSLVVASLHLIINILDIKGVNKPINY
Ga0310343_1121700613300031785SeawaterLGLHLRRKRVGSLVVASLHLIINILDNKGLNKPKNY

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.