Metagenome / Metatranscriptome Family F103355

Basic Information
Family ID	F103355
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	48 residues
Representative Sequence	MLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Number of Associated Samples	96
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	46.53 %
% of genes from short scaffolds (< 2000 bps)	82.18 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (63.366 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater (25.743 % of family members)
Environment Ontology (ENVO)	Unclassified (53.465 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.079 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 91.67% β-sheet: 0.00% Coil/Unstructured: 8.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09084	NMT1	44.55
PF00202	Aminotran_3	11.88
PF00005	ABC_tran	8.91
PF00392	GntR	4.95

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	44.55
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	44.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.37 %
Unclassified	root	N/A	33.66 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.38 %
Unclassified	root	N/A	33.66 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.55 %
Unclassified	root	N/A	33.66 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2.97 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	44.55 %
Unclassified	root	N/A	33.66 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	2.97 %

Name	Rank	Taxonomy	Distribution
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	36.63 %
Unclassified	root	N/A	33.66 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	5.94 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2.97 %

Name	Rank	Taxonomy	Distribution
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	35.64 %
Unclassified	root	N/A	33.66 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	4.95 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.97 %
Sulfitobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Roseobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter	35.64 %
Unclassified	root	N/A	33.66 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.97 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %
unclassified Sulfitobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	21.78 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	13.86 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.96 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	2.97 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.99 %
Rhodobacteraceae bacterium HTCC2083	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	0.99 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000418\|P_2C_Liq_1_UnCtyDRAFT_1009713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2083	2444	Open in IMG/M
3300001349\|JGI20160J14292_10175622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	643	Open in IMG/M
3300002754\|JGI24928J39210_1015246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	561	Open in IMG/M
3300003345\|JGI26080J50196_1016195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1995	Open in IMG/M
3300003346\|JGI26081J50195_1087680	Not Available	592	Open in IMG/M
3300003409\|JGI26088J50261_1006107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	4992	Open in IMG/M
3300003580\|JGI26260J51721_1007048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	3349	Open in IMG/M
3300003583\|JGI26253J51717_1005446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	4153	Open in IMG/M
3300005837\|Ga0078893_11882123	Not Available	958	Open in IMG/M
3300006027\|Ga0075462_10029752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1758	Open in IMG/M
3300006029\|Ga0075466_1019131	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300006357\|Ga0075502_1099426	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300006384\|Ga0075516_1240863	Not Available	1217	Open in IMG/M
3300006397\|Ga0075488_1591281	Not Available	1006	Open in IMG/M
3300006803\|Ga0075467_10023079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	3993	Open in IMG/M
3300007725\|Ga0102951_1219078	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300008012\|Ga0075480_10064560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2112	Open in IMG/M
3300008956\|Ga0104261_1039818	Not Available	576	Open in IMG/M
3300009071\|Ga0115566_10765512	Not Available	532	Open in IMG/M
3300009074\|Ga0115549_1043248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1638	Open in IMG/M
3300009079\|Ga0102814_10277608	Not Available	912	Open in IMG/M
3300009080\|Ga0102815_10678619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	582	Open in IMG/M
3300009124\|Ga0118687_10011960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2853	Open in IMG/M
3300009193\|Ga0115551_1091580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1433	Open in IMG/M
3300009193\|Ga0115551_1470291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	537	Open in IMG/M
3300009472\|Ga0115554_1076361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1458	Open in IMG/M
3300009505\|Ga0115564_10208749	Not Available	1013	Open in IMG/M
3300009606\|Ga0115102_10948517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1474	Open in IMG/M
3300010368\|Ga0129324_10215456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	775	Open in IMG/M
3300012470\|Ga0129329_1017024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1325	Open in IMG/M
3300012472\|Ga0129328_1006667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1671	Open in IMG/M
3300016726\|Ga0182045_1359524	Not Available	1206	Open in IMG/M
3300016766\|Ga0182091_1146299	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300016776\|Ga0182046_1184841	Not Available	525	Open in IMG/M
3300016791\|Ga0182095_1555931	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300017950\|Ga0181607_10653799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	549	Open in IMG/M
3300018410\|Ga0181561_10124000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1366	Open in IMG/M
3300018413\|Ga0181560_10130450	Not Available	1294	Open in IMG/M
3300018416\|Ga0181553_10537244	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300019214\|Ga0180037_1010379	Not Available	541	Open in IMG/M
3300019459\|Ga0181562_10187413	Not Available	1095	Open in IMG/M
3300020165\|Ga0206125_10079556	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1450	Open in IMG/M
3300020165\|Ga0206125_10161953	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300020165\|Ga0206125_10341136	Not Available	553	Open in IMG/M
3300020169\|Ga0206127_1153182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	888	Open in IMG/M
3300020187\|Ga0206130_10281265	Not Available	731	Open in IMG/M
3300020187\|Ga0206130_10417429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	532	Open in IMG/M
3300020347\|Ga0211504_1027716	Not Available	1457	Open in IMG/M
3300020352\|Ga0211505_1011175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2408	Open in IMG/M
3300021084\|Ga0206678_10434959	Not Available	613	Open in IMG/M
3300021185\|Ga0206682_10320110	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300021365\|Ga0206123_10287342	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300021957\|Ga0222717_10436042	Not Available	717	Open in IMG/M
3300021960\|Ga0222715_10162358	Not Available	1373	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10061608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1753	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10119919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1438	Open in IMG/M
3300023565\|Ga0228688_103589	Not Available	1130	Open in IMG/M
3300023566\|Ga0228679_1012496	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300023674\|Ga0228697_121506	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300023701\|Ga0228685_1021646	Not Available	936	Open in IMG/M
3300024231\|Ga0233399_1019445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	2088	Open in IMG/M
3300024237\|Ga0228653_1041138	Not Available	1062	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10193136	Not Available	946	Open in IMG/M
3300024266\|Ga0228661_1035163	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	915	Open in IMG/M
3300024291\|Ga0228660_1038487	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	909	Open in IMG/M
3300024346\|Ga0244775_10593917	Not Available	899	Open in IMG/M
3300024346\|Ga0244775_11255007	Not Available	575	Open in IMG/M
3300024413\|Ga0233393_1013984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	2142	Open in IMG/M
3300025508\|Ga0208148_1127865	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300025620\|Ga0209405_1023477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2524	Open in IMG/M
3300025626\|Ga0209716_1030617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1996	Open in IMG/M
3300025636\|Ga0209136_1018103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2884	Open in IMG/M
3300025668\|Ga0209251_1024511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2516	Open in IMG/M
3300025680\|Ga0209306_1030693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1830	Open in IMG/M
3300025704\|Ga0209602_1018113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	3674	Open in IMG/M
3300025751\|Ga0208150_1035060	Not Available	1744	Open in IMG/M
3300025767\|Ga0209137_1029741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2938	Open in IMG/M
3300025832\|Ga0209307_1063847	Not Available	1271	Open in IMG/M
3300026406\|Ga0247565_1004893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1524	Open in IMG/M
3300026407\|Ga0247589_1010219	Not Available	1331	Open in IMG/M
3300026423\|Ga0247580_1093458	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300026427\|Ga0247556_1113082	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300026434\|Ga0247591_1036916	Not Available	934	Open in IMG/M
3300026437\|Ga0247577_1027390	Not Available	1267	Open in IMG/M
3300026461\|Ga0247600_1015165	Not Available	1412	Open in IMG/M
3300026468\|Ga0247603_1016582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1332	Open in IMG/M
3300026491\|Ga0228641_1067982	Not Available	825	Open in IMG/M
3300026506\|Ga0228604_1075982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	567	Open in IMG/M
3300027081\|Ga0208954_1048792	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300027413\|Ga0208950_1002418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	7740	Open in IMG/M
3300027501\|Ga0208948_1073033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	679	Open in IMG/M
3300028095\|Ga0247563_1024349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1256	Open in IMG/M
3300028102\|Ga0247586_1115929	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300028111\|Ga0233397_1049370	Not Available	1215	Open in IMG/M
3300028233\|Ga0256417_1054425	Not Available	1084	Open in IMG/M
3300028334\|Ga0247597_1041031	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300028391\|Ga0233394_1066036	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300028414\|Ga0228627_1071752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	866	Open in IMG/M
3300031851\|Ga0315320_10056895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	3039	Open in IMG/M
3300032073\|Ga0315315_10197974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1876	Open in IMG/M
3300032754\|Ga0314692_10315090	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.02%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.99%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	38.61%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.72%
Pelagic	Environmental → Aquatic → Marine → Pelagic	17.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.92%
Inlet	Environmental → Aquatic → Marine → Inlet	2.97%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.98%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.99%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	38.61%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	17.82%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	15.84%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	8.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.97%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.97%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	25.74%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	11.88%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.89%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	10.89%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	8.91%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	6.93%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.96%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.97%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.97%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.97%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.98%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.98%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.99%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.99%
Enviromental	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental	0.99%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.99%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.99%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.99%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000418	Marine microbial community from Union City, CA, USA - Pond 2C Liquid 1	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300002754	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_35	Environmental	Open in IMG/M
3300003345	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300003409	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA	Environmental	Open in IMG/M
3300003580	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA	Environmental	Open in IMG/M
3300003583	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006357	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006384	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006397	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300008956	Marine microbial communities from eastern North Pacific Ocean - P8 free-living McLane	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300012470	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012472	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016726	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016766	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016776	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019214	Estuarine microbial communities from the Columbia River estuary - R.1189 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023565	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 58R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023566	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 18R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023674	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 90R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023701	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 47R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024231	Seawater microbial communities from Monterey Bay, California, United States - 43D	Environmental	Open in IMG/M
3300024237	Seawater microbial communities from Monterey Bay, California, United States - 65D	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024266	Seawater microbial communities from Monterey Bay, California, United States - 75D	Environmental	Open in IMG/M
3300024291	Seawater microbial communities from Monterey Bay, California, United States - 74D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024413	Seawater microbial communities from Monterey Bay, California, United States - 21D	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025636	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025668	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025832	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)	Environmental	Open in IMG/M
3300026406	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 13R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026407	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 49R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026423	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 39R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026427	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 1R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026434	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 53R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026437	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 34R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026461	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 75R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026468	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 79R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026491	Seawater microbial communities from Monterey Bay, California, United States - 52D	Environmental	Open in IMG/M
3300026506	Seawater microbial communities from Monterey Bay, California, United States - 4D	Environmental	Open in IMG/M
3300027081	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C33A6_35 (SPAdes)	Environmental	Open in IMG/M
3300027413	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027501	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_17_M020 (SPAdes)	Environmental	Open in IMG/M
3300028095	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 11R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028102	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 45R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028111	Seawater microbial communities from Monterey Bay, California, United States - 35D	Environmental	Open in IMG/M
3300028233	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - MB_1026D (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028334	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 68R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028391	Seawater microbial communities from Monterey Bay, California, United States - 24D	Environmental	Open in IMG/M
3300028414	Seawater microbial communities from Monterey Bay, California, United States - 33D	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032754	Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim5_28May_surf (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103355

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P_2C_Liq_1_UnCtyDRAFT_10097131	3300000418	Enviromental	KKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
JGI20160J14292_101756221	3300001349	Pelagic Marine	MLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI*
JGI24928J39210_10152462	3300002754	Marine	MLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII*
JGI26080J50196_10161953	3300003345	Marine	RYHSKKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
JGI26081J50195_10876803	3300003346	Marine	MLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQ
JGI26088J50261_10061073	3300003409	Marine	MLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
JGI26260J51721_10070481	3300003580	Marine	MLCAACILWFGILLNFAILTMQAGLILARLNEENKLAIKRQRNWEKTI*
JGI26253J51717_10054463	3300003583	Marine	MLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKVI*
Ga0078893_118821232	3300005837	Marine Surface Water	KNMLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI*
Ga0075462_100297522	3300006027	Aqueous	MLCAACILWFGTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0075466_10191312	3300006029	Aqueous	MLCAACILWFGILLNFAILTMQAGLILARLNEENKLAIKRQRNWEKVI*
Ga0075502_10994262	3300006357	Aqueous	MLCAACILWFCTLLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0075516_12408631	3300006384	Aqueous	MLCAACILWFGTLLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0075488_15912812	3300006397	Aqueous	MLCAACILWFGVLLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0075467_100230792	3300006803	Aqueous	MLCAACILWFATLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0102951_12190781	3300007725	Water	ILWFGILLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0075480_100645604	3300008012	Aqueous	NFAILTMQAGLILARLNEENKLAIKRQRNWEKVI*
Ga0104261_10398182	3300008956	Ocean Water	QNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII*
Ga0115566_107655122	3300009071	Pelagic Marine	VVSQYHIKKIKIKNMLCAACILWFGILLNFAILTAQAGLILARLNEGNKLAIKRQRNWEKTI*
Ga0115549_10432482	3300009074	Pelagic Marine	MLCAACILWFCTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0102814_102776081	3300009079	Estuarine	MLCVAYILWFGTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKVI*
Ga0102815_106786192	3300009080	Estuarine	MLCAACILWFGILLNFAILTVQAGLILARLNEGNMLAIKRQRNWEKTI*
Ga0118687_100119604	3300009124	Sediment	MLCAACILWFGTLLNFAILTQQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0115551_10915803	3300009193	Pelagic Marine	ILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0115551_14702912	3300009193	Pelagic Marine	MLCAACILWFGTLLNFAILTVQAGLILARLNEENKLAIKRQRNWEK
Ga0115554_10763612	3300009472	Pelagic Marine	MLCAACILWFGTLLNFAILTVQVGLILARLNEENKLAIKRQRNWEKTI*
Ga0115564_102087493	3300009505	Pelagic Marine	MLCAACILWFGILLNFAISTVQAGLILARLNEGNMLAIKRQRNWEKTI*
Ga0115102_109485171	3300009606	Marine	LSDVEILLKKKFKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII*
Ga0129324_102154562	3300010368	Freshwater To Marine Saline Gradient	MLCAACILWYGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0129329_10170243	3300012470	Aqueous	MLCAACILWSGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0129328_10066673	3300012472	Aqueous	MLRYHSKKIKNMLCAACILWFGTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI*
Ga0182045_13595243	3300016726	Salt Marsh	FGILLNFAILTEQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0182091_11462991	3300016766	Salt Marsh	KKIKNMLCAACILWFGTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI
Ga0182046_11848411	3300016776	Salt Marsh	MLCAACILWFGTLLNFAILTMQAGLILARLNEENKLAIKRQRNWEKVI
Ga0182095_15559311	3300016791	Salt Marsh	LLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0181607_106537992	3300017950	Salt Marsh	MLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEK
Ga0181561_101240002	3300018410	Salt Marsh	MLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0181560_101304502	3300018413	Salt Marsh	FGTLLNFAILTVQAGLILARLNEENKLAIKRQRNWEKVI
Ga0181553_105372442	3300018416	Salt Marsh	CILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0180037_10103791	3300019214	Estuarine	MLKYYSKKFKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0181562_101874131	3300019459	Salt Marsh	MLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKVI
Ga0206125_100795563	3300020165	Seawater	MLCAACILWFGILLNFAILTVQAGLILARLNEENKLAI
Ga0206125_101619532	3300020165	Seawater	MLCAACILWFCTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI
Ga0206125_103411362	3300020165	Seawater	VVSQYHIKKIKIKNMLCAACILWFGILLNFAILTAQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0206127_11531822	3300020169	Seawater	MLCAACILWFGTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI
Ga0206130_102812652	3300020187	Seawater	MLCAACILWFGILLNFAILTVQAGLILARLNEGNMLAIKRQRN
Ga0206130_104174291	3300020187	Seawater	MLCAACILWFGIILNFAILTVQAGLILARLNEENKLAIKRQRN
Ga0211504_10277163	3300020347	Marine	MLCAALILWSGVLLNLAILTVKAGLILARLNEGNKLAIKRQRNWEKII
Ga0211505_10111752	3300020352	Marine	VILQYHSKKFKNMLCAALILWSGVLLNLAILTVKAGLILARLNEGNKLAIKRQRNWEKII
Ga0206678_104349592	3300021084	Seawater	MLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0206682_103201101	3300021185	Seawater	KKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0206123_102873422	3300021365	Seawater	VILRYRSKKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKVI
Ga0222717_104360421	3300021957	Estuarine Water	MLCAACILWFGILLNFAILTVQAGLILARLNEGNKL
Ga0222715_101623581	3300021960	Estuarine Water	ITQKKFKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
(restricted) Ga0233426_100616082	3300022920	Seawater	MLCAACILWFGILLNFAILTMQAGLILARLNEENKLAIKRQRNWEKVI
(restricted) Ga0233432_101199192	3300023109	Seawater	MLCAACILWFGILLNFAILTVQAGLILARLNEGNMLAIKRQRNWEKTI
Ga0228688_1035892	3300023565	Seawater	LCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0228679_10124962	3300023566	Seawater	MLCAACILWSGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0228697_1215062	3300023674	Seawater	MLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKII
Ga0228685_10216462	3300023701	Seawater	VVSQYHIKKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKII
Ga0233399_10194451	3300024231	Seawater	SILWSGGLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0228653_10411382	3300024237	Seawater	IKNMLCAACILWSGILLNFAILTVQAGLILARLNEGNMLAIKRQRNWEKTI
(restricted) Ga0233444_101931361	3300024264	Seawater	MLCAACILWFDTLLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0228661_10351632	3300024266	Seawater	MLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAI
Ga0228660_10384872	3300024291	Seawater	MLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQQNWEK
Ga0244775_105939172	3300024346	Estuarine	IKNMLCAACILWFGILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0244775_112550071	3300024346	Estuarine	MLCVASILWSGGLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0233393_10139842	3300024413	Seawater	VVSQYHIKKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0208148_11278652	3300025508	Aqueous	YHSKKIKNMLCAACILWFGTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKVI
Ga0209405_10234773	3300025620	Pelagic Marine	VVSQYHIKKIKNMLCAACILWFGILLNFAILTAQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0209716_10306171	3300025626	Pelagic Marine	ILLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0209136_10181034	3300025636	Marine	ACILWFGILLNFAILTMQAGLILARLNEENKLAIKRQRNWEKTI
Ga0209251_10245112	3300025668	Marine	MLCAACILWFDTLLNFAPLTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0209306_10306931	3300025680	Pelagic Marine	CILWFGTLLNFAILTLQAGLILARLNEENKLAIKRQRNWEKTI
Ga0209602_10181131	3300025704	Pelagic Marine	MLCAACILWFGTLLNFAILTLQAGLILARLNEENKLAIKR
Ga0208150_10350602	3300025751	Aqueous	MLCAACILWFCTLLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0209137_10297414	3300025767	Marine	CAACILWFDTLLNFAILTVQAGLILARLNEENKLAIKRQRNWEKTI
Ga0209307_10638471	3300025832	Pelagic Marine	FGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0247565_10048933	3300026406	Seawater	LSDVEILLKKKFKNMLCVASILWSGGLLNFAILTVKACLILAKLNEGNKLAIKRQRNWEKII
Ga0247589_10102191	3300026407	Seawater	MLKYYSKKKFKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0247580_10934582	3300026423	Seawater	IAISHKKIKNMLCAASILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0247556_11130821	3300026427	Seawater	SILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0247591_10369162	3300026434	Seawater	MLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWETII
Ga0247577_10273902	3300026437	Seawater	MLKYYSKKKFKNMLCVASILWSGVLLNFATLTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0247600_10151651	3300026461	Seawater	LSDVEILLKKKFKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0247603_10165821	3300026468	Seawater	LLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0228641_10679822	3300026491	Seawater	FKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0228604_10759822	3300026506	Seawater	MLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQ
Ga0208954_10487921	3300027081	Marine	KFKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0208950_10024187	3300027413	Marine	ASILWSGGLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0208948_10730332	3300027501	Marine	MLCVASILWSGGLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKI
Ga0247563_10243491	3300028095	Seawater	MLCAASILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKII
Ga0247586_11159292	3300028102	Seawater	LNFAILTVQAGLILARLNEGNKLAIKRQRNWEKII
Ga0233397_10493701	3300028111	Seawater	IKKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0256417_10544252	3300028233	Seawater	ILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0247597_10410311	3300028334	Seawater	LSGVEILLKKKFKNMLCVASILWSGVLLNFAILTVKAGLILAKLNEGNKLAIKRQRNWEKII
Ga0233394_10660362	3300028391	Seawater	NISLNILSGIAISHKKIKNMLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0228627_10717522	3300028414	Seawater	MLCAASILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0315320_100568952	3300031851	Seawater	MLCAACILWFGILLNFAILTVQAGLILARLNEGNKLAIKRQRNWEKTI
Ga0315315_101979742	3300032073	Seawater	MLCVASILWSGVLLNFAILTVKAGLFLAKLNEGNKLAIKRQRNWEKII
Ga0314692_103150901	3300032754	Seawater	MLCAACILWFVLLLNFAILTMQAGLILARLNEENKLAIKRQRNWEKVI

Hidden Markov Model


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