Metagenome / Metatranscriptome Family F103340

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103340
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	90 residues
Representative Sequence	PVISGLRMGTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVDIATGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE
Number of Associated Samples	93
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	96.04 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.911 % of family members)
Environment Ontology (ENVO)	Unclassified (32.673 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.574 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.70% β-sheet: 36.94% Coil/Unstructured: 60.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
b.68.5.1: YWTD domain	d1npea_	1npe	0.74
b.69.13.0: Oligoxyloglucan reducing end-specific cellobiohydrolase	d6p2la1	6p2l	0.74
b.69.3.1: Nitrous oxide reductase, N-terminal domain	d6y77a1	6y77	0.74
b.68.5.1: YWTD domain	d1npea_	1npe	0.74
b.69.13.0: Oligoxyloglucan reducing end-specific cellobiohydrolase	d6p2la1	6p2l	0.74
b.69.3.1: Nitrous oxide reductase, N-terminal domain	d6y77a1	6y77	0.74
b.68.5.1: YWTD domain	d1ijqa1	1ijq	0.73
b.68.9.1: NHL repeat	d1q7fa_	1q7f	0.73
b.68.5.1: YWTD domain	d1ijqa1	1ijq	0.73
b.68.9.1: NHL repeat	d1q7fa_	1q7f	0.73

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14224	DUF4331	94.06
PF00005	ABC_tran	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.06 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	94.06 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	94.06 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	93.07 %
Unclassified	root	N/A	1.98 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	93.07 %
Unclassified	root	N/A	1.98 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101036414	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300000956\|JGI10216J12902_101307049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1139	Open in IMG/M
3300000956\|JGI10216J12902_117857674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	839	Open in IMG/M
3300000956\|JGI10216J12902_125148758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300004062\|Ga0055500_10185226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300004114\|Ga0062593_101159841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	807	Open in IMG/M
3300004156\|Ga0062589_100983466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	786	Open in IMG/M
3300004463\|Ga0063356_106418594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300004808\|Ga0062381_10261794	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300005332\|Ga0066388_101731774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1107	Open in IMG/M
3300005332\|Ga0066388_104738071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300005337\|Ga0070682_100388375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1052	Open in IMG/M
3300005343\|Ga0070687_100163946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1316	Open in IMG/M
3300005365\|Ga0070688_101425392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300005441\|Ga0070700_101320796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300005444\|Ga0070694_100298499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1234	Open in IMG/M
3300005444\|Ga0070694_101957654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300005468\|Ga0070707_101221292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300005534\|Ga0070735_10788633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300005535\|Ga0070684_100260895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1585	Open in IMG/M
3300005617\|Ga0068859_101389731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	774	Open in IMG/M
3300005718\|Ga0068866_11184169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300005719\|Ga0068861_100242692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1533	Open in IMG/M
3300005764\|Ga0066903_103705616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	822	Open in IMG/M
3300006358\|Ga0068871_100765783	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300006358\|Ga0068871_100900676	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300006755\|Ga0079222_12192425	Not Available	549	Open in IMG/M
3300006845\|Ga0075421_100858371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1040	Open in IMG/M
3300006894\|Ga0079215_10420826	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006894\|Ga0079215_11546240	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300006914\|Ga0075436_101266302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300006954\|Ga0079219_11834555	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300006969\|Ga0075419_11325250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300007076\|Ga0075435_101793503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300007255\|Ga0099791_10581639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300009032\|Ga0105048_10195620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2432	Open in IMG/M
3300009100\|Ga0075418_12715724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300009111\|Ga0115026_10515236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	892	Open in IMG/M
3300009147\|Ga0114129_10594315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1435	Open in IMG/M
3300009167\|Ga0113563_11013614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	956	Open in IMG/M
3300009176\|Ga0105242_11487064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	707	Open in IMG/M
3300009553\|Ga0105249_13270107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300010037\|Ga0126304_11277376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300010041\|Ga0126312_11078994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300010046\|Ga0126384_10498264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1049	Open in IMG/M
3300010360\|Ga0126372_12250299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300010362\|Ga0126377_12744160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300010399\|Ga0134127_10083805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2747	Open in IMG/M
3300010401\|Ga0134121_11958036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300011333\|Ga0127502_11030469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300011414\|Ga0137442_1050019	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	841	Open in IMG/M
3300011438\|Ga0137451_1043021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1320	Open in IMG/M
3300012198\|Ga0137364_11170503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300012908\|Ga0157286_10266358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300012915\|Ga0157302_10477512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300012916\|Ga0157310_10380593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300012930\|Ga0137407_10494374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1142	Open in IMG/M
3300013297\|Ga0157378_10247096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1707	Open in IMG/M
3300014969\|Ga0157376_11379426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	736	Open in IMG/M
3300015200\|Ga0173480_10885862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300015245\|Ga0137409_11161473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300015372\|Ga0132256_101205449	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	870	Open in IMG/M
3300015373\|Ga0132257_103026718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300018432\|Ga0190275_13394780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300018433\|Ga0066667_11558828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300018465\|Ga0190269_10598289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	744	Open in IMG/M
3300018476\|Ga0190274_13189787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300019880\|Ga0193712_1070889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	761	Open in IMG/M
3300023211\|Ga0255842_1296151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1421	Open in IMG/M
3300025899\|Ga0207642_10140307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1273	Open in IMG/M
3300025918\|Ga0207662_10185160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1341	Open in IMG/M
3300025924\|Ga0207694_10934383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300025930\|Ga0207701_10299997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1395	Open in IMG/M
3300025936\|Ga0207670_11118739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300026095\|Ga0207676_11723411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300027877\|Ga0209293_10119860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1217	Open in IMG/M
3300027878\|Ga0209181_10467469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	985	Open in IMG/M
3300027909\|Ga0209382_10560147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1250	Open in IMG/M
3300027915\|Ga0209069_10547579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300028381\|Ga0268264_11815264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300028381\|Ga0268264_12023750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300028812\|Ga0247825_10638366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	764	Open in IMG/M
3300031720\|Ga0307469_12013688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300031726\|Ga0302321_101463364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300031858\|Ga0310892_10118830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1481	Open in IMG/M
3300031892\|Ga0310893_10457961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300031902\|Ga0302322_102827351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300031908\|Ga0310900_10696405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	813	Open in IMG/M
3300031940\|Ga0310901_10321807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300031944\|Ga0310884_10655774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300031996\|Ga0308176_11483852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300032002\|Ga0307416_101997665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300032180\|Ga0307471_100226580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1899	Open in IMG/M
3300032892\|Ga0335081_10029620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8804	Open in IMG/M
3300033412\|Ga0310810_11437562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300033413\|Ga0316603_10754881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	911	Open in IMG/M
3300033414\|Ga0316619_10095866	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1881	Open in IMG/M
3300033482\|Ga0316627_101439690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	694	Open in IMG/M
3300033557\|Ga0316617_102418212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300034817\|Ga0373948_0102619	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.27%
Host-Associated	Host-Associated	25.74%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.38%
Plants	Host-Associated → Plants	25.74%
Aquatic	Environmental → Aquatic	10.89%
Wastewater	Engineered → Wastewater	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.91%
Freshwater	Environmental → Aquatic → Freshwater	6.93%
Sediment	Environmental → Aquatic → Sediment	2.97%
Peat	Environmental → Terrestrial → Peat	1.98%
Roots	Host-Associated → Plants → Roots	1.98%
Marine	Environmental → Aquatic → Marine	0.99%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.58%
Loam	Environmental → Terrestrial → Soil → Loam	13.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Ice	Environmental → Aquatic → Freshwater → Ice	1.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.98%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.99%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.99%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300023211	Activated sludge enriched bacterial communities from WWTP in Fort Collins, Colorado, USA ? CA	Engineered	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1010364141	3300000956	Soil	GSAANEVVSDLRMGTFGGVSLTAGGGVAVMPTVDADGRGQLTSVEIASGTMQQLATPELVDPSGLRTARKAGVFAVVDSEGGAIYRAE*
JGI10216J12902_1013070491	3300000956	Soil	NLRMGTTGGVSLTAGGGTAVMPTKDADGNAQLTSVNIATGETVQLAAPDMTDPSGLRTARGAGVFAVVDSEAGTIYRAE*
JGI10216J12902_1178576741	3300000956	Soil	WAIPADGSAATAVISDLRMGTTGGVSLTAGGGTAVMPTKDIDGNAQLTSVNITTGETIQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE*
JGI10216J12902_1251487582	3300000956	Soil	AAGADGEGVLFAIPSDGSAATEVISDLKMGTLGGVSLTAGGGVAVMPTLDSEGRGQLTSVEISTGEKQQLATPDIIDPAGLRTARRAAVFAVVDSEGGAIYRAE*
Ga0055500_101852261	3300004062	Natural And Restored Wetlands	IPSDGSAANVVIDGLRMGTPGGVSLTAGGGVAVMPTLDAEGHAQLTSVVIDTGEMKQLAAPDLIDPAGLRTARQAGVFAVVDSEGGAIYRAE*
Ga0062593_1011598412	3300004114	Soil	GLHVDDDGVHWVMDHRAFGAAGEGVLWAIQSDGSAVTEVASDLRMGTPGGVSLTAGGGTAVMPTRDRDGNSQLTTVHITTGETTQVAAPDMIDPAGLRTAREAGVFAVVDSEGGAIYRAQ
Ga0062589_1009834661	3300004156	Soil	AAGDQGEGVLWAIPADGSVATAVISNLRMGTTGGVSLTAGGGTAVMPTKDADGNAQLTSVNIASGETVQLAAPDMIDPSGLRTARGAGVFAVVDSEAGTIYRAE*
Ga0063356_1064185942	3300004463	Arabidopsis Thaliana Rhizosphere	VSLTAGGGVAVMPTVDGDGRGQLTSVEIKSGEMKQLSTPDLIDPSGLRTAREAAVFAVVDSEGGAIYRAE*
Ga0062381_102617941	3300004808	Wetland Sediment	SPGAAGEGVLFAIPADGSRATEVISNLLMGTTGGVSLTAGGGTAVMPTKDADGNSQLTSVNIKTGETIQLAAPDMIDPSGLRTARKAGVFAVVDSEAAAIYRAE*
Ga0066388_1017317742	3300005332	Tropical Forest Soil	PGGVSLTAGGGTAVMPTTSADGKGQLTSVVIKTGERADLAADEMIDPAGLRTARKAGVFALVDSEGNAIFSAE*
Ga0066388_1047380711	3300005332	Tropical Forest Soil	SKATEVMSSLRLGTPGGCSLTAGGGTAVMPTRDADGNSQLTTVRLATGDVEQIPIPEVADATGVRTARKAGVFALVDSSAGKIFIAQ*
Ga0070682_1003883752	3300005337	Corn Rhizosphere	AATEVASGLKMGTPGGVSLTAGGGTAVMPTRDADGNAQLTSVDIATGQVTNLAAPGMADPAGLRSARKASVFAVVDSEAGTIYRAE*
Ga0070687_1001639461	3300005343	Switchgrass Rhizosphere	SDLRMGTPGGVSLTSGGGIAVMPTRDADGHARLTSVEIATGERQELATPDITDPAGLRTARDAAVFAVVDSEGGAIYRAE*
Ga0070688_1014253922	3300005365	Switchgrass Rhizosphere	TAVMPTRDASGNGQLTSVNIKTGETTQLPAPDMMDPAGLRTARQAGVFAVVDSEGGAIYRAE*
Ga0070700_1013207961	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	QSDGSKATEVMSSLRMGTPGGCSLTAGGGTAVMPTRDADGNAQLTTVQLATGEVEQIAMPGVADPTGVRTARKAGVFALVDSSAGKIFIAQ*
Ga0070694_1002984991	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GSKATEVMSSLRMGTPGGCSLTAGGGTAVMPTRDADGNAQLTTVQLATGEVEQIAMPGVADPTGVRTARKAGVFALVDSSAGKIFLAR*
Ga0070694_1019576541	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VVDDLRMGTPGGVSLTAGGGTAVMSTQNEDGASQLTAVEIESGTITQIPATGIVAPAGLRTAREAGVFAVVDADGSAIYSAR*
Ga0070707_1012212921	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DGSKATEVMSSLRMGTPGGCSLTAGGGTAIMPTRDADGNAQLTSVQLATGETEQLAIPDVTDPAGVHTARKAGVFALVDSSAGKIFLAR*
Ga0070735_107886331	3300005534	Surface Soil	GGTAVMPTRDENGAAQLTSVDIATGAVTQLPLPDMADPAGLRTARKAGVFALIGSEDGAVYRAE*
Ga0070684_1002608951	3300005535	Corn Rhizosphere	GGGTAVMPTRDENGAAQLTSVDIATGAVTQLPTPDMAAPAGLRTARKAGVFVVVDAEAGTIYRAE*
Ga0070696_1016029882	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QGADGQGVLFRISMGGAPMEVVSDLHLGTPGGVSLTAGGGNAVITGRDASGAGQLTIVNIASGARSELAAPGMVDPAGLRTARGAGVFAVADSEGGAIFRAE*
Ga0068859_1013897312	3300005617	Switchgrass Rhizosphere	SNLRMGTPGGVSLTAGGGTAVMPTRDESGNAQLTSVNIKSGEATQLAAPGMIDPAGLRTARGAGVFAIVDSEGGAIFRAE*
Ga0068866_111841691	3300005718	Miscanthus Rhizosphere	RMGTPGGVSLVAGGGTAVMPTLDASGKGQLTAVDIATGETTQIPATDMLEPAGLRTAREAGVFAVVDAEGGAIYRAE*
Ga0068861_1002426922	3300005719	Switchgrass Rhizosphere	AGGGTAVMPTRDESGNAQLTSVNIKSGEATQLAAPGMIDPAGLRTARGAGVFAIVDSEGGAIFRAE*
Ga0066903_1037056162	3300005764	Tropical Forest Soil	GSSGEGVLFAIPSDGSSATEVVSDLRMGTPGGVSLTAGGGTAVMPTIGHDGKGQLTAVDIKSGERTEIAAPDMLDPAGLRTARKAGVFAVVDSEGGAIFRAE*
Ga0068871_1007657831	3300006358	Miscanthus Rhizosphere	LRMGTPGGVSLTAGGGTAVMPTRDHDGNAQITSVNIASGEMTQLAAPDMIDPAGLRTARKAGVFAIVDSEGGAIYRADN*
Ga0068871_1009006762	3300006358	Miscanthus Rhizosphere	NGEGVLFAIPSDGSSATEVVSDLRMGTPGGVSLTAGGGTAVMPTVDADGHGQLTAVNIKSGERTDIPAAMITDPAGLRTARKAGVFAVVDSEGGAIYRAE*
Ga0079222_121924251	3300006755	Agricultural Soil	VISDLKMGTLGGVSLTSGGGVAVMPTLDADGHGQLTSVEIASGEKQQLATPDILDPAGLRTARKAAVFAVVDSEGGAIYRAE*
Ga0075421_1008583712	3300006845	Populus Rhizosphere	HVDNDGVALVMDHLAAGAKGEGVLWAITSDGSKCDEVASDLKMGTPGGVSLTAGGGTAVIPTVDGTGKGQLTTVSIKTGEVGQVAAPDMIEPAGLRTARKAGVFAVVDSEGGAIYSAK*
Ga0079215_104208262	3300006894	Agricultural Soil	SPTGMYVDNDGVTWLLDHRASGAGGEGVLWAIPEDGSAANEVAGGLRLGTTGGCSLTAGGGTAVIPTKDADGTSQLTSINISTGEIQQLAAPDIQDPSGLRTAREAGVFAVVDSEAGAIYRAE*
Ga0079215_115462401	3300006894	Agricultural Soil	GCSLTAGGGTAVIPTRDAEGNAQLTSVNIASGEAVQTPAPGMIDPAGLRTARNAGVFAVVDSEGGAIYRAE*
Ga0075436_1012663022	3300006914	Populus Rhizosphere	EGVLWAIPGDGSKATEVASDLAMGTPGGVSLTAGGGTAVMPTRDKNGQGQLTTVNISTGEVNQVPTPTIADPAGLRTARKAGVFAVVDSETGAIYRAE*
Ga0079219_118345552	3300006954	Agricultural Soil	WVMDNRAHGDAGEGVLFAIPRDGSAATPVASGLRMGTPGGVSLTAGGGTAVMPTRDADGNAQLTSVNIKSGEAVQTAAPGMIDPAGLRTARGANVFAVVDSEGGAIYRAE*
Ga0075419_113252501	3300006969	Populus Rhizosphere	LTAGGGVAVMPTIDADGHGQLTSVEIASGMMQQLATPELIDPSGLRTARKAGVFAVVDSEGGAIYRAE*
Ga0075435_1017935031	3300007076	Populus Rhizosphere	MGTPGGVSLTAGGGTAVMPTTGADGKGQLTSVVIKTGERADLAAPDMVDPAGLRTARKAGVFAVVDSEGGAIYRAE*
Ga0099791_105816392	3300007255	Vadose Zone Soil	GTPGGVSLTAGGGTAVMPTRDDDGAAQLTSVDIASGEVKQLAAPDLIDPAGLRTARGAGVFAVVDSEGGAIYRAE*
Ga0105048_101956204	3300009032	Freshwater	LAHGANGEGILFAIPSDGSAATEVVSNLKMGTPGGVSLTAGGGTAVMPTHDEEGRAQLTSVDIATGEMQQLSTPDIVDVGGLRTAREAGVFAVVDTEAGAIYRAE*
Ga0075418_127157241	3300009100	Populus Rhizosphere	AGGGTAVIPTVDGTGKGQLTTVSIKTGEVGQVAAPDMIEPAGLRTARKAGVFAVVDSEGGAIYSAK*
Ga0115026_105152362	3300009111	Wetland	GTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVDIATGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE*
Ga0114129_105943152	3300009147	Populus Rhizosphere	WVMDHRSAGAQGEGVLFAIPQDGSAANEVISDLRMGTFGGVSLTAGGGVAVMPTIDADGHGQLTSVEIASGMMQQLATPELIDPSGLRTARQAGVFAVVDSEGGAIYRAE*
Ga0113563_110136141	3300009167	Freshwater Wetlands	VTWLMDHRAAGEQGEGMLWAIPADGSAATPVISGLRMGTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVDIATGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE*
Ga0105242_114870642	3300009176	Miscanthus Rhizosphere	AVMPTRDENGAAQLTSVDIATGAVTQLPLSGMTDPAGLRTARKAGVFALIGSEDGAVYRAE*
Ga0105249_132701071	3300009553	Switchgrass Rhizosphere	GSKATVVVSNLRMGTPGGVSLTAGGGTAVMPTRDAEGNAQLTSVDIATGAMTQLPAPGMTDPAGLRSARKAGVFVVVDSGAGTIYRAE*
Ga0126304_112773762	3300010037	Serpentine Soil	LWGVFVLSPWVMDHLAHGASGEGVLFAIPADGSAATEVVSDLRMGTPGGVSLTAGGGTAVMPTRDADGHAQLTSVNIASGEMTQLAAPDMVDPAGLRSARKAGVFAVVDSEAGAFYRAECEQGATSL*
Ga0126312_110789941	3300010041	Serpentine Soil	AGDQGEGVLFAIPQDGSSAKPVISDLRMGTFGGVSLTAGGGVAVMPTIDGDGKGQLTSVVIASGEMQTLAAPDLLDPSGLRTARRAAVFAVVDSEGGAIYRAE*
Ga0126384_104982642	3300010046	Tropical Forest Soil	TPGGVSLTAGGGTAVMPTHDENGAAQLTSVDIATGAVTQLPTPDMADPAGLRTARKAGVFVVVDSEAGTIYRAE*
Ga0126372_122502991	3300010360	Tropical Forest Soil	WVMDHLAAGAQGEGVLWAIPSDGSAATEVASGLKMGTPGGVSLTAGGGTAVMPTTSADGKGQLTSVVIKTGERADLAADEMIDPAGLRTARKAGVFALVDSEGNAIFSAE*
Ga0126377_127441601	3300010362	Tropical Forest Soil	EVASDLKMGTPGGVSLTAGGGTAVMPTVDAAGKGQLTTVSIKTGEVAQLAAPDIIDPAGLRTARKAGVFAVVDSEGGAIYRAE*
Ga0134127_100838051	3300010399	Terrestrial Soil	MSSLRMGTPGGCSLTAGGGTAVMPTRDADGNAQLTTVQLATGEVEQIAMPGVADPTGVRTARKAGVFALVDSSAGKIFIAQ*
Ga0134121_119580362	3300010401	Terrestrial Soil	SNLRMGTPGGVSLTAGGGTAVMPTVDAEGNAQLTSVDIASGEVKQLPTPDMAYPAGLRTARNAGVFVVFDAEKDTIYSAH*
Ga0127502_110304691	3300011333	Soil	MDHRAAGAQGEGVLFAIPQDGSAANEVISDLRMGTFGGVSLTAGGGVAVMPTLDAEGRGQLTSVEIASGDMQQLAAPDLIDPSGLRTARKAGVFAVVDSEGGAIYRAE*
Ga0137442_10500191	3300011414	Soil	AATEVMSDLRMGTPGGVSLTAGGGTAVMPTRDADGNAQLTSVDIASHRVTQLPTPDMADPAGLRTARKAGVFVVVDAEAGSIYRAE*
Ga0137451_10430212	3300011438	Soil	AQGPDGEGVLFAIPSDGSKADPVISNLRMGTPGGVSLTAGGGTAVMPTRDADGNAQLTSVDIATGEVTQLAAPGMADPAGLRSARKAGVFAVVDSEAGTIYRAE*
Ga0137364_111705031	3300012198	Vadose Zone Soil	SLTAGGGTAVMPTLDHDGHAQLTTVHIASGAMEQVPAPDMIDPAGLRTAREAGVFAVVDSEGGAIYRAE*
Ga0157286_102663581	3300012908	Soil	TITPVISDLRMGSPGGVSLTAGGGTAVMPTRDVSGNAQLTSVNIKTGETVQTPAPEMLDPAGLRTARKAGVFAVVDSEGGAIYRAE*
Ga0157302_104775121	3300012915	Soil	VISDLRMGTFGGVSLTAGGGTAVMPTIDAEGHGQLTSVEIASGTIEQLATPELIDPSGLRTARNAGVFAVVDSEGGAIYSAK*
Ga0157310_103805932	3300012916	Soil	MDHRAAGDAGEGVLWAIPADGSAATSVISGLHMGTTGGVSLTAGGGTAVMPTKDADGNSQLTSVNILTGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE*
Ga0137407_104943741	3300012930	Vadose Zone Soil	HMGTPGGVSLTAGGGTAVIPTRDDHGQGQLTSVEIATGEMQQLSTPDIQDPAGLRTARQAGVFAVVDSEGGAIYRAE*
Ga0157378_102470962	3300013297	Miscanthus Rhizosphere	FAIPSDGSAVTEVASNLRMGTPGGVSLVAGGGTAVMPTLDATGKGQLTAVDIATGETTQIPATDMLEPAGLRTAREAGVFAVVDAEGGAIYRAE*
Ga0157376_113794261	3300014969	Miscanthus Rhizosphere	TDGVSWVMDHLAHGAAGEGVLFAIPADGSGATEVVSDLRMGTPGGVSLTAGGGTAVMPTRDHDGNAQITSVNIASGEMSQLAAPDMIDPAGLRTARKAGVFAIVDSEGGAIYRADN*
Ga0173480_108858621	3300015200	Soil	AAGDAGEGVLWAIPADGSAATSVISGLHMGTTGGVSLTAGGGTAVMPTKDADGNSQLTSVNILTGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE*
Ga0137409_111614731	3300015245	Vadose Zone Soil	SNLQMGTPGGCSLTAGGGTAVVPTRDADGNAQLTSVDIATGEVAQLATPGLRDPAGVRTARNAGVFVVVDSGAGKIFSAN*
Ga0132256_1012054492	3300015372	Arabidopsis Rhizosphere	VSLVAGGGTAGMPTLDRDGKAPLTSVDIATGAMQQLSVPEMIDPAGLRTARKAGVFAVVDSEGGAIYRAE*
Ga0132257_1030267182	3300015373	Arabidopsis Rhizosphere	DLRMGTPGGVSLTAGGGTAVMPTVDASGHGQLTSVEIASGEKQQLATPDIIDPAGLRTARKAAVFAVVDSEGGAIYRAE*
Ga0190275_133947801	3300018432	Soil	AIPADGSAANEVASDLRMGTTGGCSLTAGGGTAVIPTKDVDGNSQLTSINIATGEKTQLATPDIQDGSGLRTAREAGVFAVVDSEAAAIYRAE
Ga0066667_115588281	3300018433	Grasslands Soil	NEVVSNLRMGTFGGVSLTAGGGTAVMPTLDADGHGQLTSVEIETGEKQQLATPDLIDPSGLRTARRAAVFAVVDSEGGAIYRAE
Ga0190269_105982891	3300018465	Soil	AIREDGSAATEVVSDLRMGTFGGVSLTAGGGVAVMPTIDADGKGQLTSVEIASGMMQQLATPELIDPAGLRTARQAGVFAVVDSEGGAIYRAE
Ga0190274_131897871	3300018476	Soil	PTGLHVDNDGVSWLMDHRAAGEAGEGILWAIPADGSAATAVISGLRMGTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVNITTGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE
Ga0193712_10708892	3300019880	Soil	ADGGTASEVVSNLQMGTPGGCSLTAGGGTAVVPTRDADGNAQLTSVDVATGEVAQLATPGLTDPAGVRTARNAGVFVIVDSGAGKIFSAK
Ga0255842_12961511	3300023211	Activated Sludge	GTPGGVSLTAGGGTAVMPTRDADGHAQLTSVVIETGEMQQLANPEISEPAGLRTARKAAVFAVVDSEGGAIYRAE
Ga0207642_101403071	3300025899	Miscanthus Rhizosphere	AIPSDGSAAGEVASNLRMGTPGGVSLTAGGGTAVMATRDADGHGQLTTVDIASGELAQLPVPEIKDPAGLRTARQAGVFAIVDSESAAIFRAQ
Ga0207662_101851602	3300025918	Switchgrass Rhizosphere	VVSDLRMGTPGGVSLTSGGGIAVMPTRDADGHARLTSVEIATGERQELATPDITDPAGLRTARDAAVFAVVDSEGGAIYRAE
Ga0207694_109343832	3300025924	Corn Rhizosphere	AVTEVASTLRMGTPGGVSLVAGGGTAVMPTLDATGKGQLTAVDIATGETTQIPATDMLEPAGLRTAREAGVFAVVDAEGGAIYRAE
Ga0207701_102999971	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	EGEGVLFAIPSDGSAANEVISDLKMGTLGGVSLTAGGGVAVMPTVDADGHGQLTSVEIATGEKQQLATPDIIDPAGLRTARQAAVFAVVDSEGGAIYRAE
Ga0207670_111187392	3300025936	Switchgrass Rhizosphere	SDGSGGATEVASGLKMGTPGGVSLTAGGGTAVMPTTGADGKGQLTSVVIKTGERADLAAPDMLDPAGLRTARKAGVFAVVDSEGGAIYRAE
Ga0207676_117234112	3300026095	Switchgrass Rhizosphere	ATVVVSNLRMGTPGGVSLTAGGGTAVMPTRDADGNAQLTSVDIATGAITQLPAPDMADPAGLRSARKAGVFAVVDSEAGKIYRAE
Ga0209293_101198602	3300027877	Wetland	PVISGLRMGTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVDIATGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE
Ga0209181_104674692	3300027878	Freshwater	ANGEGILFAIPSDGSAATEVVSNLKMGTPGGVSLTAGGGTAVMPTHDEEGRAQLTSVDIATGEMQQLSTPDIVDVGGLRTAREAGVFAVVDTEAGAIYRAE
Ga0209382_105601472	3300027909	Populus Rhizosphere	WVMDHLAAGAKGEGVLWAITSDGSKCDEVASDLKMGTPGGVSLTAGGGTAVIPTVDGTGKGQLTTVSIKTGEVGQVAAPDMIEPAGLRTARKAGVFAVVDSEGGAIYSAK
Ga0209069_105475791	3300027915	Watersheds	VSLTAGGGTAVMPTRDENGHSQLTSVVIETGEVQQLATPDISDPGGLRTATKASVFAVVDTEGGAIYRAD
Ga0268264_118152641	3300028381	Switchgrass Rhizosphere	VSWVMDNRAHGTSGEGVLFAINRDGSSATEVASGIRMGTPGGVSLTAGGGTAVMLSRDESGNAQLTSVNIKSGEMVQTSAPGMIDPAGLRTARKANVFAVVDSEGGAIYRAE
Ga0268264_120237501	3300028381	Switchgrass Rhizosphere	KATEVMSNLRMGTPGGVSLTAGGGTAVMPTVDAEGNAQLTSVDIASGEVKQLPTPDMAYPAGLRTARNAGVFVVVDAEKDTIYSAH
Ga0247825_106383661	3300028812	Soil	AIGEGVLIAIPAHGSTATEVASDLRMGTPGGVSLTSTGGAAVIATRDIDGRTQLTTIVISTGELQQLATPDITDPAGIRTAKKAAVLAVVDSEGGAIYRAE
Ga0307469_120136881	3300031720	Hardwood Forest Soil	MDHLAVGNDGEGVLFSVDSSGATEIASDLRMGTPGGVSLTAGGGVAVMPTVDHGGNAQLTSVVIATGEMSQLPAPDMIDPSGLRTARSAGVFAVVDSEGGAIYRAQ
Ga0302321_1014633642	3300031726	Fen	TPGGVSLTAGGGTAVMPTRDDDGHAQLTSVDIATGEITQLPTPDLAGPAGLRSARSAGVLAVVDSESAAIYLAE
Ga0310892_101188301	3300031858	Soil	LFAIPSDGSSATPVISNLDMGTFGGVSLTAGGGVAVMPTLDADGNAQLTSVDIKSGEMAQLSAPDMIDPSGLRTAREAAVFAVVDSEGGAIYRAE
Ga0310893_104579611	3300031892	Soil	SAATEVISDLRMGTFGGVSLTAGGGVAVMPTIDADGHGQLTSVEIESGMMQQLAAPELIDPAGLRTARGAGVFAVVDSEGGAIYRAE
Ga0302322_1028273512	3300031902	Fen	EGEGVLFAIPSDGSAATEVASNLRMGSPGGVSLTAGGGTAVMPTRDDDGHAQLTSVVIETGEKQQLATPDISDPGGLRTARKASVFAVVDTEGGAIYRAE
Ga0310900_106964051	3300031908	Soil	MGTFGGVSLTAGGGVAVMPTIGADGTGQLTSVDIKSGEMAQLSAPDMIDPSGLRTAREAAVFAVVDSEGGAIYRAE
Ga0310901_103218072	3300031940	Soil	GVLFAIPSDGSTATPVISNLDMGTFGGVSLTAGGGVAVMPTIGADGTGQLTSVDIKSGEMAQLSAPDMIDPSGLRTAREAAVFAVVDSEGGAIYRAE
Ga0310884_106557742	3300031944	Soil	DHRAIGEAGEGVLFAIPSDGSSATPVISNLDMGTFGGVSLTAGGGVAVMPTIGPDGKGQLTSVDIKSGEMAQLSAPDMIDPSGLRTAREAAVFAVVDSEGGAIYRAE
Ga0308176_114838522	3300031996	Soil	SNLRMGTPGGVSLTAGGGTAVMPTRDADGNAQLTTVDIATGEVRQLPTPDLTDPAGLRTARNAGVFAVVDAESATIYSAH
Ga0307416_1019976652	3300032002	Rhizosphere	GSAATEVVSDLRMGTPGGVSLVAGGGTAVMPTRDADGRAQLTSVVITTGEMQQLATPDITDVGGLRTARGAAVFAVVDTEGGAIYRAE
Ga0307471_1002265801	3300032180	Hardwood Forest Soil	MGTPGGVSLTAGGGTAVMPTRDENGAAQLTSVNIATGAVTQLPIPDMADPAGLRTARKAGVFALVGAEDGTIYRAE
Ga0335081_100296209	3300032892	Soil	IPSDGSAATEVASDLRMGTPGGVSLTAGGGVAVIPSVDHDGNAQLTSIVIATGEMDQLAMPDLVDPAGLRTARRAGVFAVVDSEGGAIYRAE
Ga0310810_114375621	3300033412	Soil	GEGVLFAIPQDGSKADEVISDLRMGTFGGVSLTAGGGTAVMPTVDADGHGQLTSVEIASGMMQQLAAPELIDPSGLRTARKAGVFAVVDSEGGAIYSAK
Ga0316603_107548812	3300033413	Soil	RAAGEQGEGMLWAIPADGSAATPVISGLRMGTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVNIATGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE
Ga0316619_100958661	3300033414	Soil	RMGTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVNIATGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE
Ga0316627_1014396901	3300033482	Soil	VSPTGMYVDNDGVTWLLDHRAAGAAGEGVLWAIPADGSAASPVISNLRMGTTGGVSLTAGGGTAVMPTKDVDGNSQLTSVDIATGETVQLAAPDMTDPSGLRTARDAGVFAVVDSEAGAIYRAE
Ga0316617_1024182121	3300033557	Soil	HRAAGEQGEGMLWAIPADGSAATPVISGLRMGTTGGVSLTAGGGTAVMPTKDVDGNAQLTSVDIATGETVQLAAPDMTDPSGLRTAREAGVFAVVDSEAGAIYRAE
Ga0373948_0102619_450_674	3300034817	Rhizosphere Soil	TPGGCSLTAGGGTAIMPTRDADGNAQLTSVQLATGETEQLAIPDVTDPAGVHTARKAGVFALVDSSAGKIFLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103340

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences