Metagenome / Metatranscriptome Family F102913

Basic Information
Family ID	F102913
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	42 residues
Representative Sequence	MDKALVPVRDLTDPDQNQAVLDVASALVEGRAAAGRVAGS
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.00 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	93.07 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (67.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (32.673 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.545 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.24% β-sheet: 0.00% Coil/Unstructured: 61.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02727	Cu_amine_oxidN2	4.95
PF00440	TetR_N	4.95
PF01979	Amidohydro_1	3.96
PF04978	DUF664	3.96
PF07676	PD40	3.96
PF00202	Aminotran_3	3.96
PF09587	PGA_cap	1.98
PF02728	Cu_amine_oxidN3	1.98
PF01471	PG_binding_1	1.98
PF02852	Pyr_redox_dim	1.98
PF00106	adh_short	1.98
PF13581	HATPase_c_2	0.99
PF01797	Y1_Tnp	0.99
PF06897	DUF1269	0.99
PF01409	tRNA-synt_2d	0.99
PF01799	Fer2_2	0.99
PF13649	Methyltransf_25	0.99
PF12840	HTH_20	0.99
PF00465	Fe-ADH	0.99
PF06197	DUF998	0.99
PF03171	2OG-FeII_Oxy	0.99
PF13676	TIR_2	0.99
PF12697	Abhydrolase_6	0.99
PF07690	MFS_1	0.99
PF01568	Molydop_binding	0.99
PF12006	DUF3500	0.99
PF10604	Polyketide_cyc2	0.99
PF12894	ANAPC4_WD40	0.99
PF13545	HTH_Crp_2	0.99
PF11066	DUF2867	0.99
PF01557	FAA_hydrolase	0.99
PF01152	Bac_globin	0.99
PF00196	GerE	0.99
PF05016	ParE_toxin	0.99
PF13336	AcetylCoA_hyd_C	0.99
PF00282	Pyridoxal_deC	0.99
PF05977	MFS_3	0.99
PF01936	NYN	0.99
PF09084	NMT1	0.99
PF07992	Pyr_redox_2	0.99
PF02566	OsmC	0.99
PF03737	RraA-like	0.99
PF04286	DUF445	0.99
PF00271	Helicase_C	0.99
PF02826	2-Hacid_dh_C	0.99
PF01740	STAS	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	6.93
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.99
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.99
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.99
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.99
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.99
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.99
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.99
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.99
COG2024	O-phosphoseryl-tRNA(Cys) synthetase	Translation, ribosomal structure and biogenesis [J]	0.99
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.99
COG0016	Phenylalanyl-tRNA synthetase alpha subunit	Translation, ribosomal structure and biogenesis [J]	0.99
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.99
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.99
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.99
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.99
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.99
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.99
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.99
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.99
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.33 %
Unclassified	root	N/A	32.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.33 %
Unclassified	root	N/A	32.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.33 %
Unclassified	root	N/A	32.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.40 %
Unclassified	root	N/A	32.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.46 %
Unclassified	root	N/A	32.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.60 %
Unclassified	root	N/A	32.67 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.98 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.99 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	7.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.97 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.98 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.98 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.99 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.99 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.99 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.96 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	3.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.97 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.98 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	1.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.98 %
Ornithinimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae	0.99 %
unclassified Propionibacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales	0.99 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.99 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.99 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.99 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.99 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.99 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	3.96 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.96 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	2.97 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.98 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	1.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.98 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.99 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.99 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.99 %
Frigoribacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium	0.99 %
Ornithinimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium	0.99 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.99 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.99 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Amycolatopsis azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	3.96 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	3.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.96 %
Nonomuraea candida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	2.97 %
unclassified Cellulomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas	1.98 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.98 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.99 %
unclassified Frigoribacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium	0.99 %
unclassified Ornithinimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium	0.99 %
Streptomyces alboflavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	0.99 %
Nocardioides agariphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus	0.99 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.99 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.99 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.99 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.67 %
Amycolatopsis azurea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	3.96 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	3.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.96 %
Nonomuraea candida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	2.97 %
Cellulomonas sp. P24	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. P24	1.98 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.98 %
Ornithinimicrobium sp. INDO-MA30-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. INDO-MA30-4	0.99 %
Frigoribacterium sp. ACAM 257	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium → Frigoribacterium sp. ACAM 257	0.99 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.99 %
Streptomyces alboflavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	0.99 %
Nocardioides agariphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus	0.99 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.99 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.99 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.99 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10107590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	606	Open in IMG/M
3300002245\|JGIcombinedJ26739_100291599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300002245\|JGIcombinedJ26739_100517109	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300002245\|JGIcombinedJ26739_100767418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	844	Open in IMG/M
3300002245\|JGIcombinedJ26739_101721238	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300004973\|Ga0072322_1333336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1893	Open in IMG/M
3300005363\|Ga0008090_15426100	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300005602\|Ga0070762_10740431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300005614\|Ga0068856_100180976	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300005898\|Ga0075276_10108249	Not Available	617	Open in IMG/M
3300006796\|Ga0066665_10999015	Not Available	642	Open in IMG/M
3300006852\|Ga0075433_11158159	Not Available	672	Open in IMG/M
3300006903\|Ga0075426_10626140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300009545\|Ga0105237_12538561	Not Available	523	Open in IMG/M
3300010046\|Ga0126384_10525697	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1024	Open in IMG/M
3300010048\|Ga0126373_10161938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus	2137	Open in IMG/M
3300010359\|Ga0126376_12746505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300010366\|Ga0126379_10721404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	1092	Open in IMG/M
3300011107\|Ga0151490_1751893	Not Available	892	Open in IMG/M
3300012096\|Ga0137389_10278379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1412	Open in IMG/M
3300012957\|Ga0164303_10389081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300012971\|Ga0126369_10500123	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300012971\|Ga0126369_12417901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300012971\|Ga0126369_12936262	Not Available	558	Open in IMG/M
3300013104\|Ga0157370_10942069	Not Available	783	Open in IMG/M
3300014052\|Ga0120109_1124555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300014165\|Ga0181523_10451700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. P24	713	Open in IMG/M
3300014655\|Ga0181516_10074758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300014745\|Ga0157377_10964135	Not Available	643	Open in IMG/M
3300014968\|Ga0157379_10917237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	832	Open in IMG/M
3300016357\|Ga0182032_10451837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300016357\|Ga0182032_11144248	Not Available	668	Open in IMG/M
3300016422\|Ga0182039_10727073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	877	Open in IMG/M
3300016445\|Ga0182038_10103674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2073	Open in IMG/M
3300017821\|Ga0187812_1004240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4961	Open in IMG/M
3300017924\|Ga0187820_1132365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300017928\|Ga0187806_1387754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300017933\|Ga0187801_10053223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1475	Open in IMG/M
3300017970\|Ga0187783_10177812	Not Available	1566	Open in IMG/M
3300017972\|Ga0187781_10975191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	619	Open in IMG/M
3300017974\|Ga0187777_11021303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300018001\|Ga0187815_10111253	Not Available	1155	Open in IMG/M
3300018038\|Ga0187855_10153559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. P24	1372	Open in IMG/M
3300020082\|Ga0206353_11354648	Not Available	549	Open in IMG/M
3300021181\|Ga0210388_11108288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300021377\|Ga0213874_10145584	Not Available	823	Open in IMG/M
3300025952\|Ga0210077_1086843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300026494\|Ga0257159_1033708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	855	Open in IMG/M
3300026498\|Ga0257156_1046273	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300027110\|Ga0208488_1034965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	915	Open in IMG/M
3300027432\|Ga0209421_1060976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	757	Open in IMG/M
3300027619\|Ga0209330_1031090	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300027641\|Ga0208827_1022052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2342	Open in IMG/M
3300028138\|Ga0247684_1043243	Not Available	725	Open in IMG/M
3300028450\|Ga0189898_1001544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1978	Open in IMG/M
3300028779\|Ga0302266_10309084	Not Available	577	Open in IMG/M
3300028906\|Ga0308309_11813729	Not Available	516	Open in IMG/M
3300029988\|Ga0302190_10316366	Not Available	608	Open in IMG/M
3300030580\|Ga0311355_11226671	Not Available	661	Open in IMG/M
3300031544\|Ga0318534_10211446	Not Available	1119	Open in IMG/M
3300031544\|Ga0318534_10762910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	544	Open in IMG/M
3300031572\|Ga0318515_10767990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	509	Open in IMG/M
3300031681\|Ga0318572_10712904	Not Available	597	Open in IMG/M
3300031708\|Ga0310686_119787774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	698	Open in IMG/M
3300031713\|Ga0318496_10249275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	979	Open in IMG/M
3300031720\|Ga0307469_11472414	All Organisms → cellular organisms → Bacteria → Terrabacteria group	651	Open in IMG/M
3300031723\|Ga0318493_10769516	Not Available	541	Open in IMG/M
3300031744\|Ga0306918_10561320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. INDO-MA30-4	895	Open in IMG/M
3300031771\|Ga0318546_11327659	Not Available	505	Open in IMG/M
3300031792\|Ga0318529_10375419	Not Available	662	Open in IMG/M
3300031820\|Ga0307473_11400969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300031831\|Ga0318564_10062922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1628	Open in IMG/M
3300031831\|Ga0318564_10394038	Not Available	606	Open in IMG/M
3300031832\|Ga0318499_10054445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1500	Open in IMG/M
3300031833\|Ga0310917_10890165	Not Available	599	Open in IMG/M
3300031833\|Ga0310917_11081147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	536	Open in IMG/M
3300031859\|Ga0318527_10477300	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300031879\|Ga0306919_11082107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300031893\|Ga0318536_10262225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	878	Open in IMG/M
3300031910\|Ga0306923_12495162	Not Available	510	Open in IMG/M
3300031912\|Ga0306921_12223445	Not Available	577	Open in IMG/M
3300031941\|Ga0310912_11074069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300031946\|Ga0310910_10672330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	819	Open in IMG/M
3300032008\|Ga0318562_10153160	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300032044\|Ga0318558_10667108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis azurea	520	Open in IMG/M
3300032055\|Ga0318575_10671240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300032064\|Ga0318510_10219666	Not Available	773	Open in IMG/M
3300032065\|Ga0318513_10614905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300032076\|Ga0306924_10692449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1145	Open in IMG/M
3300032160\|Ga0311301_11951874	Not Available	688	Open in IMG/M
3300032261\|Ga0306920_101836240	Not Available	854	Open in IMG/M
3300032893\|Ga0335069_10494964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300032898\|Ga0335072_10072838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4502	Open in IMG/M
3300033134\|Ga0335073_10810694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1002	Open in IMG/M
3300033134\|Ga0335073_11466072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300033134\|Ga0335073_12153239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300033289\|Ga0310914_10429676	Not Available	1195	Open in IMG/M
3300033807\|Ga0314866_052043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300034157\|Ga0370506_018232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frigoribacterium → unclassified Frigoribacterium → Frigoribacterium sp. ACAM 257	1435	Open in IMG/M
3300034197\|Ga0370508_0251137	Not Available	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.09%
Host-Associated	Host-Associated	8.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.18%
Aquatic	Environmental → Aquatic	8.91%
Plants	Host-Associated → Plants	8.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.21%
Freshwater	Environmental → Aquatic → Freshwater	7.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.93%
Peat	Environmental → Terrestrial → Peat	2.97%
Marine	Environmental → Aquatic → Marine	0.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.88%
Loam	Environmental → Terrestrial → Soil → Loam	9.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.99%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300025952	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028450	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300034157	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18	Environmental	Open in IMG/M
3300034197	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02S_18	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102913

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_101075902	3300001546	Forest Soil	MXNVLAPVRDLTDPDQNQAVLDVASVLIEGGLAAERAADGYGPAVAA
JGIcombinedJ26739_1002915994	3300002245	Forest Soil	MRWHPYAMDKTLAPVRDLTDSDQNQAVLDAASALAEGRA
JGIcombinedJ26739_1005171093	3300002245	Forest Soil	MDNVLAPVRDLTDPDQNQAVLDVASVLIEGGLAAERAADGYGPAVAA
JGIcombinedJ26739_1007674182	3300002245	Forest Soil	MDKVLEPARDLTDSDQNQAVLDLASALIEDRAGGPVANRYGPAVAAEAMAAA
JGIcombinedJ26739_1017212382	3300002245	Forest Soil	MDKVLTPARDLTDSAQNQAVLDAASALAEGRAAAADVAASHG
Ga0072322_13333361	3300004973	Peatlands Soil	MDKALVPVRDLTDPDQNQAVLDVASALVEGRPAAGRTAASHGAA
Ga0008090_154261002	3300005363	Tropical Rainforest Soil	MDKALVPARDLTDSDQNQAVLDAASALAEGRAAPGSVVASHGPAV
Ga0070762_107404312	3300005602	Soil	MDKALVSVRDLTDSDQNQAVLDTASALVEARATAGRVADRHGPA
Ga0068856_1001809763	3300005614	Corn Rhizosphere	MDKVLAPARDLTDPDQNQAVLDLATALAEGRATGEEAESRHGPAVAAE
Ga0075276_101082491	3300005898	Rice Paddy Soil	VPVRDLTDPDQNQAVLDVAAAMADGESAAERAAAGHGPAV
Ga0066665_109990151	3300006796	Soil	MDKALAPVRDLTDSDQNQAVLDVASALAGGRAAAGRATAVHGPAVVAEA
Ga0075433_111581591	3300006852	Populus Rhizosphere	MDKALVPVRDLTDSDQNQAVLDVASALAGGRAAAGHAAGSRGPAV
Ga0075426_106261401	3300006903	Populus Rhizosphere	MDKALVPVRDLTDPDQNQAVLDVASVLVEDRVAAERAVASHGPAVAAEA
Ga0105237_125385612	3300009545	Corn Rhizosphere	MDNVLMPVRDLTDSGQNQAVLDAASALAEGRAAADDVEAS
Ga0126384_105256971	3300010046	Tropical Forest Soil	MDKPLVPVRDLTDSDQNQAVLEVASALVQSRAAGRVADSHGPA
Ga0126373_101619381	3300010048	Tropical Forest Soil	MDKALVPVRDLTDPDQNQAVLDAASALFEGRAAAGHVADSHGPAVA
Ga0126376_127465051	3300010359	Tropical Forest Soil	MDKALVPVRDLTDPDQNQAVLDVASALAEDRAAAGSAAGSHGPAV
Ga0126379_107214043	3300010366	Tropical Forest Soil	MDNAVAPARDLTDPEQNQAVLDVASGLAEGRAAAEHVSG
Ga0151490_17518932	3300011107	Soil	MDKALAPVRDLTDSDQNQAVLDVASALAGGRAAAGRAAGSH
Ga0137389_102783793	3300012096	Vadose Zone Soil	MDKALAPVRDLTDSDQNQAVLDVASALAGGRAAAGRVAAIHGPSVAAEA
Ga0164303_103890812	3300012957	Soil	MDKALVPVRDLTDSDQNQAVLDVASALVGGRAAAGRAGSRGPAVAAE
Ga0126369_105001231	3300012971	Tropical Forest Soil	MDKVLMPVRDLTDSDQNQAVLDAASALAEGSATAGGVAASR
Ga0126369_124179012	3300012971	Tropical Forest Soil	MNETLVPVRDLTDSDQNQAVLDVASALAEDRSAAERAAASHGPAVAA
Ga0126369_129362621	3300012971	Tropical Forest Soil	MNKTSMSVRDLTDSDQNQAVLDVASALAEDRSAAERAAASHGPAVAA
Ga0157370_109420691	3300013104	Corn Rhizosphere	MDNVLMPVRDLTDSGQNQAVLDAASALAEGRAAADD
Ga0120109_11245552	3300014052	Permafrost	MNKALVPVRDLTDSDQNQAVLDVASALAEGRAAAGGVADSHGPA
Ga0181523_104517002	3300014165	Bog	MDKTLVPVRDLTDSGQNQAVLDMASALVEGRAAAGRAAG
Ga0181516_100747581	3300014655	Bog	MDKALAPARDLTDSDQNQAVLDLASVLAGGGAAARRA
Ga0157377_109641351	3300014745	Miscanthus Rhizosphere	MDKPLTLVRDLTDSDQNQAVLDLASALLDGRAAADGVAA
Ga0157379_109172372	3300014968	Switchgrass Rhizosphere	MDKALVPVRDLTDPDQNQAVLDVASALAGGRAAAGRAAGSRGPAVA
Ga0182032_104518371	3300016357	Soil	MDKAAVPVRDLTDSDQNQAVLAVASALAGGGAAAVE
Ga0182032_111442481	3300016357	Soil	MNKTSMPARDLTDSDQNQAVLDVAAALAEDRAAAE
Ga0182039_107270732	3300016422	Soil	MDKALVPVRDLTDPDQNQAVLDAASALAEGRAAAERVAD
Ga0182038_101036741	3300016445	Soil	MDKALVPVRDLTDPDQNQAVLDAAAALAEDRATAES
Ga0187812_10042401	3300017821	Freshwater Sediment	MDKVLVPARDLTDSDQNQAVLHLASALAEGRAAAGRAAS
Ga0187820_11323651	3300017924	Freshwater Sediment	MDKVLVPVRDLTDSAQNQAVLDEASALTGNHAAAGRVAGRHGPAVAAEAS
Ga0187806_13877542	3300017928	Freshwater Sediment	MDKVLVPVRDLTDSAQNQAVLDEASALAGSHEATGRVAGS
Ga0187801_100532231	3300017933	Freshwater Sediment	MDKALVPVRDLTDSDQNQAVLDLASALVEGCAAAGRLAASHDPAV
Ga0187783_101778121	3300017970	Tropical Peatland	MDKALVPARDLTDPGQNQEVLDVASTLVEGRAATGRVAASHGPAVAAEAI
Ga0187781_109751911	3300017972	Tropical Peatland	MDKTVAPVRDLTDSDQNQAVLDVASLLIEGGLEPERAADGYGPAVAAEAA
Ga0187777_110213032	3300017974	Tropical Peatland	MDKALVPVRDLTDSDQNQAVLDVASALAGGRAAAERAAAGHGLAV
Ga0187815_101112531	3300018001	Freshwater Sediment	MDKVLVPVRDLTDSDQNQAVLDVASALAEDRVAAGDAAAS
Ga0187855_101535591	3300018038	Peatland	MDKTLVPVRDLTDSGQNQAVLDVASALAEDPAAAARAAGSHG
Ga0206353_113546482	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MDKVLAPARDLTDPDQNQAVLDLASALAEGRATREEAE
Ga0210388_111082882	3300021181	Soil	MDKALVPVRDLTDSDQNQAVLDMASAVVEGRASEGQVAAIHGPAV
Ga0213874_101455842	3300021377	Plant Roots	MDKTLVPVRDLTDSAQNQAVLDVASALAEGRPAAEDIAASHGPAVAAEAIA
Ga0210077_10868432	3300025952	Natural And Restored Wetlands	MDKALVPVRDLTDSDQNQAVLDVACALAEGRVAAERAADSHGS
Ga0257159_10337081	3300026494	Soil	MDKALVPVRDLTDSDQNQAVLDVASALAGGGAAAGRAAGGHGPAVA
Ga0257156_10462731	3300026498	Soil	MDKALVPVRDLTDSDQNQAVLDVASVLAGGRTAAGRIAGSHGPAVAAEAIAA
Ga0208488_10349651	3300027110	Forest Soil	MDNALTPVRDLTDSDQNQAVLDVASVLIEGGSAAERAADGHGPAVAAEA
Ga0209421_10609761	3300027432	Forest Soil	MTKALVPVRDLTDSDQNQAVLDEASALVEGRAAAGSYGPAVAA
Ga0209330_10310901	3300027619	Forest Soil	MDKALAPVRDLTDSDQNQAVLDVASALAEGGTAAGSAAGR
Ga0208827_10220523	3300027641	Peatlands Soil	MDKALVPVRDLTDPDQNQAVLDVASALVEGRAAAGRVAGS
Ga0247684_10432432	3300028138	Soil	MDNVLTPVRDLTDSGQNQAVLDSASALAQGRAAASDVEASHGP
Ga0189898_10015441	3300028450	Peatlands Soil	MDKALVPVRDLTDPDQNQAVLDVASALVEGRAAAGRVAGSHGPAVA
Ga0302266_103090841	3300028779	Bog	MDKALAPVRDLTDSDQNQAVLDVASALVEGRAAAECV
Ga0308309_118137291	3300028906	Soil	MDKALAPVRDLTDSAQNRAVLETASALVEDRATARDVAAGHGVAV
Ga0302190_103163661	3300029988	Bog	MDKALAPVRDLTDSDQNQAVLDVASALVEGRAAAE
Ga0311355_112266711	3300030580	Palsa	MDKALVRVRDLTDSDQNQAVLDLAAALARDPAAAERMAGRH
Ga0318534_102114462	3300031544	Soil	MDKTLVPVRDLTDSDQNQAVIDVAADLVEGRVTVERVAASHGPAVAAE
Ga0318534_107629102	3300031544	Soil	MDKALVPVRDLTDPDQNQAVLDVASALAEDRGAAEHAVDSHGPAV
Ga0318515_107679901	3300031572	Soil	MDKALVPVRDLTDPDQNQAVLDAASALVEGSVAAEHVTDSHGPAVA
Ga0318572_107129041	3300031681	Soil	MRVTVRDLTDPDQNQAVLDAASALVEDRAAAGRVAGSHG
Ga0310686_1197877742	3300031708	Soil	MDKALVPVRDLTDPDQNQAVLDAASALAAGRATAESV
Ga0318496_102492752	3300031713	Soil	MDNPLAPVRDLTDSDQNQAVLDAAAALAGGRAAAGNVAASHGPAV
Ga0307469_114724142	3300031720	Hardwood Forest Soil	MDKVLVPVRDLTDSDQNQAVLDAASALVEDHAAARRV
Ga0318493_107695162	3300031723	Soil	MDKTLVPVRDLTDSDQNQAVIDVAADLVEGRVTVERV
Ga0306918_105613202	3300031744	Soil	MDKTLVPVRDLTDSDQNQAVIDVASALVEGRMTAERVAAS
Ga0318546_113276592	3300031771	Soil	MDKMPVRDLTDSDQNQAVLDLASALVEERAAPGRIAAGYGPAV
Ga0318529_103754192	3300031792	Soil	MDKTLVPVRDLTDSDQNQAVIDVAADLVEGRAPPSR
Ga0307473_114009691	3300031820	Hardwood Forest Soil	MDNVGAMDNVLAPARDLTDSDQNQAVLDMASALAEGRAAAGS
Ga0318564_100629221	3300031831	Soil	MDKALVPVRDLTDPDQNQAVLDAASALVEGSVAAEHVTDSHGPAVAAEAM
Ga0318564_103940381	3300031831	Soil	MNEASVPVRDLTDSEQNQAVLDVASALAEDRAAADRAAAGHGPAVAAE
Ga0318499_100544452	3300031832	Soil	MDKALVPVRDLTDPDQNQAVLDAASALVEGSVAAEHVTDSHGPASWLGRST
Ga0310917_108901651	3300031833	Soil	MNEASVPVRDLTDSEQNQAVLDVASALAEDRAAADRAAAGHGPA
Ga0310917_110811471	3300031833	Soil	MDKALAPVRDLTDSDQNQAVLDTAAALAGGRAAAGNVAASHGP
Ga0318527_104773001	3300031859	Soil	MDKALVPVRDLTDPDQNQAVLDAASALAEGRAAAEQVTDSH
Ga0306919_110821071	3300031879	Soil	MDKALVPVRDLTDPDQNQAVLDAAAALAEDRATAE
Ga0318536_102622251	3300031893	Soil	MDKALAPVRDLTDSDQNQAVLDAASALAAGRAAPESVVASHGPA
Ga0306923_124951621	3300031910	Soil	MDKALAPVRDLTDSAQNQAVLEAASALAEGSAPAEV
Ga0306921_122234452	3300031912	Soil	MDKTLVPVRDLTDSDQNQAVIDVASALVEGRVTAERVAASHGP
Ga0310912_110740691	3300031941	Soil	MDKALVPVRDLTDPDQNQAVLDAAAALAEDRATAESVAASHGPAVT
Ga0310910_106723302	3300031946	Soil	MDKALAPVRDLTDSDQNQAVLDAAAALAGGRAAAGNVA
Ga0318562_101531603	3300032008	Soil	MDKALVPVRDLTDPDQNQAVLDAAAALAGGRATPSAVARPPAR
Ga0318558_106671082	3300032044	Soil	MDKALAPVRDLTDSDQNQAVLDTAAALAGGRAAAGTVAASH
Ga0318575_106712401	3300032055	Soil	MDKALVPVRDLTDPDQNQAVLDAAAALAGGRATAEG
Ga0318510_102196662	3300032064	Soil	MDKTLVPVRDLTDSDQNQAVIDVAADLVEGRVTVERVAASHGPA
Ga0318513_106149051	3300032065	Soil	MDNALVPVRDLTDPDQNQAVLEIASALAEGRAAEPVAD
Ga0306924_106924491	3300032076	Soil	MDKALVPVRDLTDPDQNQAVLDAASALVEGSVAAEHVT
Ga0307415_1005177841	3300032126	Rhizosphere	MGQTPVIMRDLTDPEQNQAVLDAASALAGGGTDAERLAAGLGP
Ga0311301_119518742	3300032160	Peatlands Soil	MDKALVPVRDLTDSDQNQAVLDVASALVEGRAAGRVAGS
Ga0306920_1018362401	3300032261	Soil	VPVRDLTDSEQNQAVLDVASALAEDRAAADRAAAG
Ga0335069_104949643	3300032893	Soil	MDKALAPVRDLTDSDQNQAVLDAASALAEGRAAPGSLVASHGP
Ga0335072_100728381	3300032898	Soil	VRDLTDSDQNQAVLDVASALAQGREAAERAADRQD
Ga0335073_108106942	3300033134	Soil	MDKALAPVRDLTDSDQNQAVLDAASALAEGRAAPG
Ga0335073_114660722	3300033134	Soil	MDKALVPVRDLTDSEQNQAVLDAASALAEGRATAERVAASHGPAVAAE
Ga0335073_121532391	3300033134	Soil	MDNVLTPVRDLTDSDQNQAVLDLASALIKGGLEAERAADG
Ga0310914_104296761	3300033289	Soil	MDKTLVPVRDLTDSDQNQAVIDGASALVEGRVTAERVAAS
Ga0314866_052043_3_128	3300033807	Peatland	MDKLLAPVRDLTDSDQNQAVLDLASALAGGRAAAGRVAASHG
Ga0370506_018232_1_141	3300034157	Untreated Peat Soil	MERITSSARDLTDPDQNQAVLDVASALVTGGTTVELAADGYGPAVAA
Ga0370508_0251137_473_577	3300034197	Untreated Peat Soil	MTPARDLTDPQQNQAVLDLATDLAGGHVSATEAER

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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