Metagenome Family F101697

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101697
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	100 residues
Representative Sequence	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.45 %
% of genes near scaffold ends (potentially truncated)	37.25 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.353 % of family members)
Environment Ontology (ENVO)	Unclassified (36.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.020 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.54% β-sheet: 0.00% Coil/Unstructured: 46.46%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.216.1.1: I/LWEQ domain	d1u89a1	1u89	0.78319
a.213.1.2: DinB-like	d2hkva1	2hkv	0.77868
f.13.1.0: automated matches	d4jq6a_	4jq6	0.77086
a.25.1.9: Rv2844-like	d2ib0a1	2ib0	0.76918
a.29.13.1: Bacillus cereus metalloprotein-like	d3d19a1	3d19	0.76824

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00355	Rieske	44.12
PF08241	Methyltransf_11	9.80
PF01327	Pep_deformylase	6.86
PF13649	Methyltransf_25	3.92
PF07726	AAA_3	0.98
PF01411	tRNA-synt_2c	0.98
PF07973	tRNA_SAD	0.98
PF00271	Helicase_C	0.98
PF04389	Peptidase_M28	0.98
PF00892	EamA	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	6.86
COG0013	Alanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.47 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	71.57 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	71.57 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	64.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6.86 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	64.71 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.94 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	64.71 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	1.96 %
Spirosomaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	0.98 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	64.71 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1.96 %
Flectobacillus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Flectobacillus	0.98 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	64.71 %
Anaeromyxobacter dehalogenans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	0.98 %
Flectobacillus major	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Flectobacillus → Flectobacillus major	0.98 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Unclassified	root	N/A	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100271930	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300002907\|JGI25613J43889_10159847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300002917\|JGI25616J43925_10275293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300005171\|Ga0066677_10012648	All Organisms → cellular organisms → Bacteria	3708	Open in IMG/M
3300005171\|Ga0066677_10219579	All Organisms → cellular organisms → Bacteria → Proteobacteria	1070	Open in IMG/M
3300005174\|Ga0066680_10143553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1490	Open in IMG/M
3300005175\|Ga0066673_10472848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300005177\|Ga0066690_10106865	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300005177\|Ga0066690_10324243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1043	Open in IMG/M
3300005179\|Ga0066684_10797404	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Flectobacillus → Flectobacillus major	625	Open in IMG/M
3300005184\|Ga0066671_10273356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1050	Open in IMG/M
3300005187\|Ga0066675_10540886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	873	Open in IMG/M
3300005447\|Ga0066689_10798028	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300005518\|Ga0070699_100625934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	982	Open in IMG/M
3300005540\|Ga0066697_10040767	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300005540\|Ga0066697_10468153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300005546\|Ga0070696_101424015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300005558\|Ga0066698_11026867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300005559\|Ga0066700_10717694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300005560\|Ga0066670_10287593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	999	Open in IMG/M
3300005561\|Ga0066699_10022749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	3479	Open in IMG/M
3300005561\|Ga0066699_10466463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	903	Open in IMG/M
3300005568\|Ga0066703_10360151	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005568\|Ga0066703_10797606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300005569\|Ga0066705_10656795	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005586\|Ga0066691_10395341	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300005598\|Ga0066706_11502998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300006032\|Ga0066696_10028254	All Organisms → cellular organisms → Bacteria → Proteobacteria	2970	Open in IMG/M
3300006049\|Ga0075417_10039003	All Organisms → cellular organisms → Bacteria → Proteobacteria	2007	Open in IMG/M
3300006173\|Ga0070716_101782914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300006755\|Ga0079222_11700662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300006794\|Ga0066658_10864228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300006797\|Ga0066659_10844012	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	762	Open in IMG/M
3300006800\|Ga0066660_10791529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300006845\|Ga0075421_100781273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1101	Open in IMG/M
3300006852\|Ga0075433_11109158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300006854\|Ga0075425_100455558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1473	Open in IMG/M
3300006854\|Ga0075425_101044328	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006854\|Ga0075425_103033612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300006880\|Ga0075429_101027353	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300006914\|Ga0075436_100268784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	1217	Open in IMG/M
3300006914\|Ga0075436_100796606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300007076\|Ga0075435_100191940	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300007076\|Ga0075435_101117403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
3300007255\|Ga0099791_10418363	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300007265\|Ga0099794_10004749	All Organisms → cellular organisms → Bacteria	5383	Open in IMG/M
3300007265\|Ga0099794_10448371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300007788\|Ga0099795_10240741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300009012\|Ga0066710_100020550	All Organisms → cellular organisms → Bacteria	7289	Open in IMG/M
3300009012\|Ga0066710_100271584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2466	Open in IMG/M
3300009038\|Ga0099829_10000106	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	39408	Open in IMG/M
3300009088\|Ga0099830_10150852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1787	Open in IMG/M
3300009090\|Ga0099827_10000465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	18278	Open in IMG/M
3300009143\|Ga0099792_10897027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300009147\|Ga0114129_10508649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1572	Open in IMG/M
3300010360\|Ga0126372_11998402	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300011270\|Ga0137391_10276176	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1452	Open in IMG/M
3300012096\|Ga0137389_10105874	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300012096\|Ga0137389_10359031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1240	Open in IMG/M
3300012202\|Ga0137363_10993216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300012202\|Ga0137363_11712800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300012203\|Ga0137399_10006595	All Organisms → cellular organisms → Bacteria	6541	Open in IMG/M
3300012205\|Ga0137362_10228556	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300012359\|Ga0137385_11303734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300012683\|Ga0137398_10218628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1261	Open in IMG/M
3300012683\|Ga0137398_10924865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300012917\|Ga0137395_10192233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1417	Open in IMG/M
3300012918\|Ga0137396_10033080	All Organisms → cellular organisms → Bacteria	3438	Open in IMG/M
3300012923\|Ga0137359_10813890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300012925\|Ga0137419_10049496	All Organisms → cellular organisms → Bacteria	2702	Open in IMG/M
3300012929\|Ga0137404_11919058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300015198\|Ga0167625_1112147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300015241\|Ga0137418_10142398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2119	Open in IMG/M
3300015241\|Ga0137418_10830894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300015356\|Ga0134073_10187966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300018433\|Ga0066667_10161645	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300018433\|Ga0066667_10987259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300018468\|Ga0066662_11045212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	812	Open in IMG/M
3300018468\|Ga0066662_12315140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300018482\|Ga0066669_10933474	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300024330\|Ga0137417_1359070	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300025939\|Ga0207665_10217495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1399	Open in IMG/M
3300026309\|Ga0209055_1069828	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300026330\|Ga0209473_1040057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2083	Open in IMG/M
3300026524\|Ga0209690_1008009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5780	Open in IMG/M
3300026548\|Ga0209161_10230030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	991	Open in IMG/M
3300027591\|Ga0209733_1001234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	5605	Open in IMG/M
3300027603\|Ga0209331_1021126	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300027663\|Ga0208990_1164995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300027671\|Ga0209588_1054413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1294	Open in IMG/M
3300027846\|Ga0209180_10000092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	39834	Open in IMG/M
3300027846\|Ga0209180_10025320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3166	Open in IMG/M
3300027882\|Ga0209590_10018182	All Organisms → cellular organisms → Bacteria	3491	Open in IMG/M
3300027903\|Ga0209488_10053075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2986	Open in IMG/M
3300027903\|Ga0209488_10204045	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300027909\|Ga0209382_10474314	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300028536\|Ga0137415_10472171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1061	Open in IMG/M
3300028718\|Ga0307307_10228299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300031820\|Ga0307473_11243044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300032180\|Ga0307471_100846351	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300032205\|Ga0307472_100886605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	824	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.25%
Host-Associated	Host-Associated	12.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.25%
Plants	Host-Associated → Plants	12.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.75%
Loam	Environmental → Terrestrial → Soil → Loam	10.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015198	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2A, Ice surface)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002719302	3300002245	Forest Soil	MRSPGPTTRVERACLARLTEMDAALARMQLELPDDARPLGEEARRKVKVWLSRLGEGGADLGALTSDLEQIGGLMDALTARLLLVPWDGHPTPPGRPS*
JGI25613J43889_101598472	3300002907	Grasslands Soil	MTEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMGDISRMMDALAARLLLVPWDGHPLAGKQKS*
JGI25616J43925_102752932	3300002917	Grasslands Soil	MRSPGPTTRAERACLARLTEMDAALARLQLELPDDAQPLGEEARRKVKVWISRLGEGGADLRSLSSELEEIGGMIDALTARLLLVPWDGHPAAPGRPS*
Ga0066677_100126483	3300005171	Soil	MPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066677_102195792	3300005171	Soil	MTDERSPSPDSARACLARLYEMDAALARMEPELPDDMRPLGAEARRRVHTWLARLGAGDSDLEGLTDAMSEISRMMDALTARLLLVPWDGHPQSGKLKS*
Ga0066680_101435532	3300005174	Soil	MTDERPPRADSARACLARLYEMDAALAKMEPELPDDMRPLGAEARRRVHAWLTRLGAGDSDLGALTDAMTEISRMMDALTARLLLVPWDGHPPNGSLKS*
Ga0066673_104728481	3300005175	Soil	FVVTRIPSGFHPKPPADLLLGVFLGDNQPMPEAPPPDPESTNNCLARLYEMDAALERMEVELPDDVRAVGAEARRRVHDCLHRLGCGADPDLRALTDAVHEISRMMDALTARLLLVPWDGHPRPGPLKS*
Ga0066690_101068653	3300005177	Soil	RLSGENGCMPEAPPPDPDSARACLARLYEMDAALELMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066690_103242431	3300005177	Soil	MPEAPPPDAESNVCLARLYEMDAALERMEVELPEDVRAVGAEARRRVHDCLERLGTGTDPDLRALTEAVHEISRMMDALTARLLLVPWDGHPRTGPLKS*
Ga0066684_107974041	3300005179	Soil	MPEAPPPDPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVRSWLTRLGGGDADLGGLTEAMRDISRMMDALT
Ga0066671_102733562	3300005184	Soil	MPEAPPPDPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLSGLTEAMRDISRMMDALTARLLLVPWDGHPP
Ga0066675_105408862	3300005187	Soil	MPEAPPPDPESRSACLARLQEMDAALERMELELPDDVRAVGAEARRHVHDCLRRLGSGGDPDLRALTEAVREISRMIDALTARLLLVPWDGHPRDDVFKS*
Ga0066689_107980282	3300005447	Soil	MSEAPPPDESSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGGGDVDLGGLTEELQDISRMMDALTARLLLVPWDGRPTRGQPKS*
Ga0070699_1006259341	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GRRRLADRRRRRDLLLSLLSRDKTAMPEVPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGTGDADLTGLTDSMRDISRMMDALTARLLLVPWDGLPTGRQKKS*
Ga0066697_100407673	3300005540	Soil	ACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066697_104681532	3300005540	Soil	MSEAPPPDESSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGGGDVDLGGLTEELQDISRMMDALTARL
Ga0070696_1014240152	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DGGPSAVPRGGRFGNRHCERGLDLLLRALSGENRIMSEAPPPNPESARACLARLYEMDAALERMEVELPDDVRPLGAEARRRVHAWLTRLGAGDPDLEGLTEAMSEISRMMDALTARLLLVPWDGHPPAGKLKS*
Ga0066698_110268672	3300005558	Soil	RFAPERLSGENGCMPEAPPPDPDSARACLARLYEMDTALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066700_107176941	3300005559	Soil	RLSGENGCMPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066670_102875931	3300005560	Soil	MTRIPSGFHQKPPADLLLGVFLGDNQPMPEAPPPDPESTNNCLARLYEMDAALERMEVELPDDVRAVGAEARRRVHDCLHRLGCGADPDLRALTDAVHEISRMMDALTARLLLVPWDGHPRPGPLKS*
Ga0066699_100227491	3300005561	Soil	MPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWD
Ga0066699_104664631	3300005561	Soil	PESLSRDNACMSEAPPPDESSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGGGDVDLGGLTEELQDISRMMDALTARLLLVPWDGRPTRGQPKS*
Ga0066703_103601511	3300005568	Soil	CLARLYEMDAALERMEVELPDDVRAVGAEARRRVHDCLQRLGTGADPDLRALTEAVHEISRMMDALTARLLLVPWDGHPRAGPLKS*
Ga0066703_107976062	3300005568	Soil	PDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066705_106567952	3300005569	Soil	GENGCMPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066691_103953412	3300005586	Soil	MPEAPPPDPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066706_115029982	3300005598	Soil	PSARFAPERLSGENGCMPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066696_100282542	3300006032	Soil	MPPPPSDPESRSACLARLREMDAALAQMERELPEDVRAVGTEARRRVHDCLRRLGSGADNGFESLTAAVEEISRMMDSLTARLLLVPWDGHPKRGPLES*
Ga0075417_100390033	3300006049	Populus Rhizosphere	MPDVPPTDAGTARACLARLYEMDAALERMELELPEDVRSVGAEARRRVHAWLARLGNGDDDLRGLTDAMRDISRMMDALTARLLLVPWDGHPTPGKLKS*
Ga0070716_1017829142	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGTGDADLTGLTDSMRDISRMMDALTARLLLVPWDGLPTGRQKKS*
Ga0079222_117006622	3300006755	Agricultural Soil	MPEAPPPNPDSASACLARLYEMDAALELMEGELPDDVRPVGAEARRRVHDWLTRLGGGDRDLAGLTEAMRDISRMMDALTARLLLVPWDGHAPAANLKS*
Ga0066658_108642281	3300006794	Soil	MTRIPSGFHQKPPADLLLGVFLGDNQPMPEAPPPDPESTNNCLARLYEMDAALERMEVELPDDVRAVGAEARRRVHDCLHRLGCGADPDLRALTDAVHEISRMMDALTA
Ga0066659_108440122	3300006797	Soil	MPEAPPPDPDSARACLARLYEMHTALEQMDVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066660_107915291	3300006800	Soil	MPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALT
Ga0075421_1007812731	3300006845	Populus Rhizosphere	RLDLLLRRLSGENGCMPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGAGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0075433_111091582	3300006852	Populus Rhizosphere	MTEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGAGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0075425_1004555582	3300006854	Populus Rhizosphere	MTQAPPPDPGSARACLARLYEMDAALERMEGELPDDVRPIGAEARRRVRDWLARLGSGDADLGGLTEALRDISRMMDALTARLLLVPWDGRPTRGQPKS*
Ga0075425_1010443282	3300006854	Populus Rhizosphere	MPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGTGDPDLTGLTDSMRDISRMMDALTARLLLVPWDGLPTGRQKKS*
Ga0075425_1030336121	3300006854	Populus Rhizosphere	MPEAPPPDAGSTNACLARLYEMDAALERMEVELPDDVRAVGSEARRRVHDCLERLGTGTDPDLRALTDAVHEISRMMDALTARLLLVPWDGHPRAGPPKS*
Ga0075429_1010273531	3300006880	Populus Rhizosphere	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGAGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAG
Ga0075436_1002687843	3300006914	Populus Rhizosphere	LLLSRLSGDNLGMPEAPPPNPDSASACLARLYEMDAALERMEGELPDDVRPVGAEARRRVHDWLTRLGGGDRDLAGLTEAMRDISRMMDALTARL
Ga0075436_1007966062	3300006914	Populus Rhizosphere	MPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGTGDPDLTGLTDSMRDISRMMDALTARLLLVPWDGLPTGGQKKS*
Ga0075435_1001919401	3300007076	Populus Rhizosphere	CLARLHEMDAALERMELELPEDVRSVGAEARRRVHAWLARLGNGDDDLRGLTDAMRDISRMMDALTARLLLVPWDGHPTPGKLKS*
Ga0075435_1011174031	3300007076	Populus Rhizosphere	PPNPDSASACLARLYEMDAALERMEGELPDDVRPVGAEARRRVHDWLTRLGGGDRDLAGLTEAMRDISRMMDALTARLLLVPWDGHAPAAKLKS*
Ga0099791_104183631	3300007255	Vadose Zone Soil	MTEAPPPDPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDSDLHGLSEAMRDISGIMDALTARLLLVPWDGHSPGGRLKS*
Ga0099794_100047494	3300007265	Vadose Zone Soil	MTEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDSDLHGLSEAMRDISGIMDALTARLLLVPWDGHPPGGRLKS*
Ga0099794_104483711	3300007265	Vadose Zone Soil	PPPDPDSARACLARLYEMDAALEQMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMGDISRMMDALAARLLLVPWDGHPLAGKQKS*
Ga0099795_102407411	3300007788	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0066710_1000205506	3300009012	Grasslands Soil	PPDESSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGGGDVDLGGLTEELQDISRMMDALTARLLLVPWDGRPTRGQPKS
Ga0066710_1002715843	3300009012	Grasslands Soil	MPEAPPPDPESRSACLARLQEMDAALERMELELPDDVRAVGAEARRHVHDCLRRLGSGGDPDLRALTEAVREISRMIDALTARLLLVPWDGHPRDDVFKS
Ga0099829_1000010621	3300009038	Vadose Zone Soil	LLLSLLSRDKGAMPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGAGDPDLTGLTDAMRDISRMMDALTARLLLVPWDGPTGGQQKS*
Ga0099830_101508522	3300009088	Vadose Zone Soil	MTEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLQGLTEAMRDISQIMDALTARLLLVPWDGHPPGGQLKS*
Ga0099827_100004652	3300009090	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLHGLTEAMRDISHIMDALTARLLLVPWDGHPPGGRLKS*
Ga0099792_108970271	3300009143	Vadose Zone Soil	LLLSPVSRDKGCMTEAPPPNSDSARSCLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGGGDADLDGLTEAMSDISRMMDALTARLLLVPWDGHPPGGRLKS*
Ga0114129_105086492	3300009147	Populus Rhizosphere	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGAGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0126372_119984021	3300010360	Tropical Forest Soil	NAFMSEAPPPDPGSARACLARLHEMDAALERMEGELPDDVRPIGAEARRRVREWLARLGCGGADLRGLTEAMGDISRMMDALTARLLLVPWDGRPTRGQPKS*
Ga0137391_102761761	3300011270	Vadose Zone Soil	DLLLRRLSGENRSMTEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLHGLTEAMRDISRMMDALTARLLLVPWDGHPPGGPLKS*
Ga0137389_101058741	3300012096	Vadose Zone Soil	NRSMTEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLHGLTEAMRDISRMMDALTARLLLVPWDGHPPGGPLKS*
Ga0137389_103590312	3300012096	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLHGLTEAMRAISHIMDALTARLLLVPWDGHPPGGQLKS*
Ga0137363_109932162	3300012202	Vadose Zone Soil	MPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGAGDADLTGLTDAMRDISRMMDALTARLLLVPWDGPPTGGQQKS*
Ga0137363_117128001	3300012202	Vadose Zone Soil	MPEAPPPNPESARACLARLYEMDAALERMEIELPDDVRPVGAEARRRVHAWLARLGAGDPDLGGLTEAMRDISRMMDALTARLLLVPWDGHPQSGQLKS*
Ga0137399_100065952	3300012203	Vadose Zone Soil	MTEAPPPNPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLHGLSEAMRDISGIMDALTARLLLVPWDGHPPGGRLKS*
Ga0137362_102285563	3300012205	Vadose Zone Soil	MPEAPPPDEASARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGAGDPDLTGLTDAMRDISRMMDALTARLLLVPWDGPTGGQQKS*
Ga0137385_113037342	3300012359	Vadose Zone Soil	RDLLLRGLSGENRSMPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLHGLTEAMRDISHIMDALTARLLLVPWDGHPPGGRLKS*
Ga0137398_102186282	3300012683	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGNADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0137398_109248652	3300012683	Vadose Zone Soil	RRLSGENRRMTEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMGDISRMMDALAARLLLVPWDGHPLAGKQKS*
Ga0137395_101922333	3300012917	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0137396_100330802	3300012918	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDTALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0137359_108138901	3300012923	Vadose Zone Soil	MTEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMGDISRMMDALAARLL
Ga0137419_100494965	3300012925	Vadose Zone Soil	MTEAPPPDPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS*
Ga0137404_119190582	3300012929	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMRDISRMMDALTARLLLAPWDGPPRTGSKS*
Ga0167625_11121472	3300015198	Glacier Forefield Soil	MANKDRADSERACMSRLQEMDEALAKMEPELPDDVRPLGAEARKRVHGWLQRIALGGADLSQLSEAMRDISGMMDALTARLLLVPWDGHPKRGSLKS*
Ga0137418_101423982	3300015241	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMGDISRMMDALAARLLLVPWDGHPLAGKQKS*
Ga0137418_108308942	3300015241	Vadose Zone Soil	EAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDSDLHGLSEAMRDISGIMDALTARLLLVPWDGHPPGGRLKS*
Ga0134073_101879662	3300015356	Grasslands Soil	MPEAPPPDPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLAPWDGPPPTGPKS*
Ga0066667_101616452	3300018433	Grasslands Soil	MPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTARLLLVPWDGHPPAGKQKS
Ga0066667_109872592	3300018433	Grasslands Soil	MSEAPPPDESSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGGGDVDLGGLTEELQDISRMMDALTARLLLVPWDGRPTRGQPKS
Ga0066662_110452122	3300018468	Grasslands Soil	MTDERPPRADSARACLARLYEMDAALAKMEPELPDDMRPLGAEARRRVHAWLTRLGAGDSDLGALTDAMTEISRMMDALTARLLLVPWDGHPPNGSLKS
Ga0066662_123151402	3300018468	Grasslands Soil	MPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDASRAISRVMDALTARLLLVPWDGHPPAGK
Ga0066669_109334741	3300018482	Grasslands Soil	HGGMPPPPSDPESRSDCLGRLREMDAALAQMERELPEDVRAVGTEARRRVHDCLRRLGSGADNGFESLTAAVEEISRMMDSLTARLLLVPWDGHPKRGPLES
Ga0137417_13590703	3300024330	Vadose Zone Soil	MTEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMGDISRMMDALAARLLLVPWDGHPLAGKQKS
Ga0207665_102174951	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGTGDADLTGLTDSMRDISRMMDALTARLLLVPWDGLPTGRQKKS
Ga0209055_10698282	3300026309	Soil	MTDERSPSPDSARACLARLYEMDAALARMEPELPDDMRPLGAEARRRVHTWLARLGAGDSDLEGLTDAMSEISRMMDALTARLLLVPWDGHPQSGKLKS
Ga0209473_10400572	3300026330	Soil	MPPPPSDPESRSACLARLREMDAALAQMERELPEDVRAVGTEARRRVHDCLRRLGSGADNGFESLTAAVEEISRMMDSLTARLLLVPWDGHPKRGPLES
Ga0209690_10080091	3300026524	Soil	MPEAPPPDPDSARACLARLYEMDAALEQMEVELPDDVRPLGAEARRRVHSWLTRLGGGDADLRGLTDAMRDISRMMDALTAC
Ga0209161_102300301	3300026548	Soil	RRTASPSPWARFAPESLSRDNACMSEAPPPDESSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGGGDVDLGGLTEELQDISRMMDALTARLLLVPWDGRPTRGQPKS
Ga0209733_10012342	3300027591	Forest Soil	MNESEAACLARLTEMDRALELMQAELPDDALPIGDEARAKVRVWLTRLAEGGADLGALSLALAEIGSLMDELTARLLLVPWGGFPKPPSRPS
Ga0209331_10211262	3300027603	Forest Soil	MRSPGPTTRVERACLARLTEMDAALARMQLELPDDARPLGEEARRKVKVWLSRLGEGGADLGALTSDLEQIGGLMDALTARLLLVPWDGHPTPPGRPS
Ga0208990_11649951	3300027663	Forest Soil	LLLGGCGGAPSHTALSGRACLARLYEMDAALEQMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLGGLTEAMGDISRMMDALAARLLLVPWDGHPLAGKQKS
Ga0209588_10544131	3300027671	Vadose Zone Soil	MTEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDSDLHGLSEAMRDISGIMDALTARLLLVPWDGHPPGGRLKS
Ga0209180_1000009221	3300027846	Vadose Zone Soil	MPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGAGDPDLTGLTDAMRDISRMMDALTARLLLVPWDGPTGGQQKS
Ga0209180_100253202	3300027846	Vadose Zone Soil	MTEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLQGLTEAMRDISQIMDALTARLLLVPWDGHPPGGQLKS
Ga0209590_100181823	3300027882	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDADLHGLTEAMRDISHIMDALTARLLLVPWDGHPPGGRLKS
Ga0209488_100530753	3300027903	Vadose Zone Soil	MPEAPPPNPDSARACLARLYEMDAALELMEIELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS
Ga0209488_102040452	3300027903	Vadose Zone Soil	MTEAPPPNSDSARSCLARLYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGGGDADLDGLTEAMSDISRMMDALTARLLLVPWDGHPPGGRLKS
Ga0209382_104743142	3300027909	Populus Rhizosphere	MPEAPPPNPDSARACLARLYEMDAALERMEVELPDDVRPVGAEARRRVHSWLTRLGAGDADLRGLTEAMRDISRMMDALTARLLLVPWDGHPPAGKQKS
Ga0137415_104721712	3300028536	Vadose Zone Soil	LARRYEMDAALERMEVELPDDVRPVGAEARRRVHAWLTRLGAGDSDLHGLSEAMRDISGIMDALTARLLLVPWDGHPPGGRLKS
Ga0307307_102282991	3300028718	Soil	MPEAPPPDPDSARACLARLYEMDAALELMEVELPDDVRPVGAEARRRVHSWLTRLGGGDADLRGLTEAMRDISRMMDALAARLLLVPWDGHPPAGKQKS
Ga0307473_112430441	3300031820	Hardwood Forest Soil	SARACLARLYEMDAALERMEGELPDDVRPVGAEARRRVRAWLARLGTGDADLTGLTDSMRDISRMMDALTARLLLVPWDGLPTGRQKKS
Ga0307471_1008463512	3300032180	Hardwood Forest Soil	MPEAPPPDEGSARACLARLYEMDAALERMEGELPDDVRPVGAEARRRGRAWLARLGTGDADLTGLTDSMRDISRMMDALTARLLLVPWDGLPTGRQKKS
Ga0307471_1026723362	3300032180	Hardwood Forest Soil	LHEMDAALERMEGELPDDVRPIGAEARRRVRDWLARLGSGDTDLGGLTEALGDISRMMDALTARLLLVPWDGRPTRGQPKS
Ga0307472_1008866052	3300032205	Hardwood Forest Soil	MSQAPPPDQGSARACLARLHEMDAALERMEGELPDDVRPIGAEARRRVRDWLARLGSGDTDLGGLTEALGDISRMMDALTARLLLVPWDGRPTRGQPKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101697

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences