Metagenome / Metatranscriptome Family F101544

Basic Information
Family ID	F101544
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	42 residues
Representative Sequence	MSLTPAVAESLRHALATVVVVPVTPLHADGNPDWDTYAALT
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (95.098 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.628 % of family members)
Environment Ontology (ENVO)	Unclassified (18.627 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.09% β-sheet: 2.90% Coil/Unstructured: 71.01%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07729	FCD	67.65
PF00892	EamA	2.94
PF00920	ILVD_EDD	1.96
PF00196	GerE	0.98
PF00795	CN_hydrolase	0.98
PF00701	DHDPS	0.98
PF08281	Sigma70_r4_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	67.65
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	67.65
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	3.92
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.10 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.10 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.10 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	94.12 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.20 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.41 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	9.80 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	6.86 %
Unclassified	root	N/A	4.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	9.80 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	6.86 %
Unclassified	root	N/A	4.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %

Name	Rank	Taxonomy	Distribution
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9.80 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	6.86 %
Unclassified	root	N/A	4.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %

Name	Rank	Taxonomy	Distribution
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9.80 %
Unclassified	root	N/A	4.90 %
Micromonospora kangleipakensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora kangleipakensis	2.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_40570	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300004082\|Ga0062384_100681009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	706	Open in IMG/M
3300005365\|Ga0070688_100447866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	965	Open in IMG/M
3300005467\|Ga0070706_101204284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	696	Open in IMG/M
3300005529\|Ga0070741_10376895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1310	Open in IMG/M
3300005534\|Ga0070735_10008834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	7882	Open in IMG/M
3300005538\|Ga0070731_10504375	Not Available	806	Open in IMG/M
3300005610\|Ga0070763_10936557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300006059\|Ga0075017_100554311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	876	Open in IMG/M
3300006176\|Ga0070765_101279248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	692	Open in IMG/M
3300006176\|Ga0070765_101754318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	583	Open in IMG/M
3300006806\|Ga0079220_10150622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1283	Open in IMG/M
3300006806\|Ga0079220_10188643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1178	Open in IMG/M
3300006806\|Ga0079220_10953282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	674	Open in IMG/M
3300009174\|Ga0105241_10581840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1009	Open in IMG/M
3300009525\|Ga0116220_10294149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300009623\|Ga0116133_1228665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300009624\|Ga0116105_1237938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300010343\|Ga0074044_10698523	Not Available	662	Open in IMG/M
3300010876\|Ga0126361_10724022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2807	Open in IMG/M
3300010880\|Ga0126350_11967254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300012096\|Ga0137389_10190897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1701	Open in IMG/M
3300012198\|Ga0137364_10794107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	715	Open in IMG/M
3300012200\|Ga0137382_10589736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300012349\|Ga0137387_11115482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300012351\|Ga0137386_10076542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2340	Open in IMG/M
3300012357\|Ga0137384_10725523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300012515\|Ga0157338_1005515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1139	Open in IMG/M
3300012924\|Ga0137413_10421921	All Organisms → cellular organisms → Bacteria → Terrabacteria group	964	Open in IMG/M
3300012958\|Ga0164299_11361080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	546	Open in IMG/M
3300012960\|Ga0164301_10430278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300012985\|Ga0164308_10059392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2517	Open in IMG/M
3300012987\|Ga0164307_11714964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300013307\|Ga0157372_10848845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300015242\|Ga0137412_10755199	All Organisms → cellular organisms → Bacteria → Terrabacteria group	718	Open in IMG/M
3300015372\|Ga0132256_103231123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	548	Open in IMG/M
3300015373\|Ga0132257_102665518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300016294\|Ga0182041_10809830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300017930\|Ga0187825_10334156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300017947\|Ga0187785_10601581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300017959\|Ga0187779_10755806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300017972\|Ga0187781_10193678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1433	Open in IMG/M
3300017975\|Ga0187782_10322788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1167	Open in IMG/M
3300018007\|Ga0187805_10370708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300018040\|Ga0187862_10583864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300018085\|Ga0187772_10033737	Not Available	3058	Open in IMG/M
3300020581\|Ga0210399_11191409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	605	Open in IMG/M
3300020582\|Ga0210395_10684431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300021374\|Ga0213881_10596337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300021384\|Ga0213876_10167473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1169	Open in IMG/M
3300021403\|Ga0210397_11233199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300021404\|Ga0210389_10806747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300021404\|Ga0210389_11388658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300021404\|Ga0210389_11413666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300021405\|Ga0210387_11392949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300021407\|Ga0210383_10317363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341	Open in IMG/M
3300024288\|Ga0179589_10170225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300025919\|Ga0207657_11027232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300025928\|Ga0207700_10843133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300025929\|Ga0207664_10481377	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1110	Open in IMG/M
3300026551\|Ga0209648_10835280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300027497\|Ga0208199_1128934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300027812\|Ga0209656_10192481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	994	Open in IMG/M
3300027826\|Ga0209060_10155568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300027895\|Ga0209624_11046585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300028863\|Ga0302218_10229868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300029882\|Ga0311368_10299231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1220	Open in IMG/M
3300029882\|Ga0311368_10551306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300029943\|Ga0311340_10012920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10636	Open in IMG/M
3300029951\|Ga0311371_11152268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	902	Open in IMG/M
3300030399\|Ga0311353_10128381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2438	Open in IMG/M
3300030399\|Ga0311353_11111980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300030490\|Ga0302184_10001720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14054	Open in IMG/M
3300030490\|Ga0302184_10429780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300030503\|Ga0311370_12152509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300030524\|Ga0311357_11168809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300030580\|Ga0311355_10565945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1078	Open in IMG/M
3300031028\|Ga0302180_10054480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2401	Open in IMG/M
3300031236\|Ga0302324_100434756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1942	Open in IMG/M
3300031564\|Ga0318573_10518412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300031715\|Ga0307476_10462401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300031769\|Ga0318526_10065651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1409	Open in IMG/M
3300031769\|Ga0318526_10219852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300031779\|Ga0318566_10383760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	692	Open in IMG/M
3300031782\|Ga0318552_10743929	Not Available	500	Open in IMG/M
3300031832\|Ga0318499_10220134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora kangleipakensis	739	Open in IMG/M
3300031845\|Ga0318511_10468723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300031941\|Ga0310912_10651679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora kangleipakensis	818	Open in IMG/M
3300031964\|Ga0311373_11495779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300032001\|Ga0306922_10668422	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1096	Open in IMG/M
3300032066\|Ga0318514_10584658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300032091\|Ga0318577_10485798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	589	Open in IMG/M
3300032094\|Ga0318540_10265354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300032770\|Ga0335085_11051102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora kangleipakensis	876	Open in IMG/M
3300032783\|Ga0335079_10947017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300032805\|Ga0335078_11114641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	921	Open in IMG/M
3300032828\|Ga0335080_12327612	Not Available	512	Open in IMG/M
3300032895\|Ga0335074_11282154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300032898\|Ga0335072_10793928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300032898\|Ga0335072_11129041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300033545\|Ga0316214_1060422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300034163\|Ga0370515_0110224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1186	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.16%
Host-Associated	Host-Associated	7.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.31%
Aquatic	Environmental → Aquatic	7.84%
Plants	Host-Associated → Plants	7.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.63%
Peat	Environmental → Terrestrial → Peat	14.71%
Freshwater	Environmental → Aquatic → Freshwater	6.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%
Roots	Host-Associated → Plants → Roots	1.96%
Sediment	Environmental → Aquatic → Sediment	0.98%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.73%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.98%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031964	III_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101544

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00341490	2199352025	Soil	MSLAPAAAETLRQALATVVVVPVTPLRPRGNPDWAAYARLTGA
Ga0062384_1006810092	3300004082	Bog Forest Soil	MTLTPDAASTLRRALATAVVVPVTPYLADGNPDWDTYAALTARLID
Ga0070688_1004478662	3300005365	Switchgrass Rhizosphere	MSLTPATAETLRQLLATVVVVPVTPLQADGHPDWAAYAALTRRLIDGGITV
Ga0070706_1012042842	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSLTPAVAETLRQALATVVAVPVTPLHADGNPDWVAYATLTR
Ga0070741_103768951	3300005529	Surface Soil	MSFTPADAENLRQALATVVAVPVTPLQAGGDPDWDTYAALTGRLIDGGITVIT
Ga0070735_100088349	3300005534	Surface Soil	MSLTPDASGSLRRALATAVVVPVTPYLADGNPDWDTYATLTSRLIDA
Ga0070731_105043751	3300005538	Surface Soil	MNLAPDTAQTLRTVLATAVAVPVTPLHADGTPDWD
Ga0070763_109365571	3300005610	Soil	MSLTPAVAEALRHALATVVVVPVTPLYADGNPDWDTY
Ga0075017_1005543111	3300006059	Watersheds	MSLTPAVAESLRHALATVVVVPVTPLHADGNPDWDTYAALT
Ga0070765_1012792481	3300006176	Soil	MTLTPAAAHELRQALGTVVVVPVTPFHADQNPDWDTYGVLTE
Ga0070765_1017543181	3300006176	Soil	MSLTPDAGSTLRRALATAVVVPVTPYLADGNPDWDTY
Ga0079220_101506224	3300006806	Agricultural Soil	MSLAPAVAETLRQALATVVVVPVTPLLADGNPDWAAY
Ga0079220_101886431	3300006806	Agricultural Soil	MSLTPATAETLRQLLATVVVVPVTPLQADGHPDWAAYATLTQRLIDG
Ga0079220_109532821	3300006806	Agricultural Soil	MTFTPAVAQDLRQALATVVAVPVTPFQADGKPDWDTYAAL
Ga0105241_105818402	3300009174	Corn Rhizosphere	MSLTPADVQKLRQALATVVAVPVTPLQADGTPDLDTYGALTRRLVNG
Ga0116220_102941492	3300009525	Peatlands Soil	MSLTPADAQALRHALATVVVVPVTPLSAGGNPDWD
Ga0116133_12286652	3300009623	Peatland	MSLTPATAQALRHALVTAVVVPVTPLHADGSPDWDTYAALTGRLI
Ga0116105_12379382	3300009624	Peatland	MSLTKAEARHLRRALATAVVVPVTPLHADQSADWDTYAALTGRLID
Ga0074044_106985231	3300010343	Bog Forest Soil	MSLTPATAQTLRQALATAVVVPVTPLHADGNPDWDT
Ga0126361_107240223	3300010876	Boreal Forest Soil	MSLTPATAQTLRHALATVVVVPVTPLHADGSPDWDTYAALTGRLIDGGI
Ga0126350_119672542	3300010880	Boreal Forest Soil	MSLTPDAAGTLRHALATVVVVPVTPYQADGNPDWD
Ga0137389_101908972	3300012096	Vadose Zone Soil	MSLTPAAAETLRRALATVVVVPVTPFQAGGNPGWGLA*
Ga0137364_107941073	3300012198	Vadose Zone Soil	MSLTPAAAETLRNALATVVVVPVTPLLADGNPDWVAYTTLTRRLIDG
Ga0137382_105897362	3300012200	Vadose Zone Soil	MSLTPAVAETLRQALATVVVVPVTPLLADGNPDWAAYTTLTRRLIDGGI
Ga0137387_111154822	3300012349	Vadose Zone Soil	MSFTPAVAETLRQALATVVVVPVTPLLADGKPDWAAYARLTRR
Ga0137386_100765424	3300012351	Vadose Zone Soil	MSFTPAVAETLRQALATVVVVPVTPLHADASPDWDTYAALTRRLTDGGITVI
Ga0137384_107255232	3300012357	Vadose Zone Soil	MSLTPAVAETLRQALATVVVVPVTPLLADGNPDWAAYTRLTRRLIDGGITV
Ga0157338_10055152	3300012515	Arabidopsis Rhizosphere	MSLTPAVAETLRQALATVVVVPVTPLLADGNPDWAAYASLTRRLIDGGI
Ga0137413_104219213	3300012924	Vadose Zone Soil	MSLTPAVAETLRQVLATVVVVPVTPLRADGNPDWDAYAALTGRLIGARITVITP
Ga0164299_113610802	3300012958	Soil	MSLTPAVAKTLRQALATVVVVPVTPLLADGNPDWAA
Ga0164301_104302781	3300012960	Soil	MSLTPATAETLRQLLATVVVVPVTPLQADGHPDWAAYAA
Ga0164308_100593924	3300012985	Soil	MTFTPADAQGLRQALATVVAVPVAPFGADGSPDWDAY
Ga0164307_117149642	3300012987	Soil	MSLTPATAETLRQLLATVVVVPVTPLQADGRPDWAAYATLT
Ga0157372_108488451	3300013307	Corn Rhizosphere	MSLTPATAETLRQVLATVVVVPVTPLPADGHPDRDAYAALTRR
Ga0137412_107551992	3300015242	Vadose Zone Soil	MSLTPAVAETLRQVLATVVVVPVTPLRADGHPDWDA
Ga0132256_1032311231	3300015372	Arabidopsis Rhizosphere	MSLTPAVAETLRQALATVVVVPVPPLLADGNPDWAAYASLTRRLIDGGITV
Ga0132257_1026655181	3300015373	Arabidopsis Rhizosphere	MSLTPAVAETLRQALATVVVVPVTPLLADGNPDWAAYAS
Ga0182041_108098301	3300016294	Soil	MSLTPAAAETLRQALATVVVVPVTPLHADGNPDWD
Ga0187825_103341562	3300017930	Freshwater Sediment	MSLTPAAAETLRNVLATVVAVPVTPLHADGNPDWVAYATLTRR
Ga0187785_106015812	3300017947	Tropical Peatland	MSFAPAAAETLRHALATVVAVPVTPLHADGKPDWDTC
Ga0187779_107558062	3300017959	Tropical Peatland	MSFTPAVAETLRHALATVVAVPVTPLRADGNPDWGTYAA
Ga0187781_101936781	3300017972	Tropical Peatland	MSFTPAAAETLRQILATVVAVPVTPLHADGNPDWDT
Ga0187782_103227882	3300017975	Tropical Peatland	MSLTPAAASTLRRALATAVVVPVTPYQADGSPDWDTYAALTGRLIDGGI
Ga0187805_103707082	3300018007	Freshwater Sediment	MSLAPAESQTLRTVLATAVAVPVTPLHADGAPDWDTYARLIGR
Ga0187862_105838642	3300018040	Peatland	MSLTPATAQALRHALVTAVVVPVTPLHADGSPDWDTY
Ga0187772_100337373	3300018085	Tropical Peatland	MSFTPAVAETLRQVLATAVAVPVVPFHAEAGQGLG
Ga0210399_111914091	3300020581	Soil	MSLTPDAASTLRRALATAVVVPVTPYLADGNPDWDAYAALTARLIDAGISVITP
Ga0210395_106844311	3300020582	Soil	MTLTPDAASTLRRALATAVVVPVTPYLADGNPDWDTYGALTARL
Ga0213881_105963371	3300021374	Exposed Rock	MTFTSTTAEALRNALATVVVVPVTPFGEDGGPDLKTYE
Ga0213876_101674733	3300021384	Plant Roots	LTLTPAVAQNLRQALATVVAVPVTPFQADGTPDWDTYPALTR
Ga0210397_112331991	3300021403	Soil	MSLTPAAAETLRNVLATVVAVPVTPLDADGNPDYR
Ga0210389_108067472	3300021404	Soil	MSLTPAVGQTLRHSLATVVVVPVTPLLADGNPDWEAYAGLTRRLIDG
Ga0210389_113886581	3300021404	Soil	MTLTPDAAGSLRRALATAVVVPVTPYLADGNPDWDTY
Ga0210389_114136661	3300021404	Soil	MTLTQAAAQELRQALGTVVVVPVTPLHADQSPDWDTYGALTERLIDGGIR
Ga0210387_113929491	3300021405	Soil	MSLTPAAAETLRHALATVVVVPVTPLLADGNPDWAAYSTLTRR
Ga0210383_103173633	3300021407	Soil	MSLTPAVAEALRHALATVVVVPVTPLHADGNPDWDTYAAL
Ga0179589_101702252	3300024288	Vadose Zone Soil	MSLTPATAETLRQVLATVVVVPVTPLQADGTPDCA
Ga0207657_110272322	3300025919	Corn Rhizosphere	MSLTPATAETLRQVLATVVVVPVTPLQADGHPDGTPT
Ga0207700_108431331	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSLTPAVAETLRQALATVVVVPVTPLLADGNPDWAAYTTLTRRL
Ga0207664_104813771	3300025929	Agricultural Soil	MSLTPAVAKTLRQALATVVVVPVTPLLADGNPDWAAYTTLTRR
Ga0209648_108352802	3300026551	Grasslands Soil	MSLTPAAAETLRRALATAVVVPVTPLQTDGTPDWDTYAAL
Ga0208199_11289341	3300027497	Peatlands Soil	MSLAPDATQELRTVLATAVVVPVTPLHADGSPDWDTYATL
Ga0209656_101924812	3300027812	Bog Forest Soil	MSLTPAEARQLRRVLATAVVVPVTPLYADQSPDWDTYAALTGRLIDGRITVIAPNGNT
Ga0209060_101555681	3300027826	Surface Soil	MSLTPDAASALRHALATAVVVPVTPYLADGNPDWDTYATLTSRLIDAGI
Ga0209624_110465851	3300027895	Forest Soil	MSLSPATAQALRHALVTAVVVPVTPLHADGSPDWDTYATLTG
Ga0302218_102298681	3300028863	Palsa	MSLTPATAQALRHALVTAVVVPVTPLHADGSPDWDTYATLTGR
Ga0311368_102992311	3300029882	Palsa	MSLSPATAQALRHALVTAVVVPVTPLHADGSPDWDTYAALTG
Ga0311368_105513061	3300029882	Palsa	MSLTPAEARQLRRALATAVVVPVTPLHADGSPDWDTYAALTGRLID
Ga0311340_100129201	3300029943	Palsa	MSLTPAEARQLRRALATAVVVPVTPLHADGSPDWDTYAALTGRLIDGGITV
Ga0311371_111522681	3300029951	Palsa	MSLTPAEARQLRRALATAVVVPVTPLHADGSPDWD
Ga0311353_101283811	3300030399	Palsa	MSLTPAEARQLRRALATAVVVPVTPLHADGSPDWDTYAALTGRLIDGG
Ga0311353_111119802	3300030399	Palsa	MSLSPATAQALRHALVTAVVVPVTPLHADGSPDWD
Ga0302184_100017201	3300030490	Palsa	MSLTPAEARQLRRALATAVVVPVTPLHADGSPDWDTYAALTGRLIDGGIT
Ga0302184_104297801	3300030490	Palsa	MSLTPATAQTLRHALATVVVVPVTPLHADASPDWDTYAALTR
Ga0311370_121525092	3300030503	Palsa	MSLTPANAQALRHALVTAVVVPVTPLHADGSPDWDTYATLTGRLIDGGIT
Ga0311357_111688092	3300030524	Palsa	MSLTPATAQTLRHALATVVVVPVTPLHADASPDWDTYA
Ga0311355_105659451	3300030580	Palsa	MSLTPAAAQELRHALVTAVVVPVTPLHADGSPDWDTYATLTGRLIDG
Ga0302180_100544804	3300031028	Palsa	MSLSPATAQALRHALVTAVVVPVTPLHADGSPDWDTYA
Ga0302324_1004347563	3300031236	Palsa	MSLTPAAAQALRHALVTAVVVPVTPLHADGSPDWDTYATLTGR
Ga0318573_105184122	3300031564	Soil	MSLTPAVAQDLKQALATVVVVPVTPLHADGNPDWDAYAALTRRVI
Ga0307476_104624012	3300031715	Hardwood Forest Soil	MSLTPDAASTLRRALATAVVVPVTPYLSDGNPDWDTYAALTAR
Ga0318526_100656513	3300031769	Soil	MSLTPAAAETLRRALATVVVVPVTPFRAGGTPDRDGYTALP
Ga0318526_102198522	3300031769	Soil	MSLTPDAASTLRRAFATAVVVPVTPNQADGNPDSPRGA
Ga0318566_103837601	3300031779	Soil	MSLTPAVAQDLKQALATVVVVPVTPLHADGNPDWDAYAALTRRVIDGGITVI
Ga0318552_107439291	3300031782	Soil	MSLTPAVAQDLKQALATVVVVPVTPLHADGNPDWDAYAALTRRVIDGGIT
Ga0318499_102201342	3300031832	Soil	MSLTPAVAQDLKQALATVVVVPVTPLHADGNPDWDAYAALTRRVIDGGITV
Ga0318511_104687232	3300031845	Soil	MSFTPAVAQTLRQALATVVVVPVTPLRANGRPDWAAYAALT
Ga0310912_106516791	3300031941	Soil	MSLTPAVAQNLKQALATVVVVPVTPLHADGNPDWDAYAALTR
Ga0311373_114957792	3300031964	Palsa	MSLSPATAQALRHALVTAVVVPVTPLHADGSPDWDTY
Ga0306922_106684222	3300032001	Soil	MSLTPAVAQDLKQALATVVVVPVTPLHADGNPDWDAYAALTR
Ga0318514_105846581	3300032066	Soil	MSLTPAVAQDLKQALATVVVVPVTPLHADGNPDWDAYAALTRRVIDGRITVIT
Ga0318577_104857981	3300032091	Soil	MSFTPAVAETLRQALATVVVVPVTPLHADGIPDWEAYAALT
Ga0318540_102653541	3300032094	Soil	MSFTPAVAQTLRQALATVVVVPVTPLRANGSPDWAAYAAL
Ga0335085_110511021	3300032770	Soil	MSFTPAVPETLRQALGTVVVVPVTPLHADGNPDWAAYTALTRRLIDGG
Ga0335079_109470171	3300032783	Soil	MSFTPATAETLRQALATVVVVPVTPLRADGKPDWDAYAALTGR
Ga0335078_111146412	3300032805	Soil	MSLTPDAAGTLRRALATAVVVPVMPYQGDGNPDWDTYALLTSRLIDNGISVIT
Ga0335080_123276122	3300032828	Soil	MSFTSAVAETLRQALGTVVVVPVTPLHADGNPDWA
Ga0335074_112821541	3300032895	Soil	MSFTPADADILRSTLATAVAVSVVPFHADGRPDWDTYATLT
Ga0335072_107939281	3300032898	Soil	MSLTPATAETLRQVLATVVVVPVTPLQADGHPDWD
Ga0335072_111290411	3300032898	Soil	MTFTPATAETLRQVLATVVVVPVTPLQADGQPDWAA
Ga0316214_10604221	3300033545	Roots	MSLTSATAQTLRHALATAVVVPVTPLHADGSPDWD
Ga0370515_0110224_1_129	3300034163	Untreated Peat Soil	MSLTPAEARQLRRALATAVVVPVTPLHADGSPDWDTYAALTGR

Hidden Markov Model


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