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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F101455 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 71 residues |
| Representative Sequence | AEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Number of Associated Samples | 82 |
| Number of Associated Scaffolds | 102 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 100.00 % |
| % of genes from short scaffolds (< 2000 bps) | 96.08 % |
| Associated GOLD sequencing projects | 81 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.84 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (66.667 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (16.667 % of family members) |
| Environment Ontology (ENVO) | Unclassified (30.392 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Unclassified (43.137 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 54.00% β-sheet: 0.00% Coil/Unstructured: 46.00% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.84 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| a.118.8.1: Tetratricopeptide repeat (TPR) | d1nzna1 | 1nzn | 0.78327 |
| a.118.8.1: Tetratricopeptide repeat (TPR) | d1w3ba_ | 1w3b | 0.76994 |
| a.118.8.6: SusD-like | d3ckca_ | 3ckc | 0.76697 |
| a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains | d3txna1 | 3txn | 0.76214 |
| a.118.8.1: Tetratricopeptide repeat (TPR) | d2vyia_ | 2vyi | 0.76034 |
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| Pfam ID | Name | % Frequency in 102 Family Scaffolds |
|---|---|---|
| PF04909 | Amidohydro_2 | 22.55 |
| PF00795 | CN_hydrolase | 8.82 |
| PF16116 | DUF4832 | 3.92 |
| PF01182 | Glucosamine_iso | 2.94 |
| PF01048 | PNP_UDP_1 | 2.94 |
| PF07676 | PD40 | 1.96 |
| PF08279 | HTH_11 | 0.98 |
| PF01996 | F420_ligase | 0.98 |
| PF03109 | ABC1 | 0.98 |
| PF01967 | MoaC | 0.98 |
| PF13525 | YfiO | 0.98 |
| COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
|---|---|---|---|
| COG0363 | 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase | Carbohydrate transport and metabolism [G] | 2.94 |
| COG0775 | Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB | Nucleotide transport and metabolism [F] | 2.94 |
| COG0813 | Purine-nucleoside phosphorylase | Nucleotide transport and metabolism [F] | 2.94 |
| COG2820 | Uridine phosphorylase | Nucleotide transport and metabolism [F] | 2.94 |
| COG0315 | Molybdenum cofactor biosynthesis enzyme MoaC | Coenzyme transport and metabolism [H] | 0.98 |
| COG0661 | Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family | Signal transduction mechanisms [T] | 0.98 |
| COG1478 | F420-0:Gamma-glutamyl ligase (F420 biosynthesis) | Coenzyme transport and metabolism [H] | 0.98 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 66.67 % |
| All Organisms | root | All Organisms | 33.33 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 16.67% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 13.73% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 7.84% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 3.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.92% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 3.92% |
| Wetland | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland | 2.94% |
| Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 2.94% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 2.94% |
| Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 2.94% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Loam → Unclassified → Soil | 2.94% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.96% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 1.96% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.98% |
| Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 0.98% |
| Wetland Sediment | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment | 0.98% |
| Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.98% |
| Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater | 0.98% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.98% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.98% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.98% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.98% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.98% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 0.98% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Wastewater | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater | 0.98% |
| Sediment | Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment | 0.98% |
| Sediment Slurry | Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry | 0.98% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000231 | Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4 | Environmental | Open in IMG/M |
| 3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
| 3300004015 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004782 | Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
| 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
| 3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
| 3300006224 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG | Environmental | Open in IMG/M |
| 3300006605 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300009037 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 | Environmental | Open in IMG/M |
| 3300009075 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 | Environmental | Open in IMG/M |
| 3300009078 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
| 3300009087 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
| 3300009091 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300009111 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 | Environmental | Open in IMG/M |
| 3300009131 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 | Environmental | Open in IMG/M |
| 3300009166 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
| 3300009171 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 | Environmental | Open in IMG/M |
| 3300009868 | Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant | Engineered | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011436 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2 | Environmental | Open in IMG/M |
| 3300012964 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG | Environmental | Open in IMG/M |
| 3300013315 | Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B | Engineered | Open in IMG/M |
| 3300014295 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D1 | Environmental | Open in IMG/M |
| 3300014304 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1 | Environmental | Open in IMG/M |
| 3300014322 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1 | Environmental | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014861 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D | Environmental | Open in IMG/M |
| 3300014885 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D | Environmental | Open in IMG/M |
| 3300015253 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300018077 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1 | Environmental | Open in IMG/M |
| 3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
| 3300021090 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo | Environmental | Open in IMG/M |
| 3300025318 | Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1 | Environmental | Open in IMG/M |
| 3300025324 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300025325 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025326 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025946 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025985 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027743 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027887 | Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk | Environmental | Open in IMG/M |
| 3300027900 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes) | Environmental | Open in IMG/M |
| 3300027979 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300029989 | III_Fen_N1 coassembly | Environmental | Open in IMG/M |
| 3300030339 | III_Bog_N1 coassembly | Environmental | Open in IMG/M |
| 3300030613 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031782 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20 | Environmental | Open in IMG/M |
| 3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
| 3300031834 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0 | Environmental | Open in IMG/M |
| 3300031873 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0 | Environmental | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
| 3300031997 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0 | Environmental | Open in IMG/M |
| 3300032122 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4 | Environmental | Open in IMG/M |
| 3300032143 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0 | Environmental | Open in IMG/M |
| 3300032164 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0 | Environmental | Open in IMG/M |
| 3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
| 3300032516 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0 | Environmental | Open in IMG/M |
| 3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
| 3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
| 3300033406 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT | Environmental | Open in IMG/M |
| 3300033408 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT | Environmental | Open in IMG/M |
| 3300033416 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C | Environmental | Open in IMG/M |
| 3300033418 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A | Environmental | Open in IMG/M |
| 3300033419 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT | Environmental | Open in IMG/M |
| 3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
| 3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
| 3300033482 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C | Environmental | Open in IMG/M |
| 3300033483 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A | Environmental | Open in IMG/M |
| 3300033489 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 | Environmental | Open in IMG/M |
| 3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
| 3300033521 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B | Environmental | Open in IMG/M |
| 3300034077 | Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.3 | Engineered | Open in IMG/M |
| 3300034165 | Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17 | Environmental | Open in IMG/M |
| 3300034177 | Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| TB_LI09_4DRAFT_101775311 | 3300000231 | Groundwater | AGRDFRQTALAHRAAQRLGEASDAEWRPRLEAALGEADTYLFRGGHYPAVATAARGMLLRALGRVAEGAAALREVIVLPDRALAHHIARRALQEP* |
| JGIcombinedJ13530_1070551651 | 3300001213 | Wetland | ADLYLFRGGHYPAVATGARGLLLRALGRTREGDEALRQVFVLPDKGMAHHVARLALHPGP |
| JGIcombinedJ13530_1071912992 | 3300001213 | Wetland | AGDAQWRPRLEAALVEAELYLFRGGHYPAGATLARGMLLRALGRVAEGNEALRQVFVLPDKGMPHHIARVALQEP* |
| Ga0055462_103278792 | 3300004015 | Natural And Restored Wetlands | EWPRRLETALGEADLYLFRGGHYPAVATCARGMLLRALGRKAEGEAALRQVFVLPDKGMPHHIARRALGER* |
| Ga0062590_1005578622 | 3300004157 | Soil | DLRQAAFAYRAAQRLGEATDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGMLLRALGKAAEGDEALRQVFTLPDKGMPHHMARLALEER* |
| Ga0062382_100223451 | 3300004782 | Wetland Sediment | SEAEWRPRLEAALAEADLYLFRGGHYPAGATCARGMLLRSLGRAPEGDEALRQVFVLPDQGLPHHIARLALQEP* |
| Ga0066388_1024719792 | 3300005332 | Tropical Forest Soil | FRGGHYPALATAARGLALRALGRATEGEAALRQVFTLPDKGMAHEIARLALQEPEAAARP |
| Ga0070692_109631212 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | RDLRQAAFAYRAAQRLGEATDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGMLLRALGKTAEGDEALRQVFTLPDKGMPHHMARLALEER* |
| Ga0068854_1005508031 | 3300005578 | Corn Rhizosphere | AEADLYLFRGGHYPALATAARGLLLRALGRTREGDEALRQVFLLPDKGMPHHIARLALEDAQGVSRSRSTLTR* |
| Ga0075422_102660152 | 3300006196 | Populus Rhizosphere | LGAANEAEWRPRLEAALAEADLYLFRGGHYPAVATAARGLILRALRRGREGDEALRQVFLLPDKGMPHHIARLALAGGRMEE* |
| Ga0079037_1002855931 | 3300006224 | Freshwater Wetlands | PAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLEP* |
| Ga0079037_1024483561 | 3300006224 | Freshwater Wetlands | ALDEADTYLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP* |
| Ga0074057_102309801 | 3300006605 | Soil | AEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEER* |
| Ga0075428_1004101481 | 3300006844 | Populus Rhizosphere | EADLYLFRGGHYPAVATCARGMLLRALGRTSEGNETLRQVFVLPDKGMPHHIARLALQEQ |
| Ga0075428_1014499701 | 3300006844 | Populus Rhizosphere | ALAEADLYLFRGGHYPAVATAARGLILRALRRGREGDEALRQVFLLPDKGMPHHIARLALSGGRMEE* |
| Ga0075433_117457211 | 3300006852 | Populus Rhizosphere | AEADLYLFRGGHYPAVATAARGLLLRALGRGREGDEALRHVFLLPDKGMPHHIARLALAGGRMEE* |
| Ga0105093_105987801 | 3300009037 | Freshwater Sediment | DTYLFRGGHYPALATAARGMLLRVLGRAAEGDAALREVIVLPDRALAHHIARLALQEP* |
| Ga0105090_104513232 | 3300009075 | Freshwater Sediment | EADLYLFRGGHYPAGATAARGMLLRALGRGPEGEQALRQVFVLPDKGLAHHIARLAL* |
| Ga0105106_104091022 | 3300009078 | Freshwater Sediment | AVATCARGMLLRALGRSPEGDEALRRVFVLPDKGMPHHIARLALEEAVEGGTP* |
| Ga0105107_109435762 | 3300009087 | Freshwater Sediment | HRAALRLGEATDAEWRPRLESALAEADLYLFRGGHYPAVATCARGMLLSALGRRSDGDEVLRRVFVLPDKGMPHHMARLGLEEPL* |
| Ga0102851_125229711 | 3300009091 | Freshwater Wetlands | QKLGEASEVEWRPRLETALAEAETYLFRGGHYPAVATCARGLLLRALGRTREGEEALRQVFVLPDKGMPHHIARLALQEP* |
| Ga0115026_103825721 | 3300009111 | Wetland | RSAQKLGEASEAEWRPRLETALAEAETYLFRGGHYPAVATCARGLLLRALGRTREGEEALRQVFVLPDKGMPHHIARLALQEP* |
| Ga0115026_111756141 | 3300009111 | Wetland | RLQAALEEADTYLFRGGHYPALATCSRGMLLRALGRGPEGDEALRQVFVLPDKGLPHHIARLALQEP* |
| Ga0115027_108681601 | 3300009131 | Wetland | PRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLEP* |
| Ga0105100_107620482 | 3300009166 | Freshwater Sediment | DLYLFRGGHYPAVATCARGMLLRALGRSPEGDEALRRVFVLPDKGMPHHIARLALEEAVEGGTP* |
| Ga0105101_105554512 | 3300009171 | Freshwater Sediment | QKLGTANEAEWRPRLETALAEADLYLFRGGHYPAVATCARGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP* |
| Ga0130016_103107852 | 3300009868 | Wastewater | RQSAFAYRAAQRLGEASDAEWRPRLQAALDEADTYLFRGGHYPALATAARGMLLRALGRVAEGDAALREVIVLPDRALAHHIARLALEGR* |
| Ga0134121_130031582 | 3300010401 | Terrestrial Soil | DHAEWRPRLEAALAEADLYLFRGGHYPALATAARGLLLRALGRTGEGDEALRQVFLLPDKGMPHHIARLGLEEAQGVSRSRSTPTR* |
| Ga0137458_11336912 | 3300011436 | Soil | AFAYRAAQRLGEASEPAWRPRLETALAEADLYLFRGGHYPAGATCARGMLLRALGRIPEGDEALRQAFVLPDKGMPHHIARLALQEP* |
| Ga0153916_130949962 | 3300012964 | Freshwater Wetlands | AAQKLGQAGESEWRPRLEAALVEADLYLFRGGHYPAVATCARGMLLRALGRTSESDEALRQAFVLPDKGMPHHIARLALENR* |
| Ga0173609_105592082 | 3300013315 | Sediment | LYLFRGGHYPAGATGARGMLLRALGRGPEGEDALRQVFVLPDKGLPHHIARLALQEP* |
| Ga0075305_10709442 | 3300014295 | Natural And Restored Wetlands | ERLGQATDPEWSRRLETALGEADLYLFRGGHYPAVATCARGMLLRALGRKAEGEAALRQVFVLPDKGMPHHIARLALGER* |
| Ga0075340_11558561 | 3300014304 | Natural And Restored Wetlands | TDAEWPRRLETALAEANLYLFRGGHYPAVATCARGMLLRALGRIAEGEAALRQVFVLPDKGMPHHIARLALGER* |
| Ga0075355_12309802 | 3300014322 | Natural And Restored Wetlands | AQWRPRLETALGEADLYLFRGGHYPAGATCARGMLLRALGRVPEGNEALRQVFVLPDKGMPHHVARLALEEPHGGGEPRPRGDAPGGE* |
| Ga0157380_129681292 | 3300014326 | Switchgrass Rhizosphere | EWRPRLEAALAEADLYLFRGGHYPALATAARGLLLRALGRTREGDEALRQVFLLPDKGMPHHIARLELEDAQGVSRSRSTPTR* |
| Ga0180061_10521762 | 3300014861 | Soil | AAQKLGTANEAEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP* |
| Ga0180063_12926812 | 3300014885 | Soil | WRPRLETALAEADLYLFRGGHYPAVATCARGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP* |
| Ga0180081_10480011 | 3300015253 | Soil | AEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP* |
| Ga0132258_103782305 | 3300015371 | Arabidopsis Rhizosphere | GEASDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDKALRQVFTLPDKGMPHHMARLALEER* |
| Ga0132256_1035244401 | 3300015372 | Arabidopsis Rhizosphere | EASDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDKALRQVFTLPDKGMPHHMARLALEER* |
| Ga0184633_104606702 | 3300018077 | Groundwater Sediment | PRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRTKEGDEALRQVFVLPDKGLPHHIARLALQEPQ |
| Ga0184628_105207912 | 3300018083 | Groundwater Sediment | AQRLGDASESEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEER |
| Ga0210377_104145891 | 3300021090 | Groundwater Sediment | ETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPESDEALRQVFVLPDKGLPHHVARLALQEQ |
| Ga0209519_107711242 | 3300025318 | Soil | YLFRGGHYPAVATCARGMLLRALGRTAEGDEALRQVFVLPDKGMPHHIARIALQEPQ |
| Ga0209640_101919703 | 3300025324 | Soil | YRAAQRLGEASDPTWRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRTAEGDEALRQVFVLPDKGMPHHIARIALQEPQ |
| Ga0209341_112810842 | 3300025325 | Soil | PAWRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRTAEGDEALRQVFVLPDKGMPHHIARIALQEPQ |
| Ga0209342_107378332 | 3300025326 | Soil | ETALAEADLYLFRGGHYPAVATCARGMLLRALGRTAEGDLALRQVFVLPDKGMPHHIARIALQEPQ |
| Ga0210126_1138421 | 3300025946 | Natural And Restored Wetlands | LFRGGHYPAVATCARGMLLRALGRNAEAEAALRQVFVLPDKGMPHHIARLALQQP |
| Ga0210117_10077401 | 3300025985 | Natural And Restored Wetlands | DTYLFRGGHYPGVATCARGMLLRALGRTSEGDLALRSVFTLPDKGMPHHVARLALHELLEAAPAP |
| Ga0209593_102437742 | 3300027743 | Freshwater Sediment | AYRAAQRLGEATDAAWRPRLEAALAEADLYLFRGGHYPAVATNARGLLLRALGRVREGEDALRQVFVLPDKGMPHHMARLALQER |
| Ga0208980_101970493 | 3300027887 | Wetland | RSAQRLGEASDAEWQPRLQAALDEADTYLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0209253_100820824 | 3300027900 | Freshwater Lake Sediment | RGGHYPAGATCARGMLLRALGRIPESDEALRQVFILPDKGMPHHIARLALQEP |
| Ga0209705_103409531 | 3300027979 | Freshwater Sediment | RLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRSPEGDEALRRVFVLPDKGMPHHIARLALEEAVEGGTP |
| Ga0311365_108395961 | 3300029989 | Fen | YLFRGGHYPAGATCARGMLLRALGRTREGDEALRQVFVLPDKGMPHHIARLALAEADKTP |
| Ga0311360_115017192 | 3300030339 | Bog | LFRGGHYPAGATCARGMLLRALGRTREGDEALRQVFVLPDKGMPHHIARLALAEADKTP |
| Ga0299915_107892111 | 3300030613 | Soil | GEASDAEWRPRLGSALAEAELYLFRGGHYPAIAMCARGMLLRALGRRSEGDEVLRRVFVLPDKGMPHHMARLGLEEPL |
| Ga0307468_1018835502 | 3300031740 | Hardwood Forest Soil | AEWRPRLQAALAEADTYLFRGGHYPALATLGRGMLLRALGKTAEADESLRQVFTLPDKGMPHHMARLALEER |
| Ga0318552_102031063 | 3300031782 | Soil | YLFRGGHYPGLATCSRGLLLRALGRTAEADEALRQVFTLPDKGLPHHMARLALQEP |
| Ga0318497_106936882 | 3300031805 | Soil | ADTYLFRGGHYPGLATCSRGLLLRALGRTAEADEALRQVFTLPDKGLPHHMARLALQEP |
| Ga0315290_105114291 | 3300031834 | Sediment | ETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0315297_105897692 | 3300031873 | Sediment | AAKGRDFRQAAFAYRAAQRLGEANDADWRPRLEAALAEADLYLFRGGHYPAGATCARGMLLRALGRTAEADEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0315297_110313712 | 3300031873 | Sediment | PRLETALAEADTYLFRGGHYPAVATSARGMLLRALGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP |
| Ga0315297_114747811 | 3300031873 | Sediment | AGHDFRQTAFAYRAAQRLGEASEAEWRPRLETALAEADTYLFRGGHYPAVATSARGMLLRALGRVPEGNESLRQVFVLPDKGLPHHIARLALQEP |
| Ga0310900_115966671 | 3300031908 | Soil | EAALAEADLYLFRGGHYPALATAARGLLLRALGRAQEGDEALRQVFLLPDKGMPHHIARLALEEAQGVSRSRSTPTR |
| Ga0310885_102462682 | 3300031943 | Soil | ALAEADTYLFRGGHYPALATLGRGMLLRALGKTAEGGESLRQVFTLPDKGMPHHMARLALEER |
| Ga0315278_119108841 | 3300031997 | Sediment | RPRLETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0315278_119346461 | 3300031997 | Sediment | QKLGEADDGAWRPRLEAALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP |
| Ga0310895_104957971 | 3300032122 | Soil | DAEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEER |
| Ga0310895_107732662 | 3300032122 | Soil | QAAFAYRAAQRLGEASDAEWRPRLEAALAEAETYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEEH |
| Ga0315292_105901022 | 3300032143 | Sediment | EASEAEWRPRLETALAEADLYLFRGGHYPAGATCARGMLLRALGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP |
| Ga0315292_106002712 | 3300032143 | Sediment | LAEADTYLFRGGHYPAVATSARGMLLRALGRIPEGDLALRQVFVLPDKGMPHHIARLALQEP |
| Ga0315292_109946111 | 3300032143 | Sediment | RPRLETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP |
| Ga0315292_115648381 | 3300032143 | Sediment | ADTYLFRGGHYPAVATSARGMLLRALGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP |
| Ga0315283_114962901 | 3300032164 | Sediment | LETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0315283_122913832 | 3300032164 | Sediment | LAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP |
| Ga0310812_105394662 | 3300032421 | Soil | AFAYRAAQRLGEATDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGMLLRALGKAAEGDEALRQVFTLPDKGMPHHMARLALEER |
| Ga0315273_108886362 | 3300032516 | Sediment | LYLFRGGHYPAGATCARGMLLRSLGRVSEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0315273_126450272 | 3300032516 | Sediment | GHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP |
| Ga0335085_121860821 | 3300032770 | Soil | DANEAVWRPRLEAALAEADTYLFRGGHYPGLATCSRGLLLRALGRAAEADEALRQVFTLPDKGLPHHMARLALQER |
| Ga0335084_110363171 | 3300033004 | Soil | GGHCPALATCARGMLLRALGRTSEADEALRHVFLLPDKGMPHHMARLALDTR |
| Ga0316604_102058471 | 3300033406 | Soil | HAALDEADTYLFRGGHYPALGTAARGMLLRALGRAAEGDAALREVIVLPDRALAHHIARLALEGR |
| Ga0316605_105563092 | 3300033408 | Soil | DFRQAAFAYRSAQRLGEASDAEWRPRLHAALDEADTYLFRGGHYPALGTAARGMLLRALGRAAEGDAALREVIVLPDRALAHHIARLALEGR |
| Ga0316605_114748591 | 3300033408 | Soil | AEADLYLFRGGHYPAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLE |
| Ga0316622_1014242262 | 3300033416 | Soil | PRLEAALAEAETYLFRGGHYPAVATCARGLLLRAVGRTHEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0316622_1017307392 | 3300033416 | Soil | FAYRSAQRLGGASDAEWRPRLQAALDEADTYLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0316622_1021663432 | 3300033416 | Soil | RGGHYPAVATCARGMLLRALGRVPEGDESLRQVFVLPDKGLPHHIARLALQEQ |
| Ga0316625_1015581581 | 3300033418 | Soil | GRLETALAEADLYLFRGGHYPAVATCARGLLLRALGRTSEGDEALRQVFTLPDKGMPHHIARLALQEQ |
| Ga0316601_1016018502 | 3300033419 | Soil | QRLGEASDAEWRPRLHAALDEADTYLFRGGHYPALGTAARGMLLRALGRAAEGDAALREVIVLPDRALAHHIARLALEGR |
| Ga0316601_1017556502 | 3300033419 | Soil | EAGDAQWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLEP |
| Ga0326726_113259752 | 3300033433 | Peat Soil | FRGGHYPAVATCARGMLLRALGRAHEGDLALRQVFVLPDKAMPHHIARLALQEHEKE |
| Ga0316620_109294412 | 3300033480 | Soil | ALAEADLYLFRGGHYPALATCARGMLLRALGRVPEGDDALRQVFVLPDKGMPHHMARLALTEQ |
| Ga0316627_1007381613 | 3300033482 | Soil | YRAAQRLGEASEAEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGLPHHIARLALQEPWK |
| Ga0316627_1014794831 | 3300033482 | Soil | YLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0316629_110628172 | 3300033483 | Soil | ALEEADTYLFRGGHYPAVATCARGLLLRALGRTSEGDEALRQVFTLPDKGMPHQIARLARMEP |
| Ga0299912_101322791 | 3300033489 | Soil | EADTYLFRGGHYPAVATGARGMLLRALGRAPEGDEALRQVFVLPDRALAHHVARLALQEPSKRGMP |
| Ga0299912_101803763 | 3300033489 | Soil | AYRSAQRLGEASDAEWQPRLRAALDEAETYLFRGGHYPALATCSRGMLLRALRRVPEGDEALRQVFVLPDKGMPHHIARLALEER |
| Ga0299912_103505113 | 3300033489 | Soil | RPRLESALAEAELYLFRGGHYPAIAMCARGMLLRALGRRSEGDEVLRRVFVLPDKGMPHHMARLGLEEPL |
| Ga0316628_1005442932 | 3300033513 | Soil | DFRQAAFAYRAAQRLGEAGDAEWRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRVSEGDEALRQVFVLPDKGMPHHMARRALHEP |
| Ga0316616_1013968741 | 3300033521 | Soil | EADLYLFRGGHYPAGATCARGMLLRALGRGPEGEEALRQVFVLPDKGMPHHIARLALQEP |
| Ga0373899_009296_2_238 | 3300034077 | Sediment Slurry | LGQASEAEWRPRLEAALAEADLYLFRGGHYPAGATAARGMLLRALGRGPEGEEALRQAFVLPDKGLAHHIARLALQEP |
| Ga0364942_0187129_497_676 | 3300034165 | Sediment | DLYLFRGGHYPAVATCARGMLLRALGRNADGDEALRQVFVLPDKGMPHHIARIALQEPQ |
| Ga0364932_0053469_1306_1521 | 3300034177 | Sediment | WRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRIAEGDDALRQVFVLPDKGMPHHIARIALQEPQ |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |