Metagenome / Metatranscriptome Family F101444

Basic Information
Family ID	F101444
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	81 residues
Representative Sequence	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Number of Associated Samples	57
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.12 %
% of genes near scaffold ends (potentially truncated)	22.55 %
% of genes from short scaffolds (< 2000 bps)	77.45 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (65.686 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.255 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.17% β-sheet: 0.00% Coil/Unstructured: 57.83%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01192	RNA_pol_Rpb6	36.27
PF00011	HSP20	18.63
PF01425	Amidase	12.75
PF01875	Memo	1.96
PF00180	Iso_dh	1.96
PF02265	S1-P1_nuclease	0.98
PF03806	ABG_transport	0.98
PF01871	AMMECR1	0.98
PF01098	FTSW_RODA_SPOVE	0.98
PF00330	Aconitase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	36.27
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	18.63
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	12.75
COG1355	Predicted class III extradiol dioxygenase, MEMO1 family	General function prediction only [R]	1.96
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	0.98
COG1288	Predicted membrane transporter YfcC, affects glyoxylate shunt	General function prediction only [R]	0.98
COG2078	Predicted RNA modification protein, AMMECR1 domain	General function prediction only [R]	0.98
COG2978	p-Aminobenzoyl-glutamate transporter AbgT	Coenzyme transport and metabolism [H]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
All Organisms	root	All Organisms	34.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
cellular organisms	root	All Organisms → cellular organisms	34.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.94 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.94 %
Geothrix fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_106129434	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300001213\|JGIcombinedJ13530_108826466	Not Available	935	Open in IMG/M
3300003471\|FeGluNO3_10027020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300003858\|Ga0031656_10005518	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5224	Open in IMG/M
3300003858\|Ga0031656_10070480	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300003858\|Ga0031656_10080156	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300003858\|Ga0031656_10080449	Not Available	1219	Open in IMG/M
3300004048\|Ga0055494_10165393	Not Available	517	Open in IMG/M
3300004481\|Ga0069718_13881149	Not Available	857	Open in IMG/M
3300004778\|Ga0062383_10256300	Not Available	826	Open in IMG/M
3300006224\|Ga0079037_100006896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	7037	Open in IMG/M
3300006224\|Ga0079037_100023107	All Organisms → cellular organisms → Bacteria	4431	Open in IMG/M
3300006224\|Ga0079037_100041440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3517	Open in IMG/M
3300006224\|Ga0079037_100461459	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300006224\|Ga0079037_100557449	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006224\|Ga0079037_100962975	Not Available	843	Open in IMG/M
3300006224\|Ga0079037_101084565	Not Available	794	Open in IMG/M
3300006224\|Ga0079037_101643678	Not Available	642	Open in IMG/M
3300006224\|Ga0079037_101997616	Not Available	579	Open in IMG/M
3300006224\|Ga0079037_102617717	Not Available	502	Open in IMG/M
3300009009\|Ga0105105_10084915	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300009009\|Ga0105105_10425876	Not Available	745	Open in IMG/M
3300009037\|Ga0105093_10010263	All Organisms → cellular organisms → Bacteria	3779	Open in IMG/M
3300009075\|Ga0105090_10013788	All Organisms → cellular organisms → Bacteria	4871	Open in IMG/M
3300009091\|Ga0102851_10170496	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300009091\|Ga0102851_10863246	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300009111\|Ga0115026_10009528	All Organisms → cellular organisms → Bacteria	4215	Open in IMG/M
3300009131\|Ga0115027_10939122	Not Available	672	Open in IMG/M
3300009165\|Ga0105102_10556821	Not Available	629	Open in IMG/M
3300009167\|Ga0113563_10003862	All Organisms → cellular organisms → Bacteria	9470	Open in IMG/M
3300009167\|Ga0113563_10695784	Not Available	1139	Open in IMG/M
3300009167\|Ga0113563_10894744	Not Available	1013	Open in IMG/M
3300009167\|Ga0113563_11925143	Not Available	705	Open in IMG/M
3300009167\|Ga0113563_11956302	Not Available	700	Open in IMG/M
3300009179\|Ga0115028_10507332	Not Available	878	Open in IMG/M
3300009430\|Ga0114938_1143726	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300009455\|Ga0114939_10109592	Not Available	1170	Open in IMG/M
3300009587\|Ga0115602_1008360	Not Available	851	Open in IMG/M
3300009688\|Ga0116176_10003518	All Organisms → cellular organisms → Bacteria	11577	Open in IMG/M
3300009715\|Ga0116160_1073479	Not Available	1550	Open in IMG/M
3300013315\|Ga0173609_10534835	Not Available	579	Open in IMG/M
3300019252\|Ga0172286_1009861	Not Available	804	Open in IMG/M
3300025677\|Ga0209719_1071216	Not Available	1140	Open in IMG/M
3300025772\|Ga0208939_1000204	All Organisms → cellular organisms → Bacteria → Acidobacteria	52099	Open in IMG/M
3300027683\|Ga0209392_1023624	Not Available	1971	Open in IMG/M
3300027715\|Ga0208665_10218557	Not Available	600	Open in IMG/M
3300027715\|Ga0208665_10262057	Not Available	543	Open in IMG/M
3300027726\|Ga0209285_10028927	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300027739\|Ga0209575_10046085	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300027762\|Ga0209288_10035216	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300027843\|Ga0209798_10208931	Not Available	960	Open in IMG/M
3300027871\|Ga0209397_10001525	All Organisms → cellular organisms → Bacteria → Acidobacteria	4142	Open in IMG/M
3300027871\|Ga0209397_10322866	Not Available	742	Open in IMG/M
3300027871\|Ga0209397_10717476	Not Available	502	Open in IMG/M
3300027877\|Ga0209293_10040804	Not Available	1843	Open in IMG/M
3300027885\|Ga0209450_10006232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	6176	Open in IMG/M
3300027887\|Ga0208980_10018119	All Organisms → cellular organisms → Bacteria → Acidobacteria	4103	Open in IMG/M
3300027890\|Ga0209496_10436617	Not Available	685	Open in IMG/M
3300027890\|Ga0209496_10682624	Not Available	561	Open in IMG/M
3300027897\|Ga0209254_10000359	All Organisms → cellular organisms → Bacteria → Acidobacteria	35641	Open in IMG/M
3300027897\|Ga0209254_10523964	Not Available	852	Open in IMG/M
3300027897\|Ga0209254_10523965	Not Available	852	Open in IMG/M
3300027899\|Ga0209668_10051144	Not Available	2226	Open in IMG/M
3300027899\|Ga0209668_10528363	Not Available	784	Open in IMG/M
3300027900\|Ga0209253_10895863	Not Available	622	Open in IMG/M
3300032143\|Ga0315292_10441188	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300032143\|Ga0315292_11028024	Not Available	683	Open in IMG/M
3300032143\|Ga0315292_11570528	Not Available	531	Open in IMG/M
3300032164\|Ga0315283_10885677	Not Available	951	Open in IMG/M
3300032177\|Ga0315276_10887650	Not Available	952	Open in IMG/M
3300033406\|Ga0316604_10049768	Not Available	2154	Open in IMG/M
3300033408\|Ga0316605_10147605	Not Available	1906	Open in IMG/M
3300033408\|Ga0316605_10309329	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300033408\|Ga0316605_10925360	Not Available	834	Open in IMG/M
3300033408\|Ga0316605_11989891	Not Available	565	Open in IMG/M
3300033408\|Ga0316605_12161270	Not Available	541	Open in IMG/M
3300033408\|Ga0316605_12402463	Not Available	512	Open in IMG/M
3300033413\|Ga0316603_10017232	All Organisms → cellular organisms → Bacteria → Acidobacteria	4657	Open in IMG/M
3300033413\|Ga0316603_10092209	Not Available	2366	Open in IMG/M
3300033413\|Ga0316603_10097548	Not Available	2311	Open in IMG/M
3300033413\|Ga0316603_10198207	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300033416\|Ga0316622_100014977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6429	Open in IMG/M
3300033416\|Ga0316622_100152597	Not Available	2409	Open in IMG/M
3300033416\|Ga0316622_100308079	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300033416\|Ga0316622_102513921	Not Available	593	Open in IMG/M
3300033418\|Ga0316625_101795324	Not Available	595	Open in IMG/M
3300033419\|Ga0316601_100274977	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300033419\|Ga0316601_100485588	Not Available	1182	Open in IMG/M
3300033419\|Ga0316601_100515527	Not Available	1149	Open in IMG/M
3300033419\|Ga0316601_101038981	Not Available	819	Open in IMG/M
3300033433\|Ga0326726_10674445	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300033481\|Ga0316600_10790382	Not Available	669	Open in IMG/M
3300033483\|Ga0316629_10344488	Not Available	1027	Open in IMG/M
3300033483\|Ga0316629_10396271	Not Available	971	Open in IMG/M
3300033485\|Ga0316626_11748965	Not Available	562	Open in IMG/M
3300033488\|Ga0316621_10662881	Not Available	750	Open in IMG/M
3300033521\|Ga0316616_102889335	Not Available	647	Open in IMG/M
3300033521\|Ga0316616_104785266	Not Available	509	Open in IMG/M
3300033557\|Ga0316617_100561977	Not Available	1051	Open in IMG/M
3300034052\|Ga0373889_077414	Not Available	542	Open in IMG/M
3300034089\|Ga0373913_0210356	Not Available	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.14%
Engineered	Engineered	6.86%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	60.78%
Terrestrial	Environmental → Terrestrial	32.35%
Wastewater	Engineered → Wastewater	4.90%
Bioremediation	Engineered → Bioremediation	1.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	56.86%
Soil	Environmental → Terrestrial → Soil	29.41%
Marine	Environmental → Aquatic → Marine	3.92%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	3.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.96%
Metal	Engineered → Bioremediation → Metal	1.96%
Peat	Environmental → Terrestrial → Peat	0.98%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	19.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.63%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.78%
Lake	Environmental → Aquatic → Freshwater → Lake	4.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	3.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.96%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.96%
Pond	Environmental → Aquatic → Freshwater → Pond	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	28.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	19.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	18.63%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	10.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.90%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	3.92%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.96%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	28.43%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	16.67%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	10.78%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	10.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.84%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.90%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	3.92%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.94%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.96%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003471	Fe-reducing enrichment culture from wetland. Sample 5 with periodic nitrate additions.	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300009587	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009688	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300019252	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025772	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG (SPAdes)	Engineered	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034052	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.2	Engineered	Open in IMG/M
3300034089	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1061294341	3300001213	Wetland	MTLAEVGTLLLATLQAVGVGAVVILVLMIGASLLFDVFKLRPSGPKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRTA*
JGIcombinedJ13530_1088264662	3300001213	Wetland	MSLADIGALAGATIQAAGVGAIVVLVLMIGLSLGLDVFKLRPSGPKSLTVRSLDEALGKPVAYLPPETPRGTTDQLGNSQHPA*
FeGluNO3_100270202	3300003471	Wetland Sediment	MSLAEAGGLLIATLQAAGVGAVVILVLMIGASLGLDVFKLRPSGPKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAS*
Ga0031656_100055187	3300003858	Freshwater Lake Sediment	MSLAEVGALLVATIQAAGTGAVFILVLMIGAALALDVFKLRASGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA*
Ga0031656_100704803	3300003858	Freshwater Lake Sediment	MSFAEVGALLVATVQAAGTGAVFILVLMIGASLALDVFKLRASGPRSLTVRSLDEALGRPQTYLPPSTPRGTTDQLGNSQRAA*
Ga0031656_100801562	3300003858	Freshwater Lake Sediment	MSLAEAGALLLATIQAVGVGAVFILVLMIGSSLALDMFKLRPGGPRTLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA*
Ga0031656_100804492	3300003858	Freshwater Lake Sediment	MSVAEVGALLVATVQAAGTGAVFILVLMIGASLALDVFKLRASGPKSLTVRSLDEALGRPQTYLPPSTPRGTTDQLGNSQRAA*
Ga0055494_101653931	3300004048	Natural And Restored Wetlands	MTLAEAGALLVATLQAVGVGAVVILGLMIGAALVLDVFKLRPSGRQSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRVA*
Ga0069718_138811491	3300004481	Sediment	VSLAAIGALLAATLQGAGVVAVVILALMIGFSLALDMFKLRGSGRESLTVRSLDEALGQPQTYLPSDTPRGTTDQLGNSRRSA*
Ga0062383_102563002	3300004778	Wetland Sediment	MTFAEVGALLVSTAQAAGVGAVVILVLMIGAALALDVFKLRPSGRGSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA*
Ga0079037_1000068966	3300006224	Freshwater Wetlands	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGTTDQLGNSQHSV*
Ga0079037_1000231074	3300006224	Freshwater Wetlands	MTLAEVGALLVATVQAAGIGAVFILALMIGAALALDLFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAS*
Ga0079037_1000414403	3300006224	Freshwater Wetlands	MTLAEIGTLLVATVQAVGVGAVVILGLMIGAALVLDVFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA*
Ga0079037_1004614593	3300006224	Freshwater Wetlands	LQAAGVAAVVILVLMIGASLLLDVFKLRPSSPKSLTVRNLDEALGRPASYLPPDTPRGTTDQLNNSQRAA*
Ga0079037_1005574492	3300006224	Freshwater Wetlands	MSLAEVGSLLVATIQAAGVGAIVILVLMIGVALALDVFKLRPSGPRSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA*
Ga0079037_1009629751	3300006224	Freshwater Wetlands	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA*
Ga0079037_1010845652	3300006224	Freshwater Wetlands	MTLAEVGALLVATLQAVGVGAVVILALMIGAALILDVFKLRPSGRKSLTVRSLDEALGRPEAYLPPSTPRGTTDQLGNSQHAA*
Ga0079037_1016436781	3300006224	Freshwater Wetlands	TLQAVGVGAVVILVLMIGASLALDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA*
Ga0079037_1019976162	3300006224	Freshwater Wetlands	MSAAEVGALLVATIQAVGVGAIVILVLMIGAAFALDVFKLRPSGPTSLTVRSLDEALGRPAMYLPPSTPRGTTDQLGNSQHAA*
Ga0079037_1026177171	3300006224	Freshwater Wetlands	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRQSGPKSLTVRSLDEALGRPETYLPSSTPRGTTDQLANSQRAA*
Ga0105105_100849153	3300009009	Freshwater Sediment	MSLAEAGGLLVATIQAVGVGAVFILVLMIGASLGLDVFKLRPSGPRTLTVRSLDEALGRPETYLPPSTPRGTTDQLG
Ga0105105_104258762	3300009009	Freshwater Sediment	MNLAEAGALVVATIQAVGVGAVFILVLMIGASLALDMFKLRPSGPRTLTVRSLDEALGRPETYRPPSTPRGTTDQLGNSQRAA*
Ga0105093_100102635	3300009037	Freshwater Sediment	MNLAEAGALVVATIQAVGVGAVFILVLMIGASLALDMFKLRPSGPRTLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA*
Ga0105090_100137882	3300009075	Freshwater Sediment	MSPAEAGALLIATVQAVGVGAVFILVLMIGSSLAIDVFKLRPSGPRTLTVRSLDEALGRPETYRPPSTPRGTTDQLGNSQRSA*
Ga0102851_101704962	3300009091	Freshwater Wetlands	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGTTDQLGNSRHVV*
Ga0102851_108632463	3300009091	Freshwater Wetlands	MTLAEVGALLVATVQAAGIGAVAILVLMIGAALALDIFKLRPSGPRSLTVRSLDEALGRPESYLPPSTPRGPTDQLGNARRSA*
Ga0115026_100095283	3300009111	Wetland	MTLAEVGALLVATVQAAGIGAVFILALMIGAALALDVFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAS*
Ga0115027_109391221	3300009131	Wetland	MTLADAGALLIATLQAVGVGAVVILVLMIGASLALDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA*
Ga0105102_105568212	3300009165	Freshwater Sediment	MSFAEAGALLVATIQAGGVGAVFILVLMIGASLALDLFKLRPSGPRTLTVRSLDEALGRPETYRPPSTPRGTTDQLGNSQRSA*
Ga0113563_1000386210	3300009167	Freshwater Wetlands	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGTTDQLGNSQHVV*
Ga0113563_106957842	3300009167	Freshwater Wetlands	MSLAEVGALLVATIQAAGVGAVVILALMIGAALALDVFKLRPSGRTSMTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA*
Ga0113563_108947442	3300009167	Freshwater Wetlands	MSAAEVGALLVATIQAVGVGAIVILVLMIGAAFALDVFKLRPSGPTSLTVRSLDEALGRPALYLPPSTPRGTTDQLGNSQHAA*
Ga0113563_119251431	3300009167	Freshwater Wetlands	MMTLAEVASLLVATVQAAGIGAVVILALMIGAALALDVFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA*
Ga0113563_119563022	3300009167	Freshwater Wetlands	MTLAEVGTLLVATVQAAGIGAVVILALMIGAALALDVFKLRPSGPRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSRRAA*
Ga0115028_105073322	3300009179	Wetland	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRQSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA*
Ga0114938_11437261	3300009430	Groundwater	MTLAEVGALLVATLQAVGVGAAVILVLMIGAALVLDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA*
Ga0114939_101095922	3300009455	Groundwater	MTLAEVGALLAATLQAVGVGAAVILALMIGAALVLDVFKLRPSGRKSLTVRSLDEAMGRPESYLPPSTPRGTTDQLGNSQRAA*
Ga0115602_10083603	3300009587	Wetland	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPSSTPRGTTDQLANSQRAA*
Ga0116176_100035183	3300009688	Anaerobic Digestor Sludge	VSVSEVGALVAAALQSVGGAIATILVLMIGLSLGLDVFKLRPSGGRSLTVRSLDEALGKPQTYLPPDIPRGTTDQLGNSRRAG*
Ga0116160_10734793	3300009715	Anaerobic Digestor Sludge	VSVNEVGALVAAALQSVGGAIATILVLMIGLSLGLDVFKLRPSGGRSLTVRSLDEALGKPQTYLPPDIPRGTTDQLGNSRRAG*
Ga0173609_105348351	3300013315	Sediment	MSLAEAGGLLAATIQAVGVGAVFILVLMIGASLALDVFKLRPSGPRTLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRSA*
Ga0172286_10098611	3300019252	Wetland	MTLAEVGALLVATVQAAGIGAVFILALMIGAALALDLFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAS
Ga0209719_10712162	3300025677	Anaerobic Digestor Sludge	VSVNEVGALVAAALQSVGGAIATILVLMIGLSLGLDVFKLRPSGGRSLTVRSLDEALGKPQTYLPPDIPRGTTDQLGNSRRAG
Ga0208939_100020421	3300025772	Anaerobic Digestor Sludge	VSVSEVGALVAAALQSVGGAIATILVLMIGLSLGLDVFKLRPSGGRSLTVRSLDEALGKPQTYLPPDIPRGTTDQLGNSRRAG
Ga0209392_10236243	3300027683	Freshwater Sediment	MSPAEAGALLIATVQAVGVGAVFILVLMIGSSLAIDVFKLRPSGPRTLTVRSLDEALGRPETYRPPSTPRGTTDQLGNSQRSA
Ga0208665_102185572	3300027715	Deep Subsurface	AEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0208665_102620572	3300027715	Deep Subsurface	MSLAEVGALVVSTIQAVGVGAVAILVLMIGASLLLDVFKLRPSGPTSLTVRTLDEALGRPVSYLPPDTP
Ga0209285_100289273	3300027726	Freshwater Sediment	MNLAEAGALVVATIQAVGVGAVFILVLMIGASLALDMFKLRPSGPRTLTVRSLDEALGRPETYRPPSTPRGTTDQLGNSQRAA
Ga0209575_100460853	3300027739	Freshwater	MSLAEVGALLVATIQAAGTGAVFILVLMIGAALALDVFKLRASGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0209288_100352161	3300027762	Freshwater Sediment	MSLAEAGGLLVATIQAVGVGAVFILVLMIGASLGLDVFKLRPSGPRTLTVRSLDEALGRPETYLPPST
Ga0209798_102089313	3300027843	Wetland Sediment	MTFAEVGALLVSTAQAAGVGAVVILVLMIGAALALDVFKLRPSGRGSLTVRSLDEALGRAETYLPPSTPRGTTDQLGNSQRAA
Ga0209397_100015253	3300027871	Wetland	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0209397_103228662	3300027871	Wetland	MSLAEVGSLLVATIQAAGVGAIVILVLMIGVALALDVFKLRPSGPRSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0209397_107174762	3300027871	Wetland	MTLADAGALLIATLQAVGVGAVVILVLMIGASLALDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGN
Ga0209293_100408044	3300027877	Wetland	MTLAEVGALLVATVQAAGIGAVFILALMIGAALALDVFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAS
Ga0209450_100062322	3300027885	Freshwater Lake Sediment	MSLAEAGGLLVATIQAVGVGAVFILVLMIGASLALDVFKLRPSGPHTLTVRSLDEALGRPETYRPPSTPRGTTDQLGNSQRAA
Ga0208980_100181195	3300027887	Wetland	MTLAEVGTLLLATLQAVGVGAVVILVLMIGASLLFDVFKLRPSGPKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRTA
Ga0209496_104366172	3300027890	Wetland	MTLAEAGALLIATLQAVGVGAVVILVLMIGASLALDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0209496_106826241	3300027890	Wetland	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNS
Ga0209254_1000035916	3300027897	Freshwater Lake Sediment	MSLAEAGALLLATIQAVGVGAVFILVLMIGSSLALDMFKLRPGGPRTLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0209254_105239641	3300027897	Freshwater Lake Sediment	MSVAEVGALLVATVQAAGTGAVFILVLMIGASLALDVFKLRASGPKSLTVRSLDEALGRPQTYLPPSTPRGTTDQLGN
Ga0209254_105239651	3300027897	Freshwater Lake Sediment	MSFAEVGALLVATVQAAGTGAVFILVLMIGASLALDVFKLRASGPRSLTVRSLDEALGRPQTYLPPSTPRGTTDQLGN
Ga0209668_100511443	3300027899	Freshwater Lake Sediment	MSLAEVGALLVATIQAAGTGAVFILALMIGAALALDVFKLRRSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0209668_105283631	3300027899	Freshwater Lake Sediment	LLGATAQAVGVGAVVILILMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPEVYLPPSTPRGTNDQLGNSQRAL
Ga0209253_108958632	3300027900	Freshwater Lake Sediment	VSLASAGGLLAAVAQGAAVVAVVILILMIGLSLALDRFKLRNSGPKSLTVRSLDEALGQPQTYLPADTPRGTTDQLGNSRHPA
Ga0315292_104411881	3300032143	Sediment	MSLAEVGALLVATIQAAGTGAVFILVLMIGAALALDVFKLRASGPKSLTVRSLDEALGRPETYLPPSTP
Ga0315292_110280242	3300032143	Sediment	VSLAEVGALLVATIQAAGTGAVFILVLMIGAALALDVFKLRRSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0315292_115705281	3300032143	Sediment	MSLAEVGALLVATIQAAGTGAVFILVLMIGAALALDVFKLRASGPTSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0315283_108856771	3300032164	Sediment	AEVGALLVATIQAAGTGAVFILVLMIGAALALDVFKLRASGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0315276_108876503	3300032177	Sediment	LLVSTIQAAGTGAVFILALMIGAALALDVFKLRRSGPTSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0316604_100497683	3300033406	Soil	MSLAEAGALLVATIQAAGVGAVVILVLMIGAALALDVFKLRQSGPKSLTVRSLDEALGRPETYLPSSTPRGTTDQLANSQRAA
Ga0316605_101476053	3300033408	Soil	GALLIATLQAVGVGAVVILVLMIGASLALDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316605_103093291	3300033408	Soil	MTLAEAGTLLVATLQAVGVGAVVILVLMIGSSLGLDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGN
Ga0316605_109253602	3300033408	Soil	MTLAEVGALLVATLQAVGVGAVVILALMIGAALILDVFKLRPSGRKSLTVRSLDEALGRPEAYLPPSTPRGTTDQLGNSQHAA
Ga0316605_119898911	3300033408	Soil	MSLAEVGALLVATIQAAGVGAVVILALMIGAALALDVFKLRPSGRTSMTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316605_121612701	3300033408	Soil	MSAAEVGALLVATIQAVGVGAIVILVLMIGAAFALDVFKLRPSGPTSLTVRSLDEALGRPAMYLPPSTPRGTTDQLGNSQHAA
Ga0316605_124024632	3300033408	Soil	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGT
Ga0316603_100172324	3300033413	Soil	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGTTDQLGNSRHVV
Ga0316603_100922093	3300033413	Soil	MTLADAGALLIATLQAVGVGAVVILVLMIGASLALDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316603_100975483	3300033413	Soil	MSAAEVGALLVATIQAVGVGAIVILVLMIGAAFALDVFKLRPSGPTSLTVRSLDEALGRPAMYLPPSTPRGTTDQLGNSQRAA
Ga0316603_101982072	3300033413	Soil	MTLAEAGTLLVATLQAVGVGAVVILVLMIGSSLGLDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRPS
Ga0316622_1000149774	3300033416	Soil	MTLAEVASLLVATVQAAGIGAVVILALMIGAALALDVFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316622_1001525972	3300033416	Soil	MTLAEVGALLAATIQAVGVGAVAILALMIGAALLLDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316622_1003080792	3300033416	Soil	MTLAEIGTLLVATVQAVGVGAVVILGLMIGAALVLDVFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316622_1025139212	3300033416	Soil	TLMTLAEVGTLLVATVQAAGIGAVVILALMIGAALALDVFKLRPSGPRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSRRAA
Ga0316625_1017953241	3300033418	Soil	MTLAEVGALLVTTVQAAGIGAVFILALMIGAALALDLFKLRPSGRRSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNS
Ga0316601_1002749772	3300033419	Soil	MTLAEVGALLIATLQAVGVGAVVILVLMIGASLALDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316601_1004855882	3300033419	Soil	MSLAEVGALLVATVQAAGAGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRPA
Ga0316601_1005155272	3300033419	Soil	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGTTDHLGNSQHVV
Ga0316601_1010389811	3300033419	Soil	MTLAEAGGLLVATLQAVGVGAVVILVLMIGASLGLDVFKLRPSGPKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRPS
Ga0326726_106744453	3300033433	Peat Soil	VSLAAIGGLLVATLEGAGAVAVVVLVLMIGLSVGVDSLKLRRSGPKSLTVRNLDEALGQPATYLPADTPRGTTDQLEHSRHAG
Ga0316600_107903822	3300033481	Soil	MSAAEVGALLVATIQAVGVGAIVILVLMIGAAFALDVFKLRPSGPTSLTVRSLDEALGRPAMYLPPSTP
Ga0316629_103444883	3300033483	Soil	MTLAEAGTLLVATLQAVGVGAVVILVLMIGSSLGLDVFKLRPSGPKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRPS
Ga0316629_103962713	3300033483	Soil	MSLAEVGALLVATVQAAGAGAVVILVLMIGAALALDVFKLRPSGPKSLTVRSLDEALGRPETYLPPSTPRGTTDQLGNSQRAA
Ga0316626_117489652	3300033485	Soil	MTLAEVGALLVATLQAVGVGAVVILALMIGAALILDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSRRAA
Ga0316621_106628813	3300033488	Soil	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGPT
Ga0316616_1028893352	3300033521	Soil	MTLAEAGALLVATLQAVGVGAVVILVLMIGASLLLDVFKLRPSGRKSLTVRSLDEALGRPESYLPPSTPRGTTDQLGNSQRAA
Ga0316616_1047852662	3300033521	Soil	MTLADIGTWLVATIQGAGVGAVVILILMIGAALVLDVFKLRPSGRKSLTVRSLDEALGRPESYLPPHTPRGTTDQLGNSQRGA
Ga0316617_1005619773	3300033557	Soil	MSLAEVGALLAATIQAVGVGAVVILVLMIGAAFALDVFKLRPSGPKSLTVRSLDEALGRPATYLPPSTPRGTTDQLGNSQHVV
Ga0316617_1006047331	3300033557	Soil	VGVGAVVILALMIGAALILDVFKLRPSGRKSLTVRSLDEALGRPEAYLPPSTPRGTTDQLGNSQHAA
Ga0373889_077414_263_514	3300034052	Sediment Slurry	MSLAEAGALLVATIQAAGTGAVFILVLMIGAALALDVFKLRASGPKSLTVRSLDEALGRPETYRPASTPRGTTDQLGNSQRAA
Ga0373913_0210356_215_466	3300034089	Sediment Slurry	VSLASAGGLLAAVAQGAVVVAVVILVLMIGLSLALDRFKLRNSGPKSLTVRSLDEALGQPQTYLPADTPRGTTDQLGNSRHPA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101444

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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