Metagenome / Metatranscriptome Family F101117

Basic Information
Family ID	F101117
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERADAEAERERAELGESVTTKRPWWKFWA
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.59 %
% of genes near scaffold ends (potentially truncated)	29.41 %
% of genes from short scaffolds (< 2000 bps)	77.45 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (95.098 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.804 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.06% β-sheet: 0.00% Coil/Unstructured: 43.94%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01521	Fe-S_biosyn	44.12
PF00037	Fer4	4.90
PF04432	FrhB_FdhB_C	3.92
PF00271	Helicase_C	3.92
PF08447	PAS_3	2.94
PF04422	FrhB_FdhB_N	1.96
PF13539	Peptidase_M15_4	1.96
PF13187	Fer4_9	1.96
PF13237	Fer4_10	1.96
PF12838	Fer4_7	1.96
PF00300	His_Phos_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	44.12
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	44.12
COG1035	Coenzyme F420-reducing hydrogenase, beta subunit	Energy production and conversion [C]	5.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.10 %
Viruses	superkingdom	All Organisms → Viruses	4.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	32.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_162060	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
2228664021\|ICCgaii200_c0756089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0691438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1376	Open in IMG/M
3300004463\|Ga0063356_100034938	All Organisms → cellular organisms → Bacteria	4898	Open in IMG/M
3300005103\|Ga0066813_1002894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300005171\|Ga0066677_10010952	All Organisms → cellular organisms → Bacteria	3929	Open in IMG/M
3300005172\|Ga0066683_10016802	All Organisms → cellular organisms → Bacteria	4009	Open in IMG/M
3300005172\|Ga0066683_10531337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005178\|Ga0066688_10267697	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300005180\|Ga0066685_10027850	All Organisms → cellular organisms → Bacteria → Proteobacteria	3470	Open in IMG/M
3300005334\|Ga0068869_101305693	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005339\|Ga0070660_100740743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300005406\|Ga0070703_10000021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75160	Open in IMG/M
3300005444\|Ga0070694_100093155	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300005446\|Ga0066686_10337078	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005447\|Ga0066689_10222863	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300005526\|Ga0073909_10074703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1289	Open in IMG/M
3300005536\|Ga0070697_100308242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1362	Open in IMG/M
3300005536\|Ga0070697_100428613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1150	Open in IMG/M
3300005536\|Ga0070697_100653906	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005553\|Ga0066695_10004841	All Organisms → cellular organisms → Bacteria	6364	Open in IMG/M
3300005555\|Ga0066692_10385049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300006573\|Ga0074055_10003505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8239	Open in IMG/M
3300006794\|Ga0066658_10781833	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009012\|Ga0066710_100023640	All Organisms → cellular organisms → Bacteria	6916	Open in IMG/M
3300009137\|Ga0066709_100002773	All Organisms → cellular organisms → Bacteria	13020	Open in IMG/M
3300009137\|Ga0066709_100044159	All Organisms → cellular organisms → Bacteria	4938	Open in IMG/M
3300009137\|Ga0066709_100280774	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300009147\|Ga0114129_12286926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300010080\|Ga0127448_178953	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010108\|Ga0127474_1049494	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010117\|Ga0127449_1016525	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010136\|Ga0127447_1100944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300010147\|Ga0126319_1425984	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010301\|Ga0134070_10373623	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300010303\|Ga0134082_10228882	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300010337\|Ga0134062_10087296	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300010337\|Ga0134062_10283655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300010397\|Ga0134124_11358606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300010403\|Ga0134123_10087820	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300011003\|Ga0138514_100041926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300011107\|Ga0151490_1414257	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300011998\|Ga0120114_1115319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012198\|Ga0137364_10309799	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300012199\|Ga0137383_10563156	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300012200\|Ga0137382_10012092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4649	Open in IMG/M
3300012201\|Ga0137365_10143422	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300012207\|Ga0137381_10109376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2351	Open in IMG/M
3300012208\|Ga0137376_11000657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300012285\|Ga0137370_10027585	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300012349\|Ga0137387_10232240	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300012351\|Ga0137386_10562961	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300012356\|Ga0137371_10005071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10336	Open in IMG/M
3300012359\|Ga0137385_10561748	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300012373\|Ga0134042_1009486	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300012376\|Ga0134032_1026869	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012382\|Ga0134038_1250431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012386\|Ga0134046_1079241	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300012392\|Ga0134043_1153445	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300012409\|Ga0134045_1467828	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300012911\|Ga0157301_10133825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300012951\|Ga0164300_10084475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1355	Open in IMG/M
3300012951\|Ga0164300_10196667	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012955\|Ga0164298_10471773	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012957\|Ga0164303_10105092	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300012958\|Ga0164299_10087625	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300012960\|Ga0164301_10670630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300012984\|Ga0164309_10281539	All Organisms → Viruses → Predicted Viral	1189	Open in IMG/M
3300012984\|Ga0164309_10918626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300012985\|Ga0164308_11835824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300013306\|Ga0163162_10058750	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300014326\|Ga0157380_11758522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300015077\|Ga0173483_10729416	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300018431\|Ga0066655_10006083	All Organisms → cellular organisms → Bacteria	4957	Open in IMG/M
3300018482\|Ga0066669_10016960	All Organisms → cellular organisms → Bacteria	3946	Open in IMG/M
3300018482\|Ga0066669_10254619	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300021080\|Ga0210382_10039747	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300025885\|Ga0207653_10000627	All Organisms → cellular organisms → Bacteria	12208	Open in IMG/M
3300025919\|Ga0207657_11108769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300025922\|Ga0207646_10024252	All Organisms → cellular organisms → Bacteria	5558	Open in IMG/M
3300025933\|Ga0207706_10790057	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300025942\|Ga0207689_11032369	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300026023\|Ga0207677_10298462	All Organisms → Viruses → Predicted Viral	1330	Open in IMG/M
3300026306\|Ga0209468_1039815	All Organisms → Viruses → Predicted Viral	1618	Open in IMG/M
3300026528\|Ga0209378_1312198	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300027458\|Ga0207602_104876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300027821\|Ga0209811_10057723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1338	Open in IMG/M
3300028787\|Ga0307323_10044140	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300028799\|Ga0307284_10279884	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300028878\|Ga0307278_10022435	All Organisms → cellular organisms → Bacteria	2912	Open in IMG/M
3300028884\|Ga0307308_10134463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300030989\|Ga0308196_1045140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300031123\|Ga0308195_1088278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300031226\|Ga0307497_10106153	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300031421\|Ga0308194_10250982	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031422\|Ga0308186_1004970	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300031716\|Ga0310813_11096180	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031720\|Ga0307469_11537473	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300032180\|Ga0307471_101738467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300034644\|Ga0370548_099087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300034681\|Ga0370546_019683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300034681\|Ga0370546_028922	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.20%
Host-Associated	Host-Associated	9.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.24%
Plants	Host-Associated → Plants	9.80%
Aquatic	Environmental → Aquatic	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.41%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027458	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-B (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02697150	2199352025	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAKDADADAERERAELGESVTTKRPWWKFWG
ICCgaii200_07560893	2228664021	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERADADAEHERAELGESVTTKRPWWKFWG
ICChiseqgaiiDRAFT_06914382	3300000033	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERADADAEHERAELGESVTTKRPWWKFWG*
Ga0063356_1000349384	3300004463	Arabidopsis Thaliana Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQDHLAKEAERADADAEHERAELGESVTTKRPWWKFWG*
Ga0066813_10028942	3300005103	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAEHADADAERERAELGESVTTKRPWWKFWG*
Ga0066677_100109524	3300005171	Soil	MSDTNTPETPGGGMGDDMEEMFLDEAKKDHLASEAERADADADRERAELGGSVTPKRPWWKFWA*
Ga0066683_100168026	3300005172	Soil	MSDTNTPETPGGRLGDDMEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPWWKFWA*
Ga0066683_105313371	3300005172	Soil	MSMFNTNEPRTPGGRMGDDMEKTFLDEAKQEHLAKEAKHADAEADRERAELGESVTPKRPWWKFWA*
Ga0066688_102676972	3300005178	Soil	MSDTNTPETPGGGMGDDMEEMFLDEAKKDHLASEAERANADADRERAELGGSVTPKRPWWKFWA*
Ga0066685_100278504	3300005180	Soil	MSDTNTPETPGGRLGDDMEEMFLDEAKKDHLANEAARADAKEDRERAELGESVTPKRPWWKFWA*
Ga0068869_1013056931	3300005334	Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAEEAERADADAEHERAELGESVTTKRPWWKFWG*
Ga0070660_1007407432	3300005339	Corn Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLANEAERADADAEHERAELGESVTTKRPWWKFWG*
Ga0070703_1000002140	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKKDHLANEAKRADAEEDRERAELGESVTPKRPWWKFWA*
Ga0070694_1000931551	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GGNPMSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERAEADAEHERAELGESVTTKRPWWKFWG*
Ga0066686_103370781	3300005446	Soil	TPGGRLGDDMEEMFLDEAKKDHLANEAERANAKEDPERAELGESVTPKRPWWKFWA*
Ga0066689_102228633	3300005447	Soil	MSDTNTPETPGGGMGDDMEEMFLDEAKKDHLASEAERANADADRERAELGESVTPKRPWWRFWA*
Ga0073909_100747034	3300005526	Surface Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAQRADADAEHERAELGESVTTKRPWWKFWG*
Ga0070697_1003082421	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKKDHLANEAKRADAEEDRERAELGESV
Ga0070697_1004286131	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERADAEAERERAELGEAATTKRPWWKFWA*
Ga0070697_1006539062	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSMFNMNEPRTPGGRMGDGMEEMFLDEAKQDHLANEAERADAEEDRERAELGESVTPKRPWWKFWA*
Ga0066695_100048415	3300005553	Soil	MSDTNTPETPGGRLGDDMEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPPWWKFWA*
Ga0066692_103850493	3300005555	Soil	MSMFNTNEPRTPGGRMGDDMEKTFLDEAKQEHLAKEAKQADAEADRERAELGEPVTPKRPWWKFWA*
Ga0074055_100035056	3300006573	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAEHADAEAERERAELGESVTTKRPWWKFWG*
Ga0066658_107818331	3300006794	Soil	MFLDEAKKDHLADEAERADVEEDRERAELGESVTPKRPWWKFWA*
Ga0066710_1000236406	3300009012	Grasslands Soil	MSDTNTPETPGGGMGDDMQEMFLDEAEKDQLAKAAERADAEAEQERAELGESAAPKRPWWKFWA
Ga0066709_1000027738	3300009137	Grasslands Soil	MSDTNTPETPGGGMGDDMQEMFLDEAEKDQLAKAAERADAEAEQERAELGESATPKRPWWKFWA*
Ga0066709_1000441597	3300009137	Grasslands Soil	MGDDMEEMFLDEAKEEHRAKEAERADAQADLERAELGESVTPKRPWWKFWG*
Ga0066709_1002807745	3300009137	Grasslands Soil	MSDTNTPETPGGRMGDDMQEMFLDEAKDEHLAGEAERADAEADRERAELGESVTPKRPWWKFWA*
Ga0114129_122869263	3300009147	Populus Rhizosphere	MGDDMEKMFLDEAKQEHLAKEAERADAEAERERAELGEAATTKRPWWKFWA*
Ga0127448_1789533	3300010080	Grasslands Soil	RLGDDMEEMFLDEAKKDHLANEAARADAKEDRERAELGESVTPKRPWWKFWA*
Ga0127474_10494941	3300010108	Grasslands Soil	NTPETPGGRLGDDMEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPWWKFWA
Ga0127449_10165253	3300010117	Grasslands Soil	NTPETPGGRLGDDMEEMFLDEAKKDHLANEAARADAKEDRERAELGESVTPKRPWWKFWA
Ga0127447_11009442	3300010136	Grasslands Soil	MEEMFLDEAKKDHLANEAARADAKEDRERAELGESVTPKRPWWKFWA*
Ga0126319_14259841	3300010147	Soil	GGNPMSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLANEAKDADADAERERAELGESVTTKRPWWKFWG*
Ga0134070_103736233	3300010301	Grasslands Soil	LDEAKKDHLANEAERADAKEDRERAELGESVTPKRPWWKFWA*
Ga0134082_102288823	3300010303	Grasslands Soil	MEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPWWKFWA*
Ga0134062_100872962	3300010337	Grasslands Soil	MEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPPWWKFWA*
Ga0134062_102836552	3300010337	Grasslands Soil	MSDTNEPESPGGRMGDDMEEMFLDEAKQEHRAKEAEQADAQADLERADLGESVTPKRPWWKFWG*
Ga0134124_113586062	3300010397	Terrestrial Soil	MGDDMEKMFLDEAKKDHLANEAKRADEEEYRERAELGESVTTKRPWWKFWG*
Ga0134123_100878202	3300010403	Terrestrial Soil	MGDDMEKMFLDEAKQEHLAEEAERADADAEHERAELGESVTTKRPWWKFWG*
Ga0138514_1000419263	3300011003	Soil	MGDDMEKMFLDEAKQEHLAKEAESADADAEHERAELGESVTTKRPWWK
Ga0151490_14142574	3300011107	Soil	GRMGDDMEKMFLDEAKQEHLAKEAEHADAEAERERAELGESVTTKRPWWKFWG*
Ga0120114_11153191	3300011998	Permafrost	GEMGDDMEEMFLDEAKKDHLAKEAGRADAEEDRERAELGESVNPKRPWWKFWA*
Ga0137364_103097993	3300012198	Vadose Zone Soil	NTPETPGGRMGDDMQEMFLDEAKDEHLAGEAERADAEADRERAELGESVTPKRPWWKFWA
Ga0137383_105631561	3300012199	Vadose Zone Soil	SMSDTNTPETPGGGMGDDMEETFLDEAKKDHLANEAERADAEEDLERAELGESVTRKRPWWKFWA*
Ga0137382_100120924	3300012200	Vadose Zone Soil	MSDPTMPETPGGRMGDDMEEMFLDEAKKDHLADEAEKADAEADRERAELGEPVATKRPWWKFWA*
Ga0137365_101434223	3300012201	Vadose Zone Soil	EEHRAKEAERADAQADLERAELGESVTPKRPWWKFWG*
Ga0137381_101093765	3300012207	Vadose Zone Soil	MSMFNTNEPRTPGGRMGDDMEKTFLDEAEQERLAKEAKQADAEADRERAELGESVTPKRPWWKFWG*
Ga0137376_110006572	3300012208	Vadose Zone Soil	MSMFNTNEPRTPGGRMGDDMEKTFLDEAKQEHLAKEAKQADAEADRERAELGESVTPKRPWWKFWA*
Ga0137370_100275853	3300012285	Vadose Zone Soil	MSDTNEPESPGGRMGDDMEEMFLDEAKQEHRAKEAERADAQADLERAELGESVTPKRPWWKFWG*
Ga0137387_102322403	3300012349	Vadose Zone Soil	MSDTNTPETPGGGMGDDMEEMFLDEAKRDHLANEAERADSEEDLERAELGESVTSKRPWWKFWA*
Ga0137386_105629614	3300012351	Vadose Zone Soil	MGDDMEEMFLDEAKKDHLANEAERADAEEDRERVELGESVTPKRPWWKFWA*
Ga0137371_100050717	3300012356	Vadose Zone Soil	MGDDMEEMFLDEAKEEHRAKEAERGDAQADLERAELGESVTPKRPWWKFWG*
Ga0137385_105617482	3300012359	Vadose Zone Soil	MGDDMEKTFLDEAEQEHLAKEAKQADAEADRERAELGESVTPKRPWWKFWA*
Ga0134042_10094862	3300012373	Grasslands Soil	MEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPWWKFWG*
Ga0134032_10268691	3300012376	Grasslands Soil	MEEMFLDEAKKDHLANEAERANAKEDPERAELGESVTPKRPWWKFWA*
Ga0134038_12504312	3300012382	Grasslands Soil	MSDTNTPETPGGRLGDDMEEMFLDEAKKDHLANEAERADAKEDRERA*
Ga0134046_10792411	3300012386	Grasslands Soil	PETPGGRLGDDMEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPWWKFWA*
Ga0134043_11534454	3300012392	Grasslands Soil	GDDMEKMFLDEAKQEHLAKEAKDADADAERERAELGESVTTKRPWWKFWG*
Ga0134045_14678283	3300012409	Grasslands Soil	AKNDHLANEAERADAKEDRERAELGESVTPKRPWWKFWA*
Ga0157301_101338252	3300012911	Soil	MGDDMEKMFLDEAKQEHLAKEAEDADADAERERAELGESVTTKRPWWKFWA*
Ga0164300_100844753	3300012951	Soil	MGDDMEKMFLDEAKQEHLAKEAQRADADAEHERAELGESVTTKRPWWKFWG*
Ga0164300_101966674	3300012951	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAKDADAEAERERAELGESVTTKRPWWKFWG*
Ga0164298_104717733	3300012955	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLEEAKQEHLAKEAKDADADAERERAELGESVTTKRPWWKFWA*
Ga0164303_101050922	3300012957	Soil	MGDDMEKMFLDEAKQDHLANEAKDADADAERERAELGESVTTKRPWWKFWA*
Ga0164299_100876253	3300012958	Soil	MGDDMEKMFLDEAKQDHLAKEAEQADAEAERERAELGESVTTKRPWWKFWG*
Ga0164301_106706301	3300012960	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLEEAKQEHLAKEAKDADADAERERAELGESVTTKRPWWKFWG*
Ga0164309_102815391	3300012984	Soil	MGDDMEKMFLEEAKQEHLAKEAKDADADAERERAELGESVTTKRPWWKFWA*
Ga0164309_109186261	3300012984	Soil	MGDDMEKMFLDEAKQEHLAKEAQRADADAEHERAELGESVTTKR
Ga0164308_118358242	3300012985	Soil	MGDDMEKMFLDEAKQEHLAKEAKDADAEAERERAELGESVTTKRPWWKFWA*
Ga0163162_100587505	3300013306	Switchgrass Rhizosphere	MGDDMEKMFLDEAKQEHLAEEAERADADAEHERAELGESVKTKRPWWKFWA*
Ga0157380_117585221	3300014326	Switchgrass Rhizosphere	MGDDMEKMFLDEAKQEHLAKEAQRADADAEHERAEL
Ga0173483_107294163	3300015077	Soil	EAKQEHLAKEAEQADAEAEHERAELGESVTTKRPWWKFWG*
Ga0066655_100060835	3300018431	Grasslands Soil	MSDTNTPETPGGRLGDDMEEMFLDEAKKDHLANEAERANAKEDPERAELGESVTPKRPWWKFWA
Ga0066669_100169602	3300018482	Grasslands Soil	MSDTNTPETPGGRLGDDMEEMFLDEAKKDHLANEAARADAKEDRERAELGESVTPKRPWWKFWA
Ga0066669_102546192	3300018482	Grasslands Soil	MSDTNEPESPGGRMGDDMEEMFLDEAKQEHRAKEAERADAQADLERAELGESVTPKRPWWKFWG
Ga0210382_100397473	3300021080	Groundwater Sediment	MSDPTMPETPGGRMGDDMEEMFLDEAKKDHLADEAERADADAERERAELGESVTTKRPWWKFWA
Ga0207653_100006277	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKKDHLANEAKRADAEEDRERAELGESVTPKRPWWKFWA
Ga0207657_111087692	3300025919	Corn Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLANEAERADADAEHERAELGESVTTKRPWWKFWG
Ga0207646_100242525	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKKDHLANEAKRADAEEDRERAELGESVTTKRPWWKFWA
Ga0207706_107900573	3300025933	Corn Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAQRADADAEHERAELGESVTTKRPWWKFWA
Ga0207689_110323691	3300025942	Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAEEAERADADAEHERAELGESVKTKRPWWKFWG
Ga0207677_102984622	3300026023	Miscanthus Rhizosphere	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAEEAERADADAEHERAELGESVTTKRPWWKFWG
Ga0209468_10398153	3300026306	Soil	MSDTNTPETPGGRLGDDMEEMFLDEAKKDHLANEAERADAKEDRERAELGESVTPKRPWWKFWA
Ga0209378_13121981	3300026528	Soil	DDMEEMFLDEAKKDHLASEAERANADADRERAELGESVTPKRPWWRFWA
Ga0207602_1048761	3300027458	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQDHLAKEAERADADAEHERAELGESVTTKRPWWKFWG
Ga0209811_100577233	3300027821	Surface Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAQRADADAEHERAELGESVTTKRPWWKFWG
Ga0307323_100441403	3300028787	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAEHADADAERERAELGESVTTKRPWWKFWA
Ga0307284_102798843	3300028799	Soil	EHLAKEAEQADAEAEHERAELGESVTTKRPWWKFWA
Ga0307278_100224355	3300028878	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAEQADAEADRERAELGESVTTKRPWWKFWG
Ga0307308_101344633	3300028884	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERADAEAERERAELGESVTTKR
Ga0308196_10451402	3300030989	Soil	MSDPTMPETPGGRMGDDMEEMFLDEAKKDHLADEAERAVADAERERAELGESVTTKRPWWKFWA
Ga0308195_10882781	3300031123	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAEQADAEAEHERAKLGESVTTKRPWWKFWA
Ga0307497_101061532	3300031226	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLEEAKQEHLAKEAKDADADAERERAELGESVTTKRPWWKFWG
Ga0308194_102509823	3300031421	Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERADAEAERERAELGESVTTKRPWWKFWA
Ga0308186_10049702	3300031422	Soil	MSDPTMPETPGGRMGDDMEEMFLDEAKKDHLADEAEKADAEADRERTELGEPVTTKRPWWKFWG
Ga0310813_110961803	3300031716	Soil	SRRQGGNPMSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERADADAEHERAELGESVTTKRPWWKFWG
Ga0307469_115374733	3300031720	Hardwood Forest Soil	EQEHLAKEAKQADAEADRERAELGESVTPKRPWWKFWA
Ga0307471_1017384673	3300032180	Hardwood Forest Soil	MSMFNTNEPRTPGGRMGDDMEKMFLDEAKQEHLAKEAERAEADAEHERAELGESVTTKRPWWKFWA
Ga0370548_099087_467_586	3300034644	Soil	MGDDMEKMFLDEAKQEHLAKEAERADAEAERERAELGESV
Ga0370546_019683_31_225	3300034681	Soil	MSDPTMPETPGGRMGDDMEEMFLDEAKKDHLADEAEKADAEADRERAELGEPVTTKRPWWKFWA
Ga0370546_028922_14_169	3300034681	Soil	MGDDMEEMFLDEAKKDHLADEAERADADAERERAELGESVTTKRPWWKFWA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101117

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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