Metagenome / Metatranscriptome Family F101100

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101100
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	66 residues
Representative Sequence	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE
Number of Associated Samples	52
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.39 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (67.647 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (85.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (35.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.92% β-sheet: 13.85% Coil/Unstructured: 49.23%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02697	VAPB_antitox	4.00
PF01507	PAPS_reduct	4.00
PF00145	DNA_methylase	3.00
PF00589	Phage_integrase	2.00
PF03693	ParD_antitoxin	1.00
PF01972	SDH_sah	1.00
PF00239	Resolvase	1.00
PF01555	N6_N4_Mtase	1.00
PF13620	CarboxypepD_reg	1.00
PF13360	PQQ_2	1.00
PF01844	HNH	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG1753	Predicted antitoxin, CopG family	Defense mechanisms [V]	4.00
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	3.00
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	2.00
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.00
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.00
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.00
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.00
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.00
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
All Organisms	root	All Organisms	32.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
cellular organisms	root	All Organisms → cellular organisms	16.67 %
Viruses	superkingdom	All Organisms → Viruses	15.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.82 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	7.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	6.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.94 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	4.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.94 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	4.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.96 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3.92 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
Veillonellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales	0.98 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	3.92 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	1.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	0.98 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.98 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.98 %
Veillonellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	3.92 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	1.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
Megasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera	0.98 %
unclassified Bacteroidales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales	0.98 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	0.98 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.69 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	3.92 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	0.98 %
Megasphaera massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera massiliensis	0.98 %
Bacteroidetes bacterium ADurb.BinA104	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	0.98 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111018\|Meso_c1186227	Not Available	522	Open in IMG/M
2209111018\|Meso_c1271665	Not Available	507	Open in IMG/M
2209111018\|Meso_c469652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	508	Open in IMG/M
3300000482\|Lynggard_1005767	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	5813	Open in IMG/M
3300001975\|Draft_10469652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	512	Open in IMG/M
3300001975\|Draft_10590500	Not Available	509	Open in IMG/M
3300001975\|Draft_11186227	Not Available	522	Open in IMG/M
3300002168\|JGI24712J26585_10039670	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2156	Open in IMG/M
3300002168\|JGI24712J26585_10162252	Not Available	655	Open in IMG/M
3300002170\|JGI24711J26586_10036457	All Organisms → Viruses → Predicted Viral	1791	Open in IMG/M
3300002170\|JGI24711J26586_10126603	Not Available	660	Open in IMG/M
3300002173\|JGI24709J26583_10045526	All Organisms → Viruses → Predicted Viral	1817	Open in IMG/M
3300002173\|JGI24709J26583_10208607	Not Available	523	Open in IMG/M
3300002174\|JGI24710J26742_10037070	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300002174\|JGI24710J26742_10134901	Not Available	786	Open in IMG/M
3300002174\|JGI24710J26742_10166525	Not Available	663	Open in IMG/M
3300002174\|JGI24710J26742_10214442	Not Available	544	Open in IMG/M
3300002174\|JGI24710J26742_10233743	Not Available	509	Open in IMG/M
3300002377\|JGI24500J29687_10133035	Not Available	1015	Open in IMG/M
3300002392\|JGI24503J29689_10075099	Not Available	654	Open in IMG/M
3300002898\|draft_10133207	Not Available	1618	Open in IMG/M
3300002898\|draft_10532663	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	509	Open in IMG/M
3300006584\|Ga0079086_1133585	Not Available	799	Open in IMG/M
3300006801\|Ga0079223_10309643	Not Available	977	Open in IMG/M
3300006801\|Ga0079223_10882700	Not Available	565	Open in IMG/M
3300006801\|Ga0079223_11085236	Not Available	501	Open in IMG/M
3300006805\|Ga0075464_10238624	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1085	Open in IMG/M
3300009095\|Ga0079224_100906325	All Organisms → Viruses → Predicted Viral	1260	Open in IMG/M
3300009095\|Ga0079224_104839677	Not Available	524	Open in IMG/M
3300009121\|Ga0118671_1002383	Not Available	10089	Open in IMG/M
3300009121\|Ga0118671_1009790	All Organisms → Viruses → Predicted Viral	3528	Open in IMG/M
3300009121\|Ga0118671_1024554	All Organisms → Viruses → Predicted Viral	1886	Open in IMG/M
3300009121\|Ga0118671_1026192	Not Available	1807	Open in IMG/M
3300009122\|Ga0118674_1043459	Not Available	1105	Open in IMG/M
3300009122\|Ga0118674_1055562	Not Available	940	Open in IMG/M
3300009122\|Ga0118674_1064135	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	856	Open in IMG/M
3300009362\|Ga0118673_1104947	Not Available	788	Open in IMG/M
3300009362\|Ga0118673_1127368	Not Available	688	Open in IMG/M
3300009607\|Ga0123327_1053170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1646	Open in IMG/M
3300009607\|Ga0123327_1167532	Not Available	734	Open in IMG/M
3300009642\|Ga0123331_1082363	Not Available	1058	Open in IMG/M
3300009647\|Ga0123326_1108280	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	919	Open in IMG/M
3300009647\|Ga0123326_1188511	Not Available	637	Open in IMG/M
3300009647\|Ga0123326_1230889	Not Available	561	Open in IMG/M
3300009647\|Ga0123326_1234517	Not Available	555	Open in IMG/M
3300009666\|Ga0116182_1270595	Not Available	713	Open in IMG/M
3300009669\|Ga0116148_1339058	Not Available	606	Open in IMG/M
3300009670\|Ga0116183_1013296	All Organisms → cellular organisms → Archaea	6499	Open in IMG/M
3300009670\|Ga0116183_1122272	All Organisms → Viruses → Predicted Viral	1328	Open in IMG/M
3300009671\|Ga0123334_1219458	Not Available	861	Open in IMG/M
3300009671\|Ga0123334_1446950	Not Available	537	Open in IMG/M
3300009681\|Ga0116174_10146851	Not Available	1235	Open in IMG/M
3300009693\|Ga0116141_10443556	Not Available	661	Open in IMG/M
3300009707\|Ga0116195_1058098	Not Available	888	Open in IMG/M
3300009715\|Ga0116160_1373954	Not Available	519	Open in IMG/M
3300009770\|Ga0123332_1146627	Not Available	1038	Open in IMG/M
3300009773\|Ga0123333_10117413	All Organisms → Viruses → Predicted Viral	1264	Open in IMG/M
3300009868\|Ga0130016_10711548	Not Available	610	Open in IMG/M
3300014203\|Ga0172378_10681420	Not Available	751	Open in IMG/M
3300014203\|Ga0172378_11278823	Not Available	517	Open in IMG/M
3300014204\|Ga0172381_10715915	Not Available	757	Open in IMG/M
3300014206\|Ga0172377_10923844	Not Available	677	Open in IMG/M
3300014206\|Ga0172377_11137222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera massiliensis	596	Open in IMG/M
3300015214\|Ga0172382_10458770	Not Available	944	Open in IMG/M
3300015214\|Ga0172382_10477169	Not Available	919	Open in IMG/M
3300015214\|Ga0172382_10477169	Not Available	919	Open in IMG/M
3300015214\|Ga0172382_10780548	Not Available	657	Open in IMG/M
3300015214\|Ga0172382_10790580	Not Available	651	Open in IMG/M
3300015214\|Ga0172382_10833866	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	628	Open in IMG/M
3300015214\|Ga0172382_11163902	Not Available	502	Open in IMG/M
3300025393\|Ga0208041_1017112	Not Available	1534	Open in IMG/M
3300025393\|Ga0208041_1068973	Not Available	510	Open in IMG/M
3300025677\|Ga0209719_1075806	All Organisms → Viruses → Predicted Viral	1087	Open in IMG/M
3300025677\|Ga0209719_1122616	Not Available	752	Open in IMG/M
3300025682\|Ga0209718_1072012	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300025708\|Ga0209201_1066464	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1427	Open in IMG/M
3300025714\|Ga0208458_1255025	Not Available	524	Open in IMG/M
3300025730\|Ga0209606_1116484	Not Available	980	Open in IMG/M
3300025772\|Ga0208939_1135950	Not Available	891	Open in IMG/M
3300026194\|Ga0209509_1000691	All Organisms → cellular organisms → Bacteria	29069	Open in IMG/M
3300026194\|Ga0209509_1026845	All Organisms → Viruses → Predicted Viral	1743	Open in IMG/M
3300026195\|Ga0209312_1024778	All Organisms → Viruses → Predicted Viral	2054	Open in IMG/M
3300026195\|Ga0209312_1024778	All Organisms → Viruses → Predicted Viral	2054	Open in IMG/M
3300026195\|Ga0209312_1104460	Not Available	721	Open in IMG/M
3300026198\|Ga0209313_1015346	Not Available	2410	Open in IMG/M
3300026311\|Ga0209723_1086050	All Organisms → Viruses → Predicted Viral	1361	Open in IMG/M
3300027711\|Ga0209075_1136962	Not Available	1053	Open in IMG/M
3300027711\|Ga0209075_1153398	Not Available	974	Open in IMG/M
3300027711\|Ga0209075_1307739	Not Available	610	Open in IMG/M
3300028601\|Ga0265295_1066036	All Organisms → Viruses → Predicted Viral	2037	Open in IMG/M
3300028602\|Ga0265294_10050101	Not Available	3735	Open in IMG/M
3300028602\|Ga0265294_10154578	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1723	Open in IMG/M
3300028602\|Ga0265294_10356035	Not Available	945	Open in IMG/M
3300028602\|Ga0265294_10682724	Not Available	589	Open in IMG/M
3300028603\|Ga0265293_10119882	Not Available	2022	Open in IMG/M
3300028603\|Ga0265293_10131155	All Organisms → Viruses → Predicted Viral	1894	Open in IMG/M
3300028603\|Ga0265293_10196986	All Organisms → Viruses → Predicted Viral	1399	Open in IMG/M
3300028603\|Ga0265293_10383533	Not Available	854	Open in IMG/M
3300028603\|Ga0265293_10400222	Not Available	828	Open in IMG/M
3300028603\|Ga0265293_10431350	Not Available	782	Open in IMG/M
3300029822\|Ga0134854_1002716	All Organisms → cellular organisms → Bacteria	13167	Open in IMG/M
3300029825\|Ga0134835_1001347	Not Available	28443	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	85.29%
Environmental	Environmental	14.71%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	27.45%
Solid Waste	Engineered → Solid Waste	22.55%
Bioreactor	Engineered → Bioreactor	20.59%
Biotransformation	Engineered → Biotransformation	12.75%
Terrestrial	Environmental → Terrestrial	7.84%
Aquatic	Environmental → Aquatic	6.86%
Unclassified	Engineered → Unclassified	1.96%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	26.47%
Landfill	Engineered → Solid Waste → Landfill	19.61%
Anaerobic	Engineered → Bioreactor → Anaerobic	18.63%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	12.75%
Soil	Environmental → Terrestrial → Soil	7.84%
Freshwater	Environmental → Aquatic → Freshwater	5.88%
Grass	Engineered → Solid Waste → Grass	2.94%
Unclassified	Engineered → Unclassified → Unclassified	1.96%
Unclassified	Engineered → Bioreactor → Unclassified	1.96%
Marine	Environmental → Aquatic → Marine	0.98%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	26.47%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	19.61%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	18.63%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	7.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.88%
Composting	Engineered → Solid Waste → Grass → Composting	2.94%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	1.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	1.96%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	26.47%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	19.61%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	18.63%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	5.88%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	2.94%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	1.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	17.65%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	17.65%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	16.67%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	12.75%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	7.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	5.88%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	2.94%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	2.94%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	1.96%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	1.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.98%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.98%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300000482	Anaerobic digester microbial communities from Northern Denmark, sample from Lynggard manure	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002377	Biogas fermentation microbial communities from Germany - Plant 2 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300006584	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Met_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006801	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009121	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.A IDBA	Engineered	Open in IMG/M
3300009122	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C13.But.B IBDA	Engineered	Open in IMG/M
3300009362	Syntrophic microbial communities from biogas reactors - R1.C13.But.A IBDA	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009707	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009770	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA	Engineered	Open in IMG/M
3300009773	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNA	Engineered	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300025393	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025772	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026195	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026198	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027711	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011 (SPAdes)	Environmental	Open in IMG/M
3300028601	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Methane capture system biofilm	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300029825	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-1-2-440-M	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Meso_11862271	2209111018	Solid Waste From Bioreactor	PGGPHEVQRMKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENREMD
Meso_12716651	2209111018	Solid Waste From Bioreactor	MKPVFRVESANDEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEER
Meso_4696521	2209111018	Solid Waste From Bioreactor	MKLVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECN
Lynggard_100576711	3300000482	Anaerobic Digester	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEER*
Draft_104696521	3300001975	Biogas Fermenter	MKLVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNR*
Draft_105905001	3300001975	Biogas Fermenter	MKPVFRVESANDEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEER*
Draft_111862271	3300001975	Biogas Fermenter	SGPGGPHEVQRMKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENREMD*
JGI24712J26585_100396705	3300002168	Biogas Fermentantion	MKLVFRVESANEEIIRGGWYLLADSLAAAREIYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
JGI24712J26585_101622522	3300002168	Biogas Fermentantion	MKPVFRVESANEEVVRGGWYLLADSLAAAREIYPAHVFPSMTFIEVGKGLCIECNRRAVDALVEE*
JGI24711J26586_100364574	3300002170	Biogas Fermentantion	MKLVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEK*
JGI24711J26586_101266033	3300002170	Biogas Fermentantion	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVEC
JGI24709J26583_100455262	3300002173	Biogas Fermentantion	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENRKEE*
JGI24709J26583_102086071	3300002173	Biogas Fermentantion	KPEKPGGAATCTRPGGPHEVQRMKLVFRVESANXEXIRGGWYLLADSLAAAREIYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
JGI24710J26742_100370702	3300002174	Biogas Fermentantion	MKPVFRVESANDEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEKE*
JGI24710J26742_101349012	3300002174	Biogas Fermentantion	MKPVFRVESANEEIIRGGWYLLADSLAAAREIYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEER*
JGI24710J26742_101665252	3300002174	Biogas Fermentantion	MKPVFRVESANEEIIRGGWYLLADSLAAAREIYPAHLFPSMTFIEVGKGLCVECNRRAVDVLVEE*
JGI24710J26742_102144422	3300002174	Biogas Fermentantion	ETVFRVESANEEIIRGGWYLLADSLAAAREVYPAHVFPSMTFVEVGKGLCVECNRRAVDALVENRKEE*
JGI24710J26742_102337431	3300002174	Biogas Fermentantion	PGGAATCTRPGGPHEVQRMKLVFRVESANEENIRGGWYLLADSLAAAREIYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
JGI24500J29687_101330353	3300002377	Biogas Fermentantion	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENRKVE*
JGI24503J29689_100750992	3300002392	Biogas Fermentantion	MKLVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
draft_101332074	3300002898	Biogas Fermenter	MKTVFRVESASEENVRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRAVDALVEK*
draft_105326631	3300002898	Biogas Fermenter	MKPVFRVESANEEIIRGGWYLMADSLAAAREVYPAHLFPSMTFVEVGKGLCVECNRRAVDALVEE*
Ga0079086_11335852	3300006584	Anaerobic Digestor Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE*
Ga0079223_103096431	3300006801	Agricultural Soil	RMKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEER*
Ga0079223_108827003	3300006801	Agricultural Soil	MKLVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENREMD*
Ga0079223_110852362	3300006801	Agricultural Soil	MKPVFRVESANEEAVRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGWGLCVECNRRAVDALVENSSMGADE*
Ga0075464_102386242	3300006805	Aqueous	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEK*
Ga0079224_1009063252	3300009095	Agricultural Soil	MKPVFRVESANEEIVRGGWYLVADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENREMD*
Ga0079224_1048396772	3300009095	Agricultural Soil	MKLVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
Ga0118671_100238311	3300009121	Anaerobic Wastewater Sludge	VKPVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE*
Ga0118671_10097903	3300009121	Anaerobic Wastewater Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREGYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE*
Ga0118671_10245544	3300009121	Anaerobic Wastewater Sludge	MKLVFRVESANEEIIRGGWYLLADSLAAAREVYPAHVFPSMTFVEVGKGLCVECNRRAVDALVENRKEE*
Ga0118671_10261923	3300009121	Anaerobic Wastewater Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVENREMD*
Ga0118674_10434594	3300009122	Anaerobic Wastewater Sludge	MKLVFRVESANEEIIRGGWYLLADSLAAAREVYPAHVFPSMTFVEVGKGLCVECNRRAVDALVEE*
Ga0118674_10555623	3300009122	Anaerobic Wastewater Sludge	MKPVFRVESANDEIIRGGWYLMADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE*
Ga0118674_10641351	3300009122	Anaerobic Wastewater Sludge	MKPVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVE
Ga0118673_11049473	3300009362	Anaerobic Wastewater Sludge	MKTVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGKGLCVECNRRAVD
Ga0118673_11273682	3300009362	Anaerobic Wastewater Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHVFPSMTFVEVGKGLCVECNRRAVDALVENRKEE*
Ga0123327_10531702	3300009607	Anaerobic Biogas Reactor	MKTVFRVESANEENIRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRAVDALVEE*
Ga0123327_11675321	3300009607	Anaerobic Biogas Reactor	MKTVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGKGLCVECNRRAVDALVER*
Ga0123331_10823635	3300009642	Anaerobic Biogas Reactor	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSTTLIEVGKGLCVECNRRAVDALVENKKVD*
Ga0123326_11082802	3300009647	Anaerobic Biogas Reactor	MKTVFRVESANDEIIRGGWYLMADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNHRAVDALVENRGMD*
Ga0123326_11885111	3300009647	Anaerobic Biogas Reactor	KPVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE*
Ga0123326_12308891	3300009647	Anaerobic Biogas Reactor	RVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGKGLCVECNRRAVDALVER
Ga0123326_12345171	3300009647	Anaerobic Biogas Reactor	KPVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENKKVD*
Ga0116182_12705952	3300009666	Anaerobic Digestor Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHVFPSMTFIEVGKGLCVECNRRAVDALVENSSTED*
Ga0116148_13390583	3300009669	Anaerobic Digestor Sludge	MKSVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
Ga0116183_10132962	3300009670	Anaerobic Digestor Sludge	MKTVFRVESANEENIRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRAVDALVEER*
Ga0116183_11222723	3300009670	Anaerobic Digestor Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVENSSTED*
Ga0123334_12194583	3300009671	Anaerobic Biogas Reactor	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENKKVD*
Ga0123334_14469501	3300009671	Anaerobic Biogas Reactor	VFRVESANEEIIRGGWYLLADSLAAAREVYPAHVFPSMTFVEVGKGLCVECNRRAVDALVENRKEE*
Ga0116174_101468511	3300009681	Anaerobic Digestor Sludge	MKTVFRVESANEENIRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRA
Ga0116141_104435563	3300009693	Anaerobic Digestor Sludge	MKTVFRVESANEENIRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRAVDALVDE*
Ga0116195_10580983	3300009707	Anaerobic Digestor Sludge	MKTVFRVESANEENIRGGWYLLADSLAAAREVYPAQLFPSMTFIEVGKGLCVECNRRAVDALVEE*
Ga0116160_13739542	3300009715	Anaerobic Digestor Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
Ga0123332_11466271	3300009770	Anaerobic Biogas Reactor	PVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSTTLIEVGKGLCVECNRRAVDALVENKKVD*
Ga0123333_101174131	3300009773	Anaerobic Biogas Reactor	KTVFRVESANEENIRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRAVDALVEE*
Ga0130016_107115481	3300009868	Wastewater	MKPVFRVESANEEAVRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEER*
Ga0172378_106814204	3300014203	Groundwater	MKTVFRVESTNEENIRGGWYLLADSLAAARDIYPAHLFPSMTLVEVGEGMCVECNRRAVDALVENRKVD*
Ga0172378_112788231	3300014203	Groundwater	MKLVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRKAVDAL
Ga0172381_107159154	3300014204	Landfill Leachate	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEER*
Ga0172377_109238441	3300014206	Landfill Leachate	MKPVFRVESANEEVVRGGWYLMADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDAL
Ga0172377_111372221	3300014206	Landfill Leachate	PGGPHEVQRMKLVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNHRAVDALVENR*
Ga0172382_104587701	3300015214	Landfill Leachate	MKLVFRVESANEEIIRGGWYLLADSLAAAREIYPAHLFPSMILIEVGKGLCVECNRRAVDALVER*
Ga0172382_104771691	3300015214	Landfill Leachate	VFRVESANEENIRGGWYLLADSLAAAREVYPAHLVPSMTLIEVGTGLCVECNRRAVDALVEE*
Ga0172382_104771692	3300015214	Landfill Leachate	MKTVFRVESANEENIRGGWYLVADSLAAARDVYPAQLFPSMTLVEVGEGMCVECNRRAVDALVEER*
Ga0172382_107805481	3300015214	Landfill Leachate	KPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGKGLCVECNRRAVDALVENRNTEEKYV*
Ga0172382_107905801	3300015214	Landfill Leachate	MKLVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENRKEE*
Ga0172382_108338662	3300015214	Landfill Leachate	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPEHLFPSMTLIEVGKGLCVECNRRAVDALVEE*
Ga0172382_111639021	3300015214	Landfill Leachate	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENREMD*
Ga0208041_10171125	3300025393	Anaerobic Digestor Sludge	MKTVFRVESANEENIRGGWYLLADSLAAAREVYPAQLFPSMTFIEVGKGLCVECNRRAVDALVEE
Ga0208041_10689732	3300025393	Anaerobic Digestor Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEK
Ga0209719_10758064	3300025677	Anaerobic Digestor Sludge	MKTVFRVESANEENIRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRAVDALVEE
Ga0209719_11226162	3300025677	Anaerobic Digestor Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE
Ga0209718_10720122	3300025682	Anaerobic Digestor Sludge	MKTVFRVESANEENIRGGWYLVADSLAAARDVYPAHLFPSMTLVEVGEGMCVECNRRAVDALVEER
Ga0209201_10664643	3300025708	Anaerobic Digestor Sludge	MKSVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE
Ga0208458_12550252	3300025714	Anaerobic Digestor Sludge	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEDR
Ga0209606_11164844	3300025730	Anaerobic Digestor Sludge	DEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE
Ga0208939_11359503	3300025772	Anaerobic Digestor Sludge	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSITLIEVGKGLCVECNRRAVDALVEE
Ga0209509_100069137	3300026194	Anaerobic Biogas Reactor	VKPVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE
Ga0209509_10268456	3300026194	Anaerobic Biogas Reactor	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHVFPSMTFVEVGKGLCVECNRRAVDALVENRKEE
Ga0209312_10247783	3300026195	Anaerobic Biogas Reactor	MKTVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGKGLCVECNRRAVDALVER
Ga0209312_10247785	3300026195	Anaerobic Biogas Reactor	MKPVFRVESANDEIIRGGWYLMADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNHRAVDALVENRGMD
Ga0209312_11044602	3300026195	Anaerobic Biogas Reactor	VKPVFRVESANEENIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVED
Ga0209313_10153462	3300026198	Anaerobic Biogas Reactor	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSTTLIEVGKGLCVECNRRAVDALVENKKVD
Ga0209723_10860504	3300026311	Anaerobic Biogas Reactor	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVENRKAEP
Ga0209075_11369623	3300027711	Agricultural Soil	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEER
Ga0209075_11533981	3300027711	Agricultural Soil	MKLVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGKGLCVE
Ga0209075_13077391	3300027711	Agricultural Soil	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTFVEVGKGLCVECNRRAVDALVENRKVDDV
Ga0265295_10660364	3300028601	Landfill Leachate	MKLVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNHRAVDALVENR
Ga0265294_100501018	3300028602	Groundwater	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVD
Ga0265294_101545785	3300028602	Groundwater	MKTVFRVESTNEENIRGGWYLVADSLAAAREVYPAHLFPSMALIEVGKGLCVECNRRAVDALVED
Ga0265294_103560353	3300028602	Groundwater	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEE
Ga0265294_106827242	3300028602	Groundwater	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVD
Ga0265293_101198826	3300028603	Landfill Leachate	MKLVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVENRKE
Ga0265293_101311555	3300028603	Landfill Leachate	MKPVFRVESANEEVVRGGWYLMADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVEE
Ga0265293_101969864	3300028603	Landfill Leachate	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPEHLFPSMTLIEVGKGLCVECNRRAVDALVEE
Ga0265293_103835332	3300028603	Landfill Leachate	MKPVFRVESANEEVVRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRRAVDALVENSNTEVDGK
Ga0265293_104002222	3300028603	Landfill Leachate	MKPVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVEKE
Ga0265293_104313501	3300028603	Landfill Leachate	MKPVFRVESANDEIIRGGWYLLADSLAAAREVYPAHLFPSMTLIEVGKGLCVECNRKAVDALVER
Ga0134854_100271617	3300029822	Fermentation Pit Mud	MKTVFRVESASEENVRGGWYLVADSLAAARDVYPAQLFPSMTLVEVGEGMCVECNRRAVDALVENRKE
Ga0134835_100134719	3300029825	Fermentation Pit Mud	MKLVFRVESANEEIIRGGWYLLADSLAAAREVYPAHLFPSMTFIEVGKGLCVECNRRAVDALVER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences