NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F100549

Metagenome / Metatranscriptome Family F100549

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100549
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 133 residues
Representative Sequence VRNPPILISVLGFFGAMAGFAWLFIGLRMIGFDWFGIFGDLPAFERVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGLLDD
Number of Associated Samples 81
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.45 %
% of genes near scaffold ends (potentially truncated) 35.29 %
% of genes from short scaffolds (< 2000 bps) 90.20 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.843 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.647 % of family members)
Environment Ontology (ENVO) Unclassified
(29.412 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(33.333 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.64%    β-sheet: 0.00%    Coil/Unstructured: 38.36%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.18.1.1: Nickel-iron hydrogenase, large subunitd6z8mb_6z8m0.66332
e.18.1.0: automated matchesd5aa5c_5aa50.66031
f.70.1.1: Extracellular adhesion domain of SabAd4o5ja_4o5j0.65819
a.127.1.1: L-aspartase/fumarased7miwa17miw0.64099
a.29.13.1: Bacillus cereus metalloprotein-liked3dbya23dby0.63334


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF09851SHOCT 44.12
PF01740STAS 2.94
PF00916Sulfate_transp 2.94
PF00211Guanylate_cyc 1.96
PF02190LON_substr_bdg 0.98
PF01594AI-2E_transport 0.98
PF00149Metallophos 0.98
PF01556DnaJ_C 0.98
PF00884Sulfatase 0.98
PF13792Obsolete Pfam Family 0.98
PF001982-oxoacid_dh 0.98
PF13401AAA_22 0.98
PF00821PEPCK_GTP 0.98
PF13411MerR_1 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 2.94
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 2.94
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 2.94
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 1.96
COG0484DnaJ-class molecular chaperone with C-terminal Zn finger domainPosttranslational modification, protein turnover, chaperones [O] 0.98
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 0.98
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.98
COG1274Phosphoenolpyruvate carboxykinase, GTP-dependentEnergy production and conversion [C] 0.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.84 %
All OrganismsrootAll Organisms42.16 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120180734Not Available915Open in IMG/M
3300002568|C688J35102_120602228Not Available1230Open in IMG/M
3300002568|C688J35102_120874334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1946Open in IMG/M
3300003858|Ga0031656_10009449All Organisms → cellular organisms → Bacteria → Terrabacteria group4069Open in IMG/M
3300004000|Ga0055458_10033562All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300004026|Ga0055443_10236308Not Available581Open in IMG/M
3300004147|Ga0055515_10255682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora piscinae517Open in IMG/M
3300004153|Ga0063455_100062082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1347Open in IMG/M
3300004156|Ga0062589_101858531Not Available606Open in IMG/M
3300004157|Ga0062590_100088650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1909Open in IMG/M
3300004480|Ga0062592_100115442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1708Open in IMG/M
3300004481|Ga0069718_10008625Not Available742Open in IMG/M
3300004481|Ga0069718_10130605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia894Open in IMG/M
3300005764|Ga0066903_100648033Not Available1846Open in IMG/M
3300006864|Ga0066797_1183263Not Available731Open in IMG/M
3300009131|Ga0115027_11657917Not Available530Open in IMG/M
3300009506|Ga0118657_12742265Not Available550Open in IMG/M
3300010044|Ga0126310_10721559Not Available758Open in IMG/M
3300010045|Ga0126311_11581991Not Available551Open in IMG/M
3300011332|Ga0126317_10185860All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300011332|Ga0126317_10532849Not Available637Open in IMG/M
3300011340|Ga0151652_11037647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria862Open in IMG/M
3300012212|Ga0150985_100305829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1315Open in IMG/M
3300012212|Ga0150985_104546169Not Available912Open in IMG/M
3300012212|Ga0150985_104906972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1017Open in IMG/M
3300012212|Ga0150985_105159588Not Available694Open in IMG/M
3300012212|Ga0150985_105883658Not Available658Open in IMG/M
3300012212|Ga0150985_106191254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1279Open in IMG/M
3300012212|Ga0150985_108562786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1316Open in IMG/M
3300012212|Ga0150985_109887106Not Available1047Open in IMG/M
3300012212|Ga0150985_115079123Not Available661Open in IMG/M
3300012285|Ga0137370_10205047Not Available1157Open in IMG/M
3300012469|Ga0150984_104178564Not Available531Open in IMG/M
3300012469|Ga0150984_106320609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1401Open in IMG/M
3300012469|Ga0150984_114642106Not Available640Open in IMG/M
3300012900|Ga0157292_10010555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2035Open in IMG/M
3300012907|Ga0157283_10076552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium840Open in IMG/M
3300014264|Ga0075308_1094284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria636Open in IMG/M
3300014266|Ga0075359_1013562All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300014267|Ga0075313_1050318Not Available977Open in IMG/M
3300014307|Ga0075304_1141353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria573Open in IMG/M
3300014319|Ga0075348_1098401Not Available732Open in IMG/M
3300015200|Ga0173480_11232310Not Available507Open in IMG/M
3300015201|Ga0173478_10541259Not Available592Open in IMG/M
3300015256|Ga0180073_1023067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1160Open in IMG/M
3300015371|Ga0132258_11741422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1571Open in IMG/M
3300018476|Ga0190274_11225633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium835Open in IMG/M
3300018481|Ga0190271_13797515Not Available505Open in IMG/M
3300019229|Ga0180116_1119938Not Available571Open in IMG/M
3300019238|Ga0180112_1195697Not Available720Open in IMG/M
3300019257|Ga0180115_1077191Not Available547Open in IMG/M
3300019263|Ga0184647_1016418Not Available521Open in IMG/M
3300019263|Ga0184647_1251965Not Available578Open in IMG/M
3300019263|Ga0184647_1497587Not Available642Open in IMG/M
3300019362|Ga0173479_10556951Not Available591Open in IMG/M
3300020067|Ga0180109_1114038Not Available501Open in IMG/M
3300022213|Ga0224500_10014676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae3461Open in IMG/M
3300025554|Ga0210060_1061578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300025739|Ga0209745_1107890Not Available919Open in IMG/M
3300025846|Ga0209538_1112224Not Available1089Open in IMG/M
3300025888|Ga0209540_10225285Not Available1099Open in IMG/M
3300027885|Ga0209450_10058209Not Available2420Open in IMG/M
3300027897|Ga0209254_10064604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3148Open in IMG/M
3300027993|Ga0247749_1013333All Organisms → cellular organisms → Bacteria → Terrabacteria group826Open in IMG/M
3300029923|Ga0311347_11017216Not Available504Open in IMG/M
3300029984|Ga0311332_10412667Not Available1050Open in IMG/M
3300029990|Ga0311336_10177927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1726Open in IMG/M
3300030114|Ga0311333_10084010All Organisms → cellular organisms → Bacteria2345Open in IMG/M
3300030943|Ga0311366_10671413Not Available901Open in IMG/M
3300030986|Ga0308154_109980Not Available615Open in IMG/M
3300030988|Ga0308183_1013521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1296Open in IMG/M
3300030988|Ga0308183_1104504Not Available650Open in IMG/M
3300030988|Ga0308183_1173117Not Available546Open in IMG/M
3300031058|Ga0308189_10312127Not Available619Open in IMG/M
3300031091|Ga0308201_10202819Not Available657Open in IMG/M
3300031093|Ga0308197_10451001Not Available516Open in IMG/M
3300031099|Ga0308181_1119109Not Available589Open in IMG/M
3300031100|Ga0308180_1017938Not Available670Open in IMG/M
3300031100|Ga0308180_1025924Not Available591Open in IMG/M
3300031423|Ga0308177_1031628Not Available513Open in IMG/M
3300031722|Ga0311351_10235287All Organisms → cellular organisms → Bacteria1387Open in IMG/M
3300031772|Ga0315288_10964856Not Available764Open in IMG/M
3300031873|Ga0315297_10222138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium1560Open in IMG/M
3300031997|Ga0315278_10046173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales4257Open in IMG/M
3300032012|Ga0310902_11139896Not Available547Open in IMG/M
3300032018|Ga0315272_10738413Not Available503Open in IMG/M
3300032075|Ga0310890_11211193Not Available615Open in IMG/M
3300032143|Ga0315292_10459680All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300032156|Ga0315295_10196078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2026Open in IMG/M
3300032173|Ga0315268_10011593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales9036Open in IMG/M
3300032211|Ga0310896_10436784Not Available706Open in IMG/M
3300032256|Ga0315271_10060864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2762Open in IMG/M
3300032275|Ga0315270_10212566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales1190Open in IMG/M
3300032275|Ga0315270_10218195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae1175Open in IMG/M
3300032401|Ga0315275_10444565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1453Open in IMG/M
3300032401|Ga0315275_11641798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_69_14686Open in IMG/M
3300033416|Ga0316622_102058875Not Available663Open in IMG/M
3300033418|Ga0316625_101780617Not Available597Open in IMG/M
3300033419|Ga0316601_102247703Not Available549Open in IMG/M
3300033434|Ga0316613_10690579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria699Open in IMG/M
3300033521|Ga0316616_102730860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium664Open in IMG/M
3300034077|Ga0373899_040069Not Available574Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.65%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment11.76%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere8.82%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment6.86%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen5.88%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.90%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands4.90%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.92%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.94%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.94%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.96%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.96%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.96%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.98%
WetlandEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland0.98%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.98%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.98%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.98%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.98%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300004000Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004026Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2EnvironmentalOpen in IMG/M
3300004147Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011340Combined Assembly of Wetland MetatranscriptomesEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300014264Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rdEnvironmentalOpen in IMG/M
3300014266Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1EnvironmentalOpen in IMG/M
3300014267Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1EnvironmentalOpen in IMG/M
3300014307Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014319Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019229Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019238Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020067Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022213Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300025554Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025739Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)EnvironmentalOpen in IMG/M
3300025846Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027993Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5EnvironmentalOpen in IMG/M
3300029923II_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030986Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031100Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031423Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031722II_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300034077Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.3EngineeredOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12018073413300002568SoilVRNPPVLISVIGFFAAMAGFGWLFVGLRMIGFDWFGLFGDLQQFESVGLWGWLAIAAGILWLAAAVGMWALQPWAWAFAMVVAGISLFEAFILAISVFGTGLALAAGLLPLVIILYLNSRDVKRAFGLMEPSSNSNM*
C688J35102_12060222823300002568SoilVRNPPVLVSVLGFFGAMAGFGWLFVGLRMIGFDWFGAFGDLQQFEHVGLWGWLAIAAGILWLAAAVGLWALQPWAWAFAMVVAGISLFEAFILAISAFGTGLALAAGLLPLVIILYLNSRDVKRAFGLMDTTSQM*
C688J35102_12087433433300002568SoilVRNPPVLVSVLGFFGAMAGFGWLFVGLRMIGFDWFGLFGDLQQFEHVGLWGWLAIIAGILWLAAAVGLWALQPWAWAFAMVVAGISLFEAFILAISTFGTGLALAAGLLPLVIILYLNSRDVKRSFGLMDPPSNS*
Ga0031656_1000944933300003858Freshwater Lake SedimentMRNPPILVSVLGFFAGLAGFAWIFLGLRILGFDWFTVLGDVGQYEQAGIWGWLAIGAGVLFVAAAVGLWSLQPWAWAFAMVVAGVALFEAFLWFLEFPGTGIGLGMSIMPLIIILYLNSRDVKAQFLGGPPAD*
Ga0055458_1003356223300004000Natural And Restored WetlandsVKNPPILISIIGFFAALAGLAWIVIGLRMLGFDWFGLLGDLQRFEQTGLWGWLAIIVGVLWLAAGLGLWALQPWAWAFAVVVAAISLFEAFLWMLEYFGSGIGFAAALLPLVILFYLNSASVKKAFGLDRDMM*
Ga0055443_1023630813300004026Natural And Restored WetlandsPILVSVIGFFAALAGLAWIFLGLRVIGFDWFGVLGDVQAFEMASIWGWLAVGGGILWLAGALGLWAMQPWAWLLTIVVAGITLFEAFLWMIEFPGTGIGLGMSIMPLLIILYMNSASVKAAFGLTDPPPTM*
Ga0055515_1025568213300004147Natural And Restored WetlandsMKNPPILVSVIGFFAALAGLAWIFLGLRVIGFDWFGVLGDVQAFEMASIWGWLAVGGGILWLAGALGLWAMQPWAWLLTIVVAGITLFEAFLWMIEFPGTGIGLGMSIMPLLIILYMNSASVKAAFGLTDPPPTM*
Ga0063455_10006208213300004153SoilVRNPPVLVSVLGFFGAMAGFGWLFVGLRMIGFDWFGAFGDLQQFEHVGLWGWLAIAAGILWLAAAVGLWALQPWAWAFAMVVAGISLFEAFILAISAFGTGLALAAGLLPLVIILYLNSRDVKRAF
Ga0062589_10185853113300004156SoilMRNPPVLISVIGFFAAIAGFALLFAGLRFLGFDWFGIFGDLPRFESTGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILMLQFPGSGIGFAAALMPLLIIAYLNSRAVKASFMLSDGPPGPDMDPM*
Ga0062590_10008865043300004157SoilMRNPPVLISVIGFFGAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILSGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFFQYPGSGLGLGASLMPLLIIFYLNSRYVKASFGLGDLPAGVDE*
Ga0062592_10011544223300004480SoilMRNPPVLISVIGFFAAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFIQYPGSGLGFAASLMPLLIIFYLNSRYVKASFGLSDGQMGPDITE*
Ga0069718_1000862513300004481SedimentMKNPPILVSVIGFFAALAGFAYIFMGLRILGFDWFTVLGDVGDFEQSGIWGWLAIGVGVVWLLVAVGLWALQSWAWLAAVIVAGISLFEAFLWFLEFPGSGLGFGMALMPIIILLYLNSAGVKAAFGLKDPPPAA*
Ga0069718_1013060513300004481SedimentMRNPPILVSVLGFFAGLAGFAWIFLGLRILGFDWFTLLGDVGQYEQAGIWGWLAIGAGVLFVAAAVGLWSLQPWAWAFAMVVAGVALFEAFLWFLEFPGTGIGLGMSIMPLIIILYLNSRDVKAQFLGGPPAD*
Ga0066903_10064803323300005764Tropical Forest SoilVRNPPILISVIGFFGAMAGFAWLFFGLRMLGFDWFGIFGDLPQFEHVGIWGWLAILAGILWLAAAVGLWALQPWAWAFAVVIAGISLFEAALLMFQYFGTGLGFAAGLLPLVILLYLNSRSVKASFGLTDGGQPGATPPAS*
Ga0066797_118326323300006864SoilFAWLFIGLRLLGFDWFGLLGDLQKFEQTGLWGWLAIGVGILWIAAAVGLWALQPWAWAFAMIVAGISLFEAFLWFLEYPGTGVGFASGLLPLVIILYLNSRSVKKAFMVDAAMDG*
Ga0115027_1165791713300009131WetlandMKNPPILISVIGFFAALAGFSWLLLGLRILGFDWFTVLGDVGDFEQSGLWGWLAIGAGILWLLVAVGLWAMQPWAWLTAMIVAGISLFEAFLWMLEYPGSGIGLGMSIMPLLIILYLNTAGVKAAFGMKDPPPAA*
Ga0118657_1274226513300009506Mangrove SedimentLKNPPILISIIGFFAALAGIAWIVVGLRMLGFDWFGLLGDLQRFEQTGLWGWLAIIVGVLWLAAGLGLWALQPWAWAFAVVVAALSLFEAFLWMLEYWGSGIGIASALLPLVILFYLNSASVKKAFGLDREVI*
Ga0126310_1072155923300010044Serpentine SoilMNMRNPPILISVLGFFAALAGFAMLFAGLRLLGFDWFGLFGDVGRFNQAGLWGWLAVFAGVAWLAAALGLWATQRWAWVFAMVVAGFSLFEAFLWILEFPGSGIGFAASLLPVVVLLYLNSASVKEAFAVS*
Ga0126311_1158199113300010045Serpentine SoilVRNPPVLISVIGFFAAMAGFGWLFVGMRMIGFDWFGLFGDLQQFESVGLWGWLAIAAGILWLAAAVGMWALQPWAWAFAMVVAGISLFEAFILAISTFGSGLALAAGLLPLVIILYLNSRDVKRAFGLMDATDTTIVS*
Ga0126317_1018586013300011332SoilVRNPPVLISVIGFFAAMAGFGWLFVGLRMIGFDWFGLFGDLQQVESIGLWGWLAVAAGILWLAAAVGLWATQPWAWAFAMVVAGISLFESFILAISAFGSGLGLAAGLLPLVIILYLNSRDVKRAFGLMDGTDTTIVS*
Ga0126317_1053284923300011332SoilMRNPPVLISVIGFFAAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILAGVLWLAAAAGLWALQPWAWVFSMVVAGLSLFEAVILFFQYPGSGLGFAASLMPLLIIFYLNSRFVKASFGLSDGPAGPDITD*
Ga0151652_1103764723300011340WetlandMKNPPVLVSVLGFFVAIAGFAWLFLGLRLLGFDWFGALGDLPALESVGIWGWLAVGAGILWLLVAVGLWAMQPWAWMATMIVAGLAIFEAFLYMLSFPGSGLGLGMMILPGIIVLYMNSHDVKAQFLGDPSAA*
Ga0150985_10030582933300012212Avena Fatua RhizosphereVRNPPVLISVIGFFAAMAGFGWLFVGLRMIGFDWFGLFGDLQQFESVGLWGWLAIAAGILWLAAAVGMWALQPWAWAFAMVVAGISLFEAFILAISAFGTGLALAAGLLPLVIILYLNSRDVKRAFGLMEPTSNSGM*
Ga0150985_10454616933300012212Avena Fatua RhizosphereMAGFGWLFVGLRMIGFDWFGAFGDLQQFEHVGLWGWLAIAAGILWLAAAVGLWALQPWAWAFAMVVAGISLFEAFILAISAFGTGLALAAGLLPLVIILYLNSRDVKRAFGLMDTTSQM*
Ga0150985_10490697213300012212Avena Fatua RhizosphereVRNPPILISVIGFFGAMAGFAWLFFGLRMIGFDWFGIFGDLPAFEHVGLWGWLAIAAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGLVDDPADVYPPGA*
Ga0150985_10515958823300012212Avena Fatua RhizosphereVKNPPILISVIGFFAALAGFAFLFIGLRLLGFDWFGLFGDVQKFEQTGLWGWLAIGAGILWLAAAVGLWALQPWAWAFGMVIAGISLFEAFLWFLEFPGSGIGFAAALMPLVMILYLNSRSVKAAFGLMDAPNEAYVER*
Ga0150985_10588365813300012212Avena Fatua RhizosphereVLVSVLGFFGAMAGFGWLFVGLRMIGFDWFGLFGDLQQFEHVGLWGWLAILAGILWLAAAVGLWALQPWAWAFAMVVAGISLFEAFILAISAFGTGLALAAGLLPLVIILYLNSRDVKRSFGLMDPPSNS*
Ga0150985_10619125413300012212Avena Fatua RhizosphereMAGFGWLFVGLRMIGFDWFGLFGDLQQFEHVGLWGWLAIIAGILWLAAAVGLWALQPWAWAFAMVVAGISLFEAFILAISTFGTGLALAAGLLPLVIILYLNSRDVKRSFGLMDPPSNS*
Ga0150985_10856278613300012212Avena Fatua RhizosphereVRNPPVLISVIGFFAAMAGFGWLFVGLRMIGFDWFGLFGDLQQFESVGLWGWLAIAAGILWLAAAVGMWALQPWAWAFAMVVAGISLFEAFILAISAFGTGLALAAGLLPLVIILYLNSRDVKRAFGLMEPPSNSAM*
Ga0150985_10988710633300012212Avena Fatua RhizosphereVRNPPILISVIGFFGAIAGFAWLFFGLRLLGFDWFGAFGDLPQFEHVGLWGWLAIAAGILWLAAAFGLWALQPWAWGFAMGVAGISLFEAALLMFSYFGTGIGFAAGLLPLVMILYLNSREVKRAFGLMEPPPPPMS*
Ga0150985_11507912323300012212Avena Fatua RhizosphereVRNPPILISVIGFFGAMAGFAFLFFGLRLLGFDWFGIFGDLPQYEHVGLWGWLAIAAGVLWLAAALGLWALQPWAWAFSMVIAGISLFEAALLMFQFFGTGIGFAAGLLPLVMILYLNSRAVKAAFGLSDPPMPTA*
Ga0137370_1020504723300012285Vadose Zone SoilGQCDRRSLIARQRHERERSSNKVRNPPILISVIGFFGAMAGFAWLFLGLRLIGFDWFGIFGDLPQLERVGIWGWLAILAGVLWLAAALGLWALQPWSWAFAMVIAGISLFEATILFFQFPGSGIAFAAGLLPLVMILYLNSREVKRAFGMTEITEPPASM*
Ga0150984_10417856413300012469Avena Fatua RhizosphereVRNPPVLISVIGFFAAMAGFGWLFVGLRMIGFDWFGLFGDLQQFESVGLWGWLAIAAGILWLAAAVGMWALQPWAWAFAMVVAGISLFEAFILAISAFGTGLALAAGLLPLVIILYLNSRDVKRAFGL
Ga0150984_10632060913300012469Avena Fatua RhizosphereVRNPPILISVIGFFGAMAGFAWLFFGLRMIGFDWFGIFGDLPAFEHVGLWGWLAIAAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGLVDDPADVYTPAA*
Ga0150984_11464210623300012469Avena Fatua RhizosphereVRNPPILISVIGFFGAMAGFAFLFFGLRLLGFDWFGIFGDLPQYEHVGLWGWLAIAAGVLWLAAALGLWALQPWAWAFSMVIAGISLFEAALLMFQFFGTGIGFAAGLLPLVMILYLNSRAVKAAFALSDPPMPSA*
Ga0157292_1001055513300012900SoilMRNPPVLISVIGFFAAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILAGVLWLAAAAGLWALQPSAWVFAMVVAGLSLFEAFILLIQYPGSGLGFAASLMPLLII
Ga0157283_1007655233300012907SoilMRNPPVLISVIGFFAAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFIQYPGSGLGFAASLMPLLIIFYLNSR
Ga0075308_109428413300014264Natural And Restored WetlandsVKNPPILISIIGFFAALAGLAWIVIGLRMLGFDWFGLLGDLQRFEQTGLWGWLAIIVGVLWLAAGLGLWALQPWAWAFAVVVAAISLFEAFLWMLEYFGSGIGFAAALLPL
Ga0075359_101356223300014266Natural And Restored WetlandsMKNPPVLVSVLGFFVAMAGFAWLFLGLRLLGFDWFGALGDLPALEHVGIWGWLAIGAGILWLLVAIGLWAMQPWAWMATMIVAGLAIFEAFLYMLSFPGSGLGLGMMILPGIIILYMNSRDVKAQFLGDPTAA*
Ga0075313_105031823300014267Natural And Restored WetlandsMRNPPILISVIGFFGLLTGLTWLFLGLRILGFDWFTALGDVGDFEQSGLWGWLAIIASVLWIAAAAGLWTLQPWARTFAMIVAGLALFEAFLWFLEYPGSGLGLGMSLLPLVILLYLNSSDVKAAFGGEEAPPPLS*
Ga0075304_114135323300014307Natural And Restored WetlandsMKNPPILISVIGFFAAIAGFSWLFLGLRILGFDWFGALGDLEAFEQAGLWGWLAILGGLLWLAAAFGLWTTRPWAWMLAMIVAGIALFEAFLWMLEYPGSGLGLGMSLLPIVI
Ga0075348_109840113300014319Natural And Restored WetlandsMEGAHNMKNPPILISVIGFFAALAGFAWIFFGLRLLGFDWFTFLGDLEAFESSGIWGWLAILGGVLWLAAALGLWSLQPWAWMFGMIVAGVALFEAILYMLSYPGTGLGLGMSIMP
Ga0173480_1123231013300015200SoilMRNPPVLISVIGFFAAIAGFALLFAGLRFLGFDWFGIFGDLPRFESTGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILMLQFPGSGIGFAAALMPLLII
Ga0173478_1054125913300015201SoilGFALLFAGLRFLGFDWFGIFGDLPRFESTGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILMLQFPGSGIGFAAALMPLLIIAYLNSRAVKASFMLSDGPPGPDMDPM*
Ga0180073_102306723300015256SoilMKNPPILISVIGFFAALAGFAWLFLGLRILGFDWFTVLGDVGQLEQSGLWALQPWAWLFAMIVAGISLFEAFLWMLEYPGSGLGLGMSIMPLLIILYLNGSAVKAAFGMKDPPPAA*
Ga0132258_1174142223300015371Arabidopsis RhizosphereVRNPPILISVLGFFAALAGFAMLFTGLRMLGFDWFGLLGDVPKYENVGIWGWLALIAGIAWLAAALGLWALQPWAWVFAVVVAGFSLFEAFLLMLDYFGTGLGFASALLPLVLLWYLNTAPVKEAFGLVPSARISDTE*
Ga0190274_1122563313300018476SoilYMRNPPVLISVIGFFAAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFIQYPGSGLGFAASLMPLLIIFYLNSRYVKASFGLSDGQMGPDITE
Ga0190271_1379751513300018481SoilGFAMLFLGLRMLGFDWFGIYGDLPRFEGVGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFIQFPGTGLGFAASLMPLIIILYLNSRAVKASFGLLEGANDPDM
Ga0180116_111993813300019229Groundwater SedimentMKNPPILISVIGFFAALAGFAWLFLGLRILGFDWFTVLGDVGQLEQSGLWGWLAIGAGILWLLVAVGLWALQPWAWLFAMIVAGISLFEAFLWMLEYPGSGLGLGMSIMPLLIILYLNGSAVKAAFGMKDQPPAA
Ga0180112_119569723300019238Groundwater SedimentVRNPPILISVLGFFGALAGFAWLFVGLRILGFDWFGALGDLPQFEQTGLWGWLAIAGGILWLAAAFGLWALQPWAWAFAMILAGLSLFEAFLWFLEFPGSGIGFGAAILPLVMLLYLNSRDVKRAFGLLEGQQLE
Ga0180115_107719113300019257Groundwater SedimentVRNPPILISVLGFFGALAGFAWLFVGLRILGFDWFGALGDLPQFEQTGLWGWLAIAGGILWLAAAFGLWALQPWAWAFAMILAGLSLFEAFLWFLEFPGSGIGFGAAILPLVMLLYLNSRDVKRAFGLLEG
Ga0184647_101641813300019263Groundwater SedimentMRNPPVLVSVIGFFGAIAGFALLFLGLRMLGFDWFGIFGDLPRFESVGFWGWLLIIAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFIQFPGSGLGFAAALMPLIIILYLNSRAVKASFGLLEGAPDPDMA
Ga0184647_125196513300019263Groundwater SedimentVRNPPILISVIGFFAALAGFAFLFIGLRLLGFDWFGLFGDVQKFEQTGLWGWLAIGAGILWLAAAVGLWALQPWAWAFSIVIAGISLFEAFLWFLEFPGTGIGFGAALMPLVMILYLNSRAVKAAFGLLDPVNDTYVER
Ga0184647_149758713300019263Groundwater SedimentARSEMTRPSPGPSDRKGPAMRNPPILVSVIGFFAALAGFGNLFFGFRVLGFDWFGILGQLPKYESVGLWGWWAILVGLAWLAVAGGLWALQPWARAFAMIVAGISLFEAVIAFFQYPGSGVGLAMGLLPLVILFYLNSRDVKEAFGEAASSDSSI
Ga0173479_1055695113300019362SoilGKGYMRNPPVLISVIGFFAAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFIQYPGSGLGFAASLMPLLIIFYLNSRYVKASFGLSDGQMGPDITE
Ga0180109_111403813300020067Groundwater SedimentMKNPPILISVIGFFAALAGFAWLFLGLRILGFDWFTVLGDVGTFEQSGLWGWLAIGAGILWILVAVGLWALQPWAWLFAMIVAGISLFEAFLWMLEYPGSGLGLGMSIMPLLIILYLNGSAVKAAFGMKDPPPAA
Ga0224500_1001467633300022213SedimentMKNPPILVSVIGFFAALAGLAWIFLGLRVIGFDWFGVLGDVQAFEMASIWGWLAVGGGILWLAGALGLWAMQPWAWLLTIVVAGITLFEAFLWMIEFPGTGIGLGMSIMPLLIILYMNSASVKAAFGLTDPPPTM
Ga0210060_106157813300025554Natural And Restored WetlandsVKNPPILISIIGFFAALAGLAWIVIGLRMLGFDWFGLLGDLQRFEQTGLWGWLAIIVGVLWLAAGLGLWALQPWAWAFAVVVAAISLFEAFLWMLEYFGSGIGFAAALLPLVILFYLNSASVKKAFGLDRDMM
Ga0209745_110789023300025739Arctic Peat SoilVKNPPILVSVIGFFGALAGFAWLFIGLRLLGFDWFGLLGDLQKFEQTGLWGWLAIGAGILWIAAAIGLWALQPWAWAFAMIVAGISLFEAFLWFLEFPGTGIGFASGLLPLVIILYLNSGSVKRAFMVDSNMDAS
Ga0209538_111222433300025846Arctic Peat SoilRGEESNKVKNPPILVSVIGFFGALAGFAWLFIGLRLLGFDWFGLLGDLQKFEQTGLWGWLAIGVGILWIAAAVGLWALQPWAWAFAMIVAGISLFEAFLWFLEYPGTGIGFASGLLPLVIILYLNSRSVKKAFMVDSGMDA
Ga0209540_1022528523300025888Arctic Peat SoilVKNPPILVSVIGFFGALAGFAWLFIGLRLLGFDWFGLLGDLQKFEQTGLWGWLAIGVGILWIAAAVGLWALQPWAWAFAMIVAGISLFEAFLWFLEYPGTGIGFASGLLPLVIILYLNSRSVKKAFMVDSGMDA
Ga0209450_1005820923300027885Freshwater Lake SedimentMRNPPILVSVLGFFAGLAGFAWIFLGLRILGFDWFTLLGDVGQYEQAGIWGWLAIGAGVLFVAAAVGLWSLQPWAWAFAMVVAGVALFEAFLWFLEFPGTGIGLGMSIMPLIIILYLNSRDVKAQFLGGPPAD
Ga0209254_1006460433300027897Freshwater Lake SedimentMRNPPILVSVLGFFAGLAGFAWIFLGLRILGFDWFTVLGDVGQYEQAGIWGWLAIGAGVLFVAAAVGLWSLQPWAWAFAMVVAGVALFEAFLWFLEFPGTGIGLGMSIMPLIIILYLNSRDVKAQFLGGPPAD
Ga0247749_101333323300027993SoilMRNPPVLISVIGFFAAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILAGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFIQYPGSGLGFAASLMPLLIIFYLNSRYVKASFGLSDGQMGPDITE
Ga0311347_1101721613300029923FenLVSVLGFFGALAGFAWIFFGLRLIGFDWFGIFGDLPQVEHIGIWGWLAVAAGILWLAAAVGLWALQPWAWAFAMVVAGISLLEAAILMFQSFGSGIGFAAGLLPLVIILYLNSRDVKRAFGLLPSAAE
Ga0311332_1041266713300029984FenVKNPPILVSVLGFFGAIAGFAWIFFGLRLIGFDWFGLFGDLPKLEHVGLWGWLAVAAGILWLAAAVGLWALRPWAWAFAMVIAGISLLEAFMLTITNFGTGIGLAAGLLPLVIILYLNSRDVKKAFGLVPSE
Ga0311336_1017792723300029990FenVKNPPILVSVLGFFGALAGFAWIFFGLRLIGFDWFGIFGDLPQVEHIGIWGWLAVAAGILWLAAAVGLWALQPWAWAFAMVVAGISLLEAAILMFQSFGSGIGFAAGLLPLVIILYLNSRDVKRAFGLLPSAAE
Ga0311333_1008401023300030114FenVKNPPILVSVLGFFGAIAGFAWIFFGLRLIGFDWFGIFGDLPQVEHIGIWGWLAVAAGILWLAAAVGLWALQPWAWAFAMVVAGISLLEAAILMFQSFGSGIGFAAGLLPLVIILYLNSRDVKRAFGLLPSAAE
Ga0311366_1067141313300030943FenLADRRSTNERRGVQTKVKNPPILVSVLGFFGALAGFAWIFFGLRLIGFDWFGIFGDLPQVEHIGIWGWLAVAAGILWLAAAVGLWALQPWAWAFAMVVAGISLLEAAILMFQSFGSGIGFAAGLLPLVIILYLNSRDVKRAFGLLPSAAE
Ga0308154_10998023300030986SoilVRNPPILISVLGFFGAMAGFAWLFIGLRMIGFDWFGIFGDLPAFERVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGLLDDPGVVYTPGT
Ga0308183_101352133300030988SoilVRNPPILISVIGFFGAMAGFAWLFFGLRMIGFDWFGIFGDLPTFEHVGLWGWLAIAAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFQFFGTGIGFAAGLLPLVIILYLNSASEAGVRSGQ
Ga0308183_110450423300030988SoilVRNPPILISVLGFFGAMAGFAWLFIGLRMIGFDWFGIFGDLPAFERVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGLLDDPGVVYTPG
Ga0308183_117311713300030988SoilVRNPPILVSVLGFFGAMAGFAWLFFGLRMIGFDWFGIFGDLPAFEHVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLFFSYPGTGIGFAAGLLPLVIILYLNSRSVKRAFGLLDDQADVYTPGA
Ga0308189_1031212723300031058SoilVRNPPVLISVIGFFAAMAGFGWLFVGMRMIGFDWFGLFGDLAQFESVGLWGWLAIAAGILWLAAAVGLWATQPWAWAFAMVVAVISLFESFILAISTFGSGLGLAAGLLP
Ga0308201_1020281923300031091SoilVRNPPILISVLGFFGAMAGFAWLFIGLRMIGFDWFGIFGDLPAFERVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGLLDDQADVYTPGA
Ga0308197_1045100123300031093SoilVRNPPILISVLGFFGAMAGFAWLFIGLRMIGFDWFGIFGDLPAFERVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGLLDD
Ga0308181_111910923300031099SoilVRNPPILISVIGFFGAMAGFAWLFFGLRMIGFDWFGIFGDLPTFEHVGLWGWLAIAAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFQFFGTGIGFAAGLLPLVIILYLNSRQVKRAFGLDNDVTMVTD
Ga0308180_101793823300031100SoilVRNPPILISVLGFFGAMAGFAWLFIGLRMIGFDWFGIFGDLPAFERVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFSYFGSGIGFAAGLLPLVIILYLNSRSVKRAFGL
Ga0308180_102592413300031100SoilVRNPPILVSVLGFFGAMAGFAWLFFGLRMIGFDWFGIFGDLPAFEHVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLFFSYPGTGIGFAAGLLPLVIILYLNSRSVKRAFGLLDDPGVVYTPGT
Ga0308177_103162823300031423SoilVRNPPILISVLGFFGAMAGFAWLFIGLRMIGFDWFGIFGDLPAFERVGLWGWLAIGAGILWLAASLGLWSLQPWAWAFAMVVAGISLFEAALLMFQYFGTGIGFAAGLLPLVIILYLN
Ga0311351_1023528733300031722FenVSVLGFFGALAGFAWIFFGLRLIGFDWFGIFGDLPQVEHIGIWGWLAVAAGILWLAAAVGLWALQPWAWAFAMVVAGISLLEAAILMFQSFGSGIGFAAGLLPLVIILYLNSRDVKRAFGLLPSAAE
Ga0315288_1096485613300031772SedimentMKNPPILISVIGFFVALAGFAWLFLGLRVLGFDWFTILGDVGKFEQSGLWGWLAIGAGILWLMVAVGLWAMQPWAWLSGMIVAGISLFEAFLWMLEYPGSGIGLGMSIMPIIIILYLNSAGVKAAFGMKEPPPAA
Ga0315297_1022213823300031873SedimentMKNPPILISVIGFFAALAGFAWMFLGLRILGFDWFTLLGDVGQFEQSGLWGWLAIGAGILWILVAVGLWSLQPWAWLFAMIVAGISLFEAFLWMLEYPGSGLGLGMSIMPLLIILYLNGSAVKAAFGMKDPPPAA
Ga0315278_1004617323300031997SedimentMKNPPILISVIGFFVALAGFAWLFLGLRILGFDWFTLLGDVGQFEQSGLWGWLAIGAGILWILVAVGLWSLQPWAWLFAMIVAGISLFEAFLWMLEYPGSGLGLGMSIMPLLIILYLNGSAVKAAFGMKDPPPAA
Ga0310902_1113989623300032012SoilMRNPPVLISVIGFFGAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILSGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFFQYPGSGLGLGASLMPLLIIFYLNSRYVKA
Ga0315272_1073841313300032018SedimentNHHTEGDTRMKNPPILISVIGFFAALAGFAWMFLGFRILGFDWFTLLGDVEKFEQSGLWGWLAIGAGILWILVAIGLWALQPWAWLFAMIVAGISLFEAFLWMLEYPGSGLGLGMSIMPLLILLYLNGASVKAAFGMKDPPPAA
Ga0310890_1121119313300032075SoilEYMRNPPVLISVIGFFGAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILSGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFFQYPGSGLGLGASLMPLLIIFYLNSRYVKASFGLGDLPAGVDE
Ga0315292_1045968013300032143SedimentTEGDTSMKNPPILISVIGFFVALAGFAWLFLGLRVLGFDWFTILGDVGKFEQSGLWGWLAIGAGILWLMVAVGLWAMQPWAWLTGMIVAGISLFEAFLWMLEYPGSGIGLGMSIMPIIIILYLNSAGVKAAFGMKEPPPAA
Ga0315295_1019607813300032156SedimentMKNPPILISVIGFFVALAGFAWLFLGLRVLGFDWFTILGDVGKFEQSGLWGWLAIGAGILWLLVAVGLWAMQPWAWLTGMLVAGISLFEAFLWMLEYPGSGIGLGMSIMPIIIILYLNSAGVKAAFGMKDPPPAA
Ga0315268_1001159343300032173SedimentMKNPPILISVIGFFAALAGFAWLLLGLRILGFDWFTVLGDVGQFEQSGLWGWLAIGAGILWILVAVGLWALQPWAWLFAMIVAGISLFEAFLWMLEYPGSGLGLGMSIMPLLIILYLNGSAVKAAFGMKDPPPAA
Ga0310896_1043678413300032211SoilMRNPPVLISVIGFFGAIAGFAMLFAGLRFLGFDWFGIFGDLPQFESAGFWGWLLILSGVLWLAAAAGLWALQPWAWVFAMVVAGLSLFEAFILFFQYPGSGLGLGASLMPLLIIFYLNSRYVKASFGLGDLPAGVDE
Ga0315271_1006086433300032256SedimentMKNPPVLVSVIGFFAALAGFAWLFLGLRLIGFDWFGVLGDLPAFESAALWGWLAVAGGILWLLAALGLWAMQPWAWMAAMIIAGIAVFEAFLYMLAYSGSGLGLGMMIMPGIIILYLNSKDVKVAFGLADPAPQA
Ga0315270_1021256613300032275SedimentMKNPPVLVSVIGFFAALAGFAWLFLGLRLIGFDWFGVLGDLPAFESAALWGWLAVAGGILWLLAALGLWAMQPWAWMAAMIIAGIAVFEAFLYMLAYSGSGLGLGMMIMPGIIILYMNSK
Ga0315270_1021819533300032275SedimentMKNPPILISVIGFFAALAGFAWMFLGFRILGFDWFTLLGDVGKFEQSGLWGWLAIGAGILWILVAVGLWALQPWAWLFAMIVAGISLFEAFLWMLEYPGTGLGLGMSIMPLLILLYLNGASVKAAFGMKDPPPAA
Ga0315275_1044456533300032401SedimentMVRDALRRNNGTEGDTSMKNPPILISVIGFFVALAGFAWLFLGLRVLGFDWFTILGDVGKFEQSGLWGWLAIGAGILWLMVAVGLWAMQPWAWLTGMIVAGISLFEAFLWMLEYPGSGIGLGMSIMPIIIILYLNSAGVKAAF
Ga0315275_1164179823300032401SedimentRMKNPPILISVIGFFVALAGFAWLFLGLRVLGFDWFTILGDVGKFEQSGLWGWLAIGAGILWLLVAVGLWAMQPWAWLTGMLVAGISLFEAFLWMLEYPGSGIGLGMSIMPIIIILYLNSAGVKAAFGMKDPPPAA
Ga0316622_10205887513300033416SoilMKNPPILVSIIGFFGVLAGLGWLVLGLRILGFDWFTVLGDVGDFEQSGLWGWLAIGAGILWLLVAVGLWAMQPWGWLTGMIVAGISLFEAFLWMLEYPGSGIGLGMSIMPIIIILYLNSASVKAAFGMKDPPPAA
Ga0316625_10178061713300033418SoilGFAWLFLGLRILGFDWFTVLGDVGKYEQSGLWGWLAIGAGILWILVAVGLWALQPWAWLFAMIVAGISLFEAFLWMLEYPGTGLGLGMSIMPLLIILYLNSAGVKAAFAMKDPPPAA
Ga0316601_10224770313300033419SoilMKNPPVLVSVIGFFAALAGFANLFAGLRILGFDWFTVLGDVGTFEQSGLWGWLAIGIGVVWILVAVGLWALQPWAWVTAMVVAGISLFEAFLWFLEYPGSGLGFGMAIMPIIILLYLNSAGVKAAFGMKDPPPAA
Ga0316613_1069057913300033434SoilMKNPPILISVIGFFAALAGFANLFAGLRILGFDWFTVLGDVGTFEQSGLWGWLAIGIGVVWILVAVGLWALQPWAWVTAMVVAGISLFEAFLWFLEYPGSGLGFGMAIMPIIILLYLNSAGVKAAFGMK
Ga0316616_10273086023300033521SoilMKNPPVLVSVIGFFAALAGFANLFAGLRILGFDWFTVLGDVGTFEQSGLWGWLAIGIGVVWILVAVGLWALQPWAWVTAMVVAGISLFEAFLWFLEYPGSGLGFGMAIMPIIILLYLNSAGVKAAF
Ga0373899_040069_12_4163300034077Sediment SlurryMRNPPVLVSVLGFFAALAGFAWLFLGLRILGFDWFGVFGDLPAFESAGLWGWLAIGGGILWLLTAFGLWAMQPWAWMVAMIVADISLFEAFLWAFSYPGSGIGLSMGLLPLVIIWYLNSRDIKSQFGMTEPPQS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.