Metagenome / Metatranscriptome Family F100338

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100338
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	MEKSLRYRVNVSTSVKGVKTWDCTVDGDNMEMEEVLKRSDELVAELERRYPPQIEGK
Number of Associated Samples	35
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.12 %
% of genes near scaffold ends (potentially truncated)	7.84 %
% of genes from short scaffolds (< 2000 bps)	73.53 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.725 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater (38.235 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (73.529 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.18% β-sheet: 23.53% Coil/Unstructured: 55.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00436	SSB	12.75
PF13392	HNH_3	2.94
PF09643	YopX	2.94
PF01381	HTH_3	2.94
PF04404	ERF	2.94
PF05063	MT-A70	2.94
PF00805	Pentapeptide	1.96
PF04002	RadC	0.98
PF03592	Terminase_2	0.98
PF09811	Yae1_N	0.98
PF03837	RecT	0.98
PF00075	RNase_H	0.98
PF13715	CarbopepD_reg_2	0.98
PF02650	HTH_WhiA	0.98
PF02195	ParBc	0.98
PF12728	HTH_17	0.98
PF03237	Terminase_6N	0.98
PF01870	Hjc	0.98
PF00149	Metallophos	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	12.75
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	12.75
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	5.88
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.96
COG1481	DNA-binding transcriptional regulator WhiA, involved in cell division	Transcription [K]	0.98
COG1591	Holliday junction resolvase Hjc, archaeal type	Replication, recombination and repair [L]	0.98
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.98
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	0.98
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
All Organisms	root	All Organisms	36.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Viruses	superkingdom	All Organisms → Viruses	23.53 %
cellular organisms	root	All Organisms → cellular organisms	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.76 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.86 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.88 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	3.92 %
Candidatus Methanofastidiosa	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa	0.98 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.98 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales	2.94 %
Candidatus Methanofastidiosum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.98 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae	2.94 %
unclassified Methanofastidiosum	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum	0.98 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.98 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	2.94 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Candidatus Methanofastidiosum sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	0.98 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoides mccartyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	2.94 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Candidatus Methanofastidiosum sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	0.98 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.53 %
Dehalococcoides mccartyi CG1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi → Dehalococcoides mccartyi CG1	0.98 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.98 %
Candidatus Methanofastidiosum sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	0.98 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.98 %
Chloroflexi bacterium RBG_13_48_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001335\|ML8_10004929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	17319	Open in IMG/M
3300003690\|PicViral_1001075	Not Available	10496	Open in IMG/M
3300005253\|Ga0073583_1035327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	11423	Open in IMG/M
3300005253\|Ga0073583_1045087	Not Available	534	Open in IMG/M
3300005253\|Ga0073583_1078538	Not Available	789	Open in IMG/M
3300005253\|Ga0073583_1138059	Not Available	1171	Open in IMG/M
3300005253\|Ga0073583_1246145	All Organisms → Viruses → Predicted Viral	3849	Open in IMG/M
3300005782\|Ga0079367_1100196	Not Available	1177	Open in IMG/M
3300008255\|Ga0100403_1082716	All Organisms → Viruses → Predicted Viral	1285	Open in IMG/M
3300008255\|Ga0100403_1135612	Not Available	919	Open in IMG/M
3300008517\|Ga0111034_1170431	Not Available	3171	Open in IMG/M
3300008517\|Ga0111034_1283996	Not Available	1653	Open in IMG/M
3300009285\|Ga0103680_10000747	Not Available	35083	Open in IMG/M
3300009285\|Ga0103680_10014353	Not Available	5532	Open in IMG/M
3300009285\|Ga0103680_10106505	Not Available	1542	Open in IMG/M
3300009285\|Ga0103680_10121561	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300009414\|Ga0114909_1151579	Not Available	613	Open in IMG/M
3300009488\|Ga0114925_10349814	Not Available	1012	Open in IMG/M
3300009488\|Ga0114925_10965292	Not Available	618	Open in IMG/M
3300009488\|Ga0114925_11492335	Not Available	502	Open in IMG/M
3300009529\|Ga0114919_10516518	Not Available	823	Open in IMG/M
3300009529\|Ga0114919_10850600	Not Available	617	Open in IMG/M
3300009604\|Ga0114901_1177383	Not Available	628	Open in IMG/M
3300011118\|Ga0114922_11733493	Not Available	500	Open in IMG/M
3300012964\|Ga0153916_10365448	Not Available	1495	Open in IMG/M
3300012964\|Ga0153916_10716291	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
(restricted) 3300013122\|Ga0172374_1023132	All Organisms → Viruses → Predicted Viral	2829	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10045577	All Organisms → Viruses → Predicted Viral	3225	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10776572	Not Available	597	Open in IMG/M
3300014148\|Ga0180010_1006419	Not Available	1050	Open in IMG/M
3300014203\|Ga0172378_11249347	Not Available	524	Open in IMG/M
3300014204\|Ga0172381_10099719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	2410	Open in IMG/M
3300014204\|Ga0172381_10179230	Not Available	1720	Open in IMG/M
3300014204\|Ga0172381_10226313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	1502	Open in IMG/M
3300014204\|Ga0172381_10262823	All Organisms → Viruses → Predicted Viral	1376	Open in IMG/M
3300014204\|Ga0172381_10417206	All Organisms → Viruses → Predicted Viral	1048	Open in IMG/M
3300014204\|Ga0172381_10499808	Not Available	940	Open in IMG/M
3300014204\|Ga0172381_10804055	Not Available	705	Open in IMG/M
3300014205\|Ga0172380_10012241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	8711	Open in IMG/M
3300014205\|Ga0172380_10093951	All Organisms → Viruses → Predicted Viral	2441	Open in IMG/M
3300014205\|Ga0172380_10150388	All Organisms → Viruses → Predicted Viral	1852	Open in IMG/M
3300014205\|Ga0172380_10376154	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300014205\|Ga0172380_11077347	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300014205\|Ga0172380_11273141	Not Available	514	Open in IMG/M
3300014205\|Ga0172380_11290765	Not Available	510	Open in IMG/M
3300014613\|Ga0180008_1004156	All Organisms → cellular organisms → Bacteria	7045	Open in IMG/M
3300014613\|Ga0180008_1004507	Not Available	6658	Open in IMG/M
3300014613\|Ga0180008_1007111	Not Available	5013	Open in IMG/M
3300014613\|Ga0180008_1044909	Not Available	1773	Open in IMG/M
3300014613\|Ga0180008_1059851	Not Available	1515	Open in IMG/M
3300014613\|Ga0180008_1060993	All Organisms → Viruses → Predicted Viral	1498	Open in IMG/M
3300014613\|Ga0180008_1065265	Not Available	1444	Open in IMG/M
3300014613\|Ga0180008_1100427	All Organisms → Viruses → Predicted Viral	1133	Open in IMG/M
3300014613\|Ga0180008_1102440	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300014613\|Ga0180008_1154191	Not Available	890	Open in IMG/M
3300014613\|Ga0180008_1176890	Not Available	823	Open in IMG/M
3300014613\|Ga0180008_1303328	Not Available	605	Open in IMG/M
3300014613\|Ga0180008_1347613	Not Available	561	Open in IMG/M
3300014613\|Ga0180008_1414285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	508	Open in IMG/M
3300014656\|Ga0180007_10015078	Not Available	6490	Open in IMG/M
3300014656\|Ga0180007_10033454	All Organisms → Viruses → Predicted Viral	3879	Open in IMG/M
3300014656\|Ga0180007_10041725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_48_17	3369	Open in IMG/M
3300014656\|Ga0180007_10048197	All Organisms → Viruses → Predicted Viral	3073	Open in IMG/M
3300014656\|Ga0180007_10054841	All Organisms → Viruses → Predicted Viral	2834	Open in IMG/M
3300014656\|Ga0180007_10116833	All Organisms → Viruses → Predicted Viral	1763	Open in IMG/M
3300014656\|Ga0180007_10166186	All Organisms → Viruses → Predicted Viral	1422	Open in IMG/M
3300014656\|Ga0180007_10188945	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300014656\|Ga0180007_10190616	All Organisms → Viruses → Predicted Viral	1309	Open in IMG/M
3300014656\|Ga0180007_10292603	Not Available	1009	Open in IMG/M
3300014656\|Ga0180007_10309813	Not Available	975	Open in IMG/M
3300014656\|Ga0180007_10346458	Not Available	911	Open in IMG/M
3300014656\|Ga0180007_10429439	Not Available	801	Open in IMG/M
3300014656\|Ga0180007_10553253	Not Available	689	Open in IMG/M
3300014656\|Ga0180007_10633113	Not Available	637	Open in IMG/M
3300014656\|Ga0180007_10687562	Not Available	607	Open in IMG/M
3300014656\|Ga0180007_10819124	Not Available	549	Open in IMG/M
3300014656\|Ga0180007_10823344	Not Available	547	Open in IMG/M
3300014656\|Ga0180007_10857860	Not Available	534	Open in IMG/M
3300015370\|Ga0180009_10031561	Not Available	3793	Open in IMG/M
3300017963\|Ga0180437_10370448	Not Available	1074	Open in IMG/M
3300020171\|Ga0180732_1020771	Not Available	2412	Open in IMG/M
3300020171\|Ga0180732_1024253	Not Available	2183	Open in IMG/M
3300020171\|Ga0180732_1034736	All Organisms → Viruses → Predicted Viral	1739	Open in IMG/M
3300020171\|Ga0180732_1203126	Not Available	591	Open in IMG/M
3300020814\|Ga0214088_1250158	Not Available	1312	Open in IMG/M
3300020814\|Ga0214088_1704778	All Organisms → Viruses → Predicted Viral	1605	Open in IMG/M
3300022553\|Ga0212124_10664776	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → Candidatus Methanofastidiosum → unclassified Methanofastidiosum → Candidatus Methanofastidiosum sp.	538	Open in IMG/M
3300025122\|Ga0209434_1134046	Not Available	683	Open in IMG/M
3300025327\|Ga0209751_11339299	Not Available	511	Open in IMG/M
3300027901\|Ga0209427_10651103	Not Available	768	Open in IMG/M
3300028299\|Ga0268276_1006457	Not Available	7308	Open in IMG/M
3300028603\|Ga0265293_10034810	Not Available	5091	Open in IMG/M
3300028603\|Ga0265293_10776876	Not Available	502	Open in IMG/M
3300029288\|Ga0265297_10099597	All Organisms → Viruses → Predicted Viral	2322	Open in IMG/M
3300029288\|Ga0265297_10210726	All Organisms → Viruses → Predicted Viral	1414	Open in IMG/M
3300029288\|Ga0265297_10304108	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300029288\|Ga0265297_10472318	Not Available	825	Open in IMG/M
3300029288\|Ga0265297_10556514	Not Available	739	Open in IMG/M
3300029799\|Ga0311022_12799681	Not Available	2283	Open in IMG/M
3300031227\|Ga0307928_10210013	Not Available	1028	Open in IMG/M
3300031539\|Ga0307380_10790002	Not Available	786	Open in IMG/M
3300031539\|Ga0307380_11186727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi → Dehalococcoides mccartyi CG1	593	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.47%
Engineered	Engineered	23.53%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	73.53%
Solid Waste	Engineered → Solid Waste	20.59%
Terrestrial	Environmental → Terrestrial	2.94%
Bioreactor	Engineered → Bioreactor	2.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	50.98%
Landfill	Engineered → Solid Waste → Landfill	20.59%
Marine	Environmental → Aquatic → Marine	19.61%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.94%
Soil	Environmental → Terrestrial → Soil	2.94%
Anaerobic	Engineered → Bioreactor → Anaerobic	2.94%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	41.18%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	20.59%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.71%
Lake	Environmental → Aquatic → Freshwater → Lake	3.92%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	3.92%
Coastal	Environmental → Aquatic → Marine → Coastal	2.94%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	2.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.96%
Clay	Environmental → Terrestrial → Soil → Clay	1.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.98%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	41.18%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	20.59%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	11.76%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	3.92%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.94%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.94%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.98%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	38.24%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	20.59%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	5.88%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	5.88%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	3.92%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.96%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.96%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	1.96%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.96%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.96%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.96%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.98%
Wetlands Benthic	Environmental → Aquatic → Marine → Wetlands → Unclassified → Wetlands Benthic	0.98%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.98%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.98%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001335	Wetlands benthic microbial communities from British Columbia, Canada - ML8	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300005253	Marine sediment microbial community near Loki's castle	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300008255	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t	Environmental	Open in IMG/M
3300008517	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4	Environmental	Open in IMG/M
3300009285	Microbial communities from groundwater in Rifle, Colorado, USA - 2A_0.1um	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013122 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10.3m	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300014148	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PW_MetaG	Environmental	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014613	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PW_MetaG	Environmental	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300020171	Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_0.1 MetaG	Environmental	Open in IMG/M
3300020814	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit	Engineered	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300028299	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_45m	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300029799	Metagenomes from anaerobic digester of solid waste, Toronto, Canda. Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119	Engineered	Open in IMG/M
3300031227	Saline water microbial communities from Ace Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ML8_1000492914	3300001335	Wetlands Benthic	MPQMERIVRYRVNVSTTVKGVKTFDCTVDMQGFTMDEVLAESDKLVAELERRYPATTEK*
PicViral_100107513	3300003690	Marine, Hydrothermal Vent Plume	VTLNEESVERSLRHRINISISAKGLRTWDCTTDGTGYTMEEILERSDALVQALELRYPAQV*
Ga0073583_103532717	3300005253	Marine Sediment	MEVTKSLRYRVNVSTSVKGIKTWDCTVDGTGYEMEEVVAESDKLVALLDSRYPAPLDSK*
Ga0073583_10450872	3300005253	Marine Sediment	MEENKSLRYRVNVSTSVKGIKTWDCTVDGLNLPMDEVLAESDKLVKALQERYPAPTE*
Ga0073583_10785381	3300005253	Marine Sediment	MEVTKSLRYRVNVSTSVKGIKTWECTVDGVGYDMDVVLDESDKLVAELEIRYHVLEVK*
Ga0073583_11380592	3300005253	Marine Sediment	MEDERSLRYRVNVSTSVKGIKTWDCTVDGTGYNKERILAESDLMVAELEKRYPFSVEEKK
Ga0073583_124614510	3300005253	Marine Sediment	MEVNKSLRYRVNVSTSVKGVKTWECTVDGEGYDMGYVLSESDALVAVLERRYPAPLEGK*
Ga0079367_11001963	3300005782	Marine Sediment	MSEEKSIRYRVNVTISTKGVKTWDCTVDGTNYTQEEVLIESDKLVAQLEQRYPVTEV*
Ga0100403_10827163	3300008255	Aquifer	METKMRYRVNISTSVKGVKTWDCTVDGEGWTQEHILEESDKLVKALEMRYPMKEEGR*
Ga0100403_11356122	3300008255	Aquifer	MEIEKSLRYRINISTSVKGVKTFDCTVDGLGFSMEEVLAESDKLVTELQKRYPIEVEAK*
Ga0111034_11704317	3300008517	Marine Sediment	MERSLRYRVNVSISVKGIKTWDCTVDGTEYSKEEILTESDLLVAELEKRYPTSIEEKK*
Ga0111034_12839964	3300008517	Marine Sediment	MEEERSLRYRVNVSTSVKGVRTWDCTVDGTGFSKGRILAESDLLVGELEKRYPFIVEEKK
Ga0103680_1000074745	3300009285	Groundwater	VQVSTSVKGIKTWECTVDGEGFDQKEILARSDSLVEALERRYPIPVIERAEVRREHDG*
Ga0103680_100143536	3300009285	Groundwater	VEQSLRYRVNISTSVKGVKTWEATVDGSGFTEAEILAFSDSLVAQLERRYPPAVDGSKP*
Ga0103680_101065051	3300009285	Groundwater	MEVTKSLRYRVNVSTKVKGVKTWDCTVDGEGLEMEQILTLSDTLVGQLEKRYPIIAETK*
Ga0103680_101215612	3300009285	Groundwater	MEITKSLRYRVNVSTSVKGVKTWDCTVDGEGLEMEQVLTLSDSLVLQLEKRYPIIAETK*
Ga0114909_11515792	3300009414	Deep Ocean	LIAKGSVMEERALRRRVNVATSVKGVKTWDCTVDGTGYTEEEILEFSDNLVSRLEERYPAPTE*
Ga0114925_103498141	3300009488	Deep Subsurface	MMAEKSLRYRVNIATSTKGVKTWECTVDGEGYEMDEVLAKSDELVKKLETRYPAPLQE*
Ga0114925_109652922	3300009488	Deep Subsurface	MMAEKSLRYRVNISTSVKGIKTWECTVDGEGYEMDEILTKSDELVKKLEERYPAPLQE*
Ga0114925_114923352	3300009488	Deep Subsurface	RVTLEETKSLRYRVNVSISVKAVTTWDCTVDGTGFSQEEILAESDKLVAELEKRYPIKVE
Ga0114919_105165182	3300009529	Deep Subsurface	MIEQSLRYRVNVSVSVKGVKTWDCTVDGLGYEMDEVLNKSAELVGKLELKYPLDIQEK*
Ga0114919_108506002	3300009529	Deep Subsurface	MSEKSLRYRVNVSTSVKGVKTWECTVDGEGYEMDEVLAKSDELVAKLEERYPIQIEKAS*
Ga0114901_11773831	3300009604	Deep Ocean	MSEERRLRYRVNVSISVKGIKTWDCTVDGEGFSMEEILTESDKLVIELGDRYPIQGGD*
Ga0114922_117334931	3300011118	Deep Subsurface	MVEKSLRYRVNVSTSVKGVKTWECTVDGEGYEMDEVLAKSDELVAKLEQRYPIQVEK*
Ga0153916_103654482	3300012964	Freshwater Wetlands	MAEQTRSLRYRVNVSTSVKGVKTWDCTVDGEGYDMDEVLAKSDQLVKKLEDRYPIQITP*
Ga0153916_107162914	3300012964	Freshwater Wetlands	MIEKSIRYRVNVSISTKGQKTWDCTCDAVGMTMGEALTHSDKLVAELEKRYPA
(restricted) Ga0172374_10231322	3300013122	Freshwater	MVEVNKSIRYRVNVSTSVKGVKTWDATVDGDNFTMDEVLGESDKLVKELERRYPPQIDVK
(restricted) Ga0172363_100455776	3300013130	Sediment	MAEIEKSIRYRVNVSISVKGVKTWDCTVDGLNMSKEEVLTESDLLVKALESRYPIKTEG*
(restricted) Ga0172363_107765721	3300013130	Sediment	MEELMDKSLRYRVNVSISVKGVKTWECTVDGDNLFMEEILAESDKLVKELEKRYPISEVLKNV*
Ga0180010_10064191	3300014148	Groundwater	ERRVVMDKSLRYRVNVSTSVKGIKTWDCTVDGEGYTMEEVLERSDILVNELEIRYPVKTE
Ga0172378_112493472	3300014203	Groundwater	MENSLRYRVNVETSVKGVKTFSCTVDGEGYTMEKILSESDKLVKELEKRYNISEVIK*
Ga0172381_100997191	3300014204	Landfill Leachate	MENSLRYRVNVETSVRGVKTFSCTVDGEGYTMEKILSESDKLVKELEKRYNISEVIK*
Ga0172381_101792305	3300014204	Landfill Leachate	MENEIRKEMRHRVNISTSVKGIKTWDCTVEGTGYTQDEVLAESDKLVARLEQRYPITMEGK*
Ga0172381_102263133	3300014204	Landfill Leachate	MEKSLRYRVNVSTSVKGVKTWDCTVDGDNMEMEEVLKRSDELVAELERRYPPQIEGK*
Ga0172381_102628234	3300014204	Landfill Leachate	MDKSLRYRVNVSISVKGQKTWDCTCDGENLSMEEVLAESDKLVAELEKRYPASIDTK*
Ga0172381_104172063	3300014204	Landfill Leachate	MEVEKSMRYRVNISTSVKGVKTFDCTVDGLGYSMEEVLTASDQLVNALEARYPIMEVLK*
Ga0172381_104998082	3300014204	Landfill Leachate	METSLRFRVNVSTSVKGVKTWDCTVDGENIPMDSILEMSDELVKKLENKYPISEVLK*
Ga0172381_108040552	3300014204	Landfill Leachate	MGEVQKSLRYRVNVSTSVKGVKTWDCTTDGEGYEMDEVLAKSDELVKKLEERYPAQIGT*
Ga0172380_100122419	3300014205	Landfill Leachate	MEVQKSVRYRVNISTSVKGVKTFDCTVEGENFTMGEVLAESDLLVKELEKRYPVSEVLK*
Ga0172380_100939513	3300014205	Landfill Leachate	MEVQTSLRYRVNVSTSVKGIKTFDCTVEGDGYEMSTVLELSDLLVKELEKRYPISEVLK*
Ga0172380_101503885	3300014205	Landfill Leachate	MEVEKSMRYRVNISTSVKGVKTWDCTVDGEGFSMSDILDASDKLVKSLEVRYPITEVLK*
Ga0172380_103761542	3300014205	Landfill Leachate	MDKSLRYRVNVSTSVKGIKTWDCTVDGDNMEMEEVLKRSDELVAELEKRYPLVLESK*
Ga0172380_110773471	3300014205	Landfill Leachate	MENEIKKEMRHRVNISTSVKGVKTWDCTVEGTGYTQDEVLAESDKLVDQLEQRYPITMEGK*
Ga0172380_112731412	3300014205	Landfill Leachate	MEKSLRYRVNVSISVKGQKTWDCTCDGENLSMEEILAESDKLVAELERRYPANIEVK*
Ga0172380_112907651	3300014205	Landfill Leachate	MEVQKSIRYRVNVSTSVKGIKTWDCTTEIENGTMDEVLMESDLLVQALEHRYPNTEVLK*
Ga0180008_100415612	3300014613	Groundwater	MEVEKSLRYRVNISTSVKGVKTWDCTVDGVGWTQEVILAESDSLVAQLEMRYPNTEVLK*
Ga0180008_100450710	3300014613	Groundwater	MMEEKSLRYRVNVSTSVKGVKTWDCTVDGENFEMDEVLGRSDELVKKLEARYPAPEA*
Ga0180008_10071117	3300014613	Groundwater	MEIQKSIRYRVNVSTSIKGVKTFDCTVDMENYPMDEVLAESDKLVKELEKRYPITEVMK*
Ga0180008_10449093	3300014613	Groundwater	MEVTKSMRYRVNVAISTKGQKTWDCTVDSTEYTMSDVLTASDALVKELEQRYPAPKEG*
Ga0180008_10598513	3300014613	Groundwater	MDKSMRYRVNVSTSVKGVKTWDCTVDGEGYAQSDILAASDMLVKELEKRYPISEVLKNG*
Ga0180008_10609933	3300014613	Groundwater	MEITKNLRYRVNVKILAKGNKTWDCTVDGENYTMEKVLIESDKLVKELEKRYPFSE*
Ga0180008_10652653	3300014613	Groundwater	MEVEKSMRYRVNISTSVKGVKTFDCTVDGQGFPMDVILAESDELVRELEKRYPITEVLK*
Ga0180008_11004272	3300014613	Groundwater	MEKSLRYRVNVSISVKGIKTWDCTVDGTEYTQEEVLAKSDVLVAQLEKRYPIVDEK*
Ga0180008_11024401	3300014613	Groundwater	METEKSIRFRVNVSISTKGQKTWDCTCDGVGYEMAEILTASDSLVAELSKRYPANIDGGK
Ga0180008_11541912	3300014613	Groundwater	MEEERSLRYRVNVSTSVKGVKTWDCTTEGTNYTQEEVLDKSDNLVKELEKRYPIKVE*
Ga0180008_11768902	3300014613	Groundwater	MAELETSIRYRVNVSTSVKGIKTFDCTVDMLNGSMEDVLRESDMLVTELEERYPPQIEEKK*
Ga0180008_13033282	3300014613	Groundwater	MNHDLPIAPPKAEIHKSIRYRVNVSTSVKGVKTWDCTVDGEGYSQDKILAESDKLVKELEKRYTINEVIK*
Ga0180008_13476131	3300014613	Groundwater	MEKSMRYRVNISTSVKGVKTWDCTVDGELSMEEILIESDKLVKELEKRYPISEVLK*
Ga0180008_14142852	3300014613	Groundwater	MEVEKSLRYRVNVSTSVKGVKTWDCTVDGQNWLMDDVLFASDELVKELEKRYPITEVIIK
Ga0180007_100150787	3300014656	Groundwater	MEENKSLRYRVNVSTSVKGVKTWDCTVDGTNYEQDEVLAKSDVLVAELEKRYPAPKD*
Ga0180007_100334546	3300014656	Groundwater	MAEVEKTLRYRLNVSTSVKGVKTWDCTVESNYMSMDEVLLESDALVASLESRYPAPEEK*
Ga0180007_100417254	3300014656	Groundwater	MKQSLRYRVNVSTSVKGVKTWDCTVDGEGYEMDEILDRSDELVGKLEQRYPIQVDAK*
Ga0180007_100481975	3300014656	Groundwater	MEEKSLRYRINISTSVKGVKTWECTCDGVGWTDDEILEKSDELVKKLETRYPGPEV*
Ga0180007_100548414	3300014656	Groundwater	MPEVTKSLRYRVNVSTSVKGIKTYECTVDGEGFTMEEVLAESDKLVAELSRRYPPQLGEK
Ga0180007_101168332	3300014656	Groundwater	MTEANKSLRYRVNVSISVKGVKTWDCTVDGENYEMDEVLAKSDELVKKLETRYPASEGQTQI*
Ga0180007_101661866	3300014656	Groundwater	MEVEKSLRYRVNVSTSVKGIKTYDCTVDGTGFEMDEVLKLSDELVAKLDQRYPPQLEVK*
Ga0180007_101889452	3300014656	Groundwater	MMEHEVVVEKSIRYRVNVSISTKGQKTWDCTCDAQGYTKEEVLAESNALVAELEKKYPIQVEAGK*
Ga0180007_101906163	3300014656	Groundwater	MSEIEKSIRYRVNVSTSVKGIKTFDCTVDMLNATMEETLIESDKLVAELSNRYPPQIEEKK*
Ga0180007_102926032	3300014656	Groundwater	MDKSMRYRVNVSTSVKGVKTWDCTVDGEGYAQSDILEASDMLVKELEKRYPISEVLKNG*
Ga0180007_103098131	3300014656	Groundwater	MAEIQKSLRYRVNVSISVKGQKTWDCTCDAEGFTMEEVLAESDKLVAELDQRYPAPIEETKKEK*
Ga0180007_103464585	3300014656	Groundwater	VEVEKSMRYRINISTSVKGIKTFDCTVDGLGYSMEEVLTDSDKLVKELESRYPVNVEVTK
Ga0180007_104294392	3300014656	Groundwater	MEVEKSMRYRVNVSISVKGQKTWDCTTDGQGYTQEEILAESDKLVKALEGRYPAQMGG*
Ga0180007_105532531	3300014656	Groundwater	MEITKSIRYRVNISTSVKGIKTWENTVDCTGYSKEEVMAESDALVAECEKRYQALKEGG*
Ga0180007_106331133	3300014656	Groundwater	MEETKSLRYRVNVSTSVKGVKTWDCTVDATGYGMLFVLEESDKLVEQLGKRYPIEEVK*
Ga0180007_106875623	3300014656	Groundwater	VKELRYRVNVNISTKGMKTWECTVDGTGYEMDEVLKKSDLLVKELEARYPMGEIG*
Ga0180007_108191242	3300014656	Groundwater	MTGITKSIRYRVNVSTSVKGIKTWECTVDGEGYTQREVLLESDQLVASLESRYPPVVESK
Ga0180007_108233441	3300014656	Groundwater	MEVEKSIRYRVNVSTSVKGVKTWDCTVDGQDFPMDVILAESDELVKELEKRYPNMEVLK*
Ga0180007_108578601	3300014656	Groundwater	MTEPNKEDSMEVEKSMRYRVNVSTSVKGIKTWDCTCDGLGYSKEDVLAQSDELVKLLEQRYPAPKE*
Ga0180009_1003156112	3300015370	Groundwater	MAENEITKSMRYRINISVSVKGVKTWECTCDGQGYGMTDVLEASDVLVKALEARYPITVEVK*
Ga0180437_103704484	3300017963	Hypersaline Lake Sediment	MSELQKSLRYRVQVSTSVKGIKTFDCTVDGENFTMDEVLAESDKLVAELMKRYPAPLE
Ga0180732_10207713	3300020171	Groundwater	MKIEKSIRYRVNISTSVKGIKTWDCTVDMEGHEMQDALDHSDALVKELEIRYPISEVITK
Ga0180732_10242535	3300020171	Groundwater	MEIQQSMRYRVNISTSVKGVKTWDCTVDGEGYAMADVLCQSDLFVQELEKRYPISEVITK
Ga0180732_10347363	3300020171	Groundwater	MEIEKSIRYRVNISTSVKGVKTWECTVDGENYTKEEVLIFSDQLVAALESKYPISEVVTK
Ga0180732_12031262	3300020171	Groundwater	MAEVTKSLRYRVNVSTSVKGVKTWECTVDGEGYEMEDILIESDKLVLQLERRYPITEVMT
Ga0214088_12501582	3300020814	Granular Sludge	MEDKIQKSHRYRVNVTTSVKGVKTWDCTVEGENWDMADLLLESDRLVKQLEDRYPIKIEE
Ga0214088_17047785	3300020814	Granular Sludge	MANELQKSHRYRVNISTSVKGVKTWDCTVEGENWDMADLLLESDRLVKQLEDRYPIK
Ga0212124_106647762	3300022553	Freshwater	MEAQKSIRYRVNISTSVKGVKTWDCTVDMEGHAMQDVLEHSDALVQELELRYPVTEVVTK
Ga0209434_11340463	3300025122	Marine	MVEHYCADERSLRYRVNVSTSVKGVKTWDCTVDGTGYTKGRILAESDLLVGELEKRYPFQIEEKK
Ga0209751_113392991	3300025327	Soil	MSTENRSLRYRVNISTSVKGVKTWDCTVDGEGFSMGEVLQFSDGLVAELEKRYP
Ga0209427_106511032	3300027901	Marine Sediment	MEVQKSLRYRVNVSTSVKGIKTFDCTVDGENYEMDEVLEKSDELVKKLEQRYPPVKE
Ga0268276_100645716	3300028299	Saline Water	MAEIEKSIRYRVNVSTSVKGVKTFDCTVDMLNAPMEEVLAESDKLVAELSTRYPPSIEEK
Ga0265293_100348102	3300028603	Landfill Leachate	METSLRFRVNVSTSVKGVKTWDCTVDGENIPMDSILEMSDELVKKLENKYPISEVLK
Ga0265293_107768761	3300028603	Landfill Leachate	MENSLRYRVNVETSVKGVKTFSCTVDGEGYTMEKILSESDKLVKELEKRYNI
Ga0265297_100995973	3300029288	Landfill Leachate	MEVNKSLRYRVNVSTSVKGVKTWDCTVDGEGYGMYQVLQESDSLVRELEKRYPIQLEVREVR
Ga0265297_102107262	3300029288	Landfill Leachate	MEVEKSLRYRVNISTSVKGVKTWDCTVDGEGFSMSDILDASDKLVKSLEVRYPITEVLK
Ga0265297_103041081	3300029288	Landfill Leachate	MEVEKSMRYRVNISTSVKGVKTFDCTVDGLGYSMEEVLQASDQLVNALEVRYPITEVLK
Ga0265297_104723182	3300029288	Landfill Leachate	MEVTKSIRYRVNVSTSVKGIKTWDATVDGDNYTMEEVLAESDKFVAELTRRYPPQVEVTK
Ga0265297_105565143	3300029288	Landfill Leachate	MDKSLRYRVNVSISVKGQKTWDCTCDGENLSMEEVLAESDKLVAELEKRYPASIDTK
Ga0311022_127996812	3300029799	Anaerobic Digester Digestate	MANELQKSHRYRVNISTSVKGVKTWDCTVEGENWDMADLLLESDRLVKQLEDRYPIKIEE
Ga0307928_102100133	3300031227	Saline Water	MAEEVKQSRVRVNVSISVKGVKTWDCTVEKENMGEALAESDKLVAELEKRYPVKMEEK
Ga0307380_107900022	3300031539	Soil	MEVEKSMRYRVNISTSVKGVKTFDCTVDGLGYSIEEVLQASDQLVNALEARYPITEVTNAITK
Ga0307380_111867272	3300031539	Soil	MAEEVTQKSTRYRVNVSISVKGIKTWDCTVDSDYLTRDEVLVESDALVKELEKRYPINLEVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters