Metagenome / Metatranscriptome Family F100264

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100264
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	72 residues
Representative Sequence	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVVSAWFLNRQAEDASVPAEAEASA
Number of Associated Samples	46
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.47 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (39.216 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.21% β-sheet: 0.00% Coil/Unstructured: 44.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF12732	YtxH	85.29
PF09537	DUF2383	5.88
PF07043	DUF1328	2.94
PF05532	CsbD	0.98
PF01177	Asp_Glu_race	0.98
PF01475	FUR	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	2.94
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.98
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.22 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	89.22 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	89.22 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	89.22 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	89.22 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003162\|Ga0006778J45830_1109192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1091	Open in IMG/M
3300003308\|Ga0006777J48905_1068049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	523	Open in IMG/M
3300003308\|Ga0006777J48905_1118389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	516	Open in IMG/M
3300003579\|Ga0007429J51699_1112558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	570	Open in IMG/M
3300003765\|Ga0056911_1013369	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300004785\|Ga0058858_1177779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	523	Open in IMG/M
3300004798\|Ga0058859_11525891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	792	Open in IMG/M
3300004798\|Ga0058859_11588397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	579	Open in IMG/M
3300004800\|Ga0058861_11502420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	570	Open in IMG/M
3300004801\|Ga0058860_12123373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	505	Open in IMG/M
3300004803\|Ga0058862_12784999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	572	Open in IMG/M
3300005365\|Ga0070688_101386538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	569	Open in IMG/M
3300005836\|Ga0074470_11218935	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300009101\|Ga0105247_11707208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	521	Open in IMG/M
3300009148\|Ga0105243_10765982	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300009551\|Ga0105238_10688671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1034	Open in IMG/M
3300010145\|Ga0126321_1069659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	587	Open in IMG/M
3300010154\|Ga0127503_11238288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	727	Open in IMG/M
3300010397\|Ga0134124_11795066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	647	Open in IMG/M
3300011119\|Ga0105246_11984341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	561	Open in IMG/M
3300011332\|Ga0126317_11090711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	564	Open in IMG/M
3300012212\|Ga0150985_101958405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	570	Open in IMG/M
3300012212\|Ga0150985_104672419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1095	Open in IMG/M
3300012212\|Ga0150985_107150167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	517	Open in IMG/M
3300012212\|Ga0150985_108240597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1269	Open in IMG/M
3300012212\|Ga0150985_109508524	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300012212\|Ga0150985_112748083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	838	Open in IMG/M
3300012212\|Ga0150985_113854113	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300012212\|Ga0150985_115267641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	741	Open in IMG/M
3300012212\|Ga0150985_117328819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	513	Open in IMG/M
3300012212\|Ga0150985_117655955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	573	Open in IMG/M
3300012212\|Ga0150985_120789639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	736	Open in IMG/M
3300012212\|Ga0150985_122568813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	800	Open in IMG/M
3300012469\|Ga0150984_100176700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1231	Open in IMG/M
3300012469\|Ga0150984_102309444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	766	Open in IMG/M
3300012469\|Ga0150984_104920516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1036	Open in IMG/M
3300012469\|Ga0150984_106475341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1278	Open in IMG/M
3300012469\|Ga0150984_111411376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2013	Open in IMG/M
3300012469\|Ga0150984_115853142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	752	Open in IMG/M
3300012469\|Ga0150984_122765878	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300012469\|Ga0150984_122957633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	538	Open in IMG/M
3300012469\|Ga0150984_123242245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	835	Open in IMG/M
3300012956\|Ga0154020_10442140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1103	Open in IMG/M
3300019269\|Ga0184644_1259769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	539	Open in IMG/M
3300019269\|Ga0184644_1651786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	517	Open in IMG/M
3300020070\|Ga0206356_11511311	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300020070\|Ga0206356_11647611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	729	Open in IMG/M
3300021951\|Ga0222624_1197034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1067	Open in IMG/M
3300025914\|Ga0207671_11321501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	561	Open in IMG/M
3300025935\|Ga0207709_11252534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	612	Open in IMG/M
3300026041\|Ga0207639_11310270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	680	Open in IMG/M
3300026118\|Ga0207675_102514305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	526	Open in IMG/M
3300026286\|Ga0209460_1000299	All Organisms → cellular organisms → Bacteria	54498	Open in IMG/M
3300028381\|Ga0268264_10913887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	881	Open in IMG/M
3300029923\|Ga0311347_10980196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	514	Open in IMG/M
3300030000\|Ga0311337_11004784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	727	Open in IMG/M
3300030905\|Ga0308200_1072759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	686	Open in IMG/M
3300030905\|Ga0308200_1080412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	664	Open in IMG/M
3300030905\|Ga0308200_1102817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	611	Open in IMG/M
3300030905\|Ga0308200_1102993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	610	Open in IMG/M
3300030905\|Ga0308200_1163208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	523	Open in IMG/M
3300030905\|Ga0308200_1168057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	518	Open in IMG/M
3300030905\|Ga0308200_1168774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	517	Open in IMG/M
3300030905\|Ga0308200_1183908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	501	Open in IMG/M
3300030993\|Ga0308190_1095536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	645	Open in IMG/M
3300030993\|Ga0308190_1112544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	610	Open in IMG/M
3300030993\|Ga0308190_1139281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	568	Open in IMG/M
3300031058\|Ga0308189_10056422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1111	Open in IMG/M
3300031058\|Ga0308189_10077831	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031058\|Ga0308189_10118069	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031058\|Ga0308189_10211826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	709	Open in IMG/M
3300031058\|Ga0308189_10295008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	631	Open in IMG/M
3300031058\|Ga0308189_10388435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	573	Open in IMG/M
3300031058\|Ga0308189_10472136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	535	Open in IMG/M
3300031058\|Ga0308189_10489695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	528	Open in IMG/M
3300031058\|Ga0308189_10542659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	506	Open in IMG/M
3300031082\|Ga0308192_1028877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	759	Open in IMG/M
3300031082\|Ga0308192_1032769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	726	Open in IMG/M
3300031082\|Ga0308192_1086687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	517	Open in IMG/M
3300031091\|Ga0308201_10115350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	797	Open in IMG/M
3300031091\|Ga0308201_10180426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	684	Open in IMG/M
3300031091\|Ga0308201_10432682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	501	Open in IMG/M
3300031093\|Ga0308197_10068986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	968	Open in IMG/M
3300031093\|Ga0308197_10133187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	778	Open in IMG/M
3300031093\|Ga0308197_10168247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	720	Open in IMG/M
3300031093\|Ga0308197_10392139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	541	Open in IMG/M
3300031093\|Ga0308197_10392952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	540	Open in IMG/M
3300031093\|Ga0308197_10432081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	523	Open in IMG/M
3300031094\|Ga0308199_1151168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	553	Open in IMG/M
3300031096\|Ga0308193_1029728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	748	Open in IMG/M
3300031096\|Ga0308193_1075838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	545	Open in IMG/M
3300031097\|Ga0308188_1034780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	532	Open in IMG/M
3300031114\|Ga0308187_10268987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	627	Open in IMG/M
3300031114\|Ga0308187_10365758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	560	Open in IMG/M
3300031123\|Ga0308195_1028386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	726	Open in IMG/M
3300031123\|Ga0308195_1061802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	564	Open in IMG/M
3300034652\|Ga0316598_191997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	578	Open in IMG/M
3300034653\|Ga0316599_046767	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300034653\|Ga0316599_154598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	608	Open in IMG/M
3300034653\|Ga0316599_167132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	585	Open in IMG/M
3300034653\|Ga0316599_178027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	567	Open in IMG/M
3300034653\|Ga0316599_180403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.84%
Host-Associated	Host-Associated	39.22%
Engineered	Engineered	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.98%
Plants	Host-Associated → Plants	33.33%
Aquatic	Environmental → Aquatic	6.86%
Human	Host-Associated → Human	5.88%
Wastewater	Engineered → Wastewater	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.69%
Freshwater	Environmental → Aquatic → Freshwater	5.88%
Digestive System	Host-Associated → Human → Digestive System	5.88%
Peat	Environmental → Terrestrial → Peat	1.96%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.96%
Sediment	Environmental → Aquatic → Sediment	0.98%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	12.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.88%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.96%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	12.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.96%
Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	39.22%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	12.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	11.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	5.88%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	5.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Wastewater Treatment	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Wastewater Treatment	1.96%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003765	Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI, USA - Reactor 2_5/13/2013_ DNA	Engineered	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026286	Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI, USA - Reactor 2_5/13/2013_ DNA (SPAdes)	Engineered	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034652	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0006778J45830_11091923	3300003162	Avena Fatua Rhizosphere	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATAVSDTEPATETKVKAKASA*
Ga0006777J48905_10680492	3300003308	Avena Fatua Rhizosphere	MSPVNRTPNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASTASNTEAQRETERASA*
Ga0006777J48905_11183892	3300003308	Avena Fatua Rhizosphere	MLPDNRVSDGNNLLISLASTVVVGYLTTRYKFFRSLWRFMPVLVIVTAWFLNRQAEDASMPTEAEAKPKRHKVSA*
Ga0007429J51699_11125582	3300003579	Avena Fatua Rhizosphere	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATAVSDTEPATETKVKASA*
Ga0056911_10133692	3300003765	Wastewater Treatment	MSHGKTATGNNMLLSLASTLVVGYLTTRFRFFRFMWRFMPLLVVVSAWFMNRQAETVSEQESDERVKEPAA*
Ga0058858_11777792	3300004785	Host-Associated	MSPANRRATDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDAATAPIPDAEATA*
Ga0058859_115258911	3300004798	Host-Associated	MSPANRRATDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDAATAP
Ga0058859_115883972	3300004798	Host-Associated	MSPANSTTQGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLVVVTAWFFNRQGEAALSEAVVEVEPEPKAKKATA*
Ga0058861_115024201	3300004800	Host-Associated	MSPANRNTNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASTAPAAEAETDVERASA*
Ga0058860_121233731	3300004801	Host-Associated	MSPANRTSDGNNLLISLASTVIVGYLTTRFRLFRTMWRFMPLLVVVTAWFLNRQAEDASTASEEMAEEAEAI
Ga0058862_127849991	3300004803	Host-Associated	MSPANRNTNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASTAPAAEAETDVERA
Ga0070688_1013865382	3300005365	Switchgrass Rhizosphere	MSPANRTSDGNNLLISLASTVIVGYLTTRFRLFRTMWRFMPLLVVVTAWFLNRQGEDASTASEEMAEEAEAIA*
Ga0074470_112189353	3300005836	Sediment (Intertidal)	MSPANRSSDGNYLLISLASTMVVGYLSTRFKLFRALWRFLPLLVVVSAWFINRQVGGESTTVGATVTEPKAKASP*
Ga0105247_117072082	3300009101	Switchgrass Rhizosphere	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATTVSEPETETKVKASA*
Ga0105243_107659822	3300009148	Miscanthus Rhizosphere	MLPDNRRSDGNNLLISLASTVVVGYLTTRFKMFRTLWRFMPLLVIVTAWFLNRQAEDASTAAAETEAEAVA*
Ga0105238_106886713	3300009551	Corn Rhizosphere	MLPANRATDGNNLLISLASTITVGYLITRFRMFRTLWRFLPLLVVVTAWFFN
Ga0126321_10696591	3300010145	Soil	MLPANRTSNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASTTFQSDEEPKTKAEKASA*
Ga0127503_112382881	3300010154	Soil	MLPDNRASDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATTTSDIEPETETKVKASA*
Ga0134124_117950662	3300010397	Terrestrial Soil	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATTTPNTEPETETKVKASA*
Ga0105246_119843412	3300011119	Miscanthus Rhizosphere	MSPANQTSEGNNLLVSLATTMVVGYVTMRFRTFRTLWRFMPLLVVITAWFINRQAEEEAVSAAEAEAEAIA*
Ga0126317_110907112	3300011332	Soil	MLPANRTSDGNNLLISLASTMIVGYLSTRFKLFRALWRFIPLLAVVTAWFLNRQAEDASTTSNAEVQAEIEKASA*
Ga0150985_1019584051	3300012212	Avena Fatua Rhizosphere	MSPANRSSDGNNLLISLASTMVVGYLSTRFKLFRTLWRFLPLLVVVTAWFFNRQAEDASTLAEGQPEAEEKPKAKASA*
Ga0150985_1046724191	3300012212	Avena Fatua Rhizosphere	MSPASNRAADGNNLLISLASTVAVGYLSTRFKLFRRLWRFVPLLVVLSAWFLNRQAEETSLPMDEAEVTA*
Ga0150985_1071501672	3300012212	Avena Fatua Rhizosphere	MLPANRASDGNNLLISLASTITVGYLITRFRMFRTLWRFLPLLVVVTAWFFNRQAENAAMPAEGEAEPERKKATA*
Ga0150985_1082405974	3300012212	Avena Fatua Rhizosphere	MLPDNRVSDGNNLLISLASTVVVGYLTTRYKFFRSLWRFMPVLVIVTAWFLNRQAEDASMPSEVEARPERHKVSA*
Ga0150985_1095085241	3300012212	Avena Fatua Rhizosphere	MLPANRASDGNNLLISLASTITVGYLITRFRMFRTLWRFLPLLVVVTAWFFNRQAENASTTSEPEPEEEPKRKRATA*
Ga0150985_1127480833	3300012212	Avena Fatua Rhizosphere	MSATNRASDGNNLLISLASTMIVGYLSTRFKLFRTLWRFLPLLVVVTAWFLNRQAEEAATAPDLVSEPESETASA*
Ga0150985_1138541135	3300012212	Avena Fatua Rhizosphere	MLPDNRASDGNNLLISLASTITLGYLITRFRMFRTLWRFLPLLVVVTAWFFNRQAEDAASTSENSESEVEEKPERKRASA*
Ga0150985_1152676413	3300012212	Avena Fatua Rhizosphere	MSPANRRASDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDAATAPVPEAEAIA*
Ga0150985_1173288192	3300012212	Avena Fatua Rhizosphere	MYPANRTKNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQGEAALTGSEATVEVDSNVEKASA*
Ga0150985_1176559552	3300012212	Avena Fatua Rhizosphere	MFPANRTPNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASRASDAQAQPETEKASA*
Ga0150985_1207896391	3300012212	Avena Fatua Rhizosphere	MLPANRASDGNNLLISLASTLVVGYLSTRFKLFRTLWRFLPLLVVVSAWFFNRQAEDASMPVEEAEVTT*
Ga0150985_1225688133	3300012212	Avena Fatua Rhizosphere	MSPANRNSDGNNLLVSLASTMIVGYLSTRFKLFRTLWRFLPLLVVVTAWFFNRQAEDASTTSEAEVEVEPEHKAKKATA*
Ga0150984_1001767003	3300012469	Avena Fatua Rhizosphere	MSPANRRASDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDAATAPVPEAEATA*
Ga0150984_1023094441	3300012469	Avena Fatua Rhizosphere	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATTTPDTEPAPAKKVKVSA*
Ga0150984_1049205163	3300012469	Avena Fatua Rhizosphere	MSAANRRSSDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVIVSAWFLNRQAEDASTAP
Ga0150984_1064753411	3300012469	Avena Fatua Rhizosphere	MSPANRRASDGNNLLMSLASTVIVGYLSTRFRLFRTLWRFLPLLVVVSAWFLNRQAEDAATAPIPEAEATA*
Ga0150984_1114113761	3300012469	Avena Fatua Rhizosphere	MSPASNRAADGNNLLISLASTVAVGYLSTRFKLFRRLWRFVPLLVVLSAWFLNRQAEETS
Ga0150984_1158531423	3300012469	Avena Fatua Rhizosphere	MYPANRTKNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQGEAALIGSEAAVEVDSNVEKASA*
Ga0150984_1227658783	3300012469	Avena Fatua Rhizosphere	MLPDNRVSDGNNLLISLASTVVVGYLTTLYKFFRSLWRFMPVLVIVTAWFLNRQAEDASMPSEVEARPERHKVSA*
Ga0150984_1229576332	3300012469	Avena Fatua Rhizosphere	MSPANSTTQGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLVVVTAWFLNRQGEGALTASEPVLEVEPEPKAKKATA*
Ga0150984_1232422453	3300012469	Avena Fatua Rhizosphere	MSLDNRTSDGNNLLISLASTMIVGYLSTRFKLFRTLWRFLPLLVVVTAWFLNRQAEDASTGSEEMMSEAEEATA*
Ga0154020_104421401	3300012956	Active Sludge	MSRANRTSDGNNLLISLASTMVVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDASTAADEVEPEA
Ga0184644_12597692	3300019269	Groundwater Sediment	MSPANRRSTDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFIPLLVVVSAWFLNR
Ga0184644_16517862	3300019269	Groundwater Sediment	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKMFRTLWRFMPLLVIVTAWFLNRQAEDASMAAEAEAEPVA
Ga0206356_115113113	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MLPANRATDGNNLLISLASTITVGYLITRFRMFRTLWRFLPLLVVVTAWFFNRQAEDASSTSEAEPEAEEPKRKRATA
Ga0206356_116476113	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATTTPNTEPETETKVKASA
Ga0222624_11970343	3300021951	Groundwater Sediment	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFRRLWRFVPLLVVISAWFLNRQAEDASMASDTAPETE
Ga0207671_113215012	3300025914	Corn Rhizosphere	MLPDNRTSDGNNLLISLASTVVVGYLTTRYRMFRTLWRFMPLLVIVTAWFLNRQAEDASMPAEVEAKPQRHKVSA
Ga0207709_112525341	3300025935	Miscanthus Rhizosphere	MLPDNRRSDGNNLLISLASTVVVGYLTTRFKMFRTLWRFMPLLVIVTAWFLNRQAEDASTAAAETEAEAVA
Ga0207639_113102702	3300026041	Corn Rhizosphere	STIVVGYLTTRYRMFRTLWRFMPLLVIVTAWFLNRQAEDASMPAEVEAKPQRHKVSA
Ga0207675_1025143051	3300026118	Switchgrass Rhizosphere	NNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVISAWFLNRQAEDASMATEAEAIA
Ga0209460_100029937	3300026286	Wastewater Treatment	MSHGKTATGNNMLLSLASTLVVGYLTTRFRFFRFMWRFMPLLVVVSAWFMNRQAETVSEQESDERVKEPAA
Ga0268264_109138873	3300028381	Switchgrass Rhizosphere	MLPDNRTSDGNNLLISLASTVVVGYLTTRFKLFRTLWRFVPLLVIVTAWFLKRQAEDATTTPNTEPETET
Ga0311347_109801962	3300029923	Fen	MSPVNKTSDGNSLLISLASTVAVGYLSTRFKLFRRLWRFVPLLVVLSAWFLNRQAENEVQPVVSEATS
Ga0311337_110047841	3300030000	Fen	MSPANRTSDGNNLLISLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDAATASEEMAENVEAIA
Ga0308200_10727592	3300030905	Soil	MSPANSTTQGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLVVVTAWFFNRQGEAALSEAEAVVEVEREPKAKKATA
Ga0308200_10804122	3300030905	Soil	MYPANRTKNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFFNRQGEAALTESASDVEVEPEPKTKKATA
Ga0308200_11028171	3300030905	Soil	MSSANRTSDGNNLLISLASTIVVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDASASAAEVEMEAEASA
Ga0308200_11029931	3300030905	Soil	MLPANRASDGNNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVISAWFLNRQAEDASMLVEAEATV
Ga0308200_11632081	3300030905	Soil	MLPANRASDGNNLLISLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDASTASEIEPEAKGKAKASA
Ga0308200_11680572	3300030905	Soil	MSPVNRTPNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASTASNAEAQRET
Ga0308200_11687741	3300030905	Soil	MSPANRRSTDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFIPLLVVVSAWFLNRQAEDAATAPIPEAEATA
Ga0308200_11839081	3300030905	Soil	MLPANRTTNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASTASDAEAQPETEKASA
Ga0308190_10955363	3300030993	Soil	MSPANSTTQGNNLLISLASTMIVGYLSTRFKLFRALWRFLPLLVVVSAWFLNRQAEDSATSWDAEAEPK
Ga0308190_11125443	3300030993	Soil	MLPANRVSDGNNLLVSLALTVVTGYLTTRFKLFRTLWRFMPLLVVVTAWFLNRQAEDASMPVEAEATV
Ga0308190_11392811	3300030993	Soil	MSPANRTSDGNNLLISLASTIVVGYLSTRFKLFRTLWRFLPLLVVISAWFLNRQAEDASASAAEVEMEAEASA
Ga0308189_100564223	3300031058	Soil	MSPANRTSDGNNLLISLASTMIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDSATSWAAEAEPKAEKASA
Ga0308189_100778313	3300031058	Soil	MYPANRTKNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFFNRQGEAALTESASDVEVEPEPKAKKATA
Ga0308189_101180693	3300031058	Soil	MLPANRVSDGNNLLVSLALTVVVGYLTTRFKLFSTLWRFMPLLVIVTAWFLNRQAEDASRPVEAEVTV
Ga0308189_102118263	3300031058	Soil	MLPDNRTSDGNNLLISLASTVVVGYLTTRFRMFRTLWRFMPLLVIVTAWFLNRQAEDASMAAEAEAEALA
Ga0308189_102950081	3300031058	Soil	MLPANRASDGNNLLMSLASTMIVGYLSTRFKLFRTLWRFLPLLVVVTAWFFNRQAEDASRLAEGEPEVEEKPKAKASA
Ga0308189_103884352	3300031058	Soil	MLPANRTSDGNNLLISLASTLVVGYLSTRFKLFRTFWRFLPLLVVVSAWFLNRQAEDASTPLEETEVSA
Ga0308189_104721362	3300031058	Soil	MLPANRASDGNNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVISAWFLNRQAEDASMPVEAEATV
Ga0308189_104896952	3300031058	Soil	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFRRLWRFVPLLVVISAWFLNRQAEDASMASDTAPETEPKVKASA
Ga0308189_105426592	3300031058	Soil	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVVSAWFLNRQAEDAAVPDEAEAIA
Ga0308192_10288771	3300031082	Soil	MSAANRRASDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDASTAPVPEAEAEAIA
Ga0308192_10327691	3300031082	Soil	MSPANSTTQGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLVVVTAWFFNRQGEAALSEAEAVVEVEPEPKAKKATA
Ga0308192_10866872	3300031082	Soil	MSPANRRSSDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVIVSAWFLNRQAEDASTAPVPEAEATA
Ga0308201_101153503	3300031091	Soil	MLPANRTTNGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLAVVTAWFLNRQAEDASTASDAEAQPETEKA
Ga0308201_101804263	3300031091	Soil	MSAANRRASDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDASTAPVPEAETEAIA
Ga0308201_104326822	3300031091	Soil	MSPANRRSTDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFIPLLVVVSAWFLNRQAEDAATAPIPEAE
Ga0308197_100689861	3300031093	Soil	MSPANRTSDGNNLLISLASTIVVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDASASAAEVAMEAEASA
Ga0308197_101331873	3300031093	Soil	MLPANRVSDGNNLLVSLALTVVTGYLTTRFKLFRALWRFMPLLVIVTAWFLNRQAEDASMPVDAEVTV
Ga0308197_101682472	3300031093	Soil	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFHKLWRFVPLLVVVSAWFLNRQAEDASIATEAEAIA
Ga0308197_103921391	3300031093	Soil	MLPANRASDGNNLLISLASTVIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDASTASEIEPEAKGKAKA
Ga0308197_103929522	3300031093	Soil	MSPANRRASDGNNLLMSLASTVIVGYLSTRFRLFRTLWRFLPLLVVVSAWFLNRQAEDAATAPIPEAEATA
Ga0308197_104320812	3300031093	Soil	MSAANRRASDGNNLLMSLASTVIVGYLSTRFKLFRTLWRFLPLLVIVSAWFLNRQAEDASTAPVPEAEAIA
Ga0308199_11511682	3300031094	Soil	MLPANRVSDGNNLLVSLALTVVTGYLTTRFKLFRVLWRFMPLLVIVTAWFLNRQAEDASMPVDAEVTV
Ga0308193_10297281	3300031096	Soil	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVVSAWFLNRQAEDASMASDTAPETEPKVKASA
Ga0308193_10758381	3300031096	Soil	MLPANRTSDGNNLLISLASTLVVGYLSTRFKLFRTFWRFLPLLVVVSAWFLNRQAEDASTPLEEAEATA
Ga0308188_10347801	3300031097	Soil	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVVSAWFLNRQAEDASVPAEAEASA
Ga0308187_102689872	3300031114	Soil	MLPANRVSDGNNLLVSLALTVVTGYLTTRFKLFRALWRFMPLLVIVTAWFLNRQAEDASMPVDAEVRV
Ga0308187_103657582	3300031114	Soil	MLPANRTSDGNNLLISLASTVVVGYLSTRFKLFRRLWRFVPLLVVISAWFLNRQAEDATMATEAEAIA
Ga0308195_10283861	3300031123	Soil	MSPANSTTQGNNLLISLASTMIVGYLSTRFKLFRTLWRFIPLLVVVTAWFFNRQGEAALTESEANVEVEPEPKAKKATA
Ga0308195_10618021	3300031123	Soil	MSPANRTSDGNNLLISLASTMIVGYLSTRFKLFRTLWRFLPLLVVVSAWFLNRQAEDSATSWDAEAEPKAEKASA
Ga0316598_191997_330_557	3300034652	Untreated Peat Soil	MSPANRTSDGNNLLISLASTMIVGYLSTRFRLFRTLWRFLPLLVVVSAWFLNRQAEDTSTSSDAEAQPKAEKASA
Ga0316599_046767_857_1078	3300034653	Untreated Peat Soil	MSPANRTADGNNLLISLASTMVVGYLSTRFRLFRTLWRFLPLLVVVSAWFLNRQAEDASMASDNVEQEAKASA
Ga0316599_154598_315_536	3300034653	Untreated Peat Soil	MSPANRTSDGNNLLISLASTVVVGYLSTRFKLFRKLWRFVPLLVVVSAWFLNRQAEDASTASEEMATEAEATA
Ga0316599_167132_334_540	3300034653	Untreated Peat Soil	MSPANKTSDGNNLLISLASTVAVGYLSTRFKLFRRLWRFVPLLVVLSAWFLNRQAENEVEPIVSEATS
Ga0316599_178027_14_235	3300034653	Untreated Peat Soil	MSPANRTSDGNNLLISLASTVVVGYLSTRFKLFRRLWRFVPLLVVVSAWFLNRQTEVATTASEEMEEEAEAIA
Ga0316599_180403_325_549	3300034653	Untreated Peat Soil	MSRDNRTSDGNNLLISLASTMIVGYLSTRFKLFRTLWRFLPLLVVVTAWFLNRQTEDASTASEELTPEAEEATA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100264

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences