Basic Information | |
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Family ID | F099847 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 103 |
Average Sequence Length | 52 residues |
Representative Sequence | MLDGIIYTILNWVDTTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK |
Number of Associated Samples | 84 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 31.07 % |
% of genes near scaffold ends (potentially truncated) | 20.39 % |
% of genes from short scaffolds (< 2000 bps) | 70.87 % |
Associated GOLD sequencing projects | 75 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (49.515 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (40.777 % of family members) |
Environment Ontology (ENVO) | Unclassified (78.641 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (93.204 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 63.46% β-sheet: 0.00% Coil/Unstructured: 36.54% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Seawater Marine Water Marine Surface Seawater Seawater Marine Marine Seawater Marine Marine Seawater Pelagic Marine Seawater Pond Water Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI20151J14362_101813572 | 3300001346 | Pelagic Marine | MLDGIVYTILNWVDNTSHKIRKYMIDKSLPNPCKSAKQWRKDYEKWKKNSTK* |
GOS2234_10531912 | 3300001964 | Marine | MFDVLIYRILDKVETTCGKIREWLINRSLPNPCKSASEWRKDYEKWKKNSTK* |
GOS2243_10558583 | 3300001965 | Marine | MLDGIIYTILNWVDRTSQRIRKYMIERSLPKPCKSANEWRKDYEKWKDNSTK* |
JGI26064J46334_10405281 | 3300003185 | Marine | MLDGIIYTILNWVDSTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0068511_10268132 | 3300005057 | Marine Water | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASQWRKDYEKWKKNSTK* |
Ga0066867_100024446 | 3300005400 | Marine | MLDGIIYTILNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKDNSTK* |
Ga0066845_100196962 | 3300005432 | Marine | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0066845_101997251 | 3300005432 | Marine | MLDGIIYTILNWVDNTSQKIRKYMIEKSLPNPCKSASEWRKDYEKWKKNQHK* |
Ga0066830_100277222 | 3300005433 | Marine | NMLDGIIYTILNWVDNTSQKIRKYMIEKSLPNPCKSASQWRKDYEKWKKNSTK* |
Ga0066865_101718981 | 3300005523 | Marine | MLDGIIYTILNWVDNTSQKIRKYMIEKSLPNPCKSASEWRKDYE |
Ga0066837_100695132 | 3300005593 | Marine | MLDGIIYTILNWVDTTSAKVRQYMINKSLPNPCKSAAEWRKDYDKWKKNNTK* |
Ga0076924_11980672 | 3300005747 | Marine | MLDGIIYTILNWVDNTSHKIRKYMIDKSLPNPCKSAKQWRKDYEKWRKNSTK* |
Ga0066371_100641411 | 3300006024 | Marine | MLDGIIYTLLNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNNTK* |
Ga0066836_100195647 | 3300006166 | Marine | MLDGIIYTILNWVDTTSAKVRKYMIEKSLPNPCKSASEWRKDYDKWKENQHK* |
Ga0066836_104359591 | 3300006166 | Marine | MLDGLIYKILDWIESTCKRVREHLINKSLPNPCKSASEWRKDYEKWKKSSINNNESD* |
Ga0068486_10195413 | 3300006329 | Marine | MFDVLIYRILDKVETTCKKVREYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0068500_11448239 | 3300006332 | Marine | MFDVLIYRILDKVETTCKKIREYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0068500_11509383 | 3300006332 | Marine | MFDVLIYRILDKVETTCKKVREYMINKSLPSPCKSASEWRKDYEKWKENSTK* |
Ga0099954_10195385 | 3300006350 | Marine | MLDGIIFTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKENSTK* |
Ga0099954_10268332 | 3300006350 | Marine | MFDVLIYRILDKVETTCKKIREYMINKSLPSPCKSASEWRKDYEKWKENSTK* |
Ga0066372_101152833 | 3300006902 | Marine | MLEGFVYKLLDKVESTCKRVREHLINKSLPNPCKSAKEWKKDYDSWKKTSINNNDTD* |
Ga0066372_103526662 | 3300006902 | Marine | MLDGFVYKLLDWTESTCKRIREHLINKSLPNPCKSAKEWRNDYEKWKKSRINNNDTD* |
Ga0079245_12610181 | 3300007336 | Marine | ILDKVETTCKKVREYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0079228_10049821 | 3300007341 | Marine | TILNWVDSTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0102954_11440811 | 3300007778 | Water | MLDGIIYTILNWVDTTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKK |
Ga0102960_10006167 | 3300009000 | Pond Water | MLDGIIYTILNWVDTTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0115099_103135302 | 3300009543 | Marine | MLDGIIYTILNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKENSTK* |
Ga0115011_100120477 | 3300009593 | Marine | MLDGIIYSILNWVDTTSAKVRKYMIEKSLPNPCKSASEWRKDYDKWKKNQHK* |
Ga0115011_104086952 | 3300009593 | Marine | MFDGLIYKILDKVESTCKRVREHLINKSLPNPCKSASEWRKDYEKWKKSSINNNESD* |
Ga0115011_111369041 | 3300009593 | Marine | MLDGIIYTILNWVDRTSQRIRKYMIEKSLPSPCKSASEWRKDYEKWKDNSTK* |
Ga0115100_104991822 | 3300009608 | Marine | MLDGIIYTILNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0138358_11049492 | 3300011320 | Marine | VYKLLDKVESTCKRVREHLINKSLPNPCKSAKEWKKDYDSWKKTSINNNDTD* |
Ga0160422_101882523 | 3300012919 | Seawater | MFDVLIYRILDKVETTCGKIREWLINRQLPNPCKSASEWRKDY |
Ga0160422_102545012 | 3300012919 | Seawater | MLDGIIYTILNWVDRTSQRIRKYMVERSLPKPCKSASEWRKDYEKWKKNSTK* |
Ga0160423_100818144 | 3300012920 | Surface Seawater | MLDGIIYTILNWVDNTSQKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0163110_103193682 | 3300012928 | Surface Seawater | MFDVLIYRILDKVETTCKKIREYMIEKSLPNPCKSASEWRKDYEKWKKNSTK* |
Ga0163110_103854862 | 3300012928 | Surface Seawater | MFNVFIYRILDRVETTCEKVREWLIKRDLPNPCKSAKDWRKDYEKWKKNNTK* |
Ga0163108_105991462 | 3300012950 | Seawater | MLEGFVYKLLDKVESTCKRVREHLINKSLPNPCKSAKEWKKDYDNWKKSSINNNDSD* |
Ga0163180_106166451 | 3300012952 | Seawater | MLDGIIYTILNWVDSTSHKIRQYMINKSLPNPCKSASKWRKDYEKWKKNSTK* |
Ga0163180_107309962 | 3300012952 | Seawater | MFDVLIYRILDRVETTCKKIREWLINRSLPSPAKSADEWRKDYEKWKKNSTKYKRGR* |
Ga0163179_1000777615 | 3300012953 | Seawater | MLDGIIYTILNWVDTTSKRIREYMINKSLPSPCKSASEWRKDYDKWKKNQYK* |
Ga0163111_100651261 | 3300012954 | Surface Seawater | MLDGIIYTILNWVDNTSQKIRQYMINKSLPNPCKSASEWRKDYEKWKKNNTK* |
Ga0163111_105658002 | 3300012954 | Surface Seawater | MFNVFIYRILDRVETTCEKVREWLIKRDLPNPCKSASEWRKDYEKWKKNNTK* |
Ga0163111_107261962 | 3300012954 | Surface Seawater | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKKNQHK* |
Ga0163111_127781092 | 3300012954 | Surface Seawater | LDWIESTCKRVREHLINKSLPNPCKSASEWRKDYEKWKKSSINNNESD* |
Ga0181403_10138482 | 3300017710 | Seawater | MLDGIIYTILNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0181396_11379651 | 3300017729 | Seawater | MLDGIIYTILNWVDSTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKENSTK |
Ga0181393_10435802 | 3300017748 | Seawater | MLDGIIYTILNWVDSTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNNTK |
Ga0211479_1021071 | 3300020241 | Marine | MFDVLIYRILDKVETTCKKVREYMINKSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0211529_10618831 | 3300020258 | Marine | YIDNMLDGIIYTILNWVDNTSQKIRQYMINRSLPNPCKSASEWRKDYEKWKKNNTK |
Ga0211526_10233482 | 3300020264 | Marine | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASQWRKDYEKWKKNSTK |
Ga0211648_10432492 | 3300020267 | Marine | MFNVFIYRILDRVETTCEKVREWLIKRDLPNPCKSASEWRKDYEKWKKNNTK |
Ga0211663_10090103 | 3300020292 | Marine | MLDGIIFTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKENSTK |
Ga0211542_10465281 | 3300020312 | Marine | MFDVLIYRILDKVETTCSKIREWLVNRSLPKPCKSASEWRKDYEKWKDNSTK |
Ga0211626_10648142 | 3300020343 | Marine | MFDGLIYTILEKVENTCKKVRKYMIEKSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0211647_102560041 | 3300020377 | Marine | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0211527_100353491 | 3300020378 | Marine | MFDVLIYRILDKVETTCSKIREWLVNRSLPKPCKSASEWRKDYEKWKKNST |
Ga0211652_100881422 | 3300020379 | Marine | MLDGIIYSILNWVDTTSAKVRKYMIEKSLPNPCKSASEWRKDYDKWKKNQHK |
Ga0211476_100592313 | 3300020381 | Marine | MFDVLIYRILDRVEITCKKIREYMINKSLPSPCKSASEWRKDYEKWK |
Ga0211646_100199973 | 3300020383 | Marine | MLEGFVYRLLDKVESTCKKVREHLINKSLPHPIKSAGEWRKDYEKWKKSSINNNDSD |
Ga0211705_100202201 | 3300020395 | Marine | MLDGLIYKILDWVESTCKRVREHLINKSLPNPCKSASEWRKDYEKWKKSSINNNESD |
Ga0211617_100033292 | 3300020401 | Marine | MFDYLIYRILDRVETTCKKVREYMINKSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0211499_102308861 | 3300020402 | Marine | MLDGIIYTILNWVDRTSQRIRKYMIEKSLPNPCKSASEWRKDYEKWKDNSTK |
Ga0211532_100484711 | 3300020403 | Marine | MFDVLIYRILDKVETTCSKIREWLVNRSLPKPCKSASEWRKDYEKWKKNSTK |
Ga0211659_100978712 | 3300020404 | Marine | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKKNQHK |
Ga0211651_101385922 | 3300020408 | Marine | MLDGIIYTILNWVDRTSQRIRKYMIERSLPKPCKSASEWRKDYEKWKKNSTK |
Ga0211516_102553122 | 3300020413 | Marine | MFDVLIYRILDRVETTCKKIREWLINRSLPSPAKSADEWRKDYEKWKKNSTKYKRGR |
Ga0211516_103766601 | 3300020413 | Marine | MLDGIIYTILNWVDSTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0211644_102064201 | 3300020416 | Marine | MLDGIIYTILNWVDNTSQKIRQYMINKSLPNPCKSASEWRKDYEKWK |
Ga0211528_100618473 | 3300020417 | Marine | MFDVLIYRILDKVETTCSKIREWLVNRSLPKPCKSASEWRKDYEKWK |
Ga0211622_102503482 | 3300020430 | Marine | MFNVFIYRILDRVETTCEKVREWLIKRDLPNPCKSARDWRKDYEKWKKNNTK |
Ga0211576_101178532 | 3300020438 | Marine | MLDGIIYTILNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKENSTK |
Ga0211559_100224087 | 3300020442 | Marine | MLDGIIYTILNWVDRTSQRIRKYMIERSLPKPCKSASEWRKDYEKWKDNSTK |
Ga0211564_101486172 | 3300020445 | Marine | MLDGIIYTLLNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNQHK |
Ga0211564_101691712 | 3300020445 | Marine | MLDGLIYKILDWIESTCKRVREHLINKSLPNPCKSASEWRKDYEKWKKSSINNNESD |
Ga0211641_103279402 | 3300020450 | Marine | MLDGIIFTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKQNSTK |
Ga0211643_105163412 | 3300020457 | Marine | MLDGLIYKILDWIESTCKRVREHLINKSLPNPCKSASEWRKDYE |
Ga0211643_105628072 | 3300020457 | Marine | MFNVFIYRILDRVETTCEKVREWLIKRDLPNPCKSAKDWRKDYEKWKKNNTK |
Ga0211676_106034031 | 3300020463 | Marine | DKMLGKXYSSNMFDVILFRILDKVENTCKKTREWLINRSLPNPAKSADEWRKDYEKWKKNSTK |
Ga0211640_105419801 | 3300020465 | Marine | MLDGIIFTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKKNQHK |
Ga0211713_100144093 | 3300020467 | Marine | MLDGLIYKLLDWTESTCKRIREHLINKSLPNPCKSASEWRKDYEKWKKSSINNNESD |
Ga0211713_100421661 | 3300020467 | Marine | MFDVLIYRILDKVETTCKKIREYMINKSLPSPCKSASEWRKDYEKWKENSTK |
Ga0211475_103874182 | 3300020468 | Marine | MFDVILFRILDKVENTCKKTREWLINRSLPNPAKSADEWRKDYEKWKKNSTK |
Ga0211543_1000341813 | 3300020470 | Marine | MLDGLIYKLLDWTESTCKRIREHLINKSLPNPCKSASEWRKDYEKWKKSQYK |
Ga0211579_100001222 | 3300020472 | Marine | MLDGIIYTILNWVDTTSKRIREYMINKSLPSPCKSASEWRKDYDKWKKNQYK |
Ga0211503_100379206 | 3300020478 | Marine | MLDGLIYKLLNWTESTCKRIREHLINKSLPNPCKSASEWRKDYEKWKKSQYK |
Ga0206684_10011362 | 3300021068 | Seawater | MLDGFVYKLLDKIESTCKKVREHLINKSLPNPCKSAKEWRNDYEKWKKSRINNNDTD |
Ga0206679_100205592 | 3300021089 | Seawater | MLDGFVYKLLDKVESTCKKVREHLINKSLPNPCKSAKEWRNDYEKWKKSSINNNDTD |
Ga0206688_110755222 | 3300021345 | Seawater | FVYKLLDKIESTCKKVREHLINKSLPNPCKSAKEWRNDYEKWKKSRINNNDTD |
Ga0206690_104343991 | 3300021355 | Seawater | KLLDKVESTCKKVREHLINKSLPNPCKSAKEWRNDYEKWKKSRINNNDTD |
Ga0206123_100390503 | 3300021365 | Seawater | MLDGIIYTILNWVDTTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0209630_1001673410 | 3300025892 | Pelagic Marine | MLDGIVYTILNWVDNTSHKIRKYMIDKSLPNPCKSAKQWRKDYEKWKKNSTK |
Ga0208410_10348263 | 3300026266 | Marine | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASEWRKDYEKWKKNNTK |
Ga0207993_10224643 | 3300026270 | Marine | MLDGIIYTILNWVDNTSQKIRKYMIEKSLPNPCKSASEWRKDYEKWKKNQHK |
Ga0208764_100133866 | 3300026321 | Marine | MLDGIIYTILNWVDTTSAKVRKYMIEKSLPNPCKSASEWRKDYDKWKENNTK |
Ga0209404_100157994 | 3300027906 | Marine | MLDGIIYTLLNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKKNNTK |
Ga0185543_10974671 | 3300029318 | Marine | MLDGIIYTILNWVDTTSARIRKYMIEKSLPNPCKSASQWRKDYE |
Ga0185543_11098172 | 3300029318 | Marine | MFDVLIYRILDKVETTCSKIREWLVNRSLPNPCKSASEWRKDYEKWKKNSTK |
Ga0315318_101952213 | 3300031886 | Seawater | MLDGFVYKLLDKIESTCKKVREHLINKSLPNPCKSAKEWRNDYEKWKKSRINNNDT |
Ga0310344_104383982 | 3300032006 | Seawater | MFDGLIYKILDKVESTCKRVREHLINKSLPNPCKSASEWRKDYEKWKKSSINNNESD |
Ga0310344_109437822 | 3300032006 | Seawater | MFDVLIYRILDKVETTCKKVREYMINKSLPSPCKSASEWRKDYEKWKENSTK |
Ga0315316_101892041 | 3300032011 | Seawater | MLDGIIYTILNWVDRTSHKIRQYMINKSLPNPCKSASEWRKDYEKWKEN |
Ga0310342_1001388612 | 3300032820 | Seawater | MLEGFVYKLLDKVESTCKRVREHLINKSLPNPCKSAKEWKKDYDSWKKTSINNNDTD |
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