NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099439

Metagenome / Metatranscriptome Family F099439

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099439
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 57 residues
Representative Sequence MRQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Number of Associated Samples 58
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 81.55 %
% of genes near scaffold ends (potentially truncated) 17.48 %
% of genes from short scaffolds (< 2000 bps) 87.38 %
Associated GOLD sequencing projects 50
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.728 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(41.748 % of family members)
Environment Ontology (ENVO) Unclassified
(96.117 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.553 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.35%    β-sheet: 0.00%    Coil/Unstructured: 59.65%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00615RGS 10.68
PF00574CLP_protease 5.83
PF05050Methyltransf_21 1.94
PF136402OG-FeII_Oxy_3 1.94
PF137592OG-FeII_Oxy_5 1.94
PF01501Glyco_transf_8 0.97
PF02675AdoMet_dc 0.97
PF14891Peptidase_M91 0.97
PF02543Carbam_trans_N 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 11.65
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 11.65
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 5.83
COG1442Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferaseCell wall/membrane/envelope biogenesis [M] 0.97
COG1586S-adenosylmethionine decarboxylaseAmino acid transport and metabolism [E] 0.97
COG2192Predicted carbamoyl transferase, NodU familyGeneral function prediction only [R] 0.97
COG5597N-acetylglucosaminyl transferaseCell wall/membrane/envelope biogenesis [M] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.73 %
All OrganismsrootAll Organisms24.27 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000142|LPaug09P16500mDRAFT_c1043993All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300000152|LPjun08P12500mDRAFT_c1029595Not Available825Open in IMG/M
3300000157|LPaug08P261000mDRAFT_c1012513Not Available1323Open in IMG/M
3300000179|LPjun09P16500mDRAFT_c1015393Not Available1261Open in IMG/M
3300000190|LPjun09P161000mDRAFT_c1041594Not Available686Open in IMG/M
3300000222|LPjun09P12500mDRAFT_1011473All Organisms → Viruses → Predicted Viral1964Open in IMG/M
3300001683|GBIDBA_10082273All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote1062Open in IMG/M
3300001683|GBIDBA_10108144All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote1317Open in IMG/M
3300003437|draft_100594Not Available11815Open in IMG/M
3300005945|Ga0066381_10111322Not Available777Open in IMG/M
3300006308|Ga0068470_1176857Not Available779Open in IMG/M
3300006310|Ga0068471_1070949Not Available4668Open in IMG/M
3300006310|Ga0068471_1298620Not Available4011Open in IMG/M
3300006310|Ga0068471_1642691Not Available1265Open in IMG/M
3300006310|Ga0068471_1642748Not Available2294Open in IMG/M
3300006335|Ga0068480_1197932Not Available792Open in IMG/M
3300006336|Ga0068502_1926842All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote566Open in IMG/M
3300006339|Ga0068481_1352566Not Available2355Open in IMG/M
3300006339|Ga0068481_1506829Not Available1976Open in IMG/M
3300006340|Ga0068503_10265711All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote514Open in IMG/M
3300006340|Ga0068503_10436133Not Available3123Open in IMG/M
3300006340|Ga0068503_10537323Not Available1441Open in IMG/M
3300006340|Ga0068503_10669879All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote622Open in IMG/M
3300006340|Ga0068503_10820414All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote746Open in IMG/M
3300006341|Ga0068493_10591914Not Available1490Open in IMG/M
3300007291|Ga0066367_1034320Not Available1754Open in IMG/M
3300007291|Ga0066367_1053347Not Available1433Open in IMG/M
3300007291|Ga0066367_1250643All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote687Open in IMG/M
3300007756|Ga0105664_1041098Not Available1137Open in IMG/M
3300007758|Ga0105668_1055508All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote1068Open in IMG/M
3300009173|Ga0114996_10045558Not Available4013Open in IMG/M
3300009173|Ga0114996_10225669Not Available1497Open in IMG/M
3300009173|Ga0114996_11040723All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote579Open in IMG/M
3300009173|Ga0114996_11148162Not Available545Open in IMG/M
3300009409|Ga0114993_10127613Not Available1991Open in IMG/M
3300009409|Ga0114993_10174257Not Available1671Open in IMG/M
3300009409|Ga0114993_10304597All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote1212Open in IMG/M
3300009409|Ga0114993_10740543Not Available713Open in IMG/M
3300009409|Ga0114993_10966128Not Available608Open in IMG/M
3300009420|Ga0114994_10131321All Organisms → Viruses → Predicted Viral1700Open in IMG/M
3300009420|Ga0114994_10449514Not Available851Open in IMG/M
3300009420|Ga0114994_10847424Not Available593Open in IMG/M
3300009420|Ga0114994_10855158Not Available590Open in IMG/M
3300009425|Ga0114997_10056703Not Available2497Open in IMG/M
3300009425|Ga0114997_10088686Not Available1907Open in IMG/M
3300009622|Ga0105173_1005486Not Available1662Open in IMG/M
3300009705|Ga0115000_10097958Not Available1975Open in IMG/M
3300009706|Ga0115002_11110803Not Available538Open in IMG/M
3300009786|Ga0114999_10509992Not Available927Open in IMG/M
3300009786|Ga0114999_10644014All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote800Open in IMG/M
3300009786|Ga0114999_10879076Not Available656Open in IMG/M
3300010151|Ga0098061_1128065Not Available931Open in IMG/M
3300010883|Ga0133547_10296542All Organisms → Viruses → Predicted Viral3361Open in IMG/M
3300017775|Ga0181432_1108157Not Available833Open in IMG/M
3300017775|Ga0181432_1116499Not Available805Open in IMG/M
3300017775|Ga0181432_1236091Not Available576Open in IMG/M
3300020263|Ga0211679_1026543Not Available1126Open in IMG/M
3300020354|Ga0211608_10069083Not Available801Open in IMG/M
3300020389|Ga0211680_10130607Not Available1015Open in IMG/M
3300020389|Ga0211680_10239451Not Available686Open in IMG/M
3300020399|Ga0211623_10220757Not Available669Open in IMG/M
3300020427|Ga0211603_10436664All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote508Open in IMG/M
3300021068|Ga0206684_1162500All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote734Open in IMG/M
3300021442|Ga0206685_10193621All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote683Open in IMG/M
3300021442|Ga0206685_10211690Not Available653Open in IMG/M
3300027779|Ga0209709_10025583Not Available3758Open in IMG/M
3300027779|Ga0209709_10073567All Organisms → cellular organisms → Archaea1877Open in IMG/M
3300027779|Ga0209709_10150387Not Available1143Open in IMG/M
3300027813|Ga0209090_10057358Not Available2169Open in IMG/M
3300027827|Ga0209035_10489947All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote596Open in IMG/M
3300027838|Ga0209089_10064307Not Available2330Open in IMG/M
3300027838|Ga0209089_10121318Not Available1594Open in IMG/M
3300027838|Ga0209089_10122552Not Available1584Open in IMG/M
3300027838|Ga0209089_10141243Not Available1454Open in IMG/M
3300027838|Ga0209089_10215706Not Available1126Open in IMG/M
3300027838|Ga0209089_10449665Not Available705Open in IMG/M
3300027839|Ga0209403_10205561Not Available1159Open in IMG/M
3300027839|Ga0209403_10408260Not Available712Open in IMG/M
3300027844|Ga0209501_10647784All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote579Open in IMG/M
3300027847|Ga0209402_10123207Not Available1764Open in IMG/M
3300027847|Ga0209402_10640508Not Available594Open in IMG/M
3300028190|Ga0257108_1009718Not Available2806Open in IMG/M
3300028190|Ga0257108_1078727Not Available982Open in IMG/M
3300028192|Ga0257107_1063570Not Available1128Open in IMG/M
3300028192|Ga0257107_1133460Not Available730Open in IMG/M
3300028488|Ga0257113_1061773Not Available1192Open in IMG/M
3300028489|Ga0257112_10140227Not Available865Open in IMG/M
3300031627|Ga0302118_10532899Not Available512Open in IMG/M
3300031757|Ga0315328_10703909All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote571Open in IMG/M
3300031801|Ga0310121_10096569Not Available1902Open in IMG/M
3300031801|Ga0310121_10266443All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote1016Open in IMG/M
3300031803|Ga0310120_10075553Not Available1953Open in IMG/M
3300031803|Ga0310120_10186986Not Available1141Open in IMG/M
3300031804|Ga0310124_10370708Not Available856Open in IMG/M
3300032130|Ga0315333_10542594Not Available544Open in IMG/M
3300032278|Ga0310345_10164093Not Available1992Open in IMG/M
3300032278|Ga0310345_10588776Not Available1070Open in IMG/M
3300032278|Ga0310345_10849360Not Available889Open in IMG/M
3300032278|Ga0310345_11679182All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote620Open in IMG/M
3300032360|Ga0315334_11326229All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote620Open in IMG/M
3300032360|Ga0315334_11372958Not Available608Open in IMG/M
3300032820|Ga0310342_100880682Not Available1042Open in IMG/M
3300034695|Ga0372840_030543Not Available1551Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine41.75%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine17.48%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine10.68%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater6.80%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater5.83%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine3.88%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.91%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater1.94%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume1.94%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000142Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500mEnvironmentalOpen in IMG/M
3300000152Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500mEnvironmentalOpen in IMG/M
3300000157Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 1000mEnvironmentalOpen in IMG/M
3300000179Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500mEnvironmentalOpen in IMG/M
3300000190Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 1000mEnvironmentalOpen in IMG/M
3300000222Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500mEnvironmentalOpen in IMG/M
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300003437Marine microbial communities from the San Pedro channel, Pacific Ocean in the San Pedro Ocean Time-series (SPOT) study- Sample 1EnvironmentalOpen in IMG/M
3300005945Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_BEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006335Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300007291Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300007756Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020263Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX555942-ERR599125)EnvironmentalOpen in IMG/M
3300020354Marine microbial communities from Tara Oceans - TARA_B100000408 (ERX555905-ERR599164)EnvironmentalOpen in IMG/M
3300020389Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)EnvironmentalOpen in IMG/M
3300020399Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)EnvironmentalOpen in IMG/M
3300020427Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)EnvironmentalOpen in IMG/M
3300021068Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027827Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028190Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000mEnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300028488Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320mEnvironmentalOpen in IMG/M
3300028489Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000mEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300031804Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5EnvironmentalOpen in IMG/M
3300032130Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034695Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500mEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LPaug09P16500mDRAFT_104399323300000142MarineMKTFEVDYETTIPPWRFGHEEIEAEDLIAAKKKFCSKHEAARLLKVYMVNTDTLAK*
LPjun08P12500mDRAFT_102959543300000152MarineMRQFQVEYETTLPPWRFGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNTDNSGKP*
LPaug08P261000mDRAFT_101251333300000157MarineMRQFQVDYETTLPPWRFGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP*
LPjun09P16500mDRAFT_101539333300000179MarineMRQFQVDYETTLPPWRFGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDTLAK*
LPjun09P161000mDRAFT_104159413300000190MarineMRQFQVDYETTLPPWRFGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGK
LPjun09P12500mDRAFT_101147353300000222MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKVYMVN*
GBIDBA_1008227323300001683Hydrothermal Vent PlumeMIKEDSLSTMKQFQVDYETTIPPWHYGHEEIEADDITSAKKKFSSKHEAARLLKVYIVNTDNSGKS*
GBIDBA_1010814453300001683Hydrothermal Vent PlumeMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGNP*
draft_10059463300003437MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKVYMVNTDTLAK*
Ga0066381_1011132243300005945MarineMKQFQVDYETTLPPWRYGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0068470_117685713300006308MarineMRQFQVDYETTLPPWRLGHEEIEADDLTSAKEKFCKKHEAARLLKVYMVNTDNSGKP*
Ga0068471_1070949113300006310MarineMKQFQVEYETTLPPWRYGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0068471_129862043300006310MarineMRQFQVDYETTLPPWRHGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNNNNSGKP*
Ga0068471_164269143300006310MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKKEFCSNHEAARLLTVYMVNNDNSGKP*
Ga0068471_164274843300006310MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCCKHEAARLLKVYMVNTDNSGKP*
Ga0068480_119793223300006335MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKKKFCSNHEAARLLKVYMVNTDNSGKP*
Ga0068502_192684223300006336MarineMKQFQVDYETTLPPWRHGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNNDNSGKP*
Ga0068481_135256673300006339MarineMRQFQVDYETTLPPWRLGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0068481_150682943300006339MarineLLNPMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKKKFCSNHEAARLLKVYMVNNDNSGKP*
Ga0068503_1026571113300006340MarineMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYIVNIDNSGKP*
Ga0068503_1043613323300006340MarineMKQFQVDYETTLPPWRYGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNNNNSGKP*
Ga0068503_1053732353300006340MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNNNNSGKP*
Ga0068503_1066987923300006340MarineMRQFQVDYDTTLPRWRYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0068503_1082041433300006340MarineMKQFQVDYETTLPPRRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYLVNTDNSGKP*
Ga0068493_1059191453300006341MarineMRQFQVDYETTLPPWRFGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNNNNSGKP*
Ga0066367_103432053300007291MarineMRQFQVDYETTLPPWRHGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0066367_105334713300007291MarineMKQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNS
Ga0066367_125064323300007291MarineMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYVVNTDNSGKP*
Ga0105664_104109833300007756Background SeawaterMRQFQVDYETTLPPWRFGHEEIEAEVLTAAKKKFCSKHEAARLLKVYMVNNDNSGKP*
Ga0105668_105550833300007758Background SeawaterMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKVYIVNTDNSGKP*
Ga0114996_1004555853300009173MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCSRHEAARLLKIYIVNTDNSGKH*
Ga0114996_1022566913300009173MarineQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP*
Ga0114996_1104072313300009173MarineRQFQVEYETTLPPWRFGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0114996_1114816223300009173MarineMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFNSKHESARLLKVYIVNTDNSGKP*
Ga0114993_1012761343300009409MarineMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFNSKHESARLLKVYIVNTDNSGKT*
Ga0114993_1017425753300009409MarineMKQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0114993_1030459723300009409MarineMRQFQVEYETTLPPWRFGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNNNNSGKP*
Ga0114993_1074054333300009409MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKIYMINTDIPGKVI*
Ga0114993_1096612823300009409MarineMRQFQVDYETTLPPWRYGHEEIEAEDLTAAKKKFCSKHEAARLLKVY
Ga0114994_1013132153300009420MarineMRQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP*
Ga0114994_1044951433300009420MarineMRQFQVEYETTLPPWRFGHEEIEAEDLDAAKKKFCSKHEAARLLKVYIVNTDNSGKP*
Ga0114994_1084742433300009420MarineMKTFEVDYETTIPPWRFGHEEIEAEDLDTAKKKFCSKHEAARLLKIYMINTDIPGKVI*
Ga0114994_1085515833300009420MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKVYMVNTDIPGKVI*
Ga0114997_1005670363300009425MarineMKQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP*
Ga0114997_1008868623300009425MarineMRQFQVEYETTLPPWRFGHEEIEAEDIDAAKKKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0105173_100548613300009622Marine OceanicMIQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCSKHEAARLLKVYIVNT
Ga0115000_1009795843300009705MarineMRQFQVDYETTLPPWRHGHEEIEAEDITAAKKKFCSKHEAARLLKVYIVNTDNSGKP*
Ga0115002_1111080323300009706MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKMFCSKHEAARLLKVYMVNTDTLAR*
Ga0114999_1050999223300009786MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCGKRESARLLKVYMVNTDTLAK*
Ga0114999_1064401423300009786MarineMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFNSKHESARLLKVYIVNTDNSGKP*
Ga0114999_1087907623300009786MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNTDNSGKP*
Ga0098061_112806513300010151MarineMIKEDSSSTMRQFQVDYETTVPPWHTGHEEIEAENLDTVREKFCSKHEAARIYKVT
Ga0133547_1029654273300010883MarineMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEADDLTSAKKKFSSKHEAARLLKVYIVNTDNSGKS*
Ga0181432_110815733300017775SeawaterMKQFQVDYETTLPPWRFGHEEIEADDITSAKEKFCKKHEAARLLKVYMVNTDNSGKP
Ga0181432_111649933300017775SeawaterMRQFQVDYETTLPPWRHGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNNNNSGKP
Ga0181432_123609123300017775SeawaterMRQFQVEYETTLPPWRYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNNDNSG
Ga0211679_102654333300020263MarineMKQFQVDYETTLPPWRYGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNNNNSGKP
Ga0211608_1006908313300020354MarineTLPPWRHGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP
Ga0211680_1013060723300020389MarineMRQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0211680_1023945123300020389MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKVYMVNTDIPGKVI
Ga0211623_1022075713300020399MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP
Ga0211603_1043666423300020427MarineMRQFQVDYETTLPPWRHGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNDDNSGKT
Ga0206684_116250023300021068SeawaterMRQFQVDYETTLPPWRHGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP
Ga0206685_1019362113300021442SeawaterSTMKQFQVDYETTLPPWRFGHEEIEADDITSAKEKFCKKHEAARLLKVYMVNIDNSGKP
Ga0206685_1021169033300021442SeawaterMRQFQVEYETTLPPWRFGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNNNNSGKP
Ga0209709_1002558333300027779MarineMKTFEVDYETTIPPWRFGHEEIEAEDLDTAKKKFCSKHEAARLLKIYMINTDIPGKVI
Ga0209709_1007356723300027779MarineMRQFQVEYETTLPPWRFGHEEIEAEDIDAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0209709_1015038713300027779MarineLNPMRQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP
Ga0209090_1005735823300027813MarineMKQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP
Ga0209035_1048994723300027827MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0209089_1006430763300027838MarineMRQFQVEYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP
Ga0209089_1012131843300027838MarineMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFNSKHESARLLKVYIVNTDNSGKT
Ga0209089_1012255223300027838MarineMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCSRHEAARLLKIYIVNTDNSGKH
Ga0209089_1014124343300027838MarineMKQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0209089_1021570643300027838MarineMRQFQVDYETTLPPWRYGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTD
Ga0209089_1044966513300027838MarineVDYETTIPPWRFGHEEIEAEDLDTAKKKFCSKHEAARLLKIYMINTDIPGKVI
Ga0209403_1020556143300027839MarineMRQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP
Ga0209403_1040826013300027839MarineMRQFQVEYETTLPPWRFGHEEIEAEDLDAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0209501_1064778433300027844MarineEIPHNPIMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFNSKHESARLLKVYIVNTDNSGKT
Ga0209402_1012320753300027847MarineMKQFQVDYETTLPPWRYGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0209402_1064050823300027847MarineMRQFQVDYETTLPPWRYGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNSGKP
Ga0257108_100971853300028190MarineMRQFQVDYETTLPPWRFGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNTDNSGKP
Ga0257108_107872713300028190MarineMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYMVNTDNSGKP
Ga0257107_106357023300028192MarineMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEADDLISAKKKFSSKHEAARLLKVYIVNTDNSGKP
Ga0257107_113346023300028192MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKMFCSKHEAARLLKVYMVNTDIPGKVI
Ga0257113_106177313300028488MarineMIKEDSLSTMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYIVNIDNSGKP
Ga0257112_1014022733300028489MarineMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKVYMVNTDTLAK
Ga0302118_1053289913300031627MarineMRQFQVDYETTLPPWRFGHEEIEAEDLTAAKKKFCSKHEAARLLKVYIVNTDNS
Ga0315328_1070390923300031757SeawaterMRQFQVEYETTLPPWRFGHEEIEAEDLDAAKEKFCSKHEAARLLKVYMVNNNNSGKP
Ga0310121_1009656923300031801MarineMRQFQVDYETTLPPWRFGHEEIEAEDITAAKKKFCSKHEAARLLKVYIVNTDNSGKP
Ga0310121_1026644313300031801MarineMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFSSKHEAARLLKVYIVNTDNSGKP
Ga0310120_1007555333300031803MarineMRQFQVDYETTLPPWRFGHEEIEAEDITAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0310120_1018698623300031803MarineMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYVVNTDNSGKP
Ga0310124_1037070823300031804MarineMRQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYVVNTDNSGKP
Ga0315333_1054259413300032130SeawaterMRQFQVDYETTLPPWRHGHEEIEAEDLDAAKKKFFCNHEAARLLKVYMVNTDNSGKP
Ga0310345_1016409333300032278SeawaterMKQFQVDYETTLPPWRFGHEEIEADDITSAKKKFSSKHEAARLLKVYIVNTDNSGKP
Ga0310345_1058877643300032278SeawaterMRQFQVDYETTLPPWRYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYIVNTDKSGKP
Ga0310345_1084936033300032278SeawaterMKQFQVEYETTLPPWRYGHEEIEAEDLTAAKKKFCSKHEAARLLKVYMVNTDNSGKP
Ga0310345_1167918223300032278SeawaterMKQFQVDYETTLPPWRLGHEEIEADDLTSAKEKFCKKHEAARLLKVYMVNIDNSGKP
Ga0315334_1132622923300032360SeawaterMKQFQVDYETTLPPWRFGHEEIEADDLTSAKEKFCKKHEAARLLKVYMVNIDNSGKP
Ga0315334_1137295813300032360SeawaterMKQFQVDYETTLPPWRFGHEEIEADDLTSAKKKFSSKHEAARLLKVYIVNTDNSGKS
Ga0310342_10088068243300032820SeawaterYGHEEIEAEDLDAAKEKFCSKHEAARLLKVYIVNTDKSGKP
Ga0372840_030543_115_2853300034695SeawaterMKTFEVDYETTIPPWRFGHEEIEAEDLATAKKKFCSKHEAARLLKVYMVNVDTLAK


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