Metagenome Family F099378

Overview

Basic Information

• Family ID: F099378
• Family Type: Metagenome
• Number of Sequences: 103
• Average Sequence Length: 64 residues
• Representative Sequence: FGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGMGTGMDGSTVIFAFGVD
• Number of Associated Samples: 94
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 76
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.709 % of family members)
• Environment Ontology (ENVO): Unclassified (52.427 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (62.136 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 26.14%
  Coil/Unstructured: 73.86%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02566	OsmC	47.57
PF13645	YkuD_2	9.71
PF02616	SMC_ScpA	6.80
PF01887	SAM_HAT_N	4.85
PF03976	PPK2	1.94
PF13568	OMP_b-brl_2	1.94
PF11138	DUF2911	0.97
PF13715	CarbopepD_reg_2	0.97
PF07494	Reg_prop	0.97
PF01741	MscL	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	47.57
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	47.57
COG1354	Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family	Replication, recombination and repair [L]	6.80
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	4.85
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.94
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.97
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.97

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	49.51%
Environmental	Environmental	48.54%
Engineered	Engineered	1.94%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	49.51%
Terrestrial	Environmental → Terrestrial	45.63%
Aquatic	Environmental → Aquatic	2.91%
Wastewater	Engineered → Wastewater	0.97%
Bioremediation	Engineered → Bioremediation	0.97%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.36%
Freshwater	Environmental → Aquatic → Freshwater	1.94%
Sediment	Environmental → Aquatic → Sediment	0.97%
Roots	Host-Associated → Plants → Roots	0.97%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.97%
Metal	Engineered → Bioremediation → Metal	0.97%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	23.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.59%
Loam	Environmental → Terrestrial → Soil → Loam	8.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Ice	Environmental → Aquatic → Freshwater → Ice	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.97%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.97%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	23.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.97%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.97%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.97%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.97%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.97%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.97%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental
3300026983	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)	Environmental
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental
3300034159	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_0210_18	Environmental
3300034815	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B3A4.1	Engineered

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012075532	3300000364	Soil	SGKGVRKVLLQKAPGMNPFGSHKLQSSDKYTFSARKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGTTLFAFGVD*
F14TC_1004568493	3300000559	Soil	SSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMLSMGTGMDGSTVIFAFGMD*
F14TC_1031396112	3300000559	Soil	SSEKYTFSARKVKEGYWELVVDKPLPKGEYAFTMMGMGTSGMDGSTVLFAFGVD*
JGI1027J11758_119873242	3300000789	Soil	SKKNQSSEKFSFSVKKIRDGYWELVVDKQLPKGEYAFSMMDMTGSSGAMGAMLFAFGVD*
JGI1027J12803_1010545732	3300000955	Soil	IFLQKSGGSFSKKNQSSEKFSFSVKKIRDGYWELVVDKQLPKGEYAFSMMDMTGSSGAMGAMLFAFGVD*
JGI25613J43889_102292161	3300002907	Grasslands Soil	MFSANKNQSSDKYTFSVKKVREGYWELLVDKTLSRGEYAFTMMNMGMGNMDGSMLLFAFAVD*
Ga0063356_1063877721	3300004463	Arabidopsis Thaliana Rhizosphere	FASKKMKSSDKYTFSVKKIKEGYWELVVDKSLPKGEYAFSVMSMGMGNMDGSNLMFAFGID*
Ga0070683_10000780912	3300005329	Corn Rhizosphere	NPFGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD*
Ga0068869_1011687941	3300005334	Miscanthus Rhizosphere	FGSHKLQSSEKFTFSARKIKEGYWELIVDKPLPKGEYAFTMMGMGMSGMDGSTVIFAFGVD*
Ga0070680_1011424922	3300005336	Corn Rhizosphere	GYFSMGKNKLQSSDKMTFSVKKIRSGYWELIVDKPLPKGEYAFTMMGMGTSGMDGSSLIFAFGVD*
Ga0070660_1009436302	3300005339	Corn Rhizosphere	LQSSDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD*
Ga0070668_1002935703	3300005347	Switchgrass Rhizosphere	FSMGKNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD*
Ga0070669_1009824161	3300005353	Switchgrass Rhizosphere	GMNPFGSHKLQSSDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD*
Ga0070675_1000766631	3300005354	Miscanthus Rhizosphere	FGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD
Ga0070674_1010511402	3300005356	Miscanthus Rhizosphere	KIYMMKTGGAFSMGKNKSSDKFTFSVRKIRDGYWELVVDKPLPKGEYAFVTMNGYSGTGGMDALLFAFGVD*
Ga0070667_1001200385	3300005367	Switchgrass Rhizosphere	SAKGVRKVLLQKAPGMNPFGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD*
Ga0070667_1009149672	3300005367	Switchgrass Rhizosphere	LQKAPGMNPFGSHKLQSSDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD*
Ga0070694_1010661621	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AFSMGKNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD*
Ga0068867_1001281641	3300005459	Miscanthus Rhizosphere	VKVGGYFSMGKNKLQSSDKMTFSVKKIRNGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSTLIFAFGVD*
Ga0068853_1002625733	3300005539	Corn Rhizosphere	SDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD*
Ga0070696_1004823172	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DKYTFSVKKVREGYWELVVDKPLPKGEYAFTMMNMGMGSMDGSTLLFAFAID*
Ga0070665_1015524331	3300005548	Switchgrass Rhizosphere	VKVGGYFSMGKNKLQSSDKMTFSVKKIRSGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSTLIFAFGVD*
Ga0070664_1004061701	3300005564	Corn Rhizosphere	KLQSSEKYTFSARKIKAGYWELVVDKPLPKGEYAFTMMGMGTGMDGSTVIFAFGVD*
Ga0070664_1012898442	3300005564	Corn Rhizosphere	PGMNPFGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGMGTGMDGSTVIFAFGVD*
Ga0068854_1019237221	3300005578	Corn Rhizosphere	SDKYTFSVKKVREGYWELVVDKPLPKGEYAFTMMNMGMGSMDGSTLLFAFAID*
Ga0068856_1025100781	3300005614	Corn Rhizosphere	KSIRKIYLMKVGGYFSMGKNKLQSSDKMTFSVKKIRSGYWELIVDKPLPKGEYAFTMMGMGTSGMDGSSLIFAFGVD*
Ga0068852_1023157932	3300005616	Corn Rhizosphere	FTVSVKKIRDGYYQLDVDKPLPKGEYAFVMNSMTSADGSALLFAFGVD*
Ga0068861_1026043132	3300005719	Switchgrass Rhizosphere	PGMNPFGSHKLQSSDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD*
Ga0074470_114607642	3300005836	Sediment (Intertidal)	GALPFSSHKIRSSDKYTFGVKKIREGYWELVVDKELPKGEYAFTMMNFMGGGPMGETLVFAFAID*
Ga0068863_1004147291	3300005841	Switchgrass Rhizosphere	PFGSHKLQSSDKYTFSTRKIRDGYWELIADKPLPKGEYAFTMMGTGMDVMSGTTLFAFGVD*
Ga0068863_1015422163	3300005841	Switchgrass Rhizosphere	DAGKGTRKIYTMKTGGAFSMGKNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD*
Ga0068860_1021531951	3300005843	Switchgrass Rhizosphere	FGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGMGTGMDGSTVIFAFGVD
Ga0068862_1024637961	3300005844	Switchgrass Rhizosphere	KAPGMNPFGSHKLQSSEKYTFSARKIKAGYWELVVDKPLPKGEYAFTMMGMGTGMDGSTVIFAFGVD*
Ga0066652_1009382673	3300006046	Soil	RKIYLVKVGGYFSMGKNKLQSSDKMTFSVKKIRNGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSSLIFAFGVD*
Ga0068871_1004692173	3300006358	Miscanthus Rhizosphere	SEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD*
Ga0075428_1004531311	3300006844	Populus Rhizosphere	LMKTGGAVPFAGPKNKSSDKYTLSIKKIREGYWEMIVDKTLPKGEYAFTVMGGTMANADGSVIIFAFAVD*
Ga0075434_1019175132	3300006871	Populus Rhizosphere	ASKKPKSSEKYSFSVKKIRDGYWELVIDKPLPKGEYAFTVMGMGMANMDGTTNIFAFAVE
Ga0079217_104751442	3300006876	Agricultural Soil	SKKMKSSDKYTFSVKKIKDGYWELVVDKSLPKGEYAFSVMSMGMGNMDGSTLMFAFGID*
Ga0068865_1008794542	3300006881	Miscanthus Rhizosphere	MKTGGAFSMGKNKSSDKFTFSVRKIRDGYWELVVDKPLPKGEYAFVTMNGYSGTGGMDALLFAFGVD*
Ga0079215_109527071	3300006894	Agricultural Soil	KILLMKSPGAMPFGSKKMKSSDKYTFSVKKIKDGYWELVVDKSLPKGEYAFSVMSMGMGNMDGSTLMFAFGID*
Ga0075423_122569372	3300009162	Populus Rhizosphere	GKGTRKIYTMKTGGAFSMGKNKSSDKFTFSVKKICEGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD*
Ga0105249_111709831	3300009553	Switchgrass Rhizosphere	QSSDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD*
Ga0134124_123614771	3300010397	Terrestrial Soil	VLLQKAPGMNPFGSHKLQSSEKFTFSARKIKEGYWELIVDKPLPKGEYAFTMMGMGMSGMDGSTVIFAFGVD*
Ga0105246_105002593	3300011119	Miscanthus Rhizosphere	SAKGVRKVLLQKAPGMNPFGSHKLQSSEKYTFSARKIKERHWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD*
Ga0137374_106718251	3300012204	Vadose Zone Soil	MQKIGGAMSFGNKKMQSSYKYTFSVKKIREGYWELVIDKTLPKGEYAFSMMGMGMGNMDGSTTLFSFGID*
Ga0150985_1150028661	3300012212	Avena Fatua Rhizosphere	RKIYLVKVGGYFSMGKNKLQSSDKITFSVKKIRNGYWELVIDKPLSKGEYAFTMMSMGMSGADGSTLIFAFGVD*
Ga0137372_110920911	3300012350	Vadose Zone Soil	LLQKAPGMNPFGKHKIESSDKYTFSVKKIREGYWELVVDKPLPRGEYAFTMQGAGMGDAMTGATTLFAFGVD*
Ga0126375_119799812	3300012948	Tropical Forest Soil	GYFSVGKNKLQSSDKMTFSVRKIRSGYWELVIDKPLSKGEYAFTMMGMGTSGMDGSTLIFAFGVD*
Ga0164298_104040083	3300012955	Soil	FSARKIKEGYWELVVDKPLPKGEYAFTMMGMGTGMDGSTVIFAFGVD*
Ga0154020_101640351	3300012956	Active Sludge	KNKSSDKFTFSVKKIREGYWELVIDKPLNRGEYVFSMMNMGAGAMDGSTVLFAFGVD*
Ga0153916_127642782	3300012964	Freshwater Wetlands	YTFSVRKIRPGYLELVIDKPLPKGEYVFVVMGGFEINLDGSASLFAFEIV*
Ga0126369_116044081	3300012971	Tropical Forest Soil	APGMNPFGSHKIKSSDKYTFSAKKIRDGYWELVIDKPLPQGEYAFTMMGVGANMDMTGGMLVFAFGVD*
Ga0164308_120191832	3300012985	Soil	IYLVKVGGYFSMGKNKLQSSDKMTFSVKKIRNGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSSLIFAFGVD*
Ga0157369_122083641	3300013105	Corn Rhizosphere	KSIRKIYLVKVGGYFSMGKNKLQSSDKMTFSVKKIRSGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSTLIFAFGVD*
Ga0120150_10524221	3300013294	Permafrost	MPFGSKKMQSSDKFTFSVKKIREGYWELVIDKPLPKGEYAFSMMSIGMASMDGGTTLFAFGVD*
Ga0163162_105907721	3300013306	Switchgrass Rhizosphere	AKGVRKVLLQKAPGMNPFGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD*
Ga0157379_103323481	3300014968	Switchgrass Rhizosphere	GSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD*
Ga0132258_114491341	3300015371	Arabidopsis Rhizosphere	KADATKDKRKVYLMKSPGMVNPFGSKKSQSSDKYTFSTRKIKDGYWELLVDKSLPKGEYIFVMSGMSMNNMDGSMMLFAFAVD*
Ga0132255_1006094441	3300015374	Arabidopsis Rhizosphere	MNPFGSHKLQSSEKYTFSARKIKAGYWELVVDKPLPKGEYAFTMMGMGTGMDGSTVIFAFGVD*
Ga0132255_1009582803	3300015374	Arabidopsis Rhizosphere	KSPGMVNPFGSKKSQSSDKYTFSTRKIKDGYWELLVDKSLPKGEYIFVMSGMSMNNMDGSMMLFAFAVD*
Ga0136617_107368901	3300017789	Polar Desert Sand	KYTFSVRKIREGYWELVIDKPLPKGEYAFTMTGGMNMSMDGSVTLYAFGVD
Ga0163161_111575142	3300017792	Switchgrass Rhizosphere	SSDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD
Ga0190272_124204291	3300018429	Soil	SDKFTFSVKKIREGYWELVVDKTLPKGEYAFAVMGGYSGGGGMDALLYAFAIE
Ga0190272_128507112	3300018429	Soil	GAFSMGKNKSSDKFTFSVKKIREGYWELFVDKPLPKGEYAFAVMAGYSGSGGMDALLYAFAID
Ga0190269_108820212	3300018465	Soil	SDKYPFSIKKVREGYWELVPDKKLPKGEYAFVVMGYNSDGSYTLFAFGIN
Ga0190274_134678781	3300018476	Soil	GSKKMKSSDKCSFSVKKIREGYWELIIDKPLTKGEYAFTMMGQPGAGSMDMSVTVFAFGI
Ga0190271_130434391	3300018481	Soil	RKIYLMKTGGAFSMGKNKSSDKFTFSLKKIRGGYWELLIDKSLPKGEYAFAVQGMNMNNMDGSIMIFAFAVD
Ga0210392_107971141	3300021475	Soil	VVMQKSPGASPFGSKKTQSSDKFTFSVKKVREGYWELVIDKPLSKGEYVFTMMNMGMGNMDGSQLLFAFAID
Ga0247786_10141663	3300022883	Soil	MGKNKLQSSDKMTFSVKKIRSGYWELIVDKPLPKGEYAFTMMGMGTSGMDGSSLIFAFGV
Ga0247795_10742062	3300022899	Soil	AGKGTRKIYTMKTGGAFSMGKNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD
Ga0247788_10501561	3300022901	Soil	KFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD
Ga0247797_10738391	3300023057	Soil	KNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD
Ga0247801_10572561	3300023064	Soil	RKIYTMKTGGAFSMGKNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD
Ga0247796_10287653	3300023261	Soil	YKTDAGKGTRKIYTMKTGGAFSMGKNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD
Ga0207642_110814282	3300025899	Miscanthus Rhizosphere	KNIRKIYLMKVGGYFSMGKNKLQSSDKMTFSVKKIRNGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSTLIFAFGVD
Ga0207660_109692212	3300025917	Corn Rhizosphere	GYFSMGKNKLQSSDKMTFSVKKIRSGYWELIVDKPLPKGEYAFTMMGMGTSGMDGSSLIFAFGVD
Ga0207657_104556203	3300025919	Corn Rhizosphere	FSVKKIRSGYWELIVDKPLPKGEYAFTMMGMGTSGMDGSSLIFAFGVD
Ga0207681_102377903	3300025923	Switchgrass Rhizosphere	VLLQKAPGMNPFGSHKLQSSDKYTFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD
Ga0207659_109439412	3300025926	Miscanthus Rhizosphere	SQSSDKYTFSVRKIREGYWELVIDKPLPRGEYAFSMMGMGAGNMDGSTTLFAFAID
Ga0207704_109828492	3300025938	Miscanthus Rhizosphere	RKIYMMKTGGAFSMGKNKSSDKFTFSVRKIRDGYWELVVDKPLPKGEYAFVTMNGYSGTGGMDALLFAFGVD
Ga0207704_112373211	3300025938	Miscanthus Rhizosphere	NPFGSHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTLMGMGTGMDGSTVIFAFGVD
Ga0207704_113842311	3300025938	Miscanthus Rhizosphere	SGKGVRKILLQKAPGMNPFGSHKLQSSDKYTFSTRKIRDGYWELIADKPLPKGEYAFTMMGTGMDVMSGTTLFAFGVD
Ga0207661_100727961	3300025944	Corn Rhizosphere	SHKLQSSEKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD
Ga0207712_104501363	3300025961	Switchgrass Rhizosphere	EGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD
Ga0207640_116246512	3300025981	Corn Rhizosphere	KKMQSSDKYTFSVKKVREGYWELVVDKPLPKGEYAFTMMNMGMGSMDGSTLLFAFAID
Ga0207639_107572521	3300026041	Corn Rhizosphere	TFSAKKIKDGYWELVVDKPLPKGEYAFTMMGMGMDAMGGGTTLFAFGVD
Ga0207702_123003961	3300026078	Corn Rhizosphere	EKSIRKIYLMKVGGYFSMGKNKLQSSDKMTFSVKKIRSGYWELIVDKPLPKGEYAFTMMGMGTSGMDGSSLIFAFGVD
Ga0207641_100832675	3300026088	Switchgrass Rhizosphere	EKYTFSARKIKEGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD
Ga0207676_121901731	3300026095	Switchgrass Rhizosphere	STRKIRDGYWELIADKPLPKGEYAFTMMGTGMDVMSGTTLFAFGVD
Ga0209131_10434285	3300026320	Grasslands Soil	GMFSANKNQSSDKYTFSVKKVREGYWELLVDKTLSRGEYAFTMMNMGMGNMDGSMLLFAFAVD
Ga0207856_10196853	3300026983	Tropical Forest Soil	FGSHKNQSSDKYTFSVRKIREGYWELVVDKSLPKGEYIFTVVNISIGNMDGAMLLFAVD
Ga0209818_12853762	3300027637	Agricultural Soil	PGAMPFGSKKMKSSDKYTFSVKKIKDGYWELVVDKSLPKGEYAFSVMSMGMGNMDGSTLMFAFGID
Ga0209387_12296102	3300027639	Agricultural Soil	SRKILLMKSPGAMPFGSKKMKSSDKYTFSVKKIKDGYWELVVDKSLPKGEYAFSVMSMGMGNMDGSTLMFAFGID
Ga0268266_122386862	3300028379	Switchgrass Rhizosphere	VKVGGYFSMGKNKLQSSDKMTFSVKKIRSGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSTLIFAFGVD
Ga0310813_106630533	3300031716	Soil	TFSARKIKGGYWELVVDKPLPKGEYAFTMMGIGTGMDGSTVIFAFGVD
Ga0310813_115248102	3300031716	Soil	KVLLQKAPGMNPFGSHKLQSSEKFTFSARKIKEGYWELIVDKPLPKGEYAFTMMGMGMSGMDGSTVIFAFGVD
Ga0310897_104869131	3300032003	Soil	ITLYKTDAGKGTRKIYTMKTGGAFSMGKNKSSDKFTFSVKKIREGYWELVVDKPLPKGEYAFVTMNGYSGVGGMDALLFAFGVD
Ga0307470_117066841	3300032174	Hardwood Forest Soil	GGYFSMGKNKMQSSDKMTFSVKKIRSGYWELVIDKPLAKGEYAFTMMGMGTSGMDGSSLIFAFGVD
Ga0335084_115923451	3300033004	Soil	FSLKKIRDGYWELVVDKPLPSGEYAFSMGGMGGMDMTGSLTVFAFGID
Ga0310810_108763942	3300033412	Soil	RKVLLQKAPGMNPFGSHKLQSSDKYTFSARKIRDGYWELVVDKPLPKGEYAFTAMGMGIDVMGGTTLFAFGVD
Ga0370498_163328_2_181	3300034155	Untreated Peat Soil	SKKNKSADKYTFSVKKIREGYWELVIDKTLPGGEYIFTLVDIMSMSGGGESLLFAFAVD
Ga0370509_0146846_668_820	3300034159	Untreated Peat Soil	DKFTFSVKKIREGYWELVIDKFLPKGEYAFTMMNMMSMNGETLLFAFAVD
Ga0373906_185961_330_503	3300034815	Sediment Slurry	KTRESKKYTFSVRKIRPGYLELVIDKPLPKGEYIFVVMGGFEINLDGSASLFAFEIV