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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F099252 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 103 |
| Average Sequence Length | 58 residues |
| Representative Sequence | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGG |
| Number of Associated Samples | 94 |
| Number of Associated Scaffolds | 103 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 1.94 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 89 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (98.058 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.621 % of family members) |
| Environment Ontology (ENVO) | Unclassified (25.243 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (29.126 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 70.00% β-sheet: 0.00% Coil/Unstructured: 30.00% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 103 Family Scaffolds |
|---|---|---|
| PF00437 | T2SSE | 83.50 |
| PF01656 | CbiA | 1.94 |
| PF16976 | RcpC | 1.94 |
| PF04964 | Flp_Fap | 0.97 |
| PF00482 | T2SSF | 0.97 |
| PF07811 | TadE | 0.97 |
| COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
|---|---|---|---|
| COG3847 | Flp pilus assembly protein, pilin Flp | Extracellular structures [W] | 0.97 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 98.06 % |
| All Organisms | root | All Organisms | 1.94 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300026088|Ga0207641_10011445 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 7283 | Open in IMG/M |
| 3300027454|Ga0207623_100039 | All Organisms → cellular organisms → Bacteria | 4548 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 12.62% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 11.65% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 9.71% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 5.83% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.83% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.85% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 4.85% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 3.88% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 3.88% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.91% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 2.91% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.91% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.94% |
| Hot Spring Sediment | Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment | 1.94% |
| Terrestrial | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial | 1.94% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.94% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.94% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.94% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.97% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.97% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.97% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 0.97% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.97% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.97% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.97% |
| Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.97% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.97% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.97% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000890 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300001976 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 | Host-Associated | Open in IMG/M |
| 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Host-Associated | Open in IMG/M |
| 3300001978 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6 | Host-Associated | Open in IMG/M |
| 3300002155 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 | Host-Associated | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
| 3300006576 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006577 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006865 | Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG | Environmental | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300009800 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40 | Environmental | Open in IMG/M |
| 3300009810 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 | Environmental | Open in IMG/M |
| 3300009811 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 | Environmental | Open in IMG/M |
| 3300009819 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 | Environmental | Open in IMG/M |
| 3300009836 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 | Environmental | Open in IMG/M |
| 3300010029 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20 | Environmental | Open in IMG/M |
| 3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
| 3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
| 3300012021 | Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1 | Environmental | Open in IMG/M |
| 3300012159 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2 | Environmental | Open in IMG/M |
| 3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012353 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012358 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012939 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300014965 | Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2 | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
| 3300018031 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1 | Environmental | Open in IMG/M |
| 3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300019767 | Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T | Environmental | Open in IMG/M |
| 3300020005 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2 | Environmental | Open in IMG/M |
| 3300021080 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo | Environmental | Open in IMG/M |
| 3300021951 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300025310 | Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026912 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPB (SPAdes) | Environmental | Open in IMG/M |
| 3300027379 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes) | Environmental | Open in IMG/M |
| 3300027451 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G09K3-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027454 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G09K2-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300027490 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300027560 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes) | Environmental | Open in IMG/M |
| 3300027561 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes) | Environmental | Open in IMG/M |
| 3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027954 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes) | Environmental | Open in IMG/M |
| 3300027957 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes) | Environmental | Open in IMG/M |
| 3300027961 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes) | Environmental | Open in IMG/M |
| 3300028597 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14 | Environmental | Open in IMG/M |
| 3300028707 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148 | Environmental | Open in IMG/M |
| 3300028711 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300030552 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030579 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb10 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030590 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb8 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030592 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030633 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb12 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030904 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030993 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031094 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300031949 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197 | Environmental | Open in IMG/M |
| 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300034149 | Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17 | Environmental | Open in IMG/M |
| 3300034151 | Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17 | Environmental | Open in IMG/M |
| 3300034661 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034672 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034673 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034675 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034690 | Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17 | Environmental | Open in IMG/M |
| 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiDRAFT_16606331 | 3300000033 | Soil | MIHEMQKLFGTDAWLTLVLGAAFGATFLVAVLMLSVSAKGRQRKSLASLMGRKKTTETTWLPEGLTQAG |
| JGI11643J12802_112403272 | 3300000890 | Soil | MGDLFGNDAWLTLVLGAAFVATFLLAVLILSTGRKGQQRRSLAALMGRGGKK |
| JGI11643J12802_117166081 | 3300000890 | Soil | MGDLFGNDAWLTLVLGAAFVATFLLAVMLLSTRTKGQQR |
| JGI24752J21851_10340542 | 3300001976 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLXGRG |
| JGI24746J21847_10231401 | 3300001977 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLMGRGGKKEEAKESSWIPAGMA |
| JGI24747J21853_10347042 | 3300001978 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLM |
| JGI24033J26618_10008011 | 3300002155 | Corn, Switchgrass And Miscanthus Rhizosphere | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLMGRGGKKQEAKESSWIPAGMAE |
| Ga0063356_1043285282 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MEVDAMGDLFGNDAWLTLVLGAAFVATFLLAVMLLSTRTKGQQRRSLAALMGRGKKDAKDAAS |
| Ga0066809_100008336 | 3300005168 | Soil | MTRDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMG |
| Ga0065705_102015802 | 3300005294 | Switchgrass Rhizosphere | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRSKGQQRRSLATLMGRGGKKQAGETSWIPAGM |
| Ga0065705_105840042 | 3300005294 | Switchgrass Rhizosphere | MGVEAMGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGEKKSAKETSW |
| Ga0070675_1018513282 | 3300005354 | Miscanthus Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTGRKGQQRRSLAALMGRGGKKAANETSWIPAGMAEAGDRLATAS |
| Ga0070699_1008442602 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLAALMGRGGKKAANETSWIPAGMAEAGDRLAT |
| Ga0068857_1012304962 | 3300005577 | Corn Rhizosphere | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGR |
| Ga0068864_1016274802 | 3300005618 | Switchgrass Rhizosphere | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEAGDRLATASG |
| Ga0074047_120755891 | 3300006576 | Soil | MTRDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLAALMGRGGKKPAGQTSWIPAGMAEAGDRLATAG |
| Ga0074050_100239992 | 3300006577 | Soil | MTRDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGGKKSAK |
| Ga0075421_1003324801 | 3300006845 | Populus Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQ |
| Ga0075421_1013127421 | 3300006845 | Populus Rhizosphere | MADLFGNDAWLTVVLGAAFVATFLVAVLLLSTRSKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEAGDRLATAS |
| Ga0075421_1022345752 | 3300006845 | Populus Rhizosphere | MSDLFGNDAWLTFVLGAAFVATFLLAVLLLSTRTKGQQRRSLAGLMGRGKKDTPSETSWMPAGLAQAGDRLATAGGFGGR |
| Ga0073934_100689671 | 3300006865 | Hot Spring Sediment | MSDLFGNDAWLTFVLGAAFVATFLLAVLLLSTRTKGQQRRSLAGLMGRGKKDAASETSWIPAGMAQAGERLA |
| Ga0075434_1002123043 | 3300006871 | Populus Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLAALMGRGGKKAANETSWIPAGMAEAGDRLATA |
| Ga0105069_10051031 | 3300009800 | Groundwater Sand | MGDLFANDAWLTVVLGAAFVATFLLAVLLLSTRTKGQQRRSLA |
| Ga0105088_10429362 | 3300009810 | Groundwater Sand | MTQIQKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRSKGRRRRS |
| Ga0105084_10501622 | 3300009811 | Groundwater Sand | MTQIEKLLGTDAWLTLVLGAAFVAPFLLALLLLSGRWKGRRRRSLANLPLGRGKDAAVET |
| Ga0105087_11113752 | 3300009819 | Groundwater Sand | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTKSKGQQRRSLAALMGRGGKKAANETSWIPAGMAE |
| Ga0105068_10946642 | 3300009836 | Groundwater Sand | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTGKKGQQRRSVAALMGRGGKKAANEASWIPAGMAEAGDRLATA |
| Ga0105074_10259671 | 3300010029 | Groundwater Sand | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTGKKGQQRRSVAAL |
| Ga0126315_101586712 | 3300010038 | Serpentine Soil | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGGKKQTGETSWIPAGMAEAGDRLATASGFSARLE |
| Ga0126308_103897321 | 3300010040 | Serpentine Soil | MEVGAMGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGGKKQTGETSWIPAGMAEAGDR |
| Ga0126312_104341691 | 3300010041 | Serpentine Soil | MTRDLFGNDAWLTLVLGAAFVATFLLAMLLLSTRTKGQQR |
| Ga0126314_105775492 | 3300010042 | Serpentine Soil | MIHEIQTLFGTDAWLTLVLGAAFGATFLLAVLILSVRAKG |
| Ga0120192_100964542 | 3300012021 | Terrestrial | MGDLFGNDAWLVAVLGAAFVATFLLAVLLLSTRSKGQQRRSLATLKG |
| Ga0137344_10675931 | 3300012159 | Soil | MSDLFGNDAWLTLVLGTAFVATFLVAVMLLSTRTKGQQRRSLAGLMGRGKKDAASETSW |
| Ga0137374_109341811 | 3300012204 | Vadose Zone Soil | MSRIQELFGTDAWLTLVLGAAFVAAFLLAVLLLSMRAKGRQRRSMSQLMLGR |
| Ga0137367_100515504 | 3300012353 | Vadose Zone Soil | MEVEAMGDLFGNDAWLLVVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWI |
| Ga0137367_105176132 | 3300012353 | Vadose Zone Soil | MSQIEKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRAKGRRRRSVANLMLGRGKDTAVETTW |
| Ga0137367_110221162 | 3300012353 | Vadose Zone Soil | MEVDAMGDLFGNDAWLLVVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEA |
| Ga0137368_104248341 | 3300012358 | Vadose Zone Soil | MEDEAMGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEAGD |
| Ga0137373_110160051 | 3300012532 | Vadose Zone Soil | MTQIQKLFGTDAWLTIVLGAAFVAAFLLAVLLLSMRAKGRQRRSMSQLM |
| Ga0162650_1000610671 | 3300012939 | Soil | MGDLFGNDAWLTVVLGAAFVATFLLAVLLLSTRSKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEAGDRLATASGFS |
| Ga0164300_102849521 | 3300012951 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLAT |
| Ga0120193_100046612 | 3300014965 | Terrestrial | MEVGAMGDLFGNDAWLTLVLGTAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGGKKQTGETSWIPAGMAEAGDRLA |
| Ga0132256_1009857501 | 3300015372 | Arabidopsis Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRG |
| Ga0132255_1035616371 | 3300015374 | Arabidopsis Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGEKKSAKETSWIPAGMAEAGDRL |
| Ga0184605_104789452 | 3300018027 | Groundwater Sediment | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRG |
| Ga0184634_103963942 | 3300018031 | Groundwater Sediment | MTQIEKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRSKGRRRRSVANLMLGRGKDAAVETTW |
| Ga0184626_100436091 | 3300018053 | Groundwater Sediment | MTQIEKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRSKGRRRRSVANLMLGRGKDTAVETTWMPAGLAQAG |
| Ga0184626_101759072 | 3300018053 | Groundwater Sediment | MTREIQKLLGTDAWLTLVLGAAFVAAFLVAVLLLSMRAKGRQRRSLANLMLGRGKDAATETTWMPAG |
| Ga0184626_104044341 | 3300018053 | Groundwater Sediment | MSDLFGNDAWLTFVLGAAFVATFLLAVLLLSTRTKGQQRRSLAGLMGRGKKDA |
| Ga0184625_102500581 | 3300018081 | Groundwater Sediment | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTKSKGQQRRSL |
| Ga0190267_105782261 | 3300019767 | Soil | MTRDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRSKGQQRRSLAGLMGRGKKEAASETS |
| Ga0193697_11295511 | 3300020005 | Soil | MADLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGRPR |
| Ga0210382_101558551 | 3300021080 | Groundwater Sediment | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEAGDRLATASGFSGRLEL |
| Ga0222624_11781222 | 3300021951 | Groundwater Sediment | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLVGRGGKKQAGETSWIPA |
| Ga0209172_101465542 | 3300025310 | Hot Spring Sediment | MSDLFGNDAWLTFVLGAAFVATFLLAVLLLSTRTKGQQRRSLAGLMGRGKKD |
| Ga0207650_110854581 | 3300025925 | Switchgrass Rhizosphere | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLMGRG |
| Ga0207659_108248442 | 3300025926 | Miscanthus Rhizosphere | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSW |
| Ga0207639_119583501 | 3300026041 | Corn Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRR |
| Ga0207641_100114459 | 3300026088 | Switchgrass Rhizosphere | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLMGR |
| Ga0207641_109592861 | 3300026088 | Switchgrass Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLLAVLILSTRTKGQQRRSLAA |
| Ga0208520_10011541 | 3300026912 | Soil | MTRDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGGKKSAKETSWIPAGMAEAGDRLATA |
| Ga0209842_10721991 | 3300027379 | Groundwater Sand | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTGKKGQQRRSVAALMGRGGKKA |
| Ga0207599_1001942 | 3300027451 | Soil | MSDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGM |
| Ga0207623_1000391 | 3300027454 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGM |
| Ga0209899_10646502 | 3300027490 | Groundwater Sand | MSDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLAGLMGRGKKDTASETTW |
| Ga0207981_10025491 | 3300027560 | Soil | MTRDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQR |
| Ga0209887_10985802 | 3300027561 | Groundwater Sand | MTQIEKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRSKGRRRRSVANLMLG |
| Ga0209481_102089012 | 3300027880 | Populus Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLLAVLILSTRTKGQKR |
| Ga0209859_10830112 | 3300027954 | Groundwater Sand | MTQIQKLLGTDAWLTLILGAAFVAAFLVAVLLLSMGAKGRKR |
| Ga0209857_10500881 | 3300027957 | Groundwater Sand | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTGKKGQQ |
| Ga0209853_11522881 | 3300027961 | Groundwater Sand | MTQIEKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRSKGRRRRSVANLMLGRGKDAAVETTWMPAG |
| Ga0247820_105083752 | 3300028597 | Soil | MGDLFGNDAWLTLVLGAAFVATFLLAVMLLSTRTKGQQRRSLAALMGRGKKDAKDAASETSWIP |
| Ga0307291_10446281 | 3300028707 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQ |
| Ga0307293_100059401 | 3300028711 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWI |
| Ga0307312_105551811 | 3300028828 | Soil | MTQIEKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRAKGRRRRSVANLMLGRGKDTAVETTWMP |
| Ga0307304_105049691 | 3300028885 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSL |
| Ga0247654_10004103 | 3300030552 | Soil | MSDLFGNDAWLTFVLGAAFLATFLLAVLLLSTRSKGQQRRSLAGLMGRGKKDTASETSW |
| Ga0247633_102224781 | 3300030579 | Soil | MSDLFGNDAWLTFVLGAAFLATFLLAVLLLSTRSKGQQRRSLAGLMGRGKK |
| Ga0247643_10010362 | 3300030590 | Soil | MSDLFGNDAWLTFVLGAAFLATFLLAVLLLSTRSKGQQRRSLAGLMGRGKKDTASETSWMPAGLAQAG |
| Ga0247612_10147112 | 3300030592 | Soil | MSDLFGNDAWLTFVLGAAFVATFLLAVLLLSTRSKGQQRRSLAGLMGRSKKDAAAETS |
| Ga0247623_100406141 | 3300030633 | Soil | MSDLFGNDAWLTFVLGAAFVATFLLAVLLLSTRSKGQQRRSLAGLMGRGKKDAASETSWMPAGLAQA |
| Ga0308198_10059851 | 3300030904 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEAGDRLATASGFSG |
| Ga0308190_10068932 | 3300030993 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKK |
| Ga0308189_102650411 | 3300031058 | Soil | MADLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETSWIPAGMAEAGDRLATAS |
| Ga0308197_100701521 | 3300031093 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGG |
| Ga0308199_11368051 | 3300031094 | Soil | MGDLFGNDAWLTVVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAGETS |
| Ga0308187_101396881 | 3300031114 | Soil | MTQIEKLLGTDAWLTLVLGAAFVAAFLLAVLLLSVRAKGRRRRSVANLMLGRGKDAAVETTWMPAGLAQA |
| Ga0310887_107641161 | 3300031547 | Soil | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLMGRGGKKQE |
| Ga0310886_105475331 | 3300031562 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGGKKQAKESSWIPAGMAEAGDRLATAS |
| Ga0310904_107373722 | 3300031854 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKG |
| Ga0310900_115514561 | 3300031908 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGEKKSAK |
| Ga0214473_108990031 | 3300031949 | Soil | MIREIQKLFGTDAWLTLVLGAAFAGTFLLAVLILSVTSKGRKRRSLAVLMGRGKKATDETSWVPTGLAQAGERLAEAGGFSSR |
| Ga0307409_1008601761 | 3300031995 | Rhizosphere | MGDLFGNDAWLTLVLGAAFVATFLLAVLLLSTRTKGQQRRSLATLMGRGG |
| Ga0310890_111255991 | 3300032075 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGRGE |
| Ga0364929_0275066_3_191 | 3300034149 | Sediment | MSDLFGNDAWLTLVLGAAFVATFLLAVMLLSTRTKGQQRRSLAGLMGRGKKDAASETSWIPAG |
| Ga0364935_0046349_1_120 | 3300034151 | Sediment | MTPLFGNDAWLTLVLGAAFVATFLLALLLLSTRTKGQQRR |
| Ga0314782_194224_387_521 | 3300034661 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSVATL |
| Ga0314797_003775_1656_1847 | 3300034672 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSVATLMGRGEKKSAKETSWIPAGM |
| Ga0314798_047681_651_794 | 3300034673 | Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQRRSLATLMGR |
| Ga0314800_072217_283_525 | 3300034675 | Soil | MSDLFGNDAWLTLVLGAAFVATFLLGVMLLSTRTKGQQRRSLATLMGRGGKKQEAKESSWIPAGMAEAGDRLATASGFSGR |
| Ga0364923_0051404_1_171 | 3300034690 | Sediment | MSDLFGNDAWLTLVLGAAFVATFLLAVMLLSTRTKGQQRRSLAGLMGRGKKDAASET |
| Ga0373958_0042926_3_119 | 3300034819 | Rhizosphere Soil | MGDLFGNDAWLTLVLGAAFVATFLVAVLLLSTRTKGQQR |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |