Metagenome Family F099084

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099084
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	85 residues
Representative Sequence	VSHLRVAGQAGEAGLIPTTDRFGTALSDIVRCRACGHMQLEHFPADAVLAEAYGDAASADYVEEEAGQRATAR
Number of Associated Samples	88
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.08 %
% of genes near scaffold ends (potentially truncated)	99.03 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.272 % of family members)
Environment Ontology (ENVO)	Unclassified (29.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.311 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.78% β-sheet: 11.88% Coil/Unstructured: 66.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00535	Glycos_transf_2	75.73
PF13450	NAD_binding_8	4.85
PF01593	Amino_oxidase	1.94
PF06723	MreB_Mbl	1.94
PF04828	GFA	1.94
PF08241	Methyltransf_11	0.97
PF08421	Methyltransf_13	0.97
PF13779	DUF4175	0.97
PF14759	Reductase_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	1.94
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.79 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.79 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	14.56 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13.59 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	10.68 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.94 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	10.68 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.94 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.94 %
Unclassified	root	N/A	1.94 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.97 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.97 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.94 %
Unclassified	root	N/A	1.94 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.97 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_106663003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300002568\|C688J35102_117766828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300002568\|C688J35102_119843790	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300003373\|JGI25407J50210_10166309	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300004081\|Ga0063454_101331002	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300004114\|Ga0062593_100730149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300004479\|Ga0062595_101774647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300004480\|Ga0062592_101844602	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005167\|Ga0066672_10028367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3027	Open in IMG/M
3300005184\|Ga0066671_10513858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	770	Open in IMG/M
3300005343\|Ga0070687_100402322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300005347\|Ga0070668_101088156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300005444\|Ga0070694_101165738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300005468\|Ga0070707_101927291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300005529\|Ga0070741_11055327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300005552\|Ga0066701_10661986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300005598\|Ga0066706_10782250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300005615\|Ga0070702_101399046	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300006038\|Ga0075365_10353831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300006038\|Ga0075365_10862859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300006051\|Ga0075364_10574544	Not Available	770	Open in IMG/M
3300006755\|Ga0079222_11543229	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006791\|Ga0066653_10574470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300006876\|Ga0079217_11188345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300006918\|Ga0079216_10214836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1067	Open in IMG/M
3300009012\|Ga0066710_103199170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300009137\|Ga0066709_103580276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300009148\|Ga0105243_13140635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300009176\|Ga0105242_11351817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300010039\|Ga0126309_10288759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300010044\|Ga0126310_10626947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300010044\|Ga0126310_11313620	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300010166\|Ga0126306_10200555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1506	Open in IMG/M
3300011237\|Ga0137008_101545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1674	Open in IMG/M
3300012043\|Ga0136631_10186391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300012043\|Ga0136631_10418566	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012045\|Ga0136623_10185249	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012045\|Ga0136623_10381588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300012092\|Ga0136621_1075663	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300012093\|Ga0136632_10136916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1128	Open in IMG/M
3300012185\|Ga0136619_10226839	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300012186\|Ga0136620_10397463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300012186\|Ga0136620_10469816	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012187\|Ga0136622_10022517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2686	Open in IMG/M
3300012187\|Ga0136622_10206926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300012188\|Ga0136618_10384158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300012208\|Ga0137376_11131921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300012678\|Ga0136615_10435232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300012682\|Ga0136611_10653655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300012684\|Ga0136614_11202112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300012986\|Ga0164304_10383137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300013306\|Ga0163162_12026756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	660	Open in IMG/M
3300015159\|Ga0167630_1021483	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300015165\|Ga0167628_1054998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300015209\|Ga0167629_1062879	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300017787\|Ga0183260_10661898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300018081\|Ga0184625_10105244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1459	Open in IMG/M
3300018422\|Ga0190265_10704530	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300018422\|Ga0190265_11207434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300018432\|Ga0190275_11548949	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300018432\|Ga0190275_11620721	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300018432\|Ga0190275_12129229	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300018432\|Ga0190275_13211590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	529	Open in IMG/M
3300018465\|Ga0190269_10533195	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300018466\|Ga0190268_12192117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300018466\|Ga0190268_12288513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300019377\|Ga0190264_11779410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300019767\|Ga0190267_10151273	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300025885\|Ga0207653_10242202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300025918\|Ga0207662_10538369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300026075\|Ga0207708_11140843	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300028597\|Ga0247820_10690328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300028705\|Ga0307276_10051566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300028744\|Ga0307318_10257859	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300028811\|Ga0307292_10445211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300028812\|Ga0247825_11310712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300028828\|Ga0307312_10770348	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300028828\|Ga0307312_11048783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300028872\|Ga0307314_10225046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300028872\|Ga0307314_10316731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300028875\|Ga0307289_10138280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300028876\|Ga0307286_10398992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300028878\|Ga0307278_10060564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1710	Open in IMG/M
3300028885\|Ga0307304_10182744	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300028885\|Ga0307304_10452688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300028889\|Ga0247827_10177912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300030013\|Ga0302178_10546036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300030399\|Ga0311353_11474890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300030490\|Ga0302184_10127996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300031228\|Ga0299914_10959308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300031229\|Ga0299913_10181204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2083	Open in IMG/M
3300031548\|Ga0307408_100609724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300031824\|Ga0307413_11619739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	575	Open in IMG/M
3300031911\|Ga0307412_10070575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2382	Open in IMG/M
3300031995\|Ga0307409_102156474	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300032074\|Ga0308173_10092930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2327	Open in IMG/M
3300032080\|Ga0326721_10800396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300034131\|Ga0334911_048846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300034143\|Ga0334961_006127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1961	Open in IMG/M
3300034384\|Ga0372946_0097448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1375	Open in IMG/M
3300034402\|Ga0334960_063750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300034687\|Ga0334905_081839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.35%
Host-Associated	Host-Associated	11.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.87%
Aquatic	Environmental → Aquatic	17.48%
Plants	Host-Associated → Plants	11.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.96%
Freshwater	Environmental → Aquatic → Freshwater	16.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.80%
Roots	Host-Associated → Plants → Roots	3.88%
Peat	Environmental → Terrestrial → Peat	2.91%
Sediment	Environmental → Aquatic → Sediment	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.25%
Ice	Environmental → Aquatic → Freshwater → Ice	16.50%
Loam	Environmental → Terrestrial → Soil → Loam	9.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.91%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	16.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.27%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	16.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.88%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.91%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.91%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011237	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 2 - S13.2.20.a - transect 2, age 3 years, surface depth)	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015159	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3C, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015165	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3A, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1066630032	3300000956	Soil	VETCAACGSDRLAPHLKVAGQAGEEGLIPTTDRFGTALSDIVRCSRCGHMQLERFPADAVLAEAYGDAASEDYVAEEVGQRAT
C688J35102_1177668281	3300002568	Soil	LVPHLAVAGDAGEDGLIPTTDRFGTALSNIVACRTCGHMQLETFPPDEDLAEAYGEAESDDYIDEEQGQRATARATL
C688J35102_1198437902	3300002568	Soil	MSHQGEACCACGGAELAPHLRVAGEMGDHGLIPTTDRFGTALADLVRCAGCGHAQLERMPAEGELESAYAEAASEDYVGEEAGQRAT
JGI25407J50210_101663091	3300003373	Tabebuia Heterophylla Rhizosphere	VRARIESDDDAPDRIDAAASARCVACGSYGLEPHLTVSGRSGREGLIPTTDRYGTALSDIVRCPRCGHMQLEHFPPAAELEXAYGDAASEDYIAEEAGQRATARRVLA
Ga0063454_1013310021	3300004081	Soil	MPPTCSACRSARLEPWLQVGGDAGEQGLIPTTDAFGTALSDLVKCADCGHGQLATFPAEAVLAEAYGEAELEAYVEEDAGQRETARRAL
Ga0062593_1007301491	3300004114	Soil	VSARCAVCGGDRLLEHLAVAGDQGPEGLIPTTDRFGTALSDIVWCPACTHMQLREIPSEAELESAYGEAASDDYVEEEAGQRATARDLLERL
Ga0062595_1017746471	3300004479	Soil	VVETCAACGSEELVSHLRVAGQAGAAGLIPTNDQFGTALSDLVRCRVCGHMQLERFPADAVLAEAYGDAASADYVEEEAGQRATARAVLERLERHVG
Ga0062592_1018446021	3300004480	Soil	VCDGDRLLERLAVAGEQGPEGLIPTTDRFGTALSDIVWCPSCTHMQLREIPSEAELERAYGEAASDDYVEEEAGQR
Ga0066672_100283671	3300005167	Soil	MVLVPHMRVAGSAGGEGLIPTTDRYGSALADIVRCPACGHAQLERFPGDIELAEAYGEAESEDYVEEEAGQRATARIALARIERHVGRGALLDLGCWVGFL
Ga0066671_105138581	3300005184	Soil	MVLVPHMRVAGSAGGEGLIPTTDRYGSALADIVRCPACGHAQLERFPGDIELAEAYGEAESEDYVEEEAGQRATARIALARIERHVGRGALLDLGCWVGFLLAE
Ga0070687_1004023222	3300005343	Switchgrass Rhizosphere	VSARCVVCGGDRLLEHLAVGGEQGPEGMIPTTDRFGTALSDIVWCPACTHMQLREIPSEAELERAYGEAASDDYVEEEAGQRATARDLLERLERH
Ga0070668_1010881561	3300005347	Switchgrass Rhizosphere	VCGGDRLLEHLAVAGEQGPEGLIPTTDRFGTALSDIVWCPSCTHMQLREIPSEADLERAYGDAASDDYVEEEAGQRATARDLLERLE
Ga0070694_1011657381	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VSARCVVCGGDRLLEHLAVAGEQGPEGLIPTTDRFGTALSDIVWCPSCTHMQLREIPSEAELERAYGEAASDDYVEEESGQRATALDLLERLERHA
Ga0070707_1019272911	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPHLEVAGEAGPDGLIPTTDQFGTALANIVRCRACAHMQLERFPSDAELGAAYGDAASDDYVEEAAGQRETA
Ga0070741_110553272	3300005529	Surface Soil	VGSLTGARCAACGASELAPHLSVAGDAGPKGLIPTTKRFGTALSDIVRCSACGHMQLASTPSDAMLADAYVRAQSDDYVEEEAGQRATARAALDLIERHVARGRILDLGCWV
Ga0066701_106619862	3300005552	Soil	MRFVPACAACASPVLVPHMRVAGSAGGEGLIPTTDRYGSALADIVRCPACGHAQLERFPDEVELAEAYGEAESEDYVEEEAGQRATARIALER
Ga0066706_107822502	3300005598	Soil	MRFVPACAACASPVLVPHMRVAGSAGGEGLIPTTDRYGSALADIVRCPACGHAQLVRFPDDVELAEAYGEAESEDYVEEEAGQRA
Ga0070702_1013990462	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VCGGDRLLEHLAVAGEQGPQGLIPTTDQFGTAMSDIVWCPACTHMQLREIPTHAELERAYGDAASDDYV
Ga0075365_103538311	3300006038	Populus Endosphere	VSGRCCSCGAGGLAPHLAVAGDAGGQGLIPTTDQFGTALADIVRCGVCGHMQLGVMPSEESLAEAYGEAESGDYVEEEEGQRATARAVLDRLD
Ga0075365_108628591	3300006038	Populus Endosphere	VSGRCCACGAGGLAPHLAVAGDAGGQGLIPTTDQFGTALADIVRCGVCGHMQLAVMPSEESLAEAYGEAESGDYVEEEEGQRATARAVLDRLD
Ga0075364_105745441	3300006051	Populus Endosphere	VSGRCCACGAGGLAPHLAVAGDAGGQGLIPTTDQFGTALADIVRCGVCGHMQLAVMPSEESLAEAYGEAESGDYVEEEEG
Ga0079222_115432291	3300006755	Agricultural Soil	MAAACSACTSRVLEPHLRVAGSAGAEGLIPTTDRFGTALADIVRCTACGHMQLERFPSEAALGEAYAEAESLD
Ga0066653_105744702	3300006791	Soil	MRVGRAAAGEDLIPTTDRYGSAPADLVRCLACGHMQLERFPDETELAEAYRKAASGDYVEEEAGQRATARSTLERIERHVHR
Ga0079217_111883452	3300006876	Agricultural Soil	VDGPDASRCTVCGSRDLRPHLRVAGEAGAAGLIPTTDRFGTALADIVRCGACGHMQLSRFPARDELAEAYGDAASEDYVGEEAGQRATAAAALARIEGALGPRRRRIADLGCWLGFLLAE
Ga0079216_102148361	3300006918	Agricultural Soil	VAGEQGPEGLIPTTDRFGTALSDIVRCADCGHMQLRELPTEAELEQAYGEAASEDYVEEEEGQRATARA
Ga0066710_1031991701	3300009012	Grasslands Soil	VDQTCAACGGAQLRPHLRVAGKAGPDGLIPSTDRFGTALADIVRCESCGHMQLERMPSSAQLAEAYGEAESMDYVEEEAGQRETARRALERIEAHAPRGRL
Ga0066709_1035802761	3300009137	Grasslands Soil	VDQTCAACGGAQLRPHLRVAGKAGPDGLIPSTDRFGTALADIVRCESCGHMQLERMPSSAQLAEAYGEAESMDYVEEEAGQRETARRGLERIEAHAPRGRLL
Ga0105243_131406351	3300009148	Miscanthus Rhizosphere	VSARCVVCGGDRLLEHLAVAGEQGPEGLIPTTDRFGTALADIVWCPACTHMQLREIPSEAELERAYGEAASDDYVEEEAGQRATARDLL
Ga0105242_113518172	3300009176	Miscanthus Rhizosphere	VTRCAACGSSELVPHLRVAGDAGPDGLIPTTDKFGTALSDLVRCTTCGHRQTDPMPADAVLESAYSDAASDDYVDEEAGQRETARR
Ga0126309_102887592	3300010039	Serpentine Soil	VSARCAVCGGDRLAEHLAVAGEQGPEGLIPTTDRFGTALSDIVRCAGCGHMQLREIPTEAELEQAYGEAASDDYVEEEVGQRATAQVLLERLERHVEKGALVDLGCRWASYSTRRGR
Ga0126310_106269472	3300010044	Serpentine Soil	VAGDAGPEGLIPTTDRYGSALSDIVRCERCGHMQLARMPSDAELGEAYGEAASDEYIGEEAGQRETARRALERIERHTGGPGALVDLGCWV
Ga0126310_113136202	3300010044	Serpentine Soil	VERLPVGGEAGPEGLIPTTDKFGTALSDIVSCPECTHMQLREIPTDADLERAYGEAASDDYVEEEA
Ga0126306_102005553	3300010166	Serpentine Soil	VPHLEVAGDAGPGGLIPTTDKFGTALSDLVRCAACGHRQTEPMPADAVLESAYADAASDDYVEEEAGQRETAR
Ga0137008_1015453	3300011237	Glacier Forefield Soil	VTRCAACDAADLVAHLKVAGDAGPDGLIPTTDRFGTALADIVRCTACGHRQTEPMPADAVLESAYADAASEDYVAEEAGQRETARRALT
Ga0136631_101863912	3300012043	Polar Desert Sand	LHLKVAGDAGPDGLIPTTDKFGTALADIVRCPSCGHRQTDPMPADAVLESAYADAASEDYVAEEAGQRETARR
Ga0136631_104185662	3300012043	Polar Desert Sand	VSRCAACGASGLVPHLKVAGDAGPDGLIPTTDRFGTTLADLVRCPGCGHRQTDPMPADDELGRAYAGAASQDYVEQE
Ga0136623_101852492	3300012045	Polar Desert Sand	MSELCQACGRDALRPHLRVGTGAGPEGLIPTTDRFGSALADIVRCAACGHGQLERLPTEAELSTAYTEAASEDY
Ga0136623_103815882	3300012045	Polar Desert Sand	VPTASCCACGSRNLSPHLRVSGDSGEQGLIPTTDAFGTALSDIVRCERCGHMQLERMPAEVELAEAYGDAASADYLAEEAGQRETARRTLA
Ga0136621_10756631	3300012092	Polar Desert Sand	VRLRNLPRVTRCAACGASGLAPHLKVAGDAGPDGLIPTTDKFGTALSDLVRCNSCGHRQTEPMPADAVLESAYAGAASDDYVDEESG
Ga0136632_101369163	3300012093	Polar Desert Sand	LHLKVAGDAGPDGLIPTTDKFGTALADIVRCPSCGHRQTDPMPADAVLESAYADAASEDYVAEEAGQRETARRALEH
Ga0136619_102268392	3300012185	Polar Desert Sand	VAGDAGPDGLIPTTDRFGTALADIVRCPSCGHRQTDPMPADAVLESAYADAASEDYVAEEAGQRE
Ga0136620_103974631	3300012186	Polar Desert Sand	MSELCQACGRDALRPHLRVGTGAGPEGLIPTTDRFGSALADIVRCAACGHGQLERLPTEAELSTAYTEAASEDYVEEEAGQRETARRT
Ga0136620_104698162	3300012186	Polar Desert Sand	VSRCAACGASGLVPHLKVAGDAGPDGLIPTTDRFGTTLADLVRCPGCGHRQTDPMPADDELGRAYAGAASQDYV
Ga0136622_100225171	3300012187	Polar Desert Sand	MSELCQACGRDALRPHLRVGTGAGPEGLIPTTDRFGSALADIVRCAACGHGQLERLPTEAELSTAYTEAASEDYVEEEAGQRETARRTLERIESRVEG
Ga0136622_102069262	3300012187	Polar Desert Sand	VAGDAGPDGLIPTTDKFGTALADIVRCPSCGHRQTDPMPADAVLESAYADAASEDYVAEEAGQRETARRALEH
Ga0136618_103841582	3300012188	Polar Desert Sand	VAGDAGPDGLIPTTDKFGTALADIVRCPVCGHRQTDPMPADAVLESAYADAASEDYVAEEAGQRETARRALEHIEANLTPVPIPPT
Ga0137376_111319212	3300012208	Vadose Zone Soil	MAEAPQCAACGSPELRAHLRVAGEMGDQGLIPTTDRFGTALSDIVRCANCGHMQLARMPGDAELEAAYAGAASDDYVEEEAGQRETARRMLARIE
Ga0136637_10201333	3300012526	Polar Desert Sand	VSRCAACGASGLVPHLKVAGDAGPDGLIPTTDRFGTTLADLVRCPGCGHRQTDPMPADDELGRAYAG
Ga0136615_104352321	3300012678	Polar Desert Sand	VAGDAGPDGLIPTTDRFGTALADIVRCPSCGHRQTDPMPADAVLESAYADAASQDYVAEEAGQRETAR
Ga0136611_106536551	3300012682	Polar Desert Sand	MPHLQVAGDAGAQGLIPTTDRFGTALADIVRCPVCGHGQLARFPGEVELGEAYGEAASSEYVEEEAGQRATARHVLEVVERHRDR
Ga0136614_112021122	3300012684	Polar Desert Sand	MPEDGPGPGAACAACGSLDLAPHLRVGGVAGPEGLIPTTDRFGSALADIIRCGSCEHMQLARMPDAAELAAAYAEASSEDYVEEEAGQRATASADLARIERWTSG
Ga0164304_103831371	3300012986	Soil	LIPTNERFGTALADIVRCQSCGHMQLEDMPAEMELSEAYGEAASADYIEEEAGQRATAAGILERIEAHTEVGAL
Ga0163162_120267562	3300013306	Switchgrass Rhizosphere	MAVAGQAGEAGLIPTTDRFGTALSDIVRCAGCGHMQLREFPADAVLAEAYADAESGDYVEEESGQRETARRLLARIER
Ga0167630_10214831	3300015159	Glacier Forefield Soil	VAYLEVAGDAGPDGLIPSTDRFGTALADLVRCTTCGHRQTDPMPADAVLESAYADAESDDYIEE
Ga0167628_10549982	3300015165	Glacier Forefield Soil	VTRCSACGGAGLVGHLKVAGDAGPDGLIPTTDRFGTALADLVRCPRCSHRQTEPMPADAVLESAYADAASEDYIDEEAGQRETARRA
Ga0167629_10628791	3300015209	Glacier Forefield Soil	VTRCSACGGAGLVGHLKVAGDAGPDGLIPTTDRFGTALADLVRCPRCSHRQTEPMPADAVLESAYSDAASDDYVQEQSGQRE
Ga0183260_106618981	3300017787	Polar Desert Sand	MSELCQACGRDALRPHLRVGTGAGPEGLIPTTDRFGSALADIVRCAACGHGQLERLPTEAELSTAYAEAASEDYVEEEAGQRETARRTLERIESRVEGRSLLDLGCWVGFL
Ga0184625_101052441	3300018081	Groundwater Sediment	VSHLRVAGQAGEAGLVPTTDRFGTALSDIVRCRACGHMQLERFLADAVLAEAYGDAASADYVEEEAGQR
Ga0190265_107045302	3300018422	Soil	VEVHDNGRCSACGASALAAHLRVAGDAGPQGLIPTTDQYGSALSDIVRCARCGHMQLERMPTDAELGEAYGEAASEDYVEEEAG
Ga0190265_112074342	3300018422	Soil	MRPRDSCCAACGSTRLEPHLPVAGDAGADGLIPTTDRFGEALSDIVRCTECGHMQLERMPDDAELAEAYGEARDLEYVEEESRQRSTADWLLSRIERWAGPG
Ga0190275_115489492	3300018432	Soil	VTCCAACGASGLVPHLKVAGDAGPDGLIPTTDRFGTALADIVRCPSCGHRQTDPMPADAVLESAYADAASEDYVAEEA
Ga0190275_116207211	3300018432	Soil	VAGDAGHDGLIPTTDKFGTALADIVRCPSCGHRQTDPMPADAVLESAYADAASEDYVAEEAGQ
Ga0190275_121292291	3300018432	Soil	VTCCAACGASGLIPHLKVAGDAGPDGLIPTTDKFGTALADIVRCPNCGHRQTDPMPADAVLESAYADAASEDYVAEEAGQRE
Ga0190275_132115901	3300018432	Soil	VAGDAGDQGLIPTTDQYGSALSDIVRCASCGHMQLERMPTDAELGEAYGEAASDDYVEEEAGQRETARVALERIERFAERGALLDL
Ga0190269_105331952	3300018465	Soil	MSKAPCTCCGSVTLVPHLKVAGEMGDQGLIPTTDAFGTALADIVRCETCGHMQLEPMPADEVLESAYADAWSDDYVEEADGQR
Ga0190268_121921172	3300018466	Soil	VAGDAGPDGLIPTTDKFGTALADIVRCPNCGHRQTDPMPADAVLERAYADAASEDYVAEEAGQRETARRALEHIEANLTP
Ga0190268_122885131	3300018466	Soil	VTRCSACGASGLVPHLKVAGDAGPDGLIPTTDRFGTALADLVRCLRCGHRQTDPMPADAVLESAYAGAASEDYIEEEAGQRET
Ga0190264_117794102	3300019377	Soil	VPHLKVAGDAGPDGLIPTTDKFGTALSDLVRCESCGHRQTDPMPADAVLESAYADAASGDYVEEATGQRET
Ga0190267_101512732	3300019767	Soil	VTRCAACGASGLVAHLKVAGDAGPDGLIPTTDRFGTALADIVRCTSCGHRQVEPMPADAVLAGAYADAASQDYVEEEA
Ga0207653_102422021	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VSARCVVCGGDRLLEHLAVGGEQGPEGMIPTTDRFGTALSDIVWCPACTHMQLREIPSEAELERAYGEAASDDYVEEEAGQRATARDLLER
Ga0207662_105383692	3300025918	Switchgrass Rhizosphere	MIPTTDRFGTALSDIVWCPACTHMQLREIPSEAELERAYGEAASDDYVEEEAGQRATARDLLERLEGHIDRGAL
Ga0207708_111408432	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VSARCVVCGGDRLLEHLAVGGEQGPEGMIPTTDRFGTALSDIVWCPACTHMQLREIPSEAELERAYGEAASDDYVEEEA
Ga0247820_106903281	3300028597	Soil	MACGAAGPGRLEPHLAVAGSAGGQGLVPTTDRFGTALADIVRCRACGHMQLERIPSEAELVAAYGEAESEDYVAEEAGQRATARGLLERIE
Ga0307276_100515662	3300028705	Soil	VAGDAGPEGLIPTTDRFGTALADIVRCTACGHRQTDPMPADAVLEHAYADAASEDYVAEEAGQRETARRALERIE
Ga0307318_102578591	3300028744	Soil	MTRCSACGASGLVPHLKVAGDAGPDGLIPTTDRFGTALADLVRCQRCDHRQTEPMPTDAVLERAYAGAASEDYIAEEAG
Ga0307292_104452112	3300028811	Soil	VSHLRVAGQAGDEGFTPSTERFGTALSDIVRCRACGHMQLERFPADAVLAEAYGDAASADYIGEEAGQRATARAVLDRLECHVARGTLLDLGS
Ga0247825_113107122	3300028812	Soil	VRRVADHCCACGGGPLALHLRVAGAPGPEGLIPTTDRYGTALADIVRCAACGHGQLARLPPEAELAAAYGDAVSDALAEEEAGQRTTARGLLERLEGVRAPGA
Ga0307312_107703482	3300028828	Soil	MIRSALAADGTCIACGSSALVPRFRVSGEMGKEGLIPTTDSFGVALADIVRCQVCGHMQLERMPEEAKLSDAYGEATSEDYLEEETGQR
Ga0307312_110487831	3300028828	Soil	MREGPQCAACGSPDLRAHLRVAGDMGDQGLIPTTDRFGTALSDIVRCANCGHMQLARMPSDAELETAYADAASDDYVDEEAGQRETARRMLARIEQHAP
Ga0307314_102250461	3300028872	Soil	MAEICAACGGGQLEPHLRVAGDAGRDGLIPDTGRYGTALADIVRCRDCGHMQLERFPPEEDLSEAYAEAESNAYVEEEAGQRETARAILDEIE
Ga0307314_103167311	3300028872	Soil	VSHLRVAGQAGAAGLIPTNDRFGTALSDIVRCRACGHMQLERFPADAVLAEAYGDAASADYVEEEAGQRATARAVLDR
Ga0307289_101382801	3300028875	Soil	VSHLRVAGQAGEAGLIPTTDRFGTALSDIVRCRACGHMQLEHFPADAVLAEAYGDAASADYVEEEAGQRATAR
Ga0307286_103989922	3300028876	Soil	VSHLRVAGQAGEAGLIPTTDRFGTALSDIVRCRACGHMQLERFPADAVLAEAYGDAASADYVEEEAGQRATARAVLERLERHVGRC
Ga0307278_100605643	3300028878	Soil	VSHLRVAGQAGEAGLIPTTDRFGTALSDIVRCRACGHMQLERFPADAVLAEAYGDAASADYVEEEAGQRATARAVLERLE
Ga0307304_101827441	3300028885	Soil	MVETCAACGGEELVSHLRVAGQPGEAGLIPTTDRFGTALSDIVRCRACGHMQLERYPADAVLAEAYGDAASADYV
Ga0307304_104526881	3300028885	Soil	MPACAACGATTLVPHMAVAGGAGEQGLIPTTDRFGSALADIVRCVACGHMQLERFPDEMELAEAYGEAASDDYVEEEAGQRATARIALDRIERHV
Ga0247827_101779121	3300028889	Soil	VSHLRVAGQAGEAGLVPTTDRFGTALSDIVRCRACGHMQLERFPADAMLAEAYGDAASADYVEEEAGQRATARAVLERLERHVGRRALLEL
Ga0302178_105460362	3300030013	Palsa	MHFSDRCAACDAAGLEPHFSVAGEAGPDGLIPSTARFGTALADIVRCSSCGHMQLHPMPDQGTLATGYAAAASDEYVDEEAGQRETARRA
Ga0311353_114748902	3300030399	Palsa	MRVAGEIGPEGLIPSTYRFGSALADIARCPSCGHMQLDPMPSEAMLARAYAAAQSDDYIEEEAGQRATARATLERIEAHLT
Ga0302184_101279961	3300030490	Palsa	MRVAGEIGPEGLIPSTYRFGSALADIARCPSCGHMQLDPMPSEAMLARAYAAAQSDDYIEEEAGQRATARATLERIEAHLTHRGA
Ga0299914_109593081	3300031228	Soil	VSARCAVCGGDQLVEHLAVAGEQGPEGLIPTTDRFGTALSDIVRCRGCTHMQLREIPTQAELEQAYAAAASDDYVEEEAGQRATAR
Ga0299913_101812043	3300031229	Soil	VAAGLQTACAACGGGPLRPHLRVAGEMGSEGLVPTTDRFGTALADIVRCRACGHMQLARMPSDAELSEAYGEAESEDYVEEEAGQRA
Ga0307408_1006097242	3300031548	Rhizosphere	MSHQRTVCRGDGATGPAPPVCCACGGAELAPHLRVAGETGEQGLIPTTDRFGTALADLVRCAACGHAQLDRMPADAELESAYAGAESAAYVDEEAGQR
Ga0307413_116197391	3300031824	Rhizosphere	VAGDAGPQGLIPTTDQYGRALADIVRCERCGHMQLEHMPTDAELGEAYGEAASEDYVEEEAGQRETARRALERIERWTGG
Ga0307412_100705753	3300031911	Rhizosphere	VAGDAGPQGLIPTTDQYGRALADIVRCERCGHMQLEHMPTDAELGEAYGEAASEDYVEEEAGQRETARRALERI
Ga0307409_1021564741	3300031995	Rhizosphere	VCGGDRLLEHLAVAGEQGPEGLIPTTDRFGTALSDIVWCPNCTHMQLSEIPSEAELERAYGEAVSDDYVE
Ga0308173_100929301	3300032074	Soil	MSQERQCAACGGTELRPHLRVAGDMGDQGLIPTTDRFGTALSDIVRCASCGHMQLADMPTDAELESAYTDAASEDYVDEEAGQRETARRMLAR
Ga0326721_108003961	3300032080	Soil	VAGDAGPQGLIPTTDQYGRALADICRCAQCGHMQLERMPSDDELAAAYEVAASEVYVEEEAGQRETARVALEQIERHTGGPG
Ga0334911_048846_1_240	3300034131	Sub-Biocrust Soil	VRLCAACGASGLVLYLKVAGDAGPDGLIPTTDKFGTALADIVRCQNCGHRQVDPMPPDAMLEGAYADAASDDYLEEEAGQ
Ga0334961_006127_1717_1959	3300034143	Sub-Biocrust Soil	VPACAACASTALVLHLKVADARAEDLIPTTDRFGAALGDIVRCPACSHMQLERFPSEAELGEAYGAAASEDYVEEEAGQRA
Ga0372946_0097448_1076_1375	3300034384	Soil	VDSSTCTVCASSDLRPHLQVAGDAGDQGLIPTTDRFGTALSDIVRCGACGHMQLERMPAAAVLAEAYEEAASEDYVGEEAGQRETARVALDRIERYVELG
Ga0334960_063750_3_203	3300034402	Sub-Biocrust Soil	VPHLKVAGDAGPDGLIPTTDRFGTALSDLVRCKSCGHRQTEPMPADAVLESAYADAACDDYVEEEAG
Ga0334905_081839_2_223	3300034687	Soil	MGEEGLIPTTDRYGSALADIERCVACGHMQLDRFPSDAELAGAYAAAASEDYVEEEAGQRATARVALERIERFT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099084

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences