Metagenome / Metatranscriptome Family F098846

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098846
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	74 residues
Representative Sequence	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF
Number of Associated Samples	62
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.90 %
% of genes near scaffold ends (potentially truncated)	28.16 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.029 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (37.864 % of family members)
Environment Ontology (ENVO)	Unclassified (39.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.11% β-sheet: 0.00% Coil/Unstructured: 36.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d1nfva_	1nfv	0.8163
a.25.1.1: Ferritin	d1lkoa1	1lko	0.81508
a.25.1.1: Ferritin	d1j30a_	1j30	0.81234
c.49.2.0: automated matches	d6rdps_	6rdp	0.81001
a.25.1.1: Ferritin	d4cvra_	4cvr	0.80715

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02597	ThiS	63.11
PF03454	MoeA_C	21.36
PF00291	PALP	3.88
PF13340	DUF4096	0.97
PF02910	Succ_DH_flav_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	63.11
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	63.11
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	21.36

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.03 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.51 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	48.54 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	27.18 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	19.42 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	27.18 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	19.42 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	27.18 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	19.42 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	27.18 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	19.42 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	27.18 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	19.42 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	27.18 %
Nitrolancea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea	5.83 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	0.97 %
Unclassified	root	N/A	0.97 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	27.18 %
Nitrolancea hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	5.83 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.97 %
Unclassified	root	N/A	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2110375	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300000833\|JGI12273J12029_10272196	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300002568\|C688J35102_118001474	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300004081\|Ga0063454_100957911	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005329\|Ga0070683_100255114	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300005455\|Ga0070663_101756915	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005562\|Ga0058697_10097614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1213	Open in IMG/M
3300005562\|Ga0058697_10751767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	523	Open in IMG/M
3300006038\|Ga0075365_10685285	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300006038\|Ga0075365_11257985	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006092\|Ga0082021_1034351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	70914	Open in IMG/M
3300006845\|Ga0075421_101513871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	733	Open in IMG/M
3300006845\|Ga0075421_102187278	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300006918\|Ga0079216_10095556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1426	Open in IMG/M
3300007004\|Ga0079218_11694161	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300007790\|Ga0105679_10546794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1442	Open in IMG/M
3300007790\|Ga0105679_10808365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1982	Open in IMG/M
3300009147\|Ga0114129_12934359	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300009789\|Ga0126307_10012610	All Organisms → cellular organisms → Bacteria	6200	Open in IMG/M
3300009789\|Ga0126307_10020439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	4993	Open in IMG/M
3300009789\|Ga0126307_10244201	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300009789\|Ga0126307_10281087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1339	Open in IMG/M
3300009789\|Ga0126307_10794457	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300009789\|Ga0126307_11017554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	670	Open in IMG/M
3300009789\|Ga0126307_11306824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	587	Open in IMG/M
3300009840\|Ga0126313_10018135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	4633	Open in IMG/M
3300009840\|Ga0126313_10055608	All Organisms → cellular organisms → Bacteria	2805	Open in IMG/M
3300009840\|Ga0126313_10323885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	1209	Open in IMG/M
3300009840\|Ga0126313_10831654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	752	Open in IMG/M
3300009840\|Ga0126313_11384966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	582	Open in IMG/M
3300010036\|Ga0126305_10109909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1668	Open in IMG/M
3300010037\|Ga0126304_10036121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	2936	Open in IMG/M
3300010037\|Ga0126304_10950841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	585	Open in IMG/M
3300010038\|Ga0126315_10097017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1685	Open in IMG/M
3300010038\|Ga0126315_10175688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1280	Open in IMG/M
3300010038\|Ga0126315_10656108	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010038\|Ga0126315_10725083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	650	Open in IMG/M
3300010039\|Ga0126309_10105832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1455	Open in IMG/M
3300010039\|Ga0126309_11036086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	553	Open in IMG/M
3300010040\|Ga0126308_10020873	All Organisms → cellular organisms → Bacteria	3530	Open in IMG/M
3300010040\|Ga0126308_10480394	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300010040\|Ga0126308_11299531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	517	Open in IMG/M
3300010041\|Ga0126312_10491737	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300010041\|Ga0126312_10770175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	697	Open in IMG/M
3300010042\|Ga0126314_10368509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1032	Open in IMG/M
3300010044\|Ga0126310_10108886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1694	Open in IMG/M
3300010044\|Ga0126310_10432412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	945	Open in IMG/M
3300010044\|Ga0126310_11496250	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300010045\|Ga0126311_10260339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1291	Open in IMG/M
3300010045\|Ga0126311_10309063	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300010045\|Ga0126311_10392118	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300010045\|Ga0126311_10523308	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300010166\|Ga0126306_10555436	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300010166\|Ga0126306_10573161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	898	Open in IMG/M
3300010166\|Ga0126306_10652693	All Organisms → cellular organisms → Bacteria → Terrabacteria group	841	Open in IMG/M
3300010166\|Ga0126306_10664041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	834	Open in IMG/M
3300010166\|Ga0126306_11145094	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010870\|Ga0102750_10119857	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300010874\|Ga0136264_10122426	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012212\|Ga0150985_100769713	Not Available	509	Open in IMG/M
3300012212\|Ga0150985_102015305	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300012212\|Ga0150985_105450806	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300012212\|Ga0150985_113865629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	1434	Open in IMG/M
3300012212\|Ga0150985_114123156	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012212\|Ga0150985_115821128	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012212\|Ga0150985_119814861	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300012212\|Ga0150985_120402721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	627	Open in IMG/M
3300012469\|Ga0150984_100665785	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300012469\|Ga0150984_101370252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1552	Open in IMG/M
3300012469\|Ga0150984_121086194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	526	Open in IMG/M
3300012680\|Ga0136612_10695756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	514	Open in IMG/M
3300012893\|Ga0157284_10240851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	565	Open in IMG/M
3300012908\|Ga0157286_10281115	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012921\|Ga0164290_1046654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	591	Open in IMG/M
3300014271\|Ga0075326_1219457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	576	Open in IMG/M
3300015077\|Ga0173483_10332946	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300017789\|Ga0136617_10684725	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300018432\|Ga0190275_12302147	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018466\|Ga0190268_10726562	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300018469\|Ga0190270_12859849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	545	Open in IMG/M
3300018476\|Ga0190274_11677979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	729	Open in IMG/M
3300018875\|Ga0193608_1051980	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300018920\|Ga0190273_11356404	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300020070\|Ga0206356_11885406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	982	Open in IMG/M
3300024430\|Ga0196962_10268262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	557	Open in IMG/M
3300026090\|Ga0208912_1073616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	514	Open in IMG/M
3300027909\|Ga0209382_11307141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	734	Open in IMG/M
3300027909\|Ga0209382_11380517	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300028554\|Ga0302047_10228368	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300028592\|Ga0247822_10702961	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300030784\|Ga0102758_10006951	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300030785\|Ga0102757_10777685	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031058\|Ga0308189_10473173	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300031091\|Ga0308201_10058666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	993	Open in IMG/M
3300031092\|Ga0308204_10231185	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031114\|Ga0308187_10310171	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031824\|Ga0307413_11864506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	539	Open in IMG/M
3300031938\|Ga0308175_102253631	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031995\|Ga0307409_100956924	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300031996\|Ga0308176_10789841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	991	Open in IMG/M
3300032004\|Ga0307414_11774578	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300032159\|Ga0268251_10096165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1049	Open in IMG/M
3300034391\|Ga0334917_109200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.76%
Host-Associated	Host-Associated	24.27%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.82%
Plants	Host-Associated → Plants	24.27%
Aquatic	Environmental → Aquatic	1.94%
Wastewater	Engineered → Wastewater	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.77%
Phylloplane	Host-Associated → Plants → Phylloplane	2.91%
Freshwater	Environmental → Aquatic → Freshwater	1.94%
Roots	Host-Associated → Plants → Roots	1.94%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.77%
Sand	Environmental → Terrestrial → Soil → Sand	4.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Loam	Environmental → Terrestrial → Soil → Loam	2.91%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.91%
Ice	Environmental → Aquatic → Freshwater → Ice	1.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.94%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.94%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.97%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.91%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.97%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	37.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.91%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.91%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.94%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Contaminated Culture	Environmental → Terrestrial → Soil → Unclassified → Desert → Contaminated Culture	0.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.97%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000833	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate C) 0C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010870	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010874	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 3)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012921	Contaminated culture microbial community from soil near Moab, Utah, USA - Microcoleus steenstrupii SON62 (Illumina Assembly)	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300026090	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300030784	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 6A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21103752	3300000033	Soil	MGTGEQKFGVPDIVYDIIQTVGNLLQGEEKLLEYARDAENAGDTESATAFRTVAEGNRAAAQTLLKRLRAHLNEM*
JGI12273J12029_102721961	3300000833	Soil	MEPGTDRYGVPNIVYDIIQTVGNLLQGQEKLQEYAADADQAGDVEAATAFRTIAEANRIGAQVLLKQLRFHLNEHQD*
C688J35102_1180014742	3300002568	Soil	MEPGELKYGVPDMVYNLITSVGNLLQGEEKLKEYALDAEKVGDSEAATVFRTVAEGNRAAAQTLLR
Ga0063454_1009579111	3300004081	Soil	GEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0070683_1002551143	3300005329	Corn Rhizosphere	KYGVPNIVYDIIQTVGNLLQGEEKMKEYAADAERAGDTESATAFRTLAEGNRAGANTLLKQLKRHLNEM*
Ga0070663_1017569151	3300005455	Corn Rhizosphere	MEPGEIKYGVPNIVYDIIQTVGNLLQGEEKMKEYAADAERAGDTESATAFRTLAEGNRAGANTLLKQLKRHLNEM*
Ga0058697_100976142	3300005562	Agave	VEPGELKYGVPDMVYNLITTVGNLLQGEEKLKEYALDAEKVGDSEAATVFRTVAEGNRVAAQTLLRRLKSYLNEL*
Ga0058697_107517671	3300005562	Agave	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0075365_106852852	3300006038	Populus Endosphere	MEPGTDRYGVPDVVYDIIQTVGNLLQGQEKLQEYAGDADKVGDDEAAAAFRAIAEANRVGARVLLGRLRFHLNEHQ
Ga0075365_112579851	3300006038	Populus Endosphere	MEPGTDRYGVPDVVYDIIQTVGNLLQGQEKLQEYAVDADRVGDDEAATAFRTLADANRVGARVLLGRLRFHLNEHQD*
Ga0082021_103435115	3300006092	Wastewater Treatment Plant	MEPGTRRYGVSDIVYDIVQTVGNLLQGQEKLQEYAGDAERAGDQEAAAAFRTIAEANRVGAQVLLGRLRSHLNEEMG*
Ga0075421_1015138712	3300006845	Populus Rhizosphere	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0075421_1021872781	3300006845	Populus Rhizosphere	MGAGEQKFGVPNIVYDIITTVGNLLQGEEKLIEYAKDAEEAGDADSATVFRTVAEGNRAAAQTLLKRLRAHLNEM*
Ga0079216_100955563	3300006918	Agricultural Soil	MFAVLTEGTAMEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMTEYAGDAEEAGDADAATVFRTVAEGNRIAAQALLKRLKVHLSDF*
Ga0079218_116941611	3300007004	Agricultural Soil	QTVGNLLQGVEKMTEYAGDAEEAGDADAATVFRTVAEGNRIAAQALLKRLKVHLSDF*
Ga0105679_105467942	3300007790	Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0105679_108083652	3300007790	Soil	MKYGVPNVVYDIIQTVGNLLQGVEKMMEYAADADQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0114129_129343591	3300009147	Populus Rhizosphere	LKYGVPDMVYNLITSVGNLLQGEEKLKEYALDAEKVGDTEAATVFRTVAEGNRAAALTLLRRLKYHLNDL*
Ga0126307_100126104	3300009789	Serpentine Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126307_100204394	3300009789	Serpentine Soil	MKYGVPNIVYDMIQTVGNLLQGVEKMTEYAGDAEAAGDPDAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126307_102442011	3300009789	Serpentine Soil	REGIAMEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDGDAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126307_102810872	3300009789	Serpentine Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMLEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126307_107944573	3300009789	Serpentine Soil	VPNVVYDIIQTVGNLLQGVEKMTEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126307_110175541	3300009789	Serpentine Soil	MEPGELKYGVPNIVYDIVQTVGNLLQGVEKMSEYASDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126307_113068242	3300009789	Serpentine Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126313_100181353	3300009840	Serpentine Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDGDAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126313_100556083	3300009840	Serpentine Soil	MEPGQMKYGVPNIVYDMIQTVGNLLQGVEKMTEYAGDAEAAGDPDAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126313_103238852	3300009840	Serpentine Soil	MEPGEMKYGVPDIVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126313_108316542	3300009840	Serpentine Soil	MKYGVPNIVYDMIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTIAESNRVAAQALLKRLKVHLNDF*
Ga0126313_113849661	3300009840	Serpentine Soil	MEAGEMKYGVPNIVYDIVQTVGNLLQGVEKMMEYAEDAENAGDAEAATVFRTVADGNRVAAQALLKRLNAHLNAL*
Ga0126305_101099092	3300010036	Serpentine Soil	MEPGELKYGVPNVVYDIIQTVGNLLQGVEKMMEYAEDAENAGDAEAATVFRTVADGNRVASQALLRRLNAHLNNL*
Ga0126304_100361212	3300010037	Serpentine Soil	MKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDGDAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126304_109508411	3300010037	Serpentine Soil	MEPGEMKYGVPDIVYDIIQTAGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKR
Ga0126315_100970172	3300010038	Serpentine Soil	MEPGEMKYGVPNIVYDMIQTVGNLLQGVEKMTEYAGDAEAAGDPDAATVFRTVAEGNRVAAQALLKRLKVQLNNF*
Ga0126315_101756882	3300010038	Serpentine Soil	MSCRTIAAIGEEIKLEPGAMKYGVPNIVYDMIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTIAESNRVAAQALLKRLKVHLSDF*
Ga0126315_106561081	3300010038	Serpentine Soil	LQGVEKMMEYAGDAEADGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126315_107250832	3300010038	Serpentine Soil	MEPGEMKYGVPDIVYDIIQTAGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVQLSDF*
Ga0126309_101058322	3300010039	Serpentine Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126309_110360862	3300010039	Serpentine Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADASTVFRTVAEGNRVAAQALLKRLKVHLNEF*
Ga0126308_100208733	3300010040	Serpentine Soil	MKYGVPNIVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126308_104803941	3300010040	Serpentine Soil	MKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126308_112995312	3300010040	Serpentine Soil	MKYGVPNIVYDMIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTIAESNRVAAQALLKRLKVHLSDF*
Ga0126312_104917371	3300010041	Serpentine Soil	MPAMREEIAMEPGQMKYGVPNVVYDIIQTVGNLLQGVEKMLEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126312_107701752	3300010041	Serpentine Soil	MEPGEMKYGVTNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126314_103685092	3300010042	Serpentine Soil	MPAMREETAMEPGQMKYGVPNVVYDIIQTVGNLLQGVEKMLEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126310_101088863	3300010044	Serpentine Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126310_104324122	3300010044	Serpentine Soil	MKYGVPNIVYDIIQTVGNLLQGVEKMIEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126310_114962502	3300010044	Serpentine Soil	KYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDPDAATVFRTVAEGNRVAAQALLKRLKVQLNNF*
Ga0126311_102603392	3300010045	Serpentine Soil	MREETAMEPGQMKYGVPNVVYDIIQTVGNLLQGVEKMLEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126311_103090631	3300010045	Serpentine Soil	VYDMIQSVGNLLQGVEKMLEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLRRLKAHLNDF*
Ga0126311_103921182	3300010045	Serpentine Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTVAESNRVAAQALLKRLKVHLNDF*
Ga0126311_105233081	3300010045	Serpentine Soil	TMEPGQMKYGVPNIVYDIIQTVGNLLQGVEKMLEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126306_105554361	3300010166	Serpentine Soil	GEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0126306_105731611	3300010166	Serpentine Soil	MEPGQMKYGVPNIVYDMIQTVGNLLQGVEKMTEYAGDAEAAGDPDAATVFRTVAEGNRVAAQAMLKRLKVHLNDF*
Ga0126306_106526932	3300010166	Serpentine Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMMEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLTDF*
Ga0126306_106640412	3300010166	Serpentine Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMTEYAGDAEEAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0126306_111450942	3300010166	Serpentine Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDGEQAGDADAATAFGTLAEGTGVAAQALLKRLKVHLSDF*
Ga0102750_101198571	3300010870	Soil	AMEPGTERYGVPDIVYDIVQTVGNLLQGQEKLQEYAGDAASAGDEEAATAFRTIAEANRVGAQVLLRRLRFHLNEHQD*
Ga0136264_101224261	3300010874	Soil	AMEPGTERYGVPDIVYDIVQTVGNLLQGQEKLQEYAGDADSAGDEEAATAFRTIAEANRVGAQVLLRRLRFHLNEHQD*
Ga0150985_1007697131	3300012212	Avena Fatua Rhizosphere	MERGEGRYGVSDIVYDIITTTANLLQGEEKLREYAGDADSAGDAECATAFRTVAEANRVAAQVLLRRLKAHLNEG*
Ga0150985_1020153052	3300012212	Avena Fatua Rhizosphere	VEPGELKYGVPDMVYNLITTVGNLLQGEEKLKEYAIDAEKVGDTEVATVLRTVAEGNRVAAQALLRRLKYHLNDF*
Ga0150985_1054508062	3300012212	Avena Fatua Rhizosphere	GVSDMVYNLITSVGNLLQGEEKLKEYALDAEKVGDTEAATVFRTVAEGNRNAALALLRRLKFHLNDL*
Ga0150985_1138656292	3300012212	Avena Fatua Rhizosphere	MEAGDMKYGVPNIVYDIVQTVGNLLQGVEKMMEYAEDAENAGDAEAATVFRTVADGNRVAAQALLKRLNAHLNAL*
Ga0150985_1141231562	3300012212	Avena Fatua Rhizosphere	VYNLITTVGNLLQGEEKLKEYAIDAEKVGDTEVATVLRTVAEGNRVAAQALLRRLKYHLSDF*
Ga0150985_1158211282	3300012212	Avena Fatua Rhizosphere	MKYGVPNIVYDIVQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0150985_1198148611	3300012212	Avena Fatua Rhizosphere	GRQGKEATMEPGELKYGVPDMVYNLITSVGNLLQGEEKLKEYALDAEKVGDSEAATVFRTVAEGNRAAAQTLLRRLKYHLNDL*
Ga0150985_1204027212	3300012212	Avena Fatua Rhizosphere	MEPGEMKYGVPNIVYDIIQTAGNLLQGVEKMTEYARDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0150984_1006657852	3300012469	Avena Fatua Rhizosphere	MKYGVPNIVYDIVQTVGNLLQGVEKMTEYAADAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0150984_1013702522	3300012469	Avena Fatua Rhizosphere	VEPGDLKYGVPDMVYNLITTVGNLLQGEEKLKEYAIDAEKVGDTEVATVLRTVAEGNRVAAQTLLRRLKYHLSDF*
Ga0150984_1210861941	3300012469	Avena Fatua Rhizosphere	VEPGELKYGVPDMVYNLITTVANLLQGEEKLKEYALDAEKAGDTEAATVFRTIAEGNRAAAQTLLRRLKHHLSDY*
Ga0136612_106957561	3300012680	Polar Desert Sand	VEPGELKYGVPNLVYDIILTVGNLLQGVEKMMEYAEDADKAGDPDAATVFRTVAEGNRVAAQALLKRLKAHLNDI*
Ga0157284_102408511	3300012893	Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDGDAATVFRTVAEGNRVAAQALLK
Ga0157286_102811152	3300012908	Soil	VGNLLQGVEKMTEYAGDAEAAGDSDAATVFRTVAEGNRVAAQALLKRLKVHLNDF*
Ga0164290_10466541	3300012921	Contaminated Culture	MEPGTERYGVSDIVYDIIQTVGNLLQGQEKLQEYAVDADRAGDQEAAAAFRTIAEANRAGAQVLLGRLRVHLNEHQDYKD*
Ga0075326_12194572	3300014271	Natural And Restored Wetlands	MGAGEQKFGVPNIVYDIVTTVGNLLQGEEKLIEYAKDAEDAGDAESATVFRTVAEGNRAAAQTLLKRLRVHLNEM*
Ga0173483_103329461	3300015077	Soil	IIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF*
Ga0136617_106847252	3300017789	Polar Desert Sand	MDTGKSKYGVPNTVYDIIQTVGNLLQGQEKLMEYAEDAERDGDAESATVFRTVAESNRVAAQALLKRLKAHLNEI
Ga0190275_123021471	3300018432	Soil	LLQGVEKMIEYAQEAEAAGDPEAANVFRTVAEGNRVAARALLGRLKGHLSDF
Ga0190268_107265621	3300018466	Soil	MEPGEMKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF
Ga0190270_128598491	3300018469	Soil	MEPGELKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLTDF
Ga0190274_116779792	3300018476	Soil	MEPGELKYGVPNVVYDIIQTVGNLLQGVEKMMEYAEDAENAGDAEAATVFRTVADGNRVASQALLRRLNAHLNNL
Ga0193608_10519802	3300018875	Soil	MEPGELKYGVPNIVYDIVQTVGNLLQGVEKMLEYAQDAEDAGDAEAATVFRTVADGNRVAAQALLRRLNAHLNAL
Ga0190273_113564042	3300018920	Soil	MEPGTSRYGVPDIVYDIVQTVGNLLQGQEKLQEYAVDADRVGDEDAASAFRAIAEANRVGAQVLLGRLRVHLNEGQE
Ga0206356_118854062	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGEIKYGVPNIVYDIIQTVGNLLQGEEKMKEYAADAERAGDTESATAFRTLAEGNRAGANTLLKQLKRHLNEM
Ga0196962_102682621	3300024430	Soil	MKYGVPNVVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF
Ga0208912_10736161	3300026090	Natural And Restored Wetlands	MGAGEQKFGVPNIVYDIVTTVGNLLQGEEKLIEYAKDAEDAGDAESATVFRTVAEGNRAAAQTLLKRLRVHLNEM
Ga0209382_113071412	3300027909	Populus Rhizosphere	MGAGEQKFGVPNIVYDIITTVGNLLQGEEKLIEYAKDAEEAGDADSATVFRTVAEGNRAAAQTLLKRLRAHLNEM
Ga0209382_113805172	3300027909	Populus Rhizosphere	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMMEYAGDAEQAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF
Ga0302047_102283681	3300028554	Soil	AMEPGTERYGVPDIVYDIVQTVGNLLQGQEKLQEYAGDAASAGDEEAATAFRTIAEANRVGAQVLLRRLRFHLNEHQD
Ga0247822_107029611	3300028592	Soil	TGEQKFGVPDIVYDIIQTVGNLLQGEEKLLEYARDAENAGDTESATAFRTVAEGNRAAAQTLLKRLRAHLNEM
Ga0102758_100069512	3300030784	Soil	EPGTERYGVPDIVYDIVQTVGNLLQGQEKLQEYAGDAASAGDEEAATAFRTIAEANRVGAQVLLRRLRFHLNEHQD
Ga0102757_107776852	3300030785	Soil	IGTADRLPPKTVRYPGKETPVEPGELKYGVPDMVYNLITTVGNLLQGEEKLKEYALDAEKVGDPEVATVFRTVAEGNRVAAQTLLRRLKYYLNDL
Ga0308189_104731731	3300031058	Soil	MEPGTERYGVPDIVYDIIQTVGNLLQGQEKLQEYAKDADRVGDTEAATAFRTIGEANRMGAQVLLRRLRAHLNEVQD
Ga0308201_100586662	3300031091	Soil	MEPGEVKYGVPNIVYDIIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF
Ga0308204_102311852	3300031092	Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLNDF
Ga0308187_103101712	3300031114	Soil	PPKTVRYSGKETPVEPGELKYGVPDMVYNLITTVGNLLQGEEKLKEYALDAEKVGDPEVATVFRTVAEGNRVAAQTLLRRLKYYLNDL
Ga0307413_118645061	3300031824	Rhizosphere	MEPGTNRYGVPDIVYDIVQTVGNLLQGQEKLQEYAVDADRVGDAEAAAAFRSIAEANRVGAQVLLGRLRAHLNEGQG
Ga0308175_1022536312	3300031938	Soil	MKYGVPNVVYDIIQTVGNLLQGVEKMTEYAAEAEAAGDADAATVFRTVAEGNRVAAQALLKRLKAHLNDF
Ga0307409_1009569241	3300031995	Rhizosphere	TVGNLLQGVEKMLEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF
Ga0308176_107898412	3300031996	Soil	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAADAEAAGDADAATVFRTVAEGNRVAAQALLKRLKAHLNDF
Ga0307414_117745781	3300032004	Rhizosphere	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMTEYAGDAEAAGDGDAATVFRTVAEGNRVAAQALLKRLKVHLNDF
Ga0268251_100961652	3300032159	Agave	MEPGEMKYGVPNVVYDIIQTVGNLLQGVEKMMEYAGDAEAAGDADAATVFRTVAEGNRVAAQALLKRLKVHLSDF
Ga0334917_109200_79_312	3300034391	Hypolithic Biocrust	MEPGTDRYGVPDIVYDIVQTVGNLLQGQEKLQEYAVDADRAGDDEAATAFRTIAEANRVGAQVLLRRLRFHLNDHQD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098846

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences