Metagenome / Metatranscriptome Family F098798

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098798
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	134 residues
Representative Sequence	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD
Number of Associated Samples	76
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.98 %
% of genes near scaffold ends (potentially truncated)	33.98 %
% of genes from short scaffolds (< 2000 bps)	78.64 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.252 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (12.621 % of family members)
Environment Ontology (ENVO)	Unclassified (36.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.544 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.28% β-sheet: 0.00% Coil/Unstructured: 37.72%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF10588	NADH-G_4Fe-4S_3	43.69
PF13510	Fer2_4	14.56
PF01245	Ribosomal_L19	10.68
PF00111	Fer2	9.71
PF00253	Ribosomal_S14	0.97
PF00146	NADHdh	0.97
PF00203	Ribosomal_S19	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0335	Ribosomal protein L19	Translation, ribosomal structure and biogenesis [J]	10.68
COG0185	Ribosomal protein S19	Translation, ribosomal structure and biogenesis [J]	0.97
COG0199	Ribosomal protein S14	Translation, ribosomal structure and biogenesis [J]	0.97
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.97
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.11 %
Unclassified	root	N/A	36.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.11 %
Unclassified	root	N/A	36.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.25 %
Unclassified	root	N/A	36.89 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.28 %
Unclassified	root	N/A	36.89 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.31 %
Unclassified	root	N/A	36.89 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.88 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.97 %

Name	Rank	Taxonomy	Distribution
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	55.34 %
Unclassified	root	N/A	36.89 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.88 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	54.37 %
Unclassified	root	N/A	36.89 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.88 %
Anaplasmataceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae	0.97 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.97 %

Name	Rank	Taxonomy	Distribution
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	54.37 %
Unclassified	root	N/A	36.89 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.88 %
Ehrlichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Ehrlichia	0.97 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001078\|JGI12640J13246_100727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	592	Open in IMG/M
3300001088\|JGI12665J13242_100511	Not Available	790	Open in IMG/M
3300001152\|JGI12699J13341_101485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	901	Open in IMG/M
3300001867\|JGI12627J18819_10055469	Not Available	1652	Open in IMG/M
3300002245\|JGIcombinedJ26739_100114762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2532	Open in IMG/M
3300003162\|Ga0006778J45830_1004594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1940	Open in IMG/M
3300003322\|rootL2_10088624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1092	Open in IMG/M
3300003324\|soilH2_10229246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1429	Open in IMG/M
3300003324\|soilH2_10229247	Not Available	1161	Open in IMG/M
3300003693\|Ga0032354_1073548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1233	Open in IMG/M
3300005459\|Ga0068867_101275126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	677	Open in IMG/M
3300005548\|Ga0070665_100160007	Not Available	2253	Open in IMG/M
3300005548\|Ga0070665_100272179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1695	Open in IMG/M
3300005548\|Ga0070665_101213332	Not Available	765	Open in IMG/M
3300005577\|Ga0068857_101325165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	699	Open in IMG/M
3300005578\|Ga0068854_100253997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1405	Open in IMG/M
3300005602\|Ga0070762_10201177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1219	Open in IMG/M
3300005617\|Ga0068859_100739066	Not Available	1073	Open in IMG/M
3300005719\|Ga0068861_100261440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1482	Open in IMG/M
3300005843\|Ga0068860_100517738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Ehrlichia	1193	Open in IMG/M
3300005921\|Ga0070766_11214502	Not Available	522	Open in IMG/M
3300006881\|Ga0068865_102112845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	512	Open in IMG/M
3300009176\|Ga0105242_10318186	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1426	Open in IMG/M
3300009545\|Ga0105237_10042417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	4587	Open in IMG/M
3300010038\|Ga0126315_10061202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2073	Open in IMG/M
3300010397\|Ga0134124_10000988	Not Available	22826	Open in IMG/M
3300010400\|Ga0134122_13098223	Not Available	520	Open in IMG/M
3300010401\|Ga0134121_10261429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1519	Open in IMG/M
3300011120\|Ga0150983_15210232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	730	Open in IMG/M
3300012212\|Ga0150985_103232095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1352	Open in IMG/M
3300012212\|Ga0150985_104031017	Not Available	1160	Open in IMG/M
3300012212\|Ga0150985_105613497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1771	Open in IMG/M
3300012469\|Ga0150984_102755086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	966	Open in IMG/M
3300012469\|Ga0150984_107619162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	951	Open in IMG/M
3300012469\|Ga0150984_109060559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	594	Open in IMG/M
3300012469\|Ga0150984_111608625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1037	Open in IMG/M
3300012469\|Ga0150984_114789143	Not Available	1519	Open in IMG/M
3300012469\|Ga0150984_115338304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1594	Open in IMG/M
3300012469\|Ga0150984_116150819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1488	Open in IMG/M
3300012469\|Ga0150984_122289859	Not Available	1680	Open in IMG/M
3300012469\|Ga0150984_123111479	Not Available	1382	Open in IMG/M
3300012930\|Ga0137407_10462762	Not Available	1181	Open in IMG/M
3300012943\|Ga0164241_11404737	Not Available	514	Open in IMG/M
3300013296\|Ga0157374_10623468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1089	Open in IMG/M
3300013296\|Ga0157374_12562627	Not Available	537	Open in IMG/M
3300013297\|Ga0157378_10116632	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2455	Open in IMG/M
3300013297\|Ga0157378_10125144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2374	Open in IMG/M
3300013306\|Ga0163162_11879584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	685	Open in IMG/M
3300013308\|Ga0157375_13804645	Not Available	501	Open in IMG/M
3300014488\|Ga0182001_10217114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	713	Open in IMG/M
3300014745\|Ga0157377_11379181	Not Available	555	Open in IMG/M
3300014968\|Ga0157379_10704839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	948	Open in IMG/M
3300015371\|Ga0132258_10579042	Not Available	2816	Open in IMG/M
3300015371\|Ga0132258_11268875	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1862	Open in IMG/M
3300015373\|Ga0132257_103001794	Not Available	615	Open in IMG/M
3300015374\|Ga0132255_101046968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1225	Open in IMG/M
3300018432\|Ga0190275_10001000	Not Available	22001	Open in IMG/M
3300019260\|Ga0181506_1247332	Not Available	1487	Open in IMG/M
3300020069\|Ga0197907_11458362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1201	Open in IMG/M
3300020154\|Ga0196965_1000855	Not Available	14159	Open in IMG/M
3300020154\|Ga0196965_1015894	Not Available	2049	Open in IMG/M
3300020154\|Ga0196965_1024853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1593	Open in IMG/M
3300021358\|Ga0213873_10003007	Not Available	2993	Open in IMG/M
3300023268\|Ga0247765_1019567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1459	Open in IMG/M
3300024288\|Ga0179589_10253831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	782	Open in IMG/M
3300025914\|Ga0207671_10056129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2918	Open in IMG/M
3300025934\|Ga0207686_11024789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	670	Open in IMG/M
3300026116\|Ga0207674_10956155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	825	Open in IMG/M
3300026118\|Ga0207675_100247176	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1725	Open in IMG/M
3300026911\|Ga0209620_1000097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	4122	Open in IMG/M
3300026911\|Ga0209620_1003727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1156	Open in IMG/M
3300027037\|Ga0209005_1000610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3985	Open in IMG/M
3300027058\|Ga0209111_1010914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	997	Open in IMG/M
3300027307\|Ga0209327_1001180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2497	Open in IMG/M
3300027619\|Ga0209330_1009191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2207	Open in IMG/M
3300027895\|Ga0209624_10276646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1117	Open in IMG/M
3300028379\|Ga0268266_10101740	Not Available	2533	Open in IMG/M
3300028379\|Ga0268266_10316089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1460	Open in IMG/M
3300028381\|Ga0268264_11571939	Not Available	668	Open in IMG/M
3300030575\|Ga0210288_1017105	All Organisms → cellular organisms → Eukaryota	1087	Open in IMG/M
3300030588\|Ga0210283_1644328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	743	Open in IMG/M
3300030615\|Ga0257185_10349155	Not Available	548	Open in IMG/M
3300030626\|Ga0210291_11205288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	747	Open in IMG/M
3300030738\|Ga0265462_10183435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1122	Open in IMG/M
3300030740\|Ga0265460_11482142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	675	Open in IMG/M
3300030740\|Ga0265460_12901946	Not Available	515	Open in IMG/M
3300030779\|Ga0075378_10017489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	743	Open in IMG/M
3300030784\|Ga0102758_10001522	Not Available	777	Open in IMG/M
3300030784\|Ga0102758_11080741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1042	Open in IMG/M
3300030790\|Ga0138304_1329137	Not Available	719	Open in IMG/M
3300030847\|Ga0075405_12048350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	771	Open in IMG/M
3300031057\|Ga0170834_102640819	Not Available	719	Open in IMG/M
3300031057\|Ga0170834_107314795	Not Available	507	Open in IMG/M
3300031057\|Ga0170834_108135404	Not Available	557	Open in IMG/M
3300031057\|Ga0170834_111982327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	800	Open in IMG/M
3300031231\|Ga0170824_101180591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	792	Open in IMG/M
3300031231\|Ga0170824_122866886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	809	Open in IMG/M
3300031236\|Ga0302324_102652374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	607	Open in IMG/M
3300031716\|Ga0310813_10902727	Not Available	801	Open in IMG/M
3300031731\|Ga0307405_10000051	Not Available	60690	Open in IMG/M
3300031901\|Ga0307406_10044723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.49%
Host-Associated	Host-Associated	49.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.51%
Plants	Host-Associated → Plants	48.54%
Aquatic	Environmental → Aquatic	0.97%
Human	Host-Associated → Human	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.48%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Peat	Environmental → Terrestrial → Peat	0.97%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.97%
Digestive System	Host-Associated → Human → Digestive System	0.97%
Rhizome	Host-Associated → Plants → Rhizome	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.50%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.80%
Sand	Environmental → Terrestrial → Soil → Sand	2.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.97%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.97%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.80%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.97%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.97%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	11.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.94%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.97%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.97%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001078	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2	Environmental	Open in IMG/M
3300001088	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2	Environmental	Open in IMG/M
3300001152	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003693	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020154	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027037	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030575	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE050SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030588	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE011SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030615	Metatranscriptome of plant litter fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP1-LITTER (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030779	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030784	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 6A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030790	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12640J13246_1007271	3300001078	Forest Soil	FTINNNLNKQAKLTPAFYIKQRKNRKTIKGSKKYKIFLVGDIIEFLFVFKSVPLLYSGICIAVRKKSFIMPDVTLILRNIIMKVAIEITVSFFYNRIYKLRFLDYKRKFYFYNKNKIFFIRKRLNKESRVGD*
JGI12665J13242_1005112	3300001088	Forest Soil	MENIYNYFTINNNLNKQAKLTPAFYIKQRKNRKTIKGSKKYKIFLVGDIIEFLFVFKSVPLLYSGICIAVRKKSFIMPDVTLILRNIIMKVAIEITVSFFYNRIYKLRFLDYKRKFYFYNKNKIFFIRKRLNKESRVGD*
JGI12699J13341_1014852	3300001152	Forest Soil	MNNNIYNYFKIEDLSERYKKLTPAFYIKQRKNRKNIKGSKKYKKFLVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD*
JGI12627J18819_100554693	3300001867	Forest Soil	MEDFYNYFNKITLLEKSSELTPAFFIKQRKNRKFIKGSKKYKIFEVGDIIEFLFVYKSVPLLYSGICIAIRRKSFLVPDVILILRNIIMRVAVEVIVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD*
JGIcombinedJ26739_1001147622	3300002245	Forest Soil	MQNIYTYFNKEIHQNKLTKLTPAFYIKQRKNRAFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD*
Ga0006778J45830_10045943	3300003162	Avena Fatua Rhizosphere	MNNNYFRIQDNLERQYKLTPAFYIKQRKNRNYIKGSKKYKKFLVGDIIEFLFIFKSVPLLYSGICIAIKRKSFLVPDVTLILRNVIMKVAIEITVSFFYNRLYKLKFLDYKRKFYFFNKNKIFYIRKRLNKESRIGD*
rootL2_100886242	3300003322	Sugarcane Root And Bulk Soil	MKEISYNYFKIQDVLDRKYKLTPAFFIKQRKNRNFIKGSKKYKKFVVGDILEFLFVFKSVPLLYSGICIAIRKKSFIVPDVVLILRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFHSYNKNRIFFIRKR*
soilH2_102292461	3300003324	Sugarcane Root And Bulk Soil	MKEISYNYFKIHNVLDREYKLTPAFFIKQRKNRKLIKGSKKYRKFVVGDIVEFLFVFKSVPLLYSGICIAIRKKSFIVPDVVLILRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFHSYNKNRIFFIRKRLNKESRVGD*
soilH2_102292472	3300003324	Sugarcane Root And Bulk Soil	MKNFFEYYYIYNLLNSQLKLTPTFYIKQRKNRSFIKGSNKYKKFVVGDIVEFLFVFKSVPLLYSGICIAVRKKSFLMPDVTLILRNIIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFIRQRINKESRIKV*
Ga0032354_10735482	3300003693	Avena Fatua Rhizosphere	MYIYNYFKIDDLTERYKKLTPAFYIKQRKNRTNIKGSKKYKKFLVGDIIEFLFIFKSVPLLYSGICIAIKKKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD*
Ga0068867_1012751261	3300005459	Miscanthus Rhizosphere	NKIKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD*
Ga0070665_1001600072	3300005548	Switchgrass Rhizosphere	MKNVYNYFNMTIPLERNIKQMPSFYIKQRKNRKFIKGSKKYKVFSVGDIIEFLFVYKSVPLLYSGICIAIKYKSFLIPDVTLILRNIIMKVVVEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRISV*
Ga0070665_1002721792	3300005548	Switchgrass Rhizosphere	MYNIYNYFNISNLLERKNRLTPAFYIKQRKNRKFIKGSKKYKIFTVGDIIEFLFVFKSVPLLFSGICIAIKKKSFLVPDVTLILRNVIMKTAIEVTVSYFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD*
Ga0070665_1012133322	3300005548	Switchgrass Rhizosphere	LENIYTYFNLKELVSTHIKYTPAFYIKQRKNRNLIKGSKKYKNFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFLVPDVTLILRNIIMKVVIEVTVSFFYNRIYKLKFLDYKRKIYFFNKNKMFFIRKRLNIESRVGD*
Ga0068857_1013251652	3300005577	Corn Rhizosphere	MMVENLNNYFRIQNTLERKYKLTPAYFIKQRKNRNFIKGSKKYKKFVVGDIVEFLFVFKSVPLLYSGICIAIRRKSFIIPDVILILRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFYNKNKIFFIRKRLNKESRVGDYT*
Ga0068854_1002539971	3300005578	Corn Rhizosphere	FNISNLLERKNRLTPAFYIKQRKNRKFIKGSKKYKIFTVGDIIEFLFVFKSVPLLFSGICIAIKKKSFLVPDVTLILRNVIMKTAIEVTVSYFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD*
Ga0070762_102011772	3300005602	Soil	MQNIYTYFNKEMHQNKLTKLTPAFYIKQRKNRAFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD*
Ga0068859_1007390662	3300005617	Switchgrass Rhizosphere	MNIYNYFKIDDLTERYKKLTPAFYIKQRKNRKNIKGSNKYKKFLVGDIIEFLFVFKSVPLLYSGICIAIRKKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD*
Ga0068861_1002614402	3300005719	Switchgrass Rhizosphere	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDVIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD*
Ga0068860_1005177381	3300005843	Switchgrass Rhizosphere	LTPAFFIKQRKNRNYIKGSKKYKIFVVGDVIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD
Ga0070766_112145021	3300005921	Soil	QNKLTKLTPAFYIKQRKNRAFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD*
Ga0068865_1021128451	3300006881	Miscanthus Rhizosphere	YIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD*
Ga0105242_103181863	3300009176	Miscanthus Rhizosphere	KDNLTEKYNKLTPAFYIKQRKNRITIKGSKKYKKFLVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRIGD*
Ga0105237_100424177	3300009545	Corn Rhizosphere	MYNYFNISNLLERKNRLTPAFYIKQRKNRKFIKGSKKYKIFTVGDIIEFLFVFKSVPLLFSGICIAIKKKSFLVPDVTLILRNVIMKTAIEVTVSYFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD*
Ga0126315_100612022	3300010038	Serpentine Soil	LKDLYTYFDSKALISKQTTYTPAFYIKQRKNRNLIKGSKKYKKFVVGDIIEFLFLFKSVPLLYSGICIAIRKKSFLVPDVTLILRNIIMKVVIEVTVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNNESRVGD*
Ga0134124_100009887	3300010397	Terrestrial Soil	MNIYNYFKIDDLTERYKKLTPAFYIKQRKNRKNIKGSNKYKKFLVGDIIEFLFVFKSVPLLYSGICIAIRKKSFLVPDVTLIIRNIIMKVAIEVTVSFFYNRLYKLKFLDYKRKFFFFNKNKIFFLRKRLNRESKIGD*
Ga0134122_130982231	3300010400	Terrestrial Soil	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDVIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLKKRLNRESRLGD*
Ga0134121_102614291	3300010401	Terrestrial Soil	TPAFYIKQRKNRTFIKGSKKYKIFTVGDIIEFLYIYKSVPLLFSCICIAVRKKSFIVPNTTIILRNIIMKIGIEITVSFFFNRIYKLKFLDYKRKIFFFNKNKLYFIRKRLNRESQVGD*
Ga0150983_152102321	3300011120	Forest Soil	QRKNRAFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD*
Ga0150985_1032320951	3300012212	Avena Fatua Rhizosphere	ICKYNLKIMQFYNYFNVNIYSDLSYKLTPAFYIKQRKNRNYIKGSKKYKTFLVGDIIEFVFVYKSVPLLYSGICMAIRKKNFLVPDVTLILRNIIMRIAIEVTVSFFYNRVYKLKFLDYKRKFYFFKKNKIFFLRKRLNRESKISD*
Ga0150985_1040310171	3300012212	Avena Fatua Rhizosphere	RSFFLYIKQRKNRALIKGSAKYKIFLVGDIIEFLFIFKSVPLLYSGICIAIRKKAFLVPDVTLILRNIIMKVAVEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD
Ga0150985_1056134974	3300012212	Avena Fatua Rhizosphere	MNIYNYFKIDDLTERYKKLTPAFYIKQRKNRKNIKGSKKYKKFVVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKIAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRIGD*
Ga0150984_1027550862	3300012469	Avena Fatua Rhizosphere	MQFYNYFNVNIYSDLSYKLTPAFYIKQRKNRNYIKGSKKYKTFLVGDIIEFVFVYKSVPLLYSGICMAIRKKNFLVPDVTLILRNIIMRIAIEVTVSFFYNRVYKLKFLDYKRKFFFFKKNKIFFLRKRLNRESKISD*
Ga0150984_1043703341	3300012469	Avena Fatua Rhizosphere	KYKIFVVGDVIEFLFIFRSVPLLYSGLCIAIRKKAFLVPDVTLILRNIIMRVAVEITVSFFYNRIYKLKFLDYKRKFFFYNKNKIFFIRKRLNRESRIGD*
Ga0150984_1076191623	3300012469	Avena Fatua Rhizosphere	MDNNIYNYFKIDNLLEKNKKLTPAFYIKQRKNRKNIKGSNKYKKFVVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFFFFNKNKIFFLRKRLNRESKIGD*
Ga0150984_1090605592	3300012469	Avena Fatua Rhizosphere	EKNKKLTPAFYIKQRKNRKNIKGSNKYKKFVVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD*
Ga0150984_1116086252	3300012469	Avena Fatua Rhizosphere	FDQIKFLNLNQKSELTPAYYIKQRKNRALIKGSNKYKIFVVGDIIEFLFVFKSIPLLYSGICMAIKKKAFITPDVTLVLRNIIMKVAVEVTVSFFYNRIYKLKFLDYKRKFYFYNKNKIFFLRKRLNRESKIGD*
Ga0150984_1147891432	3300012469	Avena Fatua Rhizosphere	KNLYNHFIINNVILEKLKLTPAFYIKQRKNRAFIKGSEKYKIFLVGDVIEFLFIFKSVPLLYSGICIAIRKKAFLVPDVTLILRNIIMKVAVEITVSFFYNRIYKLKFLDYKRKFYSFNKNKIFFIRKRLNRESRIGD*
Ga0150984_1153383043	3300012469	Avena Fatua Rhizosphere	MNNNIYNYFKINDFLDRHKKLTPAFYIKQRKNRKNIKGSKKYKKFIVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKIAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRIGD*
Ga0150984_1161508193	3300012469	Avena Fatua Rhizosphere	KYKLTPAFYIKQRKNRSFIKGSKKYKIFIVGDIIEFLFIFKSVPLLFSGICIAIRKKSFLVPDVTLILRNIIMKTAIEVTVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD*
Ga0150984_1222898592	3300012469	Avena Fatua Rhizosphere	MNEYISNYFKTYDLESKNKKLTPAFYIKQRKNRKNINGSKKYKKFLVGDIIEFLFIFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVTIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRIGD*
Ga0150984_1231114792	3300012469	Avena Fatua Rhizosphere	MRNLYNHFIINNVFLEKFKLTPAFYIKQRKNRALIKGSAKYKIFLVGDIIEFLFIFKSVPLLYSGICIAIRKKAFLVPDVTLILRNIIMKVAVEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD*
Ga0137407_104627622	3300012930	Vadose Zone Soil	MEKIYNYFNISKFLNKKNKLTPAFYIKQRKNRNFIKGSKKYRSFVVGDIIEFVFIFKSVPLLYSGICMAIKKKSFLLPDVTLILRNVIMRIPIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKVGD*
Ga0164241_114047371	3300012943	Soil	TESIKLTPAFYIKQRKNRNFIKGSKKYKIFVVGDVIEFLFIYRSVPLLYSGLCIAIRKKAFLVPDVTLILRNIIMRVAVEITVSFFYNRIYKLKFLDYKRKFYFYNKNKIFFIRKRLNRESRIGD*
Ga0157374_106234682	3300013296	Miscanthus Rhizosphere	MNNIFNHFIINNIILEKLKLTPAFYIKQRKNRALIKGSKKYKIFLVGDVIEFLFIFKSVPLLYSGICIAIRKKAFLVPDVTLILRNIIMKVAVEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD*
Ga0157374_125626271	3300013296	Miscanthus Rhizosphere	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPNVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESR
Ga0157378_101166323	3300013297	Miscanthus Rhizosphere	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPNVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD*
Ga0157378_101251443	3300013297	Miscanthus Rhizosphere	MYIERQNRLTPAFYIKQRKNRNLIKGSKKYKMFLVGDIIEFLFVFKSVPLLFSGICIAIKRKSFLVPDVILVLRNIIMKVAIEVTVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESKVGD*
Ga0163162_118795842	3300013306	Switchgrass Rhizosphere	AFFIKQRKNRNYIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD*
Ga0157375_138046451	3300013308	Miscanthus Rhizosphere	MNNNIYNYFKINDLSDRYKKLTPAFYIKQRKNRKNIKGSKKYKQFIVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFLYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRIGD*
Ga0182001_102171141	3300014488	Soil	MISLYNYFNINSNLDRTSKLTPAFYIKQRKNRASIKGSKKYKVFLVGDIIEFVYAFKSVPLLYSGVCIAIRKKSFLVPNVTLILRNIIMKVAIEVTVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRVGD*
Ga0157377_113791812	3300014745	Miscanthus Rhizosphere	LQIKKELENIYTYFNSKVLVSTHIKYTPAFYIKQRKNRNLIKGSKKYKNFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFLVPDGTLILRNIIMKVIIEVTVSFFYNRVYKLKFLDYKRKFYFYNKNKIFFIRKRLNKESRVGDYT*
Ga0157379_107048392	3300014968	Switchgrass Rhizosphere	MKDIYNYFDQKKAINLEVKEHTPAFYIKQRKNRNLIKGSKKYKSFVIGDIIEFLFVFKSVPLLYSGICIAIRKKSFLVPDVTLILRNIIMKVIIEVTVSFFYNRVYKLKFLDYKRKFYFYNKNKIFFIRKRLNKESRVGDYT*
Ga0132258_105790423	3300015371	Arabidopsis Rhizosphere	MTIPLERNIKQMPSFYIKQRKNRKFIKGSKKYKVFSVGDIIEFLFVYKSVPLLYSGICIAIKYKSFLIPDVTLILRNIIMKVVVEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRISV*
Ga0132258_112688752	3300015371	Arabidopsis Rhizosphere	MKNIDQYFIIKNILSENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD*
Ga0132257_1030017941	3300015373	Arabidopsis Rhizosphere	MKTIYNYFFINDIKNFNLKLTPAFYIKQRKNRKFIKGSKKFKIFLVGDIIEFLFVFKSVPLLYSGICIAIRKKSFLVPDVTLILRNIIMKVAIEVTVSFFYNRIYKLKFLDYKRKFYF
Ga0132255_1010469682	3300015374	Arabidopsis Rhizosphere	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD*
Ga0190275_1000100028	3300018432	Soil	MEKLYDYFNINAYSDRYNKLIPAFYIKQRKNRTFIKGSKRYKNFLVGDIVEFVFLFKSVPLLYSGICIAIRRKSFLVPDVTLILRNIIMKVAIEVTVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRVSD
Ga0181506_12473322	3300019260	Peatland	MDELYNYFSIIDDNNSKKEKLTPDFFIKQRKNRNYIKGSKKYRSFVVGDIIEFVFFFKSISLTYSGICMAIRRKSFIVPDVILVLRNVIMKISIEVTVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIND
Ga0197907_114583622	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	LIKFNHFIINNIILEKLKLTPAFYIKQRKNRALIKGSKKYKIFLVGDVIEFLFIFKSVPLLYSGICIAIRKKAFLVPDVTLILRNIIMKVAVEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD
Ga0196965_10008554	3300020154	Soil	MQEILKYFSPYDISDQKVELTPAFYIRQRKNRGYIKGSKKYKNFLIGDIIEFVFVFKSVPLSYSGICIAIRRKSFLVPDVTLILRNVIIKVAVEITVSFFYNRVYKLKFLDYKRKFYFFNKNKIFFIRRRLNRESRIND
Ga0196965_10158942	3300020154	Soil	MDNKYFRIQNILERQYKLTPAFYIKQRKNRNYIKGSKKYKKFLVGDIIEFLFIFKSVPLLYSGICIAIRRKSFLVPDVTLILRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFYIRKRLNKESRIGD
Ga0196965_10248532	3300020154	Soil	MEGSYNYYHINNLIDRQIKLTPGFYIKQRKNRNCIKGSIKYKKFVVGDIIEFLFVFKSVPLLYSGICIAIRKKTFLMPDVTLILRNIIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRVGD
Ga0213873_100030073	3300021358	Rhizosphere	MFNIYNYFESKEIITSHIKLTPAFYIKQRKNRSFIKGSKKYKIFVIGDIIEFLFIFKSVPLLYSGICIAIRRKSFLVPDVTLILRNVIMKVAIEVTVSFFYNRIYKLKFLDYKRKFYFYNKNKIFFIRKRLNKESRVGA
Ga0247765_10195673	3300023268	Plant Litter	MNNNIYNYFKINDLSDRYKKLTPAFYIKQRKNRKNIKGSKKYKQFIVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRIGD
Ga0179589_102538312	3300024288	Vadose Zone Soil	AFHIKQRKSRNFIKGSNKYKIFVVGDIIEFLFVFKSVPLLYSGICIAIRRKAFLVPNVTLILRNVIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD
Ga0207671_100561293	3300025914	Corn Rhizosphere	MYNYFNISNLLERKNRLTPAFYIKQRKNRKFIKGSKKYKIFTVGDIIEFLFVFKSVPLLFSGICIAIKKKSFLVPDVTLILRNVIMKTAIEVTVSYFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD
Ga0207686_110247891	3300025934	Miscanthus Rhizosphere	AFFIKQRKNRNYIKGSKKYKIFVVGDVIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD
Ga0207674_109561551	3300026116	Corn Rhizosphere	MKIGKXKKIDKNVVLKNRNFIKGSKKYKKFVVGDIVEFLFVFKSVPLLYSGICIAIRRKSFIIPDVILILRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFYNKNKIFFIRKRLNKESRVGD
Ga0207675_1002471761	3300026118	Switchgrass Rhizosphere	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDVIEFLFVFKSVPLLYSGICIAIRKKSFIVPDVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRLGD
Ga0209620_10000972	3300026911	Forest Soil	MNNNIYDYFKIEDFSARFKKLTPAFYIKQRKNRKNIKGSKKYKKFVVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD
Ga0209620_10037272	3300026911	Forest Soil	MENIYNYFTINNNLNKQAKLTPAFYIKQRKNRKTIKGSKKYKIFLVGDIIEFLFVFKSVPLLYSGICIAVRKKSFIMPDVTLILRNIIMKVAIEITVSFFYNRIYKLRFLDYKRKFYFYNKNKIFFIRKRLNKESRVGD
Ga0209005_10006103	3300027037	Forest Soil	MEDFYNYFNKITLLEKSSELTPAFFIKQRKNRKFIKGSKKYKIFEVGDIIEFLFVYKSVPLLYSGICIAIRRKSFLVPDVILILRNIIMRVAVEVIVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD
Ga0209111_10109142	3300027058	Forest Soil	MNNNIYDYFKIEDFSERFKKLTPAFYIKQRKNRKNIKGSRKYKKFVVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD
Ga0209327_10011802	3300027307	Forest Soil	MNNNIYNYFKIEDLSERYKKLTPAFYIKQRKNRKNIKGSKKYKKFLVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD
Ga0209330_10091912	3300027619	Forest Soil	MQNIYTYFNKEIHQNKLTKLTPAFYIKQRKNRAFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD
Ga0209624_102766462	3300027895	Forest Soil	MQNIYTYFNKKIHQNKLTKLTPAFYIKQRKNRAFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD
Ga0268266_101017402	3300028379	Switchgrass Rhizosphere	MKNVYNYFNMTIPLERNIKQMPSFYIKQRKNRKFIKGSKKYKVFSVGDIIEFLFVYKSVPLLYSGICIAIKYKSFLIPDVTLILRNIIMKVVVEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRISV
Ga0268266_103160892	3300028379	Switchgrass Rhizosphere	LENIYTYFNLKELVSTHIKYTPAFYIKQRKNRNLIKGSKKYKNFVVGDIIEFLFVFKSVPLLYSGICIAIRKKSFLVPDVTLILRNIIMKVVIEVTVSFFYNRIYKLKFLDYKRKIYFFNKNKMFFIRKRLNIESRVGD
Ga0268264_115719392	3300028381	Switchgrass Rhizosphere	MKNIYQHFIIKNTLENKLKLTPAFFIKQRKNRNYIKGSKKYKIFVVGDVIEFLFVFKSVPLLYSGICIAIRKKSFIVPNVTLILRNIIMKIAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNK
Ga0210288_10171052	3300030575	Soil	MQNIYTYFNKEIHQNKLTKLTPAFYIKQRKNRAFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFL
Ga0210283_16443281	3300030588	Soil	NKLTKLTPAFYIKQRKNRVFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFLIKISFFFIRKRLNRESRVGD
Ga0257185_103491551	3300030615	Host-Associated	MEDFYNYFNKITLLEKSSKLTPAFFIKQRTNRKFIKGSKKYKTFEVGDIIEFLFVYKSVPLLYSGICIAIRRKSFLVPDVILILRNIIMRVAVEVIVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKI
Ga0210291_112052881	3300030626	Soil	NKLNKLTPAFYIKQRKNRAFIKGSKKYRIFVVGDIIEFLFLYKSVPLLYSGICIAIRKKAFIVPNTTIILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD
Ga0265462_101834351	3300030738	Soil	NKLNKLTPAFYIKQRKNRAFIKGSKKYRIFVVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFL
Ga0265460_114821421	3300030740	Soil	MNDNIYNYFKINDLSDRYKKLTPAFYIKQRKNRKNIKGSKKYKKFIVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNIIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESRIGD
Ga0265460_129019461	3300030740	Soil	MENNYNYFTTNNLLNKQAKLTPAFYIKQRKNRNTIKGSKKYKIFLVGDIIEFLFVFKSVPLLYSGICIAIRKKSFITPDVTLILRNIIMKVAIEITVSFFYNRVYKLKFLDYKRKFYFYNKNKIFFLRKRLNKESRVGY
Ga0265459_115517011	3300030741	Soil	GSKKYKIFSVGDIIEFLFFYKSVPLLYSGICIAIRKKAFIVPNTTIILRNIIMKVAIEIIVSFFPNRIYKLKFLDYKRKIYFFLIKIKLFFIRKRLNRESRVGD
Ga0075378_100174891	3300030779	Soil	YMQNIYTYFNKEMHQNKLTKLTPAFYIKQRKNRVFIKGSKKYKIFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKFYFFNKNKLFFIRKRLNRESRVGD
Ga0102758_100015221	3300030784	Soil	MKIIYNHFIVNNITESIKLTPAFYIKQRKNRNFIKGSKKYKIFVVGDVIEFLFIFRSVPLLYSGLCIAIRKKAFLVPDVTLILRNIIMRVAVEITVSFFYNRIYKLKFLDYKRKFYFYNKNKIFFIRKRLNRESRIGD
Ga0102758_110807412	3300030784	Soil	MEDFYNYFNKITLLEKNSELTPAFFIKQRKNRKFIKGSKKYKIFEVGDIIEFLFVYKSVPLLYSGICIAIRRKSFLIPDVILILRNIIMKVAVEVIVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD
Ga0138304_13291372	3300030790	Soil	MNINIYNYFKIDDLSERYKKLTPAFYIKQRKNRKNIKGSKKYKKFVVGDIIEFLFVFKSVPLLYSGICIAIKRKSFLVPDVTLIIRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFFLRKRLNRESKIGD
Ga0075405_120483502	3300030847	Soil	NNNLDINLKLTLAFYIKQRKNRNFIKGSKKYKTFLVGDIIEFLFVFKSVPLLYSGICIAIRKKAFLVPDVTLILRNVIMKVAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD
Ga0170834_1026408191	3300031057	Forest Soil	MQNIYTYFNKEVHKDKFAKLTPAFYIKQRKNRDFIKGSKKYKIFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTIILRNIIMKVAIEIIVSFFFNRVYKLKFLDYKRKIYFFNKNKLFF
Ga0170834_1073147951	3300031057	Forest Soil	QELSYFFKLKKNNVRLLPSIFIKDRKHRVSIKGMKYKRFVVGDIIEFVVFLKNIPLIFSGICIAIKRKNFLVSDVVLIIRNIILKSIIEVTVAYFFNRIYKLKFMDYKRKFYSYNKNKLYFIRKRINRESKIN
Ga0170834_1081354041	3300031057	Forest Soil	MENIYNYFTINNYLNKQAKLTPAFYIKQRKNRKTIKGSKKYKIFVVGDIIEFLFVFKSVPLLYSGICIAVRKKSFIMPDVTLILRNIIMKVAIEITVSFFYNRVYKLRFLDYKRKFYFYNKNKIFFLRKRLNKESRVGY
Ga0170834_1119823271	3300031057	Forest Soil	YMQNIYTYFNKEMHQNKLTKLTPAFYIKQRKNRVFIKGSKKYKIFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKFYFF
Ga0170824_1011805911	3300031231	Forest Soil	QNIYTYFNKEMHQNKLTKLTPAFYIKQRKNRVFIKGSKKYKIFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKFYFFNKNKLFFIRKRLNRESRVGD
Ga0170824_1228668862	3300031231	Forest Soil	FLNKNEKNFYNYFTVNNNLDINLKLTLAFYIKQRKNRNFIKGSKKYKTFLVGDIIEFLFVFKSVPLLYSGICIAIRKKAFLVPDVTLILRNVIMKVAIEITVSFFYNRIYKLKFLDYKRKFYFFNKNKIFFIRKRLNRESRIGD
Ga0302324_1026523742	3300031236	Palsa	KHQNKLTKLTPAFYIKQRKNRVFIKGSKKYKVFLVGDIIEFLFLYKSVPLLYSGICIAIRKKSFIVPNTTLILRNIIMKVAIEIIVSFFFNRIYKLKFLDYKRKIYFFNKNKLFFIRKRLNRESRVGD
Ga0310813_109027272	3300031716	Soil	MENIYNYFNINNLLKKKHKLTPSFYIKQRKNRNCIKGSKKYKIFVVGDIIEFLFVFKSVPLLFSGICIAIRKKAFIVPDVTLILRNVIMKIAIEVTVSFFYNRIYKLKFLDYKRKFYFYNKNKIFFIRKRLNKESRISN
Ga0307405_1000005119	3300031731	Rhizosphere	MDNYYFRIQNNLERQYKLTPAFYIKQRKNRNYIKGSKKYKKFLVGDIIEFLFIFKSVPLLYSGICIAIKRKSFLVPDVTLILRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFFFFNKNKIFYIRKRLNKESKIGY
Ga0307406_100447233	3300031901	Rhizosphere	MDNYYFRIQNNLERQYKLTPAFYIKQRKNRNYIKGSKKYKKFLVGDIIEFLFIFKSVPLLYSGICIAIKRKSFLVPDVTLILRNVIMKVAIEVTVSFFYNRLYKLKFLDYKRKFYFFNKNKIFYIRKRLNKESKIGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098798

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences