NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098443

Metagenome Family F098443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098443
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 47 residues
Representative Sequence VLASDEEGATLDALRFSLASDIVELVVLTTDEIFLQTLREAVGGARRLW
Number of Associated Samples 87
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 98.04 %
% of genes near scaffold ends (potentially truncated) 98.06 %
% of genes from short scaffolds (< 2000 bps) 91.26 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.495 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(19.417 % of family members)
Environment Ontology (ENVO) Unclassified
(20.388 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.456 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.14%    β-sheet: 0.00%    Coil/Unstructured: 42.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF03352Adenine_glyco 17.48
PF01042Ribonuc_L-PSP 4.85
PF07676PD40 2.91
PF05985EutC 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG28183-methyladenine DNA glycosylase TagReplication, recombination and repair [L] 17.48
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 4.85
COG4302Ethanolamine ammonia-lyase, small subunitAmino acid transport and metabolism [E] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.50 %
All OrganismsrootAll Organisms16.50 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001173|JGI12669J13542_102632Not Available634Open in IMG/M
3300004092|Ga0062389_100645930All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300004092|Ga0062389_104550935Not Available522Open in IMG/M
3300004635|Ga0062388_101000206Not Available812Open in IMG/M
3300005591|Ga0070761_10405834Not Available832Open in IMG/M
3300005993|Ga0080027_10366426Not Available578Open in IMG/M
3300006050|Ga0075028_100081133All Organisms → cellular organisms → Bacteria1622Open in IMG/M
3300006050|Ga0075028_100733273Not Available597Open in IMG/M
3300009633|Ga0116129_1216925Not Available543Open in IMG/M
3300009646|Ga0116132_1170763Not Available661Open in IMG/M
3300009651|Ga0105859_1141131Not Available675Open in IMG/M
3300009651|Ga0105859_1269205Not Available524Open in IMG/M
3300010341|Ga0074045_10270157Not Available1120Open in IMG/M
3300011271|Ga0137393_10518614All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300012096|Ga0137389_11603352Not Available547Open in IMG/M
3300012203|Ga0137399_10106402All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium2180Open in IMG/M
3300012917|Ga0137395_10986857Not Available604Open in IMG/M
3300012925|Ga0137419_11091226Not Available664Open in IMG/M
3300014638|Ga0181536_10522814Not Available514Open in IMG/M
3300014657|Ga0181522_10187250Not Available1215Open in IMG/M
3300015051|Ga0137414_1080039Not Available1431Open in IMG/M
3300015054|Ga0137420_1243292Not Available627Open in IMG/M
3300015082|Ga0167662_1030420Not Available693Open in IMG/M
3300015203|Ga0167650_1118272Not Available565Open in IMG/M
3300015241|Ga0137418_11188878Not Available537Open in IMG/M
3300017948|Ga0187847_10399050Not Available756Open in IMG/M
3300018037|Ga0187883_10568666Not Available587Open in IMG/M
3300020581|Ga0210399_11393861Not Available548Open in IMG/M
3300020582|Ga0210395_10636461Not Available799Open in IMG/M
3300020583|Ga0210401_11116460Not Available647Open in IMG/M
3300021168|Ga0210406_11322689Not Available518Open in IMG/M
3300021170|Ga0210400_10263083Not Available1412Open in IMG/M
3300021171|Ga0210405_10952845Not Available649Open in IMG/M
3300021171|Ga0210405_11031867Not Available618Open in IMG/M
3300021180|Ga0210396_10154698All Organisms → cellular organisms → Bacteria → Proteobacteria2059Open in IMG/M
3300021401|Ga0210393_10337406All Organisms → cellular organisms → Bacteria → Proteobacteria1226Open in IMG/M
3300021402|Ga0210385_10911667Not Available675Open in IMG/M
3300021402|Ga0210385_11428561Not Available529Open in IMG/M
3300021403|Ga0210397_10460948Not Available958Open in IMG/M
3300021403|Ga0210397_11071205Not Available626Open in IMG/M
3300021403|Ga0210397_11166290Not Available599Open in IMG/M
3300021404|Ga0210389_11338440Not Available548Open in IMG/M
3300021433|Ga0210391_10221395All Organisms → cellular organisms → Bacteria → Proteobacteria1487Open in IMG/M
3300021477|Ga0210398_10526906Not Available961Open in IMG/M
3300021479|Ga0210410_11454452Not Available578Open in IMG/M
3300023259|Ga0224551_1013752All Organisms → cellular organisms → Bacteria → Proteobacteria1359Open in IMG/M
3300025604|Ga0207930_1062553Not Available904Open in IMG/M
3300025619|Ga0207926_1072886Not Available888Open in IMG/M
3300026214|Ga0209838_1055143Not Available590Open in IMG/M
3300026291|Ga0209890_10216696Not Available608Open in IMG/M
3300026319|Ga0209647_1093340Not Available1453Open in IMG/M
3300026515|Ga0257158_1129383Not Available510Open in IMG/M
3300026555|Ga0179593_1135618All Organisms → cellular organisms → Bacteria → Proteobacteria1893Open in IMG/M
3300026557|Ga0179587_10536942Not Available768Open in IMG/M
3300026557|Ga0179587_10821516Not Available613Open in IMG/M
3300027168|Ga0208239_1009868Not Available856Open in IMG/M
3300027297|Ga0208241_1064613Not Available585Open in IMG/M
3300027567|Ga0209115_1005612Not Available2547Open in IMG/M
3300027567|Ga0209115_1059922Not Available868Open in IMG/M
3300027568|Ga0208042_1088826Not Available783Open in IMG/M
3300027574|Ga0208982_1008830All Organisms → cellular organisms → Bacteria → Proteobacteria2004Open in IMG/M
3300027671|Ga0209588_1273799Not Available511Open in IMG/M
3300027676|Ga0209333_1123727Not Available700Open in IMG/M
3300027767|Ga0209655_10225622All Organisms → cellular organisms → Bacteria → Proteobacteria614Open in IMG/M
3300027889|Ga0209380_10228987All Organisms → cellular organisms → Bacteria → Proteobacteria1092Open in IMG/M
3300028014|Ga0265345_108009Not Available523Open in IMG/M
3300028015|Ga0265353_1030391Not Available540Open in IMG/M
3300029882|Ga0311368_10519069Not Available853Open in IMG/M
3300029939|Ga0311328_10635049Not Available731Open in IMG/M
3300029954|Ga0311331_10897727Not Available783Open in IMG/M
3300029999|Ga0311339_11480385Not Available606Open in IMG/M
3300030007|Ga0311338_10274806Not Available1878Open in IMG/M
3300030007|Ga0311338_10997612Not Available813Open in IMG/M
3300030007|Ga0311338_11651491Not Available584Open in IMG/M
3300030046|Ga0302305_1251750Not Available622Open in IMG/M
3300030053|Ga0302177_10604694Not Available560Open in IMG/M
3300030056|Ga0302181_10080795Not Available1641Open in IMG/M
3300030225|Ga0302196_10287092Not Available757Open in IMG/M
3300030503|Ga0311370_10106239All Organisms → cellular organisms → Bacteria3962Open in IMG/M
3300030503|Ga0311370_11861100Not Available608Open in IMG/M
3300030524|Ga0311357_10282633Not Available1595Open in IMG/M
3300030618|Ga0311354_10981926Not Available780Open in IMG/M
3300030677|Ga0302317_10137379All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300030746|Ga0302312_10358528Not Available545Open in IMG/M
3300030906|Ga0302314_10154109All Organisms → cellular organisms → Bacteria → Proteobacteria2929Open in IMG/M
3300031027|Ga0302308_10425717Not Available793Open in IMG/M
3300031057|Ga0170834_105423672Not Available595Open in IMG/M
3300031057|Ga0170834_106013971Not Available659Open in IMG/M
3300031231|Ga0170824_109812421Not Available756Open in IMG/M
3300031231|Ga0170824_122269967Not Available728Open in IMG/M
3300031234|Ga0302325_12086451Not Available695Open in IMG/M
3300031234|Ga0302325_13119476Not Available532Open in IMG/M
3300031234|Ga0302325_13277492Not Available514Open in IMG/M
3300031525|Ga0302326_10300355All Organisms → cellular organisms → Bacteria2567Open in IMG/M
3300031708|Ga0310686_119199493Not Available512Open in IMG/M
3300031711|Ga0265314_10180084Not Available1267Open in IMG/M
3300031718|Ga0307474_10387818Not Available1085Open in IMG/M
3300031753|Ga0307477_10041854Not Available3147Open in IMG/M
3300031788|Ga0302319_11654036Not Available561Open in IMG/M
3300032160|Ga0311301_12760433Not Available538Open in IMG/M
3300033887|Ga0334790_228402Not Available523Open in IMG/M
3300034163|Ga0370515_0143720All Organisms → cellular organisms → Bacteria1024Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa19.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.65%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.80%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.88%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.88%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.88%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.91%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.94%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.94%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.94%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.94%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.94%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.94%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.94%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.94%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.97%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.97%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.97%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.97%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001173Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009646Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150EnvironmentalOpen in IMG/M
3300009651Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015082Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300015203Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300023259Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026214Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027168Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)EnvironmentalOpen in IMG/M
3300027297Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027574Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300028014Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2EnvironmentalOpen in IMG/M
3300028015Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030046Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3EnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030225Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030677Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12669J13542_10263213300001173Forest SoilLVLASDEDGSTLDALKFSLASDIIELVVLTSDDAFLQTLREAVGGAR
Ga0062389_10064593033300004092Bog Forest SoilVLASDEDGGTLDALKFSLASDIVELVVLTTDEVFLQTLRDAAGGSRRLWHVMSP
Ga0062389_10455093523300004092Bog Forest SoilVLASDEDGGAIDALRYSLASDIVELVVLTDDGPFLQTLREAV
Ga0062388_10100020623300004635Bog Forest SoilVLAPEDDGRMMDSLRFSLASDIVELVVLTTDELFLQTLRE
Ga0070761_1040583413300005591SoilVLASEDESRALAALRFSLASDIVELVVLTVDELFLQTLREGVGPARRLWHVLSPDKV
Ga0080027_1036642613300005993Prmafrost SoilVLASDEEVGSLDALRFSLATDIVELVVLTCDEAFLQTLREAVGSARRLWHVASGDKV
Ga0066789_1021386613300005994SoilLLASEETSDPISSLSFSHARDIVELVTLTTDEMFLQTLREAVGTTRRLWHV
Ga0075028_10008113313300006050WatershedsVLASDEEGATLDALRFSLASDIVELVVLTADPAFLLTLREAVGG
Ga0075028_10073327313300006050WatershedsVLAPDEEGAQLDALSFSLASDIVELVVLTADELFLQTLREAV
Ga0116129_121692513300009633PeatlandVLAPEDDGRAIEALRFSLASDIVELVVLTVDAIFLQTLREAVGPTRRLWHVPTSDK
Ga0116132_117076323300009646PeatlandMVEGKRAVLASGLEGSRTEAFASNLASDIVELVVLTTDSAFLQTLREAVGGSR
Ga0105859_114113123300009651Permafrost SoilVLALEEEDRSIAAMRFSLASDVVELVVLTGDEIFLQTLREAVGGSRRLWH
Ga0105859_126920513300009651Permafrost SoilVLASDEEGGTLDALRFSLASDIVELVVLTSDEAFLQTLREAVGSARRLW
Ga0074045_1027015733300010341Bog Forest SoilVLASDEDGGSLEALKFSLASEIVELIVLTADPFFLQTLREAV
Ga0137393_1051861433300011271Vadose Zone SoilVLASDEDDGTLDTLRFSLASEIVELVVLTSDEVFLQT
Ga0137389_1160335213300012096Vadose Zone SoilVLASDEEGGTLDALRFSLASDIVELVVLTTDEVFLQTLREAVGGARRLWHVP
Ga0137399_1010640213300012203Vadose Zone SoilVLASDEEGGTLDALRFSLASDIVELVVLTNDEVFLQTLREAVGDARR
Ga0137395_1098685723300012917Vadose Zone SoilVLASDEEGGTLDALRFNLASDIVELVVLTSDEVFLQT
Ga0137419_1109122623300012925Vadose Zone SoilMGRSQVLASDKDRDTQNALGFSLASDIVELVVFTNDDVFLQTLREALGGARRLWH
Ga0181536_1052281413300014638BogVLAPEDEGQAMDALRFSLASDIVELVVLTGDEIFLQTLREAVGA
Ga0181522_1018725013300014657BogLLASDEEGGALDALRFSLASDIVELVVLTGDEAFLQTLREAVGG
Ga0137414_108003913300015051Vadose Zone SoilLVLASDEDGGTLEALKFSLASDIVELLVLTTDGIFLQTLRDAVIFLQTLRDAVGGARRLW
Ga0137420_124329223300015054Vadose Zone SoilVLASNEEGGTLDALRFSLASDIVELVVLTSDEVFLQTLREA
Ga0167662_103042013300015082Glacier Forefield SoilVLASDEEGATLNALRFSLASEIVELVVLTADEAFLQTLREA
Ga0167650_111827213300015203Glacier Forefield SoilMQAVLASENQDDSPAALGFSFAGDIVELVIFTADDTFLQTMREAVGETRRLWHVPS
Ga0137418_1118887813300015241Vadose Zone SoilMRRSQVLASDKDRDTQNALGFSLASDIVELVVFTNDDVFLQTLREALGGARRLWH
Ga0187847_1039905023300017948PeatlandMRGKQPVLASDEESATLDALRYSLASEIVELVVLTSDEIFLQTLREAV
Ga0187883_1056866613300018037PeatlandLLASRGDRAALETRRFSLASDIVELVVLTADEAFLQTLRDAVGSSRRLWNVATP
Ga0210399_1139386113300020581SoilVLASDADASLEALKFSLASDIVELVVLTTDQVFLQTLREAVGGARRLWNVASADK
Ga0210395_1063646123300020582SoilMLASDEEGGALDALRFSLASDIVELVVLTTDEVFLQT
Ga0210401_1111646013300020583SoilVLASEDESRALAALRFSLASDIVELVVLTADEAFLQTLKEGVGAARR
Ga0210406_1132268923300021168SoilVLASDEDGSTFDALKFSLASDIVELVVLTSDDVFLQTLREAL
Ga0210400_1026308313300021170SoilVLASDEEGATLDALRFSLASDIVELVVLTTDEIFLQTLREAV
Ga0210405_1095284513300021171SoilMLASDADGALEALKFSLASDIVELVVLTTDQVFLQTLREAVGSARR
Ga0210405_1103186723300021171SoilVLAPEDDSRAIEALRFSLASDIVELVVLTGDEIFLQTLRE
Ga0210396_1015469813300021180SoilVLASDEDGSTLDALKFSLASDIIELVVLTSDDAFLQTLRE
Ga0210393_1033740633300021401SoilVLASDEDGDSLEALRFSLASDIVELVVLTTDHVFLQT
Ga0210385_1091166723300021402SoilVLASDEDGDSLEALRFSLASDIVELVVLTTDHVFLQTLRDAVGGARRLWNVPSADK
Ga0210385_1142856123300021402SoilVLAPEDDSRAIEALRFSLASDIVELVVLTADDIFLQTLREAVGPTRRL
Ga0210397_1046094833300021403SoilVLASDEDGRALDALKFSLASEIVELVVLTADDAFLQTLREAVGGARRLWHV
Ga0210397_1107120523300021403SoilVLASDEEGGSLDALRFSLASDIVELVVLTCDEEFLQ
Ga0210397_1116629013300021403SoilVLASDEDGASLDALRFSLASDIVELVVLTCDEAFLQTLREAVGGARRLWHVA
Ga0210389_1133844023300021404SoilVLASDEEGVTLDALRFSLASDIVELVVLTTDEIFLQTLREAVG
Ga0210391_1022139513300021433SoilVLASDEDGGTLDALKFSLASDIIELVVLTADDAFLQTLREAVGGARRLWH
Ga0210398_1052690613300021477SoilVLASDEEGATLDALRFSLASDIVELVVLTTDEIFLQTLREAVG
Ga0210410_1145445223300021479SoilVLASDEEGATLDALRFSLASDIVELVVLTTDEIFLQTLREAVGGARRLWHVASADKV
Ga0224551_101375213300023259SoilVLASDEDGSTLGALKFSLASDIIELVVLTSDDAFLQTLREAVGGARRLWHVPSAD
Ga0207930_106255313300025604Arctic Peat SoilMKGKQPVLASDEEGATLDALRSNLASEIVELVVLTSDEVFLQTL
Ga0207926_107288623300025619Arctic Peat SoilVLAPEEEGRSIAAMGFSLASDIVELVVLSGDEIFLQTLREAVGGSRRLWHVPS
Ga0209838_105514323300026214SoilVLASDEDGGALDALKFSLASDIVELVVLTGDEAFLQTLREAVGGTRR
Ga0209890_1021669613300026291SoilVLASDEEDGTLDALRFSLASDIVELVVLTSDEAFLQTLREAVGSAR
Ga0209647_109334033300026319Grasslands SoilVLASDEEGGTLDALRFNLASDIVELVVLTSDEVFL
Ga0257158_112938323300026515SoilVLASDKEGGTLDALRFSLASEIVELVVLTSDEVFLQ
Ga0179593_113561843300026555Vadose Zone SoilVLASDEDGGTLEALKFSLASDIVELLVLTGDAVFLQTLREAIGGARRLWHVLSADK
Ga0179587_1053694213300026557Vadose Zone SoilVLASDEDGGTLEALKFSLASDIVELLVLTTDGIFLQTLRDAVGGARRLWHVLSADK
Ga0179587_1082151623300026557Vadose Zone SoilVLASDEEGATLDALGFSLASDIVELGVLSADPAFLLTLREAGGGAR
Ga0208239_100986813300027168Forest SoilVLASEDESRALAALRFSLASDIVELVVLTGDEAFLQTLREGVGAARRLWHVL
Ga0208241_106461323300027297Forest SoilLVLASDEDGDSLEALRFSLASDIVELVVLTRDHVFLQTLRDAVGGARR
Ga0209115_100561243300027567Forest SoilMLASDEEGGTLDALRFSLASDIVELVVLTTDEVFLQTLREAVGGARRLWHVP
Ga0209115_105992213300027567Forest SoilVLASDEDGGTLDALKFSLASDIIELVVLTSDDAFLQTLREAVG
Ga0208042_108882613300027568Peatlands SoilVLAPDEAGRSIGAMGFSLANEIVELVVLTGDEIFLQTLREAVGGSRRLWHVPSADKVS
Ga0208982_100883013300027574Forest SoilVLASDEDGSTLDALKFSLASDIVELVVLTADGAFLQTLREAVGGARRLWTRQLPRT
Ga0209588_127379923300027671Vadose Zone SoilVLASDEEGGTLNAPRFSLASDIVELVVLTSDEVFLQTL
Ga0209333_112372713300027676Forest SoilVLAPEDEGRAMDALRFSLASDIVELVVLTGDEIFLQTLREAVGAAR
Ga0209655_1022562213300027767Bog Forest SoilVLASDEESATLDALRFSLASEIVELVVLTTDEAFLQTL
Ga0209380_1022898733300027889SoilVLASEDESRALAALRFSLASDIVELVVLTADEAFLQTLKEG
Ga0265345_10800913300028014Plant LitterVLASDEDGGALDALKFSLASDIVELVVLTSDDAFLQTLRE
Ga0265353_103039113300028015SoilVLASDEDGDSLEALKFSLASDIVELVVLTTDQVFLQTLREAVGGARRLWNVPSA
Ga0311368_1051906923300029882PalsaVLASDEEVSSLDALKFSLASDIVELVVLTADEAFLH
Ga0311328_1063504923300029939BogVLASDHEDSINSLSFSSASDIVELVIFTQDEVFLQTLREAVGGARRLWHVHSA
Ga0311331_1089772723300029954BogMRGKQPVLASDEESATLDALRFSLASDIVELVVLTSD
Ga0311339_1148038513300029999PalsaVLASNHEDSINSLSFSSASDIVELVIFTQDEVFLQTLREAVGGARRLWHV
Ga0311338_1027480643300030007PalsaMALATDDDTLQFSFASDIVELVVLTRDEVFLQTMREAVGAARR
Ga0311338_1099761223300030007PalsaVLASEDESRALAALRFSLASDIVELVVLTVDELFLQTLREGVGPARRL
Ga0311338_1165149123300030007PalsaLVLASDEEGRAIESLRFSLASDIVELVVLTGDEGLLQVFREAVGGARRLWHVPSSDK
Ga0302305_125175013300030046PalsaVLASNHEDSINSLSFSSASDIVELVIFTQDEVFLQTLREAVGGARRLWHVPSADKVGDL
Ga0302177_1060469423300030053PalsaMIRKHLVLASDEDGSTLEALKFSLASDIVELVVLT
Ga0302181_1008079513300030056PalsaVLASEDESRALAALRFSLASDIVELVVLTADEAFLQTLREGVGAARRLWH
Ga0302196_1028709213300030225BogVLAPEDDTRTMDALRFSLAADIVELVVLTADEAFLQTLREAVGASRRLWHVLS
Ga0311370_1010623913300030503PalsaVLASNREDSSNSLSFSSASDIVELVIFTQDEVFLQTLREAVG
Ga0311370_1186110023300030503PalsaVLASDEEVSSLDALKFSLASDIVELVVLTADEAFLHTMREAVGG
Ga0311357_1028263343300030524PalsaVLASNHEDSINSLSFSSASDIVELVIFTQDEVFLQTLREAVGGARRLW
Ga0311354_1098192613300030618PalsaVLASEDESRALAALRFSLASDIVELVVLTADEAFLQTLREGVGAARRLWHVLS
Ga0302317_1013737933300030677PalsaVLASEDESHALAALRFSLASDIVELVVLTADEAFLQTLREGVGS
Ga0302312_1035852823300030746PalsaMIRKHLVLASDEDGSTLEALKFSLASDIVELVVLTSDDTFLQTLREAVGGA
Ga0302314_1015410913300030906PalsaVLASNREDSSNSLSFSSASDIVELVIFTQDEVFLQTLREAVGGARRLWHVPSADKVGD
Ga0302308_1042571723300031027PalsaVLATDEEGGTLDALRFSLASDIVELVVLTADEAFLQTLREAVGGARRLWHVPSGDKVS
Ga0170834_10542367213300031057Forest SoilVLASDEEGGSLDALRFSLASDIVELVVLTCDEAFLQTFRE
Ga0170834_10601397123300031057Forest SoilMLAPEDDGPTMDALRFSLASDIVELVVLTEDEAFLQTLREAVGETRRLWHVPSSD
Ga0170824_10981242123300031231Forest SoilVLASDEEGAQLDALRFSLASDIVELVVLTADETFRQTLRE
Ga0170824_12226996723300031231Forest SoilVLASDEDGRALDALKFSLASEIVELVVLTADDAFLQTL
Ga0302325_1208645123300031234PalsaVLASEDESRALAALRFSLASDIVELVVLTVDELFLQTLREGVGPARRLW
Ga0302325_1311947633300031234PalsaVLAPDDESRAFDALRSSLASDIVELVVLTADDPFLQTL
Ga0302325_1327749223300031234PalsaVLASDQDDDATFSLSFSSAGDIVELVIFSIDEAFLQTLRDAMGGSRRLWHVPSAD
Ga0302326_1030035543300031525PalsaMAGKQPVLASDEESATLDALHYSLASDIVELVVLTSDDMFLQTLREAVGPARR
Ga0310686_11919949323300031708SoilMALASDDEEGGTLDTLQFSFASDIVELVVLTGDEVFLQTLREA
Ga0265314_1018008433300031711RhizosphereVLASDEEGALLNALRFSLASDIVELVVLTGDEAFLQTLREAVGGARRLWHVPS
Ga0307474_1038781833300031718Hardwood Forest SoilVLASDEEGATLDALRFSLASDIVELVVLTTDEIFLQTLREAVGGARRLW
Ga0307477_1004185413300031753Hardwood Forest SoilVLASDEEGATLDALRFSLASDIVELVVLTTDEIFL
Ga0302319_1165403623300031788BogVLASDEEGGTLDALRFSLASDIVELVVLTADDAFLQT
Ga0311301_1276043313300032160Peatlands SoilVLASEDDADGGSAFGFDLASDIVELVVLTSDTAFLQTLREALGGTRRLWHVP
Ga0334790_228402_2_1903300033887SoilMVEGKRAVSASEHEGSSTGAFAFNLASDIVELVVLTTDSAFLQTLREAVGGSRRLWHVPSGDK
Ga0370515_0143720_3_1673300034163Untreated Peat SoilMTDPVLASEDESRALAALRFSLASDIVELVVLTTDEAFLQTLKEGVGAARRLWHV


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