Metagenome Family F098318

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098318
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	92 residues
Representative Sequence	MARYKGRMSPKAIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Number of Associated Samples	83
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	34.31 %
% of genes near scaffold ends (potentially truncated)	32.69 %
% of genes from short scaffolds (< 2000 bps)	83.65 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (40.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (78.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.05% β-sheet: 20.17% Coil/Unstructured: 53.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF06348	DUF1059	15.38
PF07238	PilZ	1.92
PF12071	DUF3551	1.92
PF01527	HTH_Tnp_1	1.92
PF13683	rve_3	0.96
PF07811	TadE	0.96
PF00589	Phage_integrase	0.96
PF00571	CBS	0.96
PF13751	DDE_Tnp_1_6	0.96
PF13542	HTH_Tnp_ISL3	0.96
PF11994	DUF3489	0.96
PF02586	SRAP	0.96
PF07045	DUF1330	0.96
PF05119	Terminase_4	0.96
PF02146	SIR2	0.96
PF13505	OMP_b-brl	0.96
PF00313	CSD	0.96
PF13356	Arm-DNA-bind_3	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.96
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.96
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
All Organisms	root	All Organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
cellular organisms	root	All Organisms → cellular organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.27 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %
Hyphomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales	0.96 %
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	0.96 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.96 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.81 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	3.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	0.96 %
Hyphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae	0.96 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	4.81 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	3.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Acidiferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter	0.96 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.96 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.96 %
Hyphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	3.85 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	2.88 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	1.92 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.96 %
unclassified Chelatococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → unclassified Chelatococcus	0.96 %
Acidiferrobacter thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	0.96 %
Hyphomonas oceanitis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas oceanitis	0.96 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	3.85 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2.88 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	1.92 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Chelatococcus sp. YT9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → unclassified Chelatococcus → Chelatococcus sp. YT9	0.96 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.96 %
Acidiferrobacter thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	0.96 %
Hyphomonas oceanitis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas oceanitis	0.96 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908028\|beta3_all_NODE_56090_len_1222_cov_11_684942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → unclassified Chelatococcus → Chelatococcus sp. YT9	1272	Open in IMG/M
2124908035\|B3_GZOS_CLC_ConsensusfromContig90237	Not Available	996	Open in IMG/M
2124908038\|B3_all_c_ConsensusfromContig103680	Not Available	864	Open in IMG/M
2124908039\|B3_v_NODE_47480_len_857_cov_11_976663	Not Available	907	Open in IMG/M
2140918008\|ConsensusfromContig182537	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
2140918008\|ConsensusfromContig211351	Not Available	905	Open in IMG/M
2140918008\|ConsensusfromContig373988	Not Available	640	Open in IMG/M
2140918024\|NODE_360164_length_611_cov_5.369885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	661	Open in IMG/M
3300001383\|JGI20194J14741_1009746	Not Available	1004	Open in IMG/M
3300001396\|JGI20175J14863_1017376	Not Available	984	Open in IMG/M
3300001402\|JGI20195J14853_1008174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans	2709	Open in IMG/M
3300001412\|JGI20173J14856_1011552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	1667	Open in IMG/M
3300001414\|JGI20174J14864_1009584	Not Available	542	Open in IMG/M
3300001527\|A3513AW1_1455423	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300002347\|JGIcombinedJ26865_1016762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1199	Open in IMG/M
3300002549\|JGI24130J36418_10113230	Not Available	607	Open in IMG/M
3300003369\|JGI24140J50213_10236868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	563	Open in IMG/M
3300004156\|Ga0062589_101048056	Not Available	766	Open in IMG/M
3300005293\|Ga0065715_10461509	Not Available	815	Open in IMG/M
3300005330\|Ga0070690_100464086	Not Available	941	Open in IMG/M
3300005366\|Ga0070659_101152644	Not Available	684	Open in IMG/M
3300005444\|Ga0070694_101381739	Not Available	594	Open in IMG/M
3300005544\|Ga0070686_100405981	Not Available	1037	Open in IMG/M
3300005947\|Ga0066794_10066419	Not Available	1071	Open in IMG/M
3300005947\|Ga0066794_10108205	Not Available	832	Open in IMG/M
3300005980\|Ga0066798_10131791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	708	Open in IMG/M
3300005980\|Ga0066798_10164441	Not Available	614	Open in IMG/M
3300005994\|Ga0066789_10068940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1534	Open in IMG/M
3300005994\|Ga0066789_10092022	Not Available	1305	Open in IMG/M
3300005994\|Ga0066789_10510857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas oceanitis	502	Open in IMG/M
3300005995\|Ga0066790_10190662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	877	Open in IMG/M
3300005995\|Ga0066790_10468091	Not Available	539	Open in IMG/M
3300006052\|Ga0075029_100672403	Not Available	697	Open in IMG/M
3300006055\|Ga0097691_1017017	All Organisms → cellular organisms → Bacteria	3284	Open in IMG/M
3300006636\|Ga0075525_10041601	Not Available	899	Open in IMG/M
3300006638\|Ga0075522_10132404	Not Available	1315	Open in IMG/M
3300006640\|Ga0075527_10083866	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300006642\|Ga0075521_10039357	All Organisms → cellular organisms → Bacteria → Proteobacteria	2025	Open in IMG/M
3300006642\|Ga0075521_10082129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1456	Open in IMG/M
3300006642\|Ga0075521_10090612	All Organisms → cellular organisms → Bacteria → Proteobacteria	1392	Open in IMG/M
3300006795\|Ga0075520_1160948	Not Available	973	Open in IMG/M
3300006795\|Ga0075520_1183080	Not Available	897	Open in IMG/M
3300006864\|Ga0066797_1158745	Not Available	790	Open in IMG/M
3300006949\|Ga0075528_10037128	Not Available	1246	Open in IMG/M
3300007821\|Ga0104323_107390	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300009029\|Ga0066793_10215328	Not Available	1117	Open in IMG/M
3300009029\|Ga0066793_10305979	Not Available	918	Open in IMG/M
3300009649\|Ga0105855_1073125	Not Available	950	Open in IMG/M
3300009650\|Ga0105857_1050038	Not Available	1097	Open in IMG/M
3300009650\|Ga0105857_1080313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	867	Open in IMG/M
3300009651\|Ga0105859_1033417	Not Available	1298	Open in IMG/M
3300009660\|Ga0105854_1212648	Not Available	646	Open in IMG/M
3300009839\|Ga0116223_10416807	Not Available	789	Open in IMG/M
3300010396\|Ga0134126_10008835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12687	Open in IMG/M
3300012895\|Ga0157309_10068888	Not Available	918	Open in IMG/M
3300013832\|Ga0120132_1004591	Not Available	2138	Open in IMG/M
3300014638\|Ga0181536_10012228	Not Available	7749	Open in IMG/M
3300014838\|Ga0182030_10539867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1148	Open in IMG/M
3300015371\|Ga0132258_11207524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	1912	Open in IMG/M
3300015373\|Ga0132257_102312826	Not Available	697	Open in IMG/M
3300015374\|Ga0132255_101558479	Not Available	1001	Open in IMG/M
3300017927\|Ga0187824_10038964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1447	Open in IMG/M
3300025457\|Ga0208850_1040715	Not Available	783	Open in IMG/M
3300025457\|Ga0208850_1068196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	579	Open in IMG/M
3300025475\|Ga0208478_1005628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2992	Open in IMG/M
3300025482\|Ga0208715_1010176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1885	Open in IMG/M
3300025494\|Ga0207928_1001489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4039	Open in IMG/M
3300025494\|Ga0207928_1004867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2521	Open in IMG/M
3300025509\|Ga0208848_1000911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5745	Open in IMG/M
3300025544\|Ga0208078_1028246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	1242	Open in IMG/M
3300025553\|Ga0208080_1065056	Not Available	865	Open in IMG/M
3300025579\|Ga0207927_1083253	Not Available	751	Open in IMG/M
3300025619\|Ga0207926_1039653	Not Available	1363	Open in IMG/M
3300025619\|Ga0207926_1087523	Not Available	778	Open in IMG/M
3300025650\|Ga0209385_1008673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4295	Open in IMG/M
3300025650\|Ga0209385_1172580	Not Available	622	Open in IMG/M
3300025764\|Ga0209539_1210024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300025829\|Ga0209484_10008384	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1984	Open in IMG/M
3300025829\|Ga0209484_10026817	Not Available	1191	Open in IMG/M
3300025854\|Ga0209176_10147371	Not Available	583	Open in IMG/M
3300025857\|Ga0209014_10145773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	872	Open in IMG/M
3300025878\|Ga0209584_10294329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300025891\|Ga0209585_10006295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4333	Open in IMG/M
3300025930\|Ga0207701_10066913	Not Available	3265	Open in IMG/M
3300026221\|Ga0209848_1068476	Not Available	631	Open in IMG/M
3300026275\|Ga0209901_1117997	Not Available	521	Open in IMG/M
3300026291\|Ga0209890_10008645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4204	Open in IMG/M
3300026291\|Ga0209890_10043263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1685	Open in IMG/M
3300026291\|Ga0209890_10058666	Not Available	1404	Open in IMG/M
3300026291\|Ga0209890_10276169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	515	Open in IMG/M
3300026294\|Ga0209839_10114465	Not Available	912	Open in IMG/M
3300027629\|Ga0209422_1001034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6693	Open in IMG/M
3300027717\|Ga0209998_10104608	Not Available	703	Open in IMG/M
3300027911\|Ga0209698_11293661	Not Available	534	Open in IMG/M
3300031547\|Ga0310887_10978770	Not Available	539	Open in IMG/M
3300031562\|Ga0310886_10137282	Not Available	1271	Open in IMG/M
3300032000\|Ga0310903_10440420	Not Available	671	Open in IMG/M
3300032012\|Ga0310902_10645104	Not Available	708	Open in IMG/M
3300032017\|Ga0310899_10179947	Not Available	923	Open in IMG/M
3300032122\|Ga0310895_10396232	Not Available	675	Open in IMG/M
3300032160\|Ga0311301_10786787	Not Available	1311	Open in IMG/M
3300034125\|Ga0370484_0102337	Not Available	748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.23%
Host-Associated	Host-Associated	5.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.42%
Plants	Host-Associated → Plants	5.77%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Sediment	Environmental → Aquatic → Sediment	1.92%
Marine	Environmental → Aquatic → Marine	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.00%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	48.08%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	24.04%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	38.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	14.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	7.69%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.92%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908039	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001383	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012	Environmental	Open in IMG/M
3300001396	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300001414	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012	Environmental	Open in IMG/M
3300001527	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illumina	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006636	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300007821	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 Soapdenovo	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300026275	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
beta3_all_00760340	2124908028	Soil	MPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
B3_GZOS_CLC_00378580	2124908035	Soil	VSPKAIERDFPHVVEIAVPPGGLGKQLDAMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
B3_all_c_02415720	2124908038	Soil	MPLADGSEGRIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
B3_v_00497240	2124908039	Soil	MSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Bog_all_C_03385370	2140918008	Soil	VSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
Bog_all_C_01958630	2140918008	Soil	HPQTFFYLGDARRAHNVEPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Bog_all_C_06870380	2140918008	Soil	MTRYKGRMSPKAIEREFPNVVEIAVPPGGLGAQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGT
B_all_v_01720640	2140918024	Soil	MTRYKGRMSPKAIEREFPNVVEIAVPPGGLGVQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR
JGIcombinedJ13530_1000798681	3300001213	Wetland	PHVVEIAAPPGGLGAQLDAMYYFHEVRGIKAFLGRGRREDDPDFLRWYFKNLTTAESFAAEFDGTCLQTPHK*
JGI20194J14741_10097463	3300001383	Arctic Peat Soil	MTRVTRYTGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
JGI20175J14863_10173761	3300001396	Arctic Peat Soil	STEPMTRVTRYAGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
JGI20195J14853_10081745	3300001402	Arctic Peat Soil	MTRVTRYXGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
JGI20173J14856_10115523	3300001412	Arctic Peat Soil	MTRVTRYXGIFETENRGQPVARXKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
JGI20174J14864_10095841	3300001414	Arctic Peat Soil	MPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPCGLGKRLDDMHAFHAAKGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTYLTPARK*
A3513AW1_14554233	3300001527	Permafrost	REFPHVVEIAVPPRGLGVQLDAMHHFHRARGIQACIGLGRRDGGRDYLRWYFTRPAVATAFAAEFGGTEIKASC*
JGIcombinedJ26865_10167621	3300002347	Arctic Peat Soil	HVVEIAVPPRGLGAKLDAMHNFHRARGIQACIGLGRRDGGRDYLRWYFTRPAVANAFAAEFGGTEVKASR*
JGI24130J36418_101132301	3300002549	Arctic Peat Soil	MPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRRKDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK*
JGI24140J50213_102368682	3300003369	Arctic Peat Soil	QKAIEREFPNVVEIAVPPGGLGAQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR*
Ga0062589_1010480562	3300004156	Soil	MTRFKARTSQKAIERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRPHRRRPRRSAPSL*
Ga0065715_104615091	3300005293	Miscanthus Rhizosphere	MTRYKARTSQKAIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRARRSAPSL*
Ga0070690_1004640862	3300005330	Switchgrass Rhizosphere	IERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRARRSAPSL*
Ga0070659_1011526441	3300005366	Corn Rhizosphere	MTRYKARTSQKVIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRVRRSAPSL*
Ga0070694_1013817391	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ARTSQKAIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVIYPPYRSHRRRARRSAPSL*
Ga0070686_1004059812	3300005544	Switchgrass Rhizosphere	MTRYKARTSQKAIKRKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRARRSAPSL*
Ga0066794_100664192	3300005947	Soil	MARYKGRMSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK*
Ga0066794_101082051	3300005947	Soil	EPMARYKGRVSPKVIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0066798_101317913	3300005980	Soil	APDRKFAMPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRDLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK*
Ga0066798_101644412	3300005980	Soil	MTRVTRYAGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0066789_100689404	3300005994	Soil	MTRYKGRMSPKAIERDFPHVVEIAVPLGGLGAQLDAMHYFHEARGIKACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR*
Ga0066789_100920223	3300005994	Soil	VARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0066789_105108571	3300005994	Soil	MARYKGRMSPKAIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0066790_101906622	3300005995	Soil	MTRYKGRMSPKAIEREFPNVVEIAVPPGGLGVQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR*
Ga0066790_104680911	3300005995	Soil	MRYKGRPSSKTIEREVPHVVEIAVPLGGLGKRLDAMHDFHRVFGIKPCLGRSRREDTQDYLSWYFFDRKTATAFVEKFRAKLFAQSNTR*
Ga0075029_1006724031	3300006052	Watersheds	MPRSKSAQSPTETERDFLHVVEIAVPPGGLGAQLNAMHHFHEVRLIKACLGRGRRGDSRDYLRWYFKSPTTAGY
Ga0097691_10170176	3300006055	Arctic Peat Soil	MPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK*
Ga0075525_100416013	3300006636	Arctic Peat Soil	SPKAIERDFPHVVEIAVPPGGLGAQLDAMHHFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAASFAAEFGGTYLRAPTKNA*
Ga0075522_101324042	3300006638	Arctic Peat Soil	MTRYKGRMSPKAIEREFYHVVEIQVPPDGLGAQLDAMHYFHRARGIQACLGLGRRDERRDYLRWYFTRPTVAEAFAAEFGGTVIKKTPR*
Ga0075527_100838663	3300006640	Arctic Peat Soil	MPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRRKDNLDYLRWYFTSPTTAAAFAAEFGGTHLAP
Ga0075521_100393572	3300006642	Arctic Peat Soil	MARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK*
Ga0075521_100821291	3300006642	Arctic Peat Soil	MTRYKGRMSQKAIEREFPNVVEIAVPPGGLGAQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR*
Ga0075521_100906122	3300006642	Arctic Peat Soil	MTRYKGRMSPKAIERDFPHVVEIAVPPGGLGAQLDAMHYFHEAKGIKACLGRGRREKSRDYLRWYFTSPTTAAAFATEFRGTLIKLQR*
Ga0075520_11269633	3300006795	Arctic Peat Soil	VVEIAVPPRGLGAQLDAMHHFHGTRGIQACIGLGRREDGKDHLRWYFADARTAVSFAAEFGGTRRA*
Ga0075520_11609483	3300006795	Arctic Peat Soil	VARYKGRMSPKTIERDFPHVVEIAVPPGSLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAVFAAEFGGTYLRAPTKNA*
Ga0075520_11830801	3300006795	Arctic Peat Soil	MSPKAIEREFPNVVEIAVPPGGLGAQLDAMHHFHRAKGIHACLGLGRRGEGRDYLRWYFTRLTAAESFAAEFGGTVIKSSR*
Ga0066797_11587452	3300006864	Soil	MARYKGRVSPKVIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0075528_100371283	3300006949	Arctic Peat Soil	VARYKGRMSPKTIERDFPHVVEIAVPPGSLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0104323_1073901	3300007821	Soil	PHVVEIAVPPRGLGVQLDAMHQFHRARGIQACIGLGRRDGGRDYLRWYFTRPGVANAFAAEFGGTQIKASR*
Ga0066793_102153282	3300009029	Prmafrost Soil	MTRYKGRMSPKVIERNFPYVVEIAVPPGGLGARLDAMHYFHTARRIAPCLGRGRRENSRDYLRWYFTRPTVAEAFVAEFGGTLIKLQR*
Ga0066793_103059792	3300009029	Prmafrost Soil	MSPKTIERTFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0105855_10731253	3300009649	Permafrost Soil	MTRYKGRTGRKTIEREFPNVVEIAVPPGGLGAQLNAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR*
Ga0105857_10500382	3300009650	Permafrost Soil	MTRYKGRMSQKAIEREFPNVVEIAVPPGGLGVQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR*
Ga0105857_10803132	3300009650	Permafrost Soil	MSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHEAKGIKACLGRGRREKSRDYLRWYFTSPTTAAAFATEFRGTLIKLQR*
Ga0105859_10334173	3300009651	Permafrost Soil	MSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0105854_12126482	3300009660	Permafrost Soil	MTRVTRYAGIFETENRDQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA*
Ga0116223_104168071	3300009839	Peatlands Soil	MRYKGRSSSKSIERGFPHVVEIAVPLGGLGKRLDAMHGFHAICGIKACLGRGRREDNQDHLRWYFADLKTATAFAEKFGGKLSALVR*
Ga0134126_100088356	3300010396	Terrestrial Soil	MSPKAIERDFPRAVEIAVPPGGLGAELDAMHYFHTARRVAPCLGRGRRKNGRDYLRWYFTSPTIAAAFAAEFGGTLIKLKP*
Ga0157309_100688882	3300012895	Soil	MTRFKARTSQKAIERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRPH
Ga0120132_10045912	3300013832	Permafrost	MSPKTAKHDFSHFVEIAVPHGGLGKRLDAMHAFHAARRIKPCLGRGRPEDRRYYLRWYFTRATAAEAFAAEFGGSCERAPSKKIL*
Ga0181536_100122282	3300014638	Bog	MSRYKGRPGHKTIERDFPHVVEVAVPPGGLGKRLDAMHDFHAERGISACLGRGRHEDGKDHLRWYFSEARTAVSFAAEFGGTRL*
Ga0182030_105398672	3300014838	Bog	MRYKGRRNSKTIVRNLPHVVEIAVPLGGLGKRLEAMHDFHNVRGIMPCLGRGRREDNQDQLRWYFAEPKTAATFAEIFGGKLSALAR*
Ga0132258_112075243	3300015371	Arabidopsis Rhizosphere	MTRYKARTSQKGIERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRARRSAPSL*
Ga0132257_1023128261	3300015373	Arabidopsis Rhizosphere	MTRYKARTSQKGIERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRA
Ga0132255_1015584791	3300015374	Arabidopsis Rhizosphere	IERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDEEGRDYLRWYFTRETMAVSFATEFGGKVAGSS*
Ga0187824_100389642	3300017927	Freshwater Sediment	MTTKGGAAPKTFERDFSAVVEIAVPASGLGAQLDAMHDFHAARGIKACIGRCKGTRDLLRWYFTRATTAEAFAAEFGGSFRGALRPPTRASKGTSA
Ga0208850_10407152	3300025457	Arctic Peat Soil	VARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Ga0208850_10681961	3300025457	Arctic Peat Soil	GIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
Ga0208478_10056287	3300025475	Arctic Peat Soil	MTRYKGRKSQKAIEREFAHVVEIAVPPRGLGAKLDAMHNFHRARGIQACIGLGRRDGGRDYLRWYFTRPAVANAFAAEFGGTEVKASR
Ga0208715_10101762	3300025482	Arctic Peat Soil	MARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
Ga0207928_10014897	3300025494	Arctic Peat Soil	MARYKGRVSPKAIERDFPHVVEIAVPPCGLGKRLDDMHAFHAAKGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTYLTPARK
Ga0207928_10048675	3300025494	Arctic Peat Soil	VARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAASFAAEFGGTYL
Ga0208848_10009115	3300025509	Arctic Peat Soil	MPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPCGLGKRLDDMHAFHAAKGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTYLTPARK
Ga0208078_10282461	3300025544	Arctic Peat Soil	CFFLAHFFAAHASISTEPMTRVTRYAGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGSLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Ga0208080_10650563	3300025553	Arctic Peat Soil	MTRVTRYAGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Ga0207927_10832532	3300025579	Arctic Peat Soil	MTRYKGRMSPKAIEREFPNVVEIAVPPGGLGAQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPAVANAFAAEFGGTKVKASR
Ga0207926_10396532	3300025619	Arctic Peat Soil	MARYKGRVSPKAIERDFPHVVEIAVPPCGLGKRLDDMHAFHAARGVKACLGLGRREDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
Ga0207926_10875231	3300025619	Arctic Peat Soil	VARNKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Ga0209385_10086735	3300025650	Arctic Peat Soil	MARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRRKDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
Ga0209385_11725801	3300025650	Arctic Peat Soil	MSPKAIEREFPNVVEIAVPPGGLGAQLDAMHHFHRAKGIHACLGLGRRGEGRDYLRWYFTRLTAAESFAAEFGGTVIKSSR
Ga0209539_12100241	3300025764	Arctic Peat Soil	MTRYKGRMSPKAIEREFPNVVEIAVPPGGLGAQLDAMHYFHRAKGIHACLGLGRRDEGHDYLRWYFTRPTAAESFAAEFGGTVIKSSR
Ga0209484_100083843	3300025829	Arctic Peat Soil	VARYKGRMSPKTIERDFPHVVEIAVPPGSLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Ga0209484_100268171	3300025829	Arctic Peat Soil	AMPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRRKDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
Ga0209176_101473711	3300025854	Arctic Peat Soil	MTRVTRYTGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGT
Ga0209014_101457731	3300025857	Arctic Peat Soil	MPLADGSEGGIFAGMARYKGRVSPKAIERDFPHVVEIAVPPRGLGKQLDDMHAFHAARGVKACLGLGRRKDNLDYLRWYFTSPTTAAAFAAEFGGTHLAPARK
Ga0209584_102943292	3300025878	Arctic Peat Soil	MTRYKGRMSPKAIERDFPHVVEIAVPPGGLGAQLDAMHYFHEAKGIKACLGRGRREKSRDYLRWYFTSPTTAAAFATEFRGTLIKLQR
Ga0209585_100062953	3300025891	Arctic Peat Soil	MTRYKGRMSPKAIEREFYHVVEIQVPPDGLGAQLDAMHYFHRARGIQACLGLGRRDERRDYLRWYFTRPTVAEAFAAEFGGTVIKKTPR
Ga0207701_100669134	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTRYKARTSQKAIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRVRRSAPSL
Ga0209848_10684761	3300026221	Permafrost Soil	MTRYKGRMSPKAIEREFPNVVEIAVPPGGLGAQLNAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTVANAFAAEFGGTVIKSSR
Ga0209901_11179972	3300026275	Permafrost Soil	YTGIFETENRGQPVARYKGRMSPKTIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Ga0209890_100086454	3300026291	Soil	MTRYKGRTGRKTIEREFPNVVEIAVPPGGLGAQLNAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR
Ga0209890_100432634	3300026291	Soil	MTRYKGRMSPKAIERDFPHVVEIAVPLGGLGAQLDAMHYFHEARGIKACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR
Ga0209890_100586663	3300026291	Soil	MRYKGRPSSKTIEREVPHVVEIAVPLGGLGKRLDAMHDFHRVFGIKPCLGRSRREDTQDYLSWYFFDRKTATAFVEKFRAKLFAQSNTR
Ga0209890_102761691	3300026291	Soil	MPLADGSEGGIFAGMARYKGRMSPKAIERDFPHVVEIAVPPGGLGAQLDAMHYFHGARGIKACLGRGRREDNLDYLRWYFTSRTTAAAFAAEFGGTYLRAPTKNA
Ga0209839_101144651	3300026294	Soil	TRYKGRTGRKTIEREFPNVVEIAVPPGGLGAQLNAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR
Ga0209422_10010343	3300027629	Forest Soil	MRYKGRLSSKAIERELPHVVEIAVPPCGLGKRLDAMHDFHNVCGIKPCLGRGRREANQDHLRWYFAEPKTAAAFAEKFGGNLSALVQ
Ga0209998_101046081	3300027717	Arabidopsis Thaliana Rhizosphere	MTRYKARTSQKVIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRVRRSAPSL
Ga0209698_112936611	3300027911	Watersheds	SKSAQSPTETERDFLHVVEIAVPPGGLGAQLNAMHHFHEVRLIKACLGRGRRGDSRDYLCWYFKSPTTAGYFATEFGGKYRNVQRR
Ga0310887_109787701	3300031547	Soil	MTRYKARTSQKAIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLARRDEEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYR
Ga0310886_101372822	3300031562	Soil	MTRYKARTSQKVIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRARRSAPSL
Ga0310903_104404201	3300032000	Soil	MTRYKARTSQKVIERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRPHRRRPRRSAPSL
Ga0310902_106451042	3300032012	Soil	MTRYKARTSQKVIERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLARRDEEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRPHRRRPRRSAPSL
Ga0310899_101799472	3300032017	Soil	MTRYKARTSQKGIERKFPHVVEIVVPPGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYRSHRRRARRSAPSL
Ga0310895_103962321	3300032122	Soil	MTRYKARTSQKVIERKFPHVVEIVVPTGGLGGQLDAMHYFHHARGVQACLGLGRRDKEGRDYLRWYFTGAKMAVSFATEFGGKVINPPYR
Ga0311301_107867871	3300032160	Peatlands Soil	REFPHVVEIAVPPGGLGAQLDAMHYFHRARGIEACLGLGRRDKGRDYLRWYFARPTAADAFAAEFGGTVINASR
Ga0370484_0102337_61_327	3300034125	Untreated Peat Soil	MTRYKGRKSQKAIEREFPNVVEIAVPPGGLGAQLDAMHYFHRAKGIHACLGLGRRDEGRDYLRWYFTRPTAAESFAAEFGGTVIKSSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098318

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences