Metagenome Family F098235

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098235
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	53 residues
Representative Sequence	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVREAVREFLEKSKPHH
Number of Associated Samples	69
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.08 %
% of genes near scaffold ends (potentially truncated)	18.27 %
% of genes from short scaffolds (< 2000 bps)	68.27 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.615 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (27.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (25.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.25% β-sheet: 0.00% Coil/Unstructured: 63.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04266	ASCH	6.73
PF11611	DUF4352	1.92
PF04326	AlbA_2	1.92
PF00882	Zn_dep_PLPC	1.92
PF13175	AAA_15	0.96
PF00494	SQS_PSY	0.96
PF07521	RMMBL	0.96
PF13456	RVT_3	0.96
PF02887	PK_C	0.96
PF00411	Ribosomal_S11	0.96
PF09594	GT87	0.96
PF01878	EVE	0.96
PF13601	HTH_34	0.96
PF01274	Malate_synthase	0.96
PF00291	PALP	0.96
PF03683	UPF0175	0.96
PF01863	YgjP-like	0.96
PF00004	AAA	0.96
PF01867	Cas_Cas1	0.96
PF00150	Cellulase	0.96
PF00005	ABC_tran	0.96
PF00589	Phage_integrase	0.96
PF01694	Rhomboid	0.96
PF02086	MethyltransfD12	0.96
PF13360	PQQ_2	0.96
PF02607	B12-binding_2	0.96
PF02540	NAD_synthase	0.96
PF13476	AAA_23	0.96
PF08220	HTH_DeoR	0.96
PF02384	N6_Mtase	0.96
PF01420	Methylase_S	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	6.73
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	6.73
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	6.73
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	1.92
COG2225	Malate synthase	Energy production and conversion [C]	0.96
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.96
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.96
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.96
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.96
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.96
COG0100	Ribosomal protein S11	Translation, ribosomal structure and biogenesis [J]	0.96
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.96
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.96
COG1518	CRISPR-Cas system-associated integrase Cas1	Defense mechanisms [V]	0.96
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.96
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.96
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.96
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.96
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
All Organisms	root	All Organisms	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
cellular organisms	root	All Organisms → cellular organisms	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	38.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	17.31 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	4.81 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → environmental samples	0.96 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	13.46 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2.88 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	13.46 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	1.92 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.96 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	13.46 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.96 %
Methanocellales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales	0.96 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	13.46 %
unclassified Methanocellales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → unclassified Methanocellales	0.96 %
unclassified Nitrososphaerales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales	0.96 %
Nitrosarchaeum	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	13.46 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.96 %
Methanocellales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → unclassified Methanocellales → Methanocellales archaeon	0.96 %
Candidatus Nitrosarchaeum limnium	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → Candidatus Nitrosarchaeum limnium	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	13.46 %
Candidatus Nitrosarchaeum limnium BG20	strain	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → Candidatus Nitrosarchaeum limnium → Candidatus Nitrosarchaeum limnium BG20	0.96 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.96 %
Methanocellales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → unclassified Methanocellales → Methanocellales archaeon	0.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001446\|JGI20130J15133_1071901	Not Available	681	Open in IMG/M
3300004238\|Ga0066635_10201540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	931	Open in IMG/M
3300005180\|Ga0066685_10012378	All Organisms → cellular organisms → Archaea	4844	Open in IMG/M
3300005180\|Ga0066685_10616236	Not Available	747	Open in IMG/M
3300005186\|Ga0066676_10800956	Not Available	638	Open in IMG/M
3300005236\|Ga0066636_10376086	Not Available	576	Open in IMG/M
3300005298\|Ga0071330_1121017	Not Available	1014	Open in IMG/M
3300005518\|Ga0070699_100155843	Not Available	2021	Open in IMG/M
3300005536\|Ga0070697_100005408	All Organisms → cellular organisms → Archaea	9835	Open in IMG/M
3300005542\|Ga0070732_10203159	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1184	Open in IMG/M
3300005555\|Ga0066692_10271403	Not Available	1073	Open in IMG/M
3300005573\|Ga0078972_1008997	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	20160	Open in IMG/M
3300005860\|Ga0080004_1112046	All Organisms → cellular organisms → Archaea	17963	Open in IMG/M
3300006796\|Ga0066665_11207266	Not Available	577	Open in IMG/M
3300009012\|Ga0066710_100552525	All Organisms → cellular organisms → Archaea	1742	Open in IMG/M
3300009012\|Ga0066710_100636419	Not Available	1621	Open in IMG/M
3300009029\|Ga0066793_10417690	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	770	Open in IMG/M
3300009037\|Ga0105093_10853304	Not Available	532	Open in IMG/M
3300009038\|Ga0099829_10000483	All Organisms → cellular organisms → Archaea	21154	Open in IMG/M
3300009137\|Ga0066709_100474494	Not Available	1756	Open in IMG/M
3300009618\|Ga0116127_1038510	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1426	Open in IMG/M
3300010324\|Ga0129297_10000870	All Organisms → cellular organisms → Archaea	14955	Open in IMG/M
3300010324\|Ga0129297_10002748	All Organisms → cellular organisms → Archaea → Euryarchaeota	8990	Open in IMG/M
3300010324\|Ga0129297_10114074	Not Available	1269	Open in IMG/M
3300010324\|Ga0129297_10134186	All Organisms → cellular organisms → Archaea	1157	Open in IMG/M
3300010324\|Ga0129297_10135379	Not Available	1151	Open in IMG/M
3300010324\|Ga0129297_10320463	Not Available	696	Open in IMG/M
3300010324\|Ga0129297_10414580	Not Available	600	Open in IMG/M
3300010328\|Ga0129298_10087014	All Organisms → cellular organisms → Archaea → TACK group	1483	Open in IMG/M
3300010350\|Ga0116244_10230367	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1289	Open in IMG/M
3300011270\|Ga0137391_10785540	Not Available	786	Open in IMG/M
3300012198\|Ga0137364_10093635	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300012198\|Ga0137364_10772616	Not Available	725	Open in IMG/M
3300012199\|Ga0137383_10000036	All Organisms → cellular organisms → Archaea	44190	Open in IMG/M
3300012199\|Ga0137383_11264896	Not Available	528	Open in IMG/M
3300012203\|Ga0137399_10126022	Not Available	2019	Open in IMG/M
3300012206\|Ga0137380_10001452	Not Available	19281	Open in IMG/M
3300012206\|Ga0137380_10954953	Not Available	734	Open in IMG/M
3300012206\|Ga0137380_11314156	Not Available	608	Open in IMG/M
3300012207\|Ga0137381_10532032	Not Available	1025	Open in IMG/M
3300012207\|Ga0137381_10985788	Not Available	727	Open in IMG/M
3300012207\|Ga0137381_11545296	Not Available	555	Open in IMG/M
3300012208\|Ga0137376_11083361	Not Available	685	Open in IMG/M
3300012209\|Ga0137379_10350500	Not Available	1386	Open in IMG/M
3300012211\|Ga0137377_11477662	Not Available	606	Open in IMG/M
3300012351\|Ga0137386_11039544	Not Available	581	Open in IMG/M
3300012356\|Ga0137371_10217865	Not Available	1493	Open in IMG/M
3300012356\|Ga0137371_10721481	Not Available	762	Open in IMG/M
3300012359\|Ga0137385_11200991	Not Available	620	Open in IMG/M
3300012359\|Ga0137385_11301642	Not Available	589	Open in IMG/M
3300012927\|Ga0137416_10010357	All Organisms → cellular organisms → Archaea → Euryarchaeota	5559	Open in IMG/M
3300012972\|Ga0134077_10121851	Not Available	1024	Open in IMG/M
3300012977\|Ga0134087_10378284	Not Available	684	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10499346	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	729	Open in IMG/M
3300014490\|Ga0182010_10890607	Not Available	507	Open in IMG/M
3300014491\|Ga0182014_10046537	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3048	Open in IMG/M
3300014498\|Ga0182019_10176274	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1370	Open in IMG/M
3300014502\|Ga0182021_10024154	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7192	Open in IMG/M
3300014502\|Ga0182021_10085966	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3651	Open in IMG/M
3300014502\|Ga0182021_10482173	Not Available	1477	Open in IMG/M
3300014886\|Ga0180300_10184742	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	765	Open in IMG/M
3300018019\|Ga0187874_10023816	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3143	Open in IMG/M
3300018431\|Ga0066655_10101560	All Organisms → cellular organisms → Archaea	1613	Open in IMG/M
3300020139\|Ga0197143_1055332	Not Available	887	Open in IMG/M
3300020423\|Ga0211525_10272157	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosarchaeum → Candidatus Nitrosarchaeum limnium → Candidatus Nitrosarchaeum limnium BG20	703	Open in IMG/M
3300021088\|Ga0210404_10130374	Not Available	1300	Open in IMG/M
3300021603\|Ga0226659_10158342	Not Available	1096	Open in IMG/M
3300022551\|Ga0212089_10000834	All Organisms → cellular organisms → Archaea → Euryarchaeota	22954	Open in IMG/M
3300022551\|Ga0212089_10001825	All Organisms → cellular organisms → Archaea	15971	Open in IMG/M
3300022551\|Ga0212089_10034990	Not Available	3064	Open in IMG/M
3300022551\|Ga0212089_10172510	Not Available	1086	Open in IMG/M
3300022551\|Ga0212089_10228745	Not Available	902	Open in IMG/M
3300022551\|Ga0212089_10291312	Not Available	769	Open in IMG/M
3300022551\|Ga0212089_10458101	Not Available	571	Open in IMG/M
3300024330\|Ga0137417_1116929	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1302	Open in IMG/M
3300025022\|Ga0210056_1252304	Not Available	576	Open in IMG/M
3300025546\|Ga0209225_1018404	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	3393	Open in IMG/M
3300025546\|Ga0209225_1021070	Not Available	2997	Open in IMG/M
3300025891\|Ga0209585_10472038	Not Available	519	Open in IMG/M
3300026324\|Ga0209470_1001537	All Organisms → cellular organisms → Archaea	17081	Open in IMG/M
3300027723\|Ga0209703_1305608	Not Available	563	Open in IMG/M
3300027723\|Ga0209703_1356048	Not Available	510	Open in IMG/M
3300027863\|Ga0207433_10225655	Not Available	1385	Open in IMG/M
3300028060\|Ga0255359_113350	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	808	Open in IMG/M
3300028536\|Ga0137415_10020814	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → unclassified Methanocellales → Methanocellales archaeon	6497	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1113566	Not Available	1095	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1145800	Not Available	924	Open in IMG/M
(restricted) 3300031593\|Ga0315307_1171692	Not Available	734	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1000653	Not Available	20999	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10308690	Not Available	665	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10374356	Not Available	581	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1001201	All Organisms → cellular organisms → Archaea	24041	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1001558	All Organisms → cellular organisms → Archaea	20533	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1001638	All Organisms → cellular organisms → Archaea	19795	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1002281	All Organisms → cellular organisms → Archaea	16018	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1002388	All Organisms → cellular organisms → Archaea	15566	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1003940	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	11373	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1000702	Not Available	33653	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1091833	All Organisms → cellular organisms → Archaea → Euryarchaeota	991	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1218941	Not Available	507	Open in IMG/M
3300031999\|Ga0315274_10717844	Not Available	1077	Open in IMG/M
3300032020\|Ga0315296_10128928	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1579	Open in IMG/M
3300033977\|Ga0314861_0213092	Not Available	907	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Engineered	Engineered	1.92%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.04%
Terrestrial	Environmental → Terrestrial	49.04%
Wastewater	Engineered → Wastewater	0.96%
Bioreactor	Engineered → Bioreactor	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.08%
Freshwater	Environmental → Aquatic → Freshwater	39.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.85%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.85%
Marine	Environmental → Aquatic → Marine	1.92%
Peat	Environmental → Terrestrial → Peat	0.96%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.96%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.46%
Lake	Environmental → Aquatic → Freshwater → Lake	31.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.85%
Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Loam	Environmental → Terrestrial → Soil → Loam	1.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.96%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.96%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	31.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.73%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.92%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.96%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	17.31%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	14.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.81%
Sulfidic Aquatic	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Unclassified → Sulfidic Aquatic	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.88%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.96%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.96%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring	0.96%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.96%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001446	Sulfidic aquatic microbial communities from Washburn Spring, Yellowstone National Park, USA - WS	Environmental	Open in IMG/M
3300004238	Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005236	Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80	Environmental	Open in IMG/M
3300005298	Hot spring sediment microbial communities from Great Boiling Spring, Nevada - Cellulolytic enrichment Sediment 77C	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005573	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPADES assembly)	Environmental	Open in IMG/M
3300005860	Sulfidic aquatic microbial communities from Washburn Spring, Yellowstone National Park, USA - WS (SPADES assembly)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300010324	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG	Environmental	Open in IMG/M
3300010328	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG	Environmental	Open in IMG/M
3300010350	AD_HKSTca	Engineered	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014886	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay15, Core 4569-2, 21-24 cm	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020139	Sediment microbial communities from Great Boiling Springs, Gerlach, Nevada, United States - GBS 70_MetaG	Environmental	Open in IMG/M
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021603	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules spades	Engineered	Open in IMG/M
3300022551	Boni_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025022	Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80 (SPAdes)	Environmental	Open in IMG/M
3300025546	Sulfidic aquatic microbial communities from Washburn Spring, Yellowstone National Park, USA - WS (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027863	Hot spring thermophilic microbial communities from Obsidian Pool, Yellowstone National Park, USA - OP-RAMG-01 (SPAdes)	Environmental	Open in IMG/M
3300028060	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T25	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031587 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3	Environmental	Open in IMG/M
3300031593 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP2	Environmental	Open in IMG/M
3300031604 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP4	Environmental	Open in IMG/M
3300031876 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5	Environmental	Open in IMG/M
3300031877 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9	Environmental	Open in IMG/M
3300031898 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20130J15133_10719012	3300001446	Sulfidic Aquatic	MIWVCLVRKGYRNLSIPEELYLEIERFLKDSKGRYVSVSEIVRVAIREFLDRQKQRRTS*
Ga0066635_102015401	3300004238	Groundwater	MFTMVRKGYRNLSIPEELFIELEKFVKRSKGRYVSVAEAVREAIREFLEKRKEL*
Ga0066685_100123785	3300005180	Soil	LVRKGYQNLSVPNQLYEEQERFADESKGRYVSVAEVVREAVREFLDRKQTPTKRA*
Ga0066685_106162362	3300005180	Soil	LVRKGYRNLSVPDPLYVELERFVTDSRGRYVSVAEVVREAVREFLDRKHIPGRNN*
Ga0066676_108009562	3300005186	Soil	LVRKGYRNLSVPDPLYVELERFVTDSRGRYVSVAEVVREAVREFLDRKHIPGRKN*
Ga0066636_103760861	3300005236	Groundwater	MVRKGYRNLSIPEELFIELEKFVKRSKGRYVSVAEAVREAIREFLEKRKEL*
Ga0071330_11210171	3300005298	Hot Spring	MIWGCLVRKGYRNLSIPEELYLELERFFKDSKGRYVSISEIVRVAIREFLDRQKPKTA*
Ga0070699_1001558433	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VRKGYRNLSVPNELFLELERFVTESKGRYVSVAEVVRESVREFLDKKRSGSRRS*
Ga0070697_1000054088	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LVRKGYRNLSVPDPLYMELERFVTDSRGRYVSVAEVVRDAVREFLDRKQSPSRKN*
Ga0070732_102031593	3300005542	Surface Soil	VRKGYRNLSVPNELFLELERFVTESKGRYVSVAEVVRESVREFLDK
Ga0066692_102714032	3300005555	Soil	LVRKGYRNLSVPNQLYEELESFVSESKGKYVSVAEVIREAVRDFLERKRLPTRKN*
Ga0078972_100899711	3300005573	Hot Spring	MIWGCLVRKGYRNLSIPEELYLELERFLKDSKGRYVSVSEIVRVAIREFLDRQKQRRTI*
Ga0080004_11120465	3300005860	Sulfidic Aquatic	MIWGCLVRKGYRNLSIPEELYLEIERFLKDSKGRYVSVSEIVRVAIREFLDRQKQRRTS*
Ga0066665_112072662	3300006796	Soil	LVRKGYRNLSVPNQLYEELERFANESKGRYVSVAEVVREAVREFLDKKRIVAKRT*
Ga0066710_1005525252	3300009012	Grasslands Soil	LVRKGYQNLSVPNQLYEEQERFADESKGRYVSVAEVVREAVRVVFDRK
Ga0066710_1006364193	3300009012	Grasslands Soil	LVRKGYRNLSVPNQLYEELERFADESKGRYVSVAEVVREAVREFLDRKRAVSKRW
Ga0066793_104176903	3300009029	Prmafrost Soil	MVRKGYRNLSLPEQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKKS*
Ga0105093_108533041	3300009037	Freshwater Sediment	MVRKGYRNLSIPEQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKEL*
Ga0099829_100004833	3300009038	Vadose Zone Soil	LVRKGYRNLSVPDQLYVELERFVGESKGRYVSVAEVVREAVRDFLERKRASGKKP*
Ga0066709_1004744941	3300009137	Grasslands Soil	LVRKGYRNLSVPNQLYEELERFADESKGRYVSVAEVVREAVREFLDRKRAVSKRW*
Ga0116127_10385102	3300009618	Peatland	MVRKGYRNLSSPEQLFKELEAYVEKSNGRYVSVAETVREAVREFLEKQKNP*
Ga0129297_100008701	3300010324	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEAVREAVREFLEKSKPHH*
Ga0129297_100027489	3300010324	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVRKSKGRYVSVAEVVREAVREFLEKSKLHH*
Ga0129297_101140743	3300010324	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVRE
Ga0129297_101341862	3300010324	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVREAVREFLEKSKSHH*
Ga0129297_101353792	3300010324	Lake Sediment	MVRKGYRNLSIPEQLFVELEDFVKKSKGRYVSVAEAAREAIREFLEKHKEN*
Ga0129297_103204632	3300010324	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVREA
Ga0129297_104145802	3300010324	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVREAVREFLEKSKPHH*
Ga0129298_100870143	3300010328	Lake Sediment	MVRKGYRNLSIPEQLFIELEDFVRKSKGRYVSVAEAAREAIREFLEKHKEN*
Ga0116244_102303672	3300010350	Anaerobic Digestor Sludge	MVRKGYRNLSVPDQLFKELEAFVEKSNGRYVSVAEVVREALRDFLEKKK*
Ga0137391_107855402	3300011270	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELESFVSESRGKYVSVAEVIREAVRDFLERKRLPSRKN*
Ga0137364_100936353	3300012198	Vadose Zone Soil	MVRKGYRNLSVPNQLFVELERFVSESGGRYVSVAEVIREAVRDFLERKRLPSRKN*
Ga0137364_107726161	3300012198	Vadose Zone Soil	VRKGYRNLSVPNQLYEELEAYVAASKGRYVSVAEVVREAVRDFLQKNQQHPRKN*
Ga0137383_1000003645	3300012199	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELERFVDESKGRYVSVAEVVREAVREFLDKKHSPLKRA*
Ga0137383_112648961	3300012199	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELESFVSESKGRYVSVAEVIREAVRDFLEKSRSPSRKN*
Ga0137399_101260221	3300012203	Vadose Zone Soil	LVRKGYRNLSVPNELYLELERFVAESKGRYVSVAEVIRESVREFLDNKRTPSKRTLS*
Ga0137380_1000145210	3300012206	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELERFADESKGRYVSVAEVVREAVREFLDKKHSPSKRA*
Ga0137380_109549531	3300012206	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELESFVSESKGKYVSVAEVIREAVRDFLERKRLPSRKN*
Ga0137380_113141561	3300012206	Vadose Zone Soil	RNRLVRKGYRNLSVPNQLYEELERFADESKGRYGSVAEVVREAVREFLDKRRQKRT*
Ga0137381_105320322	3300012207	Vadose Zone Soil	LVRKGYRNLSVPNELFLELERFVAESKGRYVSVAEVVRESVREFLDKKRAPSKRTLS*
Ga0137381_109857882	3300012207	Vadose Zone Soil	MVRKGYRNLSVPDQLYQELERFATESKGRYVSVAEVVREAVREFLERKHTLGKRTRQD*
Ga0137381_115452961	3300012207	Vadose Zone Soil	VRKGYRNLSVPNQLYEELEQFLADSRGRYVSVAEVVREAVREFLDRKQASPKKA*
Ga0137376_110833611	3300012208	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELESFVSESKGRYVSVAEVIREAVRDFLERKRLPSRKN*
Ga0137379_103505001	3300012209	Vadose Zone Soil	VPNQLYEELERFVTDSKGRYVSVAEVVRDAIRDFLDRKQASPKKS*
Ga0137377_114776622	3300012211	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELENFVTESKGRYVSVAEVVREAVRDFLKSDKQHSRKS*
Ga0137386_110395442	3300012351	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELESFVSESRGRYVSVAEVIREAARDFLERKRLPSKKN*
Ga0137371_102178654	3300012356	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELESFVSESKGRYVSVAEVIREAVRDFL
Ga0137371_107214811	3300012356	Vadose Zone Soil	VPNQLYEELESFVSESRGRYVSVAEVIREAARDFLERKRLPSKKN*
Ga0137385_112009911	3300012359	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELESFVSESRGKYVSVAEVVREAVRDFLQRNRSPARKT*
Ga0137385_113016422	3300012359	Vadose Zone Soil	LVRKGYRNLSVPNQLYEELERFADESKGRYGSVAEVVREAVREFLDKRRQKRT*
Ga0137416_100103572	3300012927	Vadose Zone Soil	LVRKGYRNLSVPHQLFEELETFVNDSKGRYVSVAEVVREAVREFLDKKRFPSKKA*
Ga0134077_101218511	3300012972	Grasslands Soil	LVRKGYRNLSVPNQLYEELERFADESKGRYVSVAEVVKEAVKGFLGKKHLRREFERNACAMS*
Ga0134087_103782841	3300012977	Grasslands Soil	LVRKGYQNLSVPNQLYEEQERFSDESKGRYVSVAEVVREAVREFLDRKQTPTKRA*
(restricted) Ga0172366_104993461	3300013128	Sediment	FHHFYHTKGSFNLVRKGYRNLSIPEQLFIELQNFVKQSKGKYVSVAEVVREAIREFLEEHKQA*
Ga0182010_108906071	3300014490	Fen	MVRKGYRNLSIPEQLFKELEAYVEKSNGRYVSVAETVREAVREFLEKQKEA*
Ga0182014_100465373	3300014491	Bog	LVRKGYRNLSVPDALIKELEAFVEKSNGRYVSVAEAAREAIREFLEKEKK*
Ga0182019_101762742	3300014498	Fen	MVRKGYRNLSIPEQLFKELEAFVEKSNGKYVSVAETVREAVREFLEKQKKS*
Ga0182021_100241543	3300014502	Fen	MVRKGYRNLSIPDQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQREP*
Ga0182021_100859664	3300014502	Fen	MVRKGYRNLSIPDQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKA*
Ga0182021_104821731	3300014502	Fen	MVRKGYRNLSIPEQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKEP*
Ga0180300_101847422	3300014886	Marine Sediment	MTIYEEALNLVRKGYRNLSIPEQLFIELQQFVERSKGRYVSVAEVVREAIREFLEKHKQT
Ga0187874_100238165	3300018019	Peatland	MVRKGYRNLSIPEQLFKELEAYVEKSNGRYVSVAETVREAVREFLEKQKNP
Ga0066655_101015601	3300018431	Grasslands Soil	RSFARNRLVRKGYQNLSVPNQLYEEQERFADESKGRYVSVAEVVREAVREFLDRKQTPTKRA
Ga0197143_10553321	3300020139	Sediment	MIWGCLVRKGYRNLSIPEELYLELERFFKDSKGRYVSISEIVRVAIREFLDRQKPKTA
Ga0211525_102721572	3300020423	Marine	ISVLPIPHMIEICLVRKGYRNFSIPEELYLELERFVEKSKGRYVSIAEVVRVAVREFLERQR
Ga0210404_101303743	3300021088	Soil	LVRKGYRNLSVPNELFVELERFVADSKGRYVSVAEVVRESVREFLDKKRPMAARKSQA
Ga0210409_106068463	3300021559	Soil	LSVPNELFVELERFVADSKGRYVSVAEVVRESVREFLDKKRPMAARKSQA
Ga0226659_101583422	3300021603	Granular Sludge	MVRKGYRNLSIPEQLYKEIETLVKQSNGKYVSVLEAARVAIREFLEKQKK
Ga0212089_100008346	3300022551	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVRKSKGRYVSVAEVVREAVREFLEKSKLHH
Ga0212089_100018252	3300022551	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEAVREAVREFLEKSKPHH
Ga0212089_100349905	3300022551	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVREAVREFLEKSKPHR
Ga0212089_101725102	3300022551	Lake Sediment	MVRKGYRNLSIPEQLFIELEDFVRKSKGRYVSVAEAAREAIREFLEKHKEN
Ga0212089_102287452	3300022551	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYISVAEVVREAVREFLEKSKSHH
Ga0212089_102913122	3300022551	Lake Sediment	MVRKGYRNLSIPEQLFVELEDFVKKSKGRYVSVAEAAREAIREFLEKHKEN
Ga0212089_104581012	3300022551	Lake Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVREAVREFLEKSKPHH
Ga0137417_11169292	3300024330	Vadose Zone Soil	LVRKGYRNLSVPHQLFEELETFVNDSKGRYVSVAEVVREAVREFLDKKRFPSKKA
Ga0210056_12523042	3300025022	Groundwater	MVRKGYRNLSIPEELFIELEKFVKRSKGRYVSVAEAVREAIREFLEKRKEL
Ga0209225_10184042	3300025546	Sulfidic Aquatic	MIWVCLVRKGYRNLSIPEELYLEIERFLKDSKGRYVSVSEIVRVAIREFLDRQKQRRTS
Ga0209225_10210705	3300025546	Sulfidic Aquatic	MIWGCLVRKGYRNLSIPEELYLEIERFLKDSKGRYVSVSEIVRVAIREFLDRQKQRRTS
Ga0209585_104720381	3300025891	Arctic Peat Soil	MVRKGYRNLSLPEQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKKS
Ga0209470_100153715	3300026324	Soil	LVRKGYQNLSVPNQLYEEQERFADESKGRYVSVAEVVREAVREFLDRKQTPTKRA
Ga0209703_13056082	3300027723	Freshwater Sediment	SIPEQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKEP
Ga0209703_13560482	3300027723	Freshwater Sediment	MVRKGYRNLSIPEQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKEL
Ga0207433_102256552	3300027863	Hot Spring	LVRKGYRNLSIPEQLYREIEEFMEKSKGRYVSVAEVVREAIREFVDKYK
Ga0255359_1133502	3300028060	Soil	LMVRKGYRNLSLPEQLFKELEAFVEKSNGRYVSVAETVREAVREFLEKQKEP
Ga0137415_100208146	3300028536	Vadose Zone Soil	LVRKGYRNLSVPNELYLELERFVAESKGRYVSVAEVIRESVREFLDNKRTPSKRTLS
(restricted) Ga0315308_11135662	3300031587	Sediment	LVRKGYRNLSIPEQLYLELERFVKESKGRYVSVAEAAREAIREFLEKEGPER
(restricted) Ga0315308_11458003	3300031587	Sediment	NLSIPEQLFVELEDFVKKSKGRYVSVAEAAREAIREFLEKHKEN
(restricted) Ga0315307_11716921	3300031593	Sediment	MRKHFNLVRKGYRNLSIPEQLFLDLERFISESEGKYVSVAEVVRQAVREFLDKLG
(restricted) Ga0315309_100065321	3300031604	Sediment	MVRKGYRNLSIPEQLYLELEEFVRKSKGRYVSVAEAVREAVREFLEKSKPHH
(restricted) Ga0315310_103086901	3300031876	Sediment	RKGYRNLSIPEQLFIELDDFVKKSTGRYVSVAEVVREAIREFLEKHKETTR
(restricted) Ga0315310_103743562	3300031876	Sediment	MVRKGYRNLSIPEQLFIELDDFVKKSTGRYVSVAEVVREAIREFLEKHK
(restricted) Ga0315314_100120114	3300031877	Sediment	MVRKGYRNLSIPEELFTEVEKFVKQSKGRYVSVAEAVREAIREFLEKHKEL
(restricted) Ga0315314_10015588	3300031877	Sediment	MVRKGYRNLSIPEQLFIELEDFVKKSKGRYVSVAEAVREAIREFLERRKEL
(restricted) Ga0315314_10016386	3300031877	Sediment	MVRKGYRNLSIPEQLFLELEDFVEKSKGRYVSVAETVREAIREFLDKHKEQ
(restricted) Ga0315314_10022816	3300031877	Sediment	MVRKGYRNLSIPEQLFIELEDFVKKSKGKYVSVAEAVREAIREFLEKQKEL
(restricted) Ga0315314_10023889	3300031877	Sediment	MVRKGYRNLSIPEQLFIELDDFVKKSTGRYVSVAEVVREAIREFLEKHKEP
(restricted) Ga0315314_10039404	3300031877	Sediment	MVRKGYRNLSIPEQLFTELEDFIKKSKGRYVSVAEAVREAIREFLEKHNEL
(restricted) Ga0315312_100070223	3300031898	Sediment	MVRNGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVREAVREFLEKSKPHH
(restricted) Ga0315312_10918331	3300031898	Sediment	PEQLFVELQRFVEKSEGKYISVAEVTREAIREFLEKHKHMSE
(restricted) Ga0315312_12189411	3300031898	Sediment	MVRKGYRNLSIPEQLYLELEEFVKKSKGRYVSVAEVVRESIREFLEKSKPDH
Ga0315274_107178441	3300031999	Sediment	VRKGYRNLSIPEQLFVELEELVKKSKGRYVSVAETVREAIREFLEKRKEL
Ga0315296_101289283	3300032020	Sediment	PEQLFVELEEFVEKSRGRYVSVAEVAREAIREFLEKHKES
Ga0314861_0213092_150_323	3300033977	Peatland	LARKGYRNLSIPEQPFRELEDFVEKSEGKYVSVAETVREAIREFLEKHKQPRLHEHY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters