Metagenome / Metatranscriptome Family F098022

Overview

Basic Information

• Family ID: F098022
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 104
• Average Sequence Length: 72 residues
• Representative Sequence: MKKVFPVKLLGPPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL
• Number of Associated Samples: 58
• Number of Associated Scaffolds: 104

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 15.38 %
• % of genes from short scaffolds (< 2000 bps): 73.08 %
• Associated GOLD sequencing projects: 48
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (51.923 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (42.308 % of family members)
• Environment Ontology (ENVO): Unclassified (62.500 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (88.462 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 33.66%
  β-sheet: 0.00%
  Coil/Unstructured: 66.34%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00365	PFK	33.65
PF00654	Voltage_CLC	31.73
PF02080	TrkA_C	4.81
PF08323	Glyco_transf_5	3.85
PF00483	NTP_transferase	3.85
PF02776	TPP_enzyme_N	1.92
PF02866	Ldh_1_C	0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	33.65
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	31.73
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	3.85
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	3.85
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	0.96

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
All Organisms	root	All Organisms	48.08 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
cellular organisms	root	All Organisms → cellular organisms	48.08 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.08 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	8.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.65 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.92 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.65 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	1.92 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.65 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1.92 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.65 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	1.92 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.65 %
Anaerolineaceae bacterium 4572_32.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	1.92 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002178|JGI24815J26687_1010088	Not Available	2111
3300002526|JGI24818J35693_1001783	All Organisms → cellular organisms → Bacteria	4631
3300005401|Ga0066857_10077245	All Organisms → cellular organisms → Bacteria	1191
3300005429|Ga0066846_10041178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	1670
3300005514|Ga0066866_10126135	Not Available	925
3300005521|Ga0066862_10008380	All Organisms → cellular organisms → Bacteria	4004
3300005593|Ga0066837_10242276	Not Available	638
3300005593|Ga0066837_10334202	Not Available	529
3300005948|Ga0066380_10003007	All Organisms → cellular organisms → Bacteria	3619
3300005951|Ga0066379_10005725	All Organisms → cellular organisms → Bacteria	3119
3300005951|Ga0066379_10082776	Not Available	990
3300005951|Ga0066379_10202635	Not Available	640
3300006011|Ga0066373_10007188	All Organisms → cellular organisms → Bacteria	2640
3300006011|Ga0066373_10007656	Not Available	2574
3300006166|Ga0066836_10197846	All Organisms → cellular organisms → Bacteria	1192
3300006166|Ga0066836_10249230	All Organisms → cellular organisms → Bacteria	1059
3300006166|Ga0066836_10259533	All Organisms → cellular organisms → Bacteria	1037
3300006166|Ga0066836_10406378	Not Available	821
3300006166|Ga0066836_10469477	All Organisms → cellular organisms → Bacteria	760
3300006166|Ga0066836_10486884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	745
3300006166|Ga0066836_10722844	Not Available	602
3300006902|Ga0066372_10445515	Not Available	754
3300006902|Ga0066372_11023460	Not Available	503
3300007283|Ga0066366_10117663	Not Available	1037
3300007283|Ga0066366_10171915	Not Available	877
3300007283|Ga0066366_10211266	Not Available	800
3300007283|Ga0066366_10325995	Not Available	656
3300007283|Ga0066366_10409832	Not Available	590
3300007504|Ga0104999_1034159	Not Available	2577
3300007508|Ga0105011_1017675	All Organisms → cellular organisms → Bacteria	4266
3300007508|Ga0105011_1030958	Not Available	2786
3300007509|Ga0105012_1014924	All Organisms → cellular organisms → Bacteria	5301
3300007514|Ga0105020_1058983	All Organisms → cellular organisms → Bacteria	3192
3300007514|Ga0105020_1100648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	2221
3300007514|Ga0105020_1104779	All Organisms → cellular organisms → Bacteria	2160
3300007514|Ga0105020_1186887	All Organisms → cellular organisms → Bacteria	1443
3300007514|Ga0105020_1217846	Not Available	1299
3300007514|Ga0105020_1234028	All Organisms → cellular organisms → Bacteria	1236
3300007514|Ga0105020_1265693	Not Available	1130
3300007514|Ga0105020_1267286	Not Available	1125
3300007514|Ga0105020_1310922	Not Available	1004
3300007514|Ga0105020_1338645	Not Available	935
3300007514|Ga0105020_1348004	Not Available	913
3300007515|Ga0105021_1026184	Not Available	4548
3300007515|Ga0105021_1075325	All Organisms → cellular organisms → Bacteria	2206
3300007515|Ga0105021_1130232	All Organisms → cellular organisms → Bacteria	1498
3300007515|Ga0105021_1196560	All Organisms → cellular organisms → Bacteria	1115
3300008629|Ga0115658_1021981	All Organisms → cellular organisms → Bacteria	4710
3300008629|Ga0115658_1087298	All Organisms → cellular organisms → Bacteria	1769
3300008629|Ga0115658_1122696	All Organisms → cellular organisms → Bacteria	1390
3300008629|Ga0115658_1228265	Not Available	867
3300008738|Ga0115660_1126632	All Organisms → cellular organisms → Bacteria	1200
3300008738|Ga0115660_1153877	All Organisms → cellular organisms → Bacteria	1041
3300008738|Ga0115660_1183854	All Organisms → cellular organisms → Bacteria	900
3300009104|Ga0117902_1062596	All Organisms → cellular organisms → Bacteria	4359
3300009104|Ga0117902_1348910	All Organisms → cellular organisms → Bacteria	1340
3300009104|Ga0117902_1379882	Not Available	1263
3300009104|Ga0117902_1469492	All Organisms → cellular organisms → Bacteria	1082
3300009104|Ga0117902_1546764	Not Available	958
3300009104|Ga0117902_1581563	Not Available	908
3300009108|Ga0117920_1016789	All Organisms → cellular organisms → Bacteria	4155
3300009376|Ga0118722_1069472	Not Available	2611
3300011292|Ga0138377_150223	Not Available	610
3300011322|Ga0138359_1025313	Not Available	670
3300011328|Ga0138388_1106861	Not Available	745
3300012950|Ga0163108_10521538	Not Available	768
3300020271|Ga0211631_1011912	Not Available	1761
3300020273|Ga0211629_1024753	Not Available	1233
3300020295|Ga0211530_1002314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5689
3300020324|Ga0211630_1007978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2165
3300020329|Ga0211632_1032330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1087
3300020354|Ga0211608_10002566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6499
3300020364|Ga0211538_1041849	Not Available	1456
3300020399|Ga0211623_10110784	Not Available	947
3300020423|Ga0211525_10004769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9865
3300020423|Ga0211525_10211542	Not Available	817
3300020434|Ga0211670_10066108	Not Available	1359
3300020435|Ga0211639_10027205	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2595
3300020435|Ga0211639_10052525	All Organisms → cellular organisms → Bacteria → Proteobacteria	1779
3300020443|Ga0211544_10425721	Not Available	532
3300020462|Ga0211546_10090172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1501
3300020476|Ga0211715_10376971	Not Available	696
3300020476|Ga0211715_10416119	Not Available	660
3300020477|Ga0211585_10251078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1086
3300021791|Ga0226832_10449632	Not Available	548
3300022227|Ga0187827_10448945	Not Available	787
3300026073|Ga0207961_1000577	All Organisms → cellular organisms → Bacteria	10626
3300026082|Ga0208750_1008999	All Organisms → cellular organisms → Bacteria → Proteobacteria	2600
3300026254|Ga0208522_1007593	All Organisms → cellular organisms → Bacteria	5367
3300026254|Ga0208522_1142783	Not Available	610
3300026265|Ga0208765_1082684	Not Available	852
3300026321|Ga0208764_10062094	All Organisms → cellular organisms → Bacteria	1974
3300026321|Ga0208764_10171935	All Organisms → cellular organisms → Bacteria	1085
3300026321|Ga0208764_10342068	Not Available	712
3300026321|Ga0208764_10384118	Not Available	662
3300027630|Ga0209432_1022838	All Organisms → cellular organisms → Bacteria	1753
3300027677|Ga0209019_1056107	Not Available	1216
3300027699|Ga0209752_1046019	All Organisms → cellular organisms → Bacteria	1468
3300027709|Ga0209228_1121175	Not Available	791
3300031757|Ga0315328_10139211	All Organisms → cellular organisms → Bacteria	1411
3300031773|Ga0315332_10525004	Not Available	744
3300032006|Ga0310344_11252271	Not Available	614
3300032011|Ga0315316_11617336	Not Available	506
3300032820|Ga0310342_101339264	All Organisms → cellular organisms → Bacteria	849

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	46.15%
Coastal	Environmental → Aquatic → Marine → Coastal	32.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.88%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.96%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	45.19%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	32.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.31%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.88%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.96%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.96%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	42.31%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	31.73%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	17.31%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.88%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.88%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.96%
Water Column	Environmental → Aquatic → Marine → Coastal → Unclassified → Water Column	0.96%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.96%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002178	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_150m	Environmental
3300002526	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m	Environmental
3300005401	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203	Environmental
3300005429	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76	Environmental
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental
3300007504	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate a	Environmental
3300007508	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate a	Environmental
3300007509	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate b	Environmental
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental
3300007515	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate b	Environmental
3300008629	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um	Environmental
3300008738	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um, replicate b	Environmental
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental
3300009108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate a	Environmental
3300009376	Combined Assembly of Gp0137079, Gp0137080	Environmental
3300011292	Marine microbial communities from the Southern Atlantic ocean - KN S15 250m_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental
3300011322	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 250_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental
3300011328	Marine microbial communities from the Southern Atlantic ocean - KN S17 250_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental
3300020271	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX556013-ERR599096)	Environmental
3300020273	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX556047-ERR598999)	Environmental
3300020295	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX555980-ERR599109)	Environmental
3300020324	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX555936-ERR599033)	Environmental
3300020329	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX555981-ERR599083)	Environmental
3300020354	Marine microbial communities from Tara Oceans - TARA_B100000408 (ERX555905-ERR599164)	Environmental
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental
3300020443	Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)	Environmental
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental
3300020476	Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)	Environmental
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental
3300026073	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B (SPAdes)	Environmental
3300026082	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV (SPAdes)	Environmental
3300026254	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86 (SPAdes)	Environmental
3300026265	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203 (SPAdes)	Environmental
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental
3300027630	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m (SPAdes)	Environmental
3300027677	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m (SPAdes)	Environmental
3300027699	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)	Environmental
3300027709	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_150m (SPAdes)	Environmental
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24815J26687_10100881	3300002178	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAL*
JGI24818J35693_10017833	3300002526	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV*
Ga0066857_100772452	3300005401	Marine	MKKVFPVKLLGPPRFTSPVSKWFSIKNEKFFKECFFSFKDEEQLLKDTDSFCTGTKSGHSLAENGFPAAHSAL*
Ga0066846_100411782	3300005429	Marine	MKKVFPVKLLGSPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL*
Ga0066866_101261352	3300005514	Marine	MKKVFPVKLLALPRCTSPVSKWFSIKNEKIFKECFFSFKDEEQLLKDTDSFCARTKSGHSFAETCLPAAHFSL*
Ga0066862_100083804	3300005521	Marine	MKKVFPVKILGTPRFTSPASKWFSIKNEKIFKEFFFYFKFEEQLLKDTDSFCPGTKSDHSLAETGLPATHSAL*
Ga0066837_102422761	3300005593	Marine	MKKVFPVKLLGPPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL*
Ga0066837_103342021	3300005593	Marine	MKNIFPVKLLSTPRFTSPVSKWFSIKNENIFKEFFFSFKDEEQPLKDTDSFCKGTKSGHSLAETGLPAAHSAL*
Ga0066380_100030072	3300005948	Marine	MKKVFPVKLLVAARFPFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV*
Ga0066379_100057252	3300005951	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTNSFCAGTKSGHSLAETGLPAAHSAV*
Ga0066379_100827762	3300005951	Marine	MKKVFSVKLLDLQRFTSPASKWFSIKNERFFKECFLSFKDEEQLLKDTYSFCAGTESGHSLAETGLPAAHSAL*
Ga0066379_102026352	3300005951	Marine	MKKVFPVKRLDAARFSFPASQCFSIKKERFFKEMVFTFKADERLLKDNDSFCAGTETGHSFAETGFPAAHSVV*
Ga0066373_100071883	3300006011	Marine	MKKVFPVKLLGSPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAET
Ga0066373_100076562	3300006011	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFSTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV*
Ga0066836_101978462	3300006166	Marine	MKKVFPVKLLGPPRFTSPVSKWFSIKNEKFFKECFFSFKDEEQLLKDTDSFCTGTKSGHSLAENGFPASHSAL*
Ga0066836_102492302	3300006166	Marine	MKKVFPVKLLSSPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL*
Ga0066836_102595332	3300006166	Marine	MKKVFPVKILGTPRFTSPASKWFSIKNEKFFKEFFFYFKFEEQLLKDTDSFCPGTKSDHSLAETGLPATHSAL*
Ga0066836_104063781	3300006166	Marine	MKKVFPFKLLVNTSFTPQASNWFSNKNEKFFKGCYYSYKDEEQLLKDSDLFCAGTISGHSLAETGHMPAHSAL*
Ga0066836_104694772	3300006166	Marine	MKKVFPVKLLRTHRFTSPASKWFSIENEKLFKGCLFYFKVEEQLLKDTDSFCPGTKSGHSLVDTGFPAAHSAL*
Ga0066836_104868842	3300006166	Marine	MKKVFPVKLLALPRCTSPVSKWFSIKNEKIFKECFFSFKDEEQLLKDTYSFCAGTKSGHSLAETSLPASYSAL*
Ga0066836_107228442	3300006166	Marine	MKKVFPVKILGTPRFTSPASKWFSIKNEKIFKEFFFYFKVEEQLLKDTDSFCSGTKSGHSLAETGLPATHSAL*
Ga0066372_104455152	3300006902	Marine	MKKVFPVKLLGLPRFTSPASKWFSIKNEKFFKECFFSFKDEEQLLKDTDSFCTGTKSGHSLAETGLPAAHSSL*
Ga0066372_110234601	3300006902	Marine	MKKFFPVKLMGPPRFASPASKRFSIKNEKYFKEYFFFFKDEEQLLKDTDSFCAGTKSGHSLAETCLPATHSAL*
Ga0066366_101176632	3300007283	Marine	MKKVLPVKLLGPHHFISSASKWFIIKNETFFKEFFFSFKDEEQLLKDIDSICAGTELGHSLTETGLPASHSAL*
Ga0066366_101719151	3300007283	Marine	MKKVFPVKLLGPRRFTSPGSKWFRIKNKKIFKECCFSFKVEEQLFKDTDSFCPETKSGHPLAETDLPAAHSAQ*
Ga0066366_102112662	3300007283	Marine	MKKVFPDKQLVPPGFTSHASKFFSIKNEKFFKECFLYFKVEEQLLKDTDSFCAGTKSVHSLAETSLPAAHSVL*
Ga0066366_103259952	3300007283	Marine	MKKVFPVKLLNTARFPSPATQCFSIIKRRFFKERFFAFKGEEWLLKDTDSIFTGTETGPSPAETVKLALHSAV*
Ga0066366_104098322	3300007283	Marine	MKKVFQAKLLGYPPFTSPTSKWFSIKNENFFKECFFSFKDEEQPLKDTDSFYAGTKSGHLLAETALPAAHSAL*
Ga0104999_10341593	3300007504	Water Column	MKKVFPVKLLGPPRFTSPVSKWFSIKNEKFFKECFFSFKDEEQLLKDTDSFCTGTKSGHSLAETGIPAAHSSL*
Ga0105011_10176754	3300007508	Marine	MKKVFPVKLLGPPRFTSPVSKWFSIKNEKFFKECFFSFKDEEQLLKDTDSFCAGTKSGHS
Ga0105011_10309581	3300007508	Marine	MKKVFPVKLLASPRFTSPASKWFSIKNEKFFKECFFFFKDEEQLLKDTDSFCAGTKSCHSLAETGLPVAHSAL*
Ga0105012_10149243	3300007509	Marine	MKKVFPVKLLALPCCTSPVSKWFSFKNEKFFKECFFSFKDEEQLLKDTDSFCTGTKSGHSLAETGLPAAQSAL*
Ga0105020_10589832	3300007514	Marine	MKKVFPVKLLVNPSFNPPTSNWFSTKNEKFFKGCYYSFKDEEQLLKDTDSFCAGIISWHSLTEVGHMAAHSAL*
Ga0105020_11006483	3300007514	Marine	MKKVFPIKLLVKPCYKPPASDWFSIKNEKIFKGCYYSFKDEEQLPKDTNSFCAETISGHSLAETGHMAAHSAL*
Ga0105020_11047792	3300007514	Marine	MKKVSPVKLLGVPRFNCPPSKWFSIRNEKFFKECFFSFKDKEQLLKDTYSFCAGTNSGHSLAEIGLPATHSSL*
Ga0105020_11868872	3300007514	Marine	MKKVFPVKLLVTPRFTSPASNWFSIKNEKFFKEYFFHFKVEEQLLKDTDSFFTETKSVHSLAETGLPAEHSAI*
Ga0105020_12178462	3300007514	Marine	MKKNFPVKLLVPTHFTSHASNRFSIKNEKIFKGCFFSFKDEEQLLKDTNSFCAGTISGHSLAETGHLAAHSAL*
Ga0105020_12340282	3300007514	Marine	MKKVFQAKLLDRPRFNSPASIWFSIKNEKLFKECFFTSKDEEQLLKDTSSFCERSKSGHLLAKTGPLVKHSAI*
Ga0105020_12656932	3300007514	Marine	MKKVFPTKLLVNPGFTPAASNWFGIKNENFFKGRYYSFKDQEQLLKDTDSCCAGTISGHSLTETGHMKAHSAL*
Ga0105020_12672862	3300007514	Marine	MKKGFPVKLLGPRRFTSPGSKWFRIKNKKIFKECCFSFKVGEQIFKDTDSFCPGTKSGHSLAETDLPAAHSAL*
Ga0105020_13109222	3300007514	Marine	VFPVKLLNTARFTSPATQCFSIIKRRFFKERFFAFKAEESLLKDTDSFCAGKETGHSFAETGFPAVHSAV*
Ga0105020_13386453	3300007514	Marine	MKKVFPVKLLVTPRFKPPTSNWFSIKNKKFFKVCYYSFKDEEQLLKDTDSFCAGIISGHSLTEAGHMAAHSAQ*
Ga0105020_13480042	3300007514	Marine	MKKVFLVKLLGPPRFTSTASKWFSIKNKIFFKECFFYFNVEEQLLKNTDSFCTGTKSGHSFAQTGLPAAHSAL*
Ga0105021_10261842	3300007515	Marine	MKKVFPIKLLVKPCYKPPASDWFSIKNEKIFKGCYYSFKDEEQLPKDTNSFCAETISGPSLAETGHMAAHSAL*
Ga0105021_10753252	3300007515	Marine	MKKNFQVKLLVPPHFAPSTSNWFSIKNEKIFKGCFFLFKDEEQLLKDTNSFCSGTETGHSLAETGLPLAHSAK*
Ga0105021_11302322	3300007515	Marine	MKKVSPVKLLGVPRFNCPPSKWFSIKNEKFFKECFFSFKDKEQLLKDTYSFCAGTNSGHSLAEIGLPATHSSL*
Ga0105021_11965602	3300007515	Marine	MKKVHPLKLLVNSSFTLHASNCSSIKNEKNFKECYYSFKDEEQLLKDTESFCAGIISGHSLADNDQMSAHSAL*
Ga0115658_10219813	3300008629	Marine	MKKNFPVKLLVPPHFTPHASNWFSIKNEKIFKGCFFSFKDEEQLLKDTNSFCAGTISGHSLAETGHLAAHSAL*
Ga0115658_10872982	3300008629	Marine	MKNVFPVKLLSTPRFTSPASKLFRIKNENIFKECFFSFKDEEQLLKDADSFCKGTKSGHSLAETGLPAAHSAL*
Ga0115658_11226962	3300008629	Marine	MKKVFPVKLMGPSRFTSHASKCFSIKNEKIFKECSFSFKDEEQLLKDTDSFCAGTKSGHSLAETDLPAAHSAL*
Ga0115658_12282652	3300008629	Marine	MKKVFPGTHSFTSPASKWFSIKNEKFVKECYFSFKNEEQLLKDNDSFCVGTKSGHSFAEKGLPAAHSTL*
Ga0115660_11266322	3300008738	Marine	MKKVFPVKLLGPPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSVHSLAETGLPAAHFAL*
Ga0115660_11538772	3300008738	Marine	MKKVFPVKLLGPPRFTSPVSKWFSIKNEKFFKECFFSFKDEEQLLKDTDSFCTGTKSGHSLAETGLPAAHSAL*
Ga0115660_11838542	3300008738	Marine	MKKVFPVKLLGLPRFTSHASKWFSIKIEKIFKECFFSFKDEEQLLRYTDSFFAGTKSGHSLAETGLPAAHSAL*
Ga0117902_10625963	3300009104	Marine	MKNVFPVKLLSTPRFTSPASKLFRIKNENIFKECFFSFKDEEQLLKDADSFCKGTKSGHSLAETGLSAAHSAL*
Ga0117902_13489102	3300009104	Marine	MKKVFPVKLLVKPRFTTPAPNWFSIKYKKFFKGCYYSFKDEVLLLKDTDSFCVGTISGHSLAKTGHMASHSEL*
Ga0117902_13798822	3300009104	Marine	MKKVFPVKLLVNPRFTHPASNWLSINNKKQFKVCYYSFKVEEQLLKDTDSFCAETISGHSLVETDHIAIHSAL*
Ga0117902_14694922	3300009104	Marine	MKKVFPVKLLVTPRFTSPASNWFSIKNEKFFKEYFFHFKVEEQLLKDTDSFFPETKSVHSLAETGLPAEHSAI*
Ga0117902_15467641	3300009104	Marine	MKKVFPFKLLYSACFHSPSSNWFSIKNEKFYKESFFSFKDEEQLLKDTNSFCSGTETGHSLTETGLPLSHSAI*
Ga0117902_15815631	3300009104	Marine	MKKVFPVRVLGSPCFTSLVSKWFSIKNENFFKECFFSFKDEEQLLKDTDLFCEGTKSSHSLTETCL*
Ga0117920_10167893	3300009108	Marine	MKKGFPVKLLGPRRFTSPGSKWFRIKNKKIFKECCFSYKVGEQIFKDTDTFCPETKSGHSLAETDLPAAHSAL*
Ga0118722_10694722	3300009376	Marine	MKKNFPVKLLVPPHFTPHASNWFSIKNEKIFKGCFFSFKDEEQLLKDTNSFCAGTISGYSLAETGHLAAHSAL*
Ga0138377_1502231	3300011292	Marine	MKKVFPVKLLDPPRFNSLASKWFSIKNEKFFKECFFSFKVEEQLLKDTDSFCTETKSGHSLAENVLPAADSAL*
Ga0138359_10253131	3300011322	Marine	MKKVFPVKLLGSPRFNSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL*
Ga0138388_11068611	3300011328	Marine	QANMKKVFPVKLLGPPRFTSPASKCFSIKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAV*
Ga0163108_105215381	3300012950	Seawater	MKKVFPVKLLRTHRFTSPASKWFSIKNKKLFKECLFYFKVEEQLLKDTDSFCAGTKSGHSLAETCLPAVHSAL*
Ga0211631_10119121	3300020271	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAKTGLPAAHSAV
Ga0211629_10247532	3300020273	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV
Ga0211530_10023146	3300020295	Marine	MKKVFPVKLLGPPRFTSPVSEWFSIKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHLLAETNLPAA
Ga0211630_10079782	3300020324	Marine	MKKVFPVKLLDAAHFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV
Ga0211632_10323302	3300020329	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSVV
Ga0211608_100025665	3300020354	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTETGHSFAETGLAAAHSAV
Ga0211538_10418492	3300020364	Marine	PVKLLGPPRFTSPVSKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHLLAETNLPAAHSAL
Ga0211623_101107841	3300020399	Marine	MKKVFPVKRLDAARFSFPASQCFSIIKERLFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV
Ga0211525_100047692	3300020423	Marine	MKKVFPVKLLGPPRFTSPVSEWFSIKNEKFFKECFFSFKVEEQLLKDTDSFCKGTKSGHSLAETGLPAAHSAL
Ga0211525_102115422	3300020423	Marine	MKKVFPVKLLGPPRFTSPVSKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHLLAETNLPAAHSAL
Ga0211670_100661082	3300020434	Marine	LLDAARFPFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV
Ga0211639_100272053	3300020435	Marine	MKKVFPVKLLGSPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPA
Ga0211639_100525253	3300020435	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPA
Ga0211544_104257211	3300020443	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLTETGLPAAHSAV
Ga0211546_100901722	3300020462	Marine	MKKVFPVKLLGPRRFTSPGSKWFRIKNKKIFKECCFSFKVEEQLFKDTNSFCPETKSGHPLAETDLPAAHSAQ
Ga0211715_103769712	3300020476	Marine	MKKVFPVKLLGPHHFISSASKWFIIKNETFFKEFFFSFKDEEQLLKDIDSICAGTELGHSLTETGLPASHSAL
Ga0211715_104161192	3300020476	Marine	MKKDFPVKLLALTRYSSPASKWFGIKNKKRFKECFLSFKVEEQLFKDTDSYCAGKKSGHSLAETSIPAAHSAL
Ga0211585_102510782	3300020477	Marine	MKKVFPDKQLVPPGFTSHASKFFSIKNEKFFKECFLYFKVEEQLLKDTDSFCTGTKSVHSLAETSLPAAHSVL
Ga0226832_104496322	3300021791	Hydrothermal Vent Fluids	QANMKKVLPVKLLGPHHFISSASKWFIIKNETFFKEFFFSFKDEEQLLKDIDSICAVTELGHSLTETGLPASHSAL
Ga0187827_104489451	3300022227	Seawater	ANMKKVFPVKLLGPLRFTSPVSKWFSIKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL
Ga0207961_10005774	3300026073	Marine	MKKVFPVKLLGPRRFTSPGSKWFRIKNKKIFKECCFSFKVEEQLFKDTDSFCPETKSGHPLAETDLPAAHSAQ
Ga0208750_10089992	3300026082	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFSTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV
Ga0208522_10075936	3300026254	Marine	MKKVFPVKLLGPPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL
Ga0208522_11427832	3300026254	Marine	MKKVFPVKLLGHPRFTSHASKWFSIKNEKFFKECFISFKDEEQLLKDTNSFSAGTKSGHSLAETGLPAAHSAL
Ga0208765_10826841	3300026265	Marine	SPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL
Ga0208764_100620942	3300026321	Marine	MKKVFPVKILGTPRFTSPASKWFSIKNEKFFKEFFFYFKFEEQLLKDTDSFCPGTKSGHSLAETGLPATHSAL
Ga0208764_101719352	3300026321	Marine	MKKVFPVKLLGPLRFTSPVSKWFSIKNEKFFKECFFSFKDEEQLLKDTDSFCTGTKSGHSLAENGFPASHSAL
Ga0208764_103420681	3300026321	Marine	MKKVFPFKLLVNTSFTPQASNWFSNKNEKFFKGCYYSYKDEEQLLKDSDLFCAGTISGHSLAETGHMPAHSAL
Ga0208764_103841181	3300026321	Marine	MKKVFPVKLLSSPRFTSPASKWFSFKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETGLPAAHSAL
Ga0209432_10228382	3300027630	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERLFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAV
Ga0209019_10561072	3300027677	Marine	VFPVKLLGLPRFTSHASKWFSIKNEKIFKECFFSFKDEEQLLRDTDSFCAGTKSGHSLAETGLPAAHSAL
Ga0209752_10460192	3300027699	Marine	MKKVFPVKLLGLPRFTSHASKWFSIKNEKIFKECFFSFKDEEQLLRDTDSFCAGTKSGHSLAETGLPAAHSAL
Ga0209228_11211752	3300027709	Marine	MKKVFPVKLLDAARFSFPASQCFSIIKERIFKERFFTFKAEERLLKDTDSFCAGTKSGHSLAETGLPAAHSAL
Ga0315328_101392112	3300031757	Seawater	MKKVFPVKLLGPPRFTSPVSKWFSIKNEKFFKECFFSFKVEEQLLKDTDSFCAGTKSGHSLAETCLPAVHSAL
Ga0315332_105250042	3300031773	Seawater	FPVKLLGLPLFTSPASKWFSIKNKKKFKEYFFSFKVEEQLLKDTDSFCAGTKLGHSLAETGLPAAHSAL
Ga0310344_112522712	3300032006	Seawater	QANMKKVFPGKLLVSPCFTSPASNWFSIKNEKFFKEYFFHFKVEEQLLKDTDSFFPETKSVHSLAETGLPAEHSAI
Ga0315316_116173362	3300032011	Seawater	MKKVFPVKILGTPRFTSPASKWFSIKNEKFFKEFFFYFKFEEQLLKDTDSFCPGTKSGHSLAETGLPTTHSAL
Ga0310342_1013392642	3300032820	Seawater	MKKVFPVKLLGPRRFTSPGSKWFRIKNKKIFKECCFSFKVGEQIFKDTDSFCPGTKSGHSLAETDLPAAHSAL