Metagenome Family F097867

Overview

Basic Information

• Family ID: F097867
• Family Type: Metagenome
• Number of Sequences: 104
• Average Sequence Length: 61 residues
• Representative Sequence: GEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERAKRAGQPIS
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 104

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 6.86 %
• % of genes near scaffold ends (potentially truncated): 91.35 %
• % of genes from short scaffolds (< 2000 bps): 89.42 %
• Associated GOLD sequencing projects: 91
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (98.077 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.539 % of family members)
• Environment Ontology (ENVO): Unclassified (32.692 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (48.077 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 14.29%
  β-sheet: 16.67%
  Coil/Unstructured: 69.05%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF09084	NMT1	80.77
PF00106	adh_short	3.85
PF13561	adh_short_C2	2.88
PF07883	Cupin_2	0.96
PF01904	DUF72	0.96
PF00296	Bac_luciferase	0.96
PF00528	BPD_transp_1	0.96
PF09338	Gly_reductase	0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	80.77
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	80.77
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.96
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.96

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Unclassified	root	N/A	1.92 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	74.04 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.85 %
Unclassified	root	N/A	1.92 %

Level 5

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	74.04 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.85 %
Unclassified	root	N/A	1.92 %

Level 6

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	74.04 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.85 %
Unclassified	root	N/A	1.92 %

Level 7

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	74.04 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.85 %
Unclassified	root	N/A	1.92 %

Level 8

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	74.04 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.85 %
Unclassified	root	N/A	1.92 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000858|JGI10213J12805_10105888	All Organisms → cellular organisms → Bacteria	959
3300002734|PetF_10014075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4492
3300004011|Ga0055460_10216871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600
3300004114|Ga0062593_100394373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1234
3300004463|Ga0063356_102140864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850
3300005339|Ga0070660_101025517	All Organisms → cellular organisms → Bacteria	697
3300005354|Ga0070675_101699366	All Organisms → cellular organisms → Bacteria	582
3300005444|Ga0070694_100167904	All Organisms → cellular organisms → Bacteria	1615
3300005445|Ga0070708_100886488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838
3300005451|Ga0066681_10192171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1218
3300005457|Ga0070662_100317355	All Organisms → cellular organisms → Bacteria	1270
3300005526|Ga0073909_10205729	All Organisms → cellular organisms → Bacteria	853
3300005535|Ga0070684_100459575	All Organisms → cellular organisms → Bacteria	1177
3300005536|Ga0070697_100968647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756
3300005549|Ga0070704_101928854	All Organisms → cellular organisms → Bacteria	548
3300005564|Ga0070664_100530855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1087
3300005577|Ga0068857_100607620	All Organisms → cellular organisms → Bacteria	1034
3300005719|Ga0068861_100287719	All Organisms → cellular organisms → Bacteria	1418
3300005842|Ga0068858_101192355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748
3300005844|Ga0068862_101227985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749
3300006058|Ga0075432_10507712	All Organisms → cellular organisms → Bacteria	538
3300006173|Ga0070716_101677805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524
3300006196|Ga0075422_10038013	All Organisms → cellular organisms → Bacteria	1704
3300006804|Ga0079221_10317374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	923
3300006846|Ga0075430_100923157	All Organisms → cellular organisms → Bacteria	719
3300006853|Ga0075420_101705448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539
3300006871|Ga0075434_100073046	All Organisms → cellular organisms → Bacteria	3422
3300006871|Ga0075434_100178596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2142
3300006876|Ga0079217_10048130	All Organisms → cellular organisms → Bacteria	1697
3300006903|Ga0075426_11158523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586
3300006914|Ga0075436_101384831	All Organisms → cellular organisms → Bacteria	533
3300006954|Ga0079219_10255409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1047
3300007076|Ga0075435_100019392	All Organisms → cellular organisms → Bacteria	5195
3300009147|Ga0114129_13508701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501
3300009156|Ga0111538_10038938	All Organisms → cellular organisms → Bacteria	6135
3300009162|Ga0075423_12156113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605
3300009609|Ga0105347_1541379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507
3300010036|Ga0126305_10268751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1101
3300010046|Ga0126384_10032485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3477
3300010358|Ga0126370_12218647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541
3300010400|Ga0134122_11414764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710
3300011119|Ga0105246_11428983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647
3300011410|Ga0137440_1086737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631
3300011436|Ga0137458_1261398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527
3300011437|Ga0137429_1148523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726
3300012359|Ga0137385_11427193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556
3300012361|Ga0137360_10396749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1162
3300012479|Ga0157348_1032870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504
3300012495|Ga0157323_1052683	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500
3300012498|Ga0157345_1009592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	829
3300012499|Ga0157350_1035248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575
3300012517|Ga0157354_1096064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502
3300012582|Ga0137358_10238344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1239
3300012922|Ga0137394_10254937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1500
3300012930|Ga0137407_11530694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635
3300012951|Ga0164300_10439145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729
3300014301|Ga0075323_1062318	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747
3300014884|Ga0180104_1010118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2175
3300015256|Ga0180073_1114482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582
3300015373|Ga0132257_102901053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625
3300015374|Ga0132255_100789389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1415
3300015374|Ga0132255_101950621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893
3300016387|Ga0182040_10029959	All Organisms → cellular organisms → Bacteria	3169
3300017936|Ga0187821_10298664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639
3300018000|Ga0184604_10207515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674
3300018059|Ga0184615_10081011	All Organisms → cellular organisms → Bacteria	1819
3300018063|Ga0184637_10486126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720
3300018064|Ga0187773_10417480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	781
3300018071|Ga0184618_10199645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835
3300018075|Ga0184632_10050313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1798
3300018082|Ga0184639_10311889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	825
3300018082|Ga0184639_10448753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660
3300018422|Ga0190265_10787052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1074
3300018433|Ga0066667_11259084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645
3300018466|Ga0190268_10090890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1383
3300019885|Ga0193747_1037309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1210
3300020198|Ga0194120_10307997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791
3300021073|Ga0210378_10067217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1407
3300022756|Ga0222622_10088549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1871
3300022756|Ga0222622_10901313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648
3300025310|Ga0209172_10421489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631
3300025907|Ga0207645_10567066	All Organisms → cellular organisms → Bacteria	770
3300025916|Ga0207663_10498442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	946
3300025919|Ga0207657_11064705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619
3300025926|Ga0207659_11095814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685
3300026035|Ga0207703_11121679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756
3300026116|Ga0207674_10675229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	997
3300026323|Ga0209472_1189939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720
3300027390|Ga0207435_103707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617
3300027818|Ga0209706_10510151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548
3300027831|Ga0209797_10295381	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674
3300028145|Ga0247663_1100955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527
3300028380|Ga0268265_10997698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	827
3300031719|Ga0306917_10832467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723
3300032205|Ga0307472_100074154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2233
3300032205|Ga0307472_100794088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	864
3300032205|Ga0307472_101112297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	748
3300032261|Ga0306920_102512030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708
3300032770|Ga0335085_11287265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772
3300032829|Ga0335070_10345326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1433
3300034115|Ga0364945_0255449	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541
3300034354|Ga0364943_0120968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	927

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.31%
Host-Associated	Host-Associated	32.69%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	46.15%
Plants	Host-Associated → Plants	31.73%
Aquatic	Environmental → Aquatic	21.15%
Porifera	Host-Associated → Porifera	0.96%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.23%
Sediment	Environmental → Aquatic → Sediment	14.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Freshwater	Environmental → Aquatic → Freshwater	4.81%
Floodplain	Environmental → Terrestrial → Floodplain	1.92%
Marine	Environmental → Aquatic → Marine	0.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Unclassified	Host-Associated → Porifera → Unclassified	0.96%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.62%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.92%
Lake	Environmental → Aquatic → Freshwater → Lake	0.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.96%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified	0.96%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified	0.96%

Habitat

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.73%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.85%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.96%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Petrosia Ficiformis	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Petrosia Ficiformis	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental
3300002734	Microbial sample from Petrosia ficiformis	Host-Associated
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental
3300027390	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-11 (SPAdes)	Environmental
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_101058881	3300000858	Soil	TLTDQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPLHLTEDYVDRAKLAGIADRQLSGK*
PetF_100140755	3300002734	Petrosia Ficiformis	MLDTGDMLWIPPGCSHRNIGDMLTTRIILYTRNPLTLSQEYSSRAERVAGAA*
Ga0055460_102168712	3300004011	Natural And Restored Wetlands	IPPGTSHRNIGDMATIRIILYTRKPVRLADEYIDRARRAGLAAA*
Ga0062593_1003943731	3300004114	Soil	GDFLLIPPGTSHRNVGEMATIRIILYTRKPVRLADEFIERARRAGQAAA*
Ga0063356_1021408642	3300004463	Arabidopsis Thaliana Rhizosphere	MLETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIERAKRAGQPIA*
Ga0070660_1010255171	3300005339	Corn Rhizosphere	IAFQLSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0070675_1016993661	3300005354	Miscanthus Rhizosphere	IYHRGFGQDEVAFQLSGQRATLTSQGEYMLDTGDFLLIPPGTSHRNIGNMATIRIILYTRKPVRLADEYIERAKRAEQPIT*
Ga0070694_1001679043	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RTNQGEYMLETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIHRAKRAGQPIV
Ga0070708_1008864881	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIERAKRAGQPIS*
Ga0066681_101921712	3300005451	Soil	TGDFLLIPPGTSHRNIGDMATIRIILYTKKPVRLADEFIDRAKRAGQAIS*
Ga0070662_1003173552	3300005457	Corn Rhizosphere	GDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS*
Ga0073909_102057291	3300005526	Surface Soil	MLETGDFLLIPPGTSHRNVGDMATIRIILDTRKPVRLADEYIERAQRAGQPVP*
Ga0070684_1004595752	3300005535	Corn Rhizosphere	TRTNQGEYMLETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIHRAKRAGQPIV*
Ga0070697_1009686472	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GRRATLTNQGEYMLDTGNFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERARQAGQSIS*
Ga0070704_1019288541	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS*
Ga0070664_1005308552	3300005564	Corn Rhizosphere	EIAFQLSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0068857_1006076201	3300005577	Corn Rhizosphere	QGEYMLETGDFLLIPPGTSHRNVGDMETIRIILYTRKPVRLADEFIHRAKRAGQPIV*
Ga0068861_1002877193	3300005719	Switchgrass Rhizosphere	LIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS*
Ga0068858_1011923551	3300005842	Switchgrass Rhizosphere	LETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIHRAKRAGQPIV*
Ga0068862_1012279851	3300005844	Switchgrass Rhizosphere	SGQRATLTSQGEYMLDTGDFLLIPPGTSHRNIGNMATIRIILYTRKPVRLADEYIERAKRAEQPIT*
Ga0075432_105077122	3300006058	Populus Rhizosphere	GEYMLETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIERAKRAGQPIV*
Ga0070716_1016778052	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLETGDFLLIPPGTSHRNIGDIATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0075422_100380133	3300006196	Populus Rhizosphere	QGEYMLDTGDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS*
Ga0079221_103173742	3300006804	Agricultural Soil	ATRTNQGEYMLETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIHRAKRAGQPIV*
Ga0075430_1009231571	3300006846	Populus Rhizosphere	IAFQLYGQRATRTSQGDYMLDTADFLLIPPGTSHRNIGDMATIRIILYTRKSVRLADEYTERVKRAGQTVT*
Ga0075420_1017054482	3300006853	Populus Rhizosphere	FQLSGQRATRTTQGEYMLDTGDFLLIPPGTSHRNVGDMATIRIILYTRNPLRLADEYVERAKRLEQAVT*
Ga0075434_1000730465	3300006871	Populus Rhizosphere	AFQLSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0075434_1001785964	3300006871	Populus Rhizosphere	TRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIDRAKRAGQPLA*
Ga0079217_100481301	3300006876	Agricultural Soil	TGDFLLIPPGTSHRNIGDMTTIRIILYSRKPLRLADEFIERAKRAGQSVGN*
Ga0075426_111585232	3300006903	Populus Rhizosphere	IPPGTSHRNIGDMATIRIILYTRKPVRLADEFIDRAKRAGQPLA*
Ga0075436_1013848312	3300006914	Populus Rhizosphere	QLSGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTKKPVRLADEFIERAKRAGQAIS*
Ga0079219_102554091	3300006954	Agricultural Soil	AFQLSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAQRAGRPIAA*
Ga0075435_1000193927	3300007076	Populus Rhizosphere	FLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIDRAKRAGQPLA*
Ga0114129_135087011	3300009147	Populus Rhizosphere	GRRATLTNQGEYMLEPGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERARQAGQSIS*
Ga0111538_100389382	3300009156	Populus Rhizosphere	MLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIDRAKRAGQPLA*
Ga0075423_121561131	3300009162	Populus Rhizosphere	RATLTNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERARQAGQSIS*
Ga0105347_15413791	3300009609	Soil	QLTGQRATRTSQGDFMLDTADFLLIPPGTSHRNIGDMATIRVILYTRKTVRLADEYIERAKRMGQAI*
Ga0126305_102687511	3300010036	Serpentine Soil	QGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYIERARRAGQATA*
Ga0126384_100324854	3300010046	Tropical Forest Soil	MLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYVERAKRAE*
Ga0126370_122186472	3300010358	Tropical Forest Soil	TNQGEYMLETGDFLLIPPGTSHRNVGDMATIRIILYTRNPLRLADEYVERAKRAEQAA*
Ga0126381_1038761701	3300010376	Tropical Forest Soil	SGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVHLADEYIERAKRAGKLSSQYEARDAHEVL*
Ga0134122_114147641	3300010400	Terrestrial Soil	NQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0105246_114289832	3300011119	Miscanthus Rhizosphere	GRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0137440_10867371	3300011410	Soil	HRGFGQDEIAFQLSGQRATRTSQGDYMLDTADFLLIPPGTSHRNIGDMATIRIILYTRKSVRLADEYIDRAKRAGSPVA*
Ga0137458_12613982	3300011436	Soil	LDTADFLLIPPGTSHRNIGDMATIRIILYTRKPLRLADEFVERSKRAGQPIS*
Ga0137429_11485233	3300011437	Soil	FGQDEVAFQLSGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYIERAKRAESPILS*
Ga0137385_114271932	3300012359	Vadose Zone Soil	SGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTKKPVRLADEFIDRAKRAGQAIS*
Ga0137360_103967491	3300012361	Vadose Zone Soil	GQDEVAFQLSGRRATLTSQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLAAEYVERARQGGQSIS*
Ga0157348_10328701	3300012479	Unplanted Soil	RATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0157323_10526831	3300012495	Arabidopsis Rhizosphere	LTNQGEYMLDTGDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS
Ga0157345_10095922	3300012498	Arabidopsis Rhizosphere	TNQGEYMLDTGDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS*
Ga0157350_10352482	3300012499	Unplanted Soil	EIAFQLSGRRATLTNQGEYMLDTGDFLLIPPVTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS*
Ga0157354_10960641	3300012517	Unplanted Soil	AFQLSGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS*
Ga0137358_102383441	3300012582	Vadose Zone Soil	DEVAFQLSGRRATLTNQGEYMLETGDFPLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIERAKRAGQPVS*
Ga0137394_102549371	3300012922	Vadose Zone Soil	GRRATLTSQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERARQAGQSIS*
Ga0137407_115306941	3300012930	Vadose Zone Soil	QGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIDRAKRAGQAIS*
Ga0164300_104391452	3300012951	Soil	GFGQDEIAFQLSGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYAERAKRASQPIS*
Ga0126369_100969791	3300012971	Tropical Forest Soil	DEIAFQLSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVHLADEYIERAKRAGKLSSQYEARDAHEVL*
Ga0075323_10623181	3300014301	Natural And Restored Wetlands	NQGEYTLDTGDFLLIPPGTSHRNIGDMATIRIILYTKNPLRLADEFVERAGRAGQPIN*
Ga0180104_10101184	3300014884	Soil	DFLLIPPGTSHRNIGDTATIRIILYARNPLRLADEYVERAKRVGAPI*
Ga0180073_11144822	3300015256	Soil	AFQLSGQRATRTSQGDYMLDTADFLLIPPGTSHRNIGDMATIRIILYTRKPLRLADEYVERAKRAGSPI*
Ga0132257_1029010531	3300015373	Arabidopsis Rhizosphere	GRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTKKPVRLADEFIDRAKRAGQAIS*
Ga0132255_1007893893	3300015374	Arabidopsis Rhizosphere	TRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA*
Ga0132255_1019506211	3300015374	Arabidopsis Rhizosphere	GPRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAQRAGRPIAA*
Ga0182040_100299591	3300016387	Soil	FLLIPPGTSHRNIGDMATIRIILYTRRPVRLADEFIERAKRAGQPMPRGC
Ga0187821_102986641	3300017936	Freshwater Sediment	AFQLSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLAGEFIERAKRAGQSFA
Ga0184604_102075152	3300018000	Groundwater Sediment	QLSGQRATLTSQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYIERAKRAGQPITKAA
Ga0184615_100810113	3300018059	Groundwater Sediment	QLSGRRATLTNQGEYMLETGDFLLIPPGTSHRNIGDTATIRIILYARNPLRLADEYVERAKRAGSPI
Ga0184637_104861261	3300018063	Groundwater Sediment	QDEIAFQLSGQRATRTSQGDYMLDTADFLLIPPGTSHRNIGEMATIRIILYTRKSVRLADEYIARAKQAGLPVG
Ga0187773_104174801	3300018064	Tropical Peatland	QRATRTNQGDYMLDTADFLLIPPGTSHRNIGDMATIRIILYTRNSVRLAEEYIDRARRAGQPI
Ga0184618_101996451	3300018071	Groundwater Sediment	ATLTSQGEYMLNAGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYIERAKRAGQPITKAA
Ga0184632_100503131	3300018075	Groundwater Sediment	TLTSQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERARQAGQSI
Ga0184639_103118892	3300018082	Groundwater Sediment	TLTSQGEYMLETGDFLLIPPGTSHRNVGDMATIRIILYTRKPLRLADEYVERAKRAG
Ga0184639_104487531	3300018082	Groundwater Sediment	SQGEYMLETGDFLLIPPGTSHRNIGDTATIRIILYTRKPVRLAEEYIERAKLAG
Ga0190265_107870522	3300018422	Soil	LIPPGTSHRNIGDMATIRIILYTRKSVRLADEYLERARRAGQPASLTR
Ga0066667_112590843	3300018433	Grasslands Soil	TNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTKKPVRLADEFIDRAKRAGQAIS
Ga0190268_100908903	3300018466	Soil	GDFLLIPPGTSHRNIGDMATIRIILYTRKPLRLADEFVERAKRAGQPGA
Ga0193747_10373091	3300019885	Soil	HRGFGQDEVAFQLSGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTKKPVRLADEFIDRAKRAGQAIS
Ga0194120_103079973	3300020198	Freshwater Lake	GQRATRTNQGDYMLDTADFLLIPPGTSHRNIGDMATIRVILYTRNSVRLADEYVARAKQAGIKIY
Ga0210378_100672173	3300021073	Groundwater Sediment	GEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERAKRAGQPIS
Ga0222622_100885493	3300022756	Groundwater Sediment	DEVAFQLSGRRATLTSQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERARQAGQSIS
Ga0222622_109013131	3300022756	Groundwater Sediment	MLDTGDFLLIPPGTSHRNIGEMATIRIILYTRNPVRLADEYVERAKRAGQPIS
Ga0209172_104214892	3300025310	Hot Spring Sediment	LSGRRATLTNQGEYMLETCDFLLIPPGTSHRNIGDMATIRIILYARKPLRLADEYVERARRAGMPI
Ga0207645_105670662	3300025907	Miscanthus Rhizosphere	MAVRATRTDQGEYMLDTGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEYIERARRAGQAAA
Ga0207663_104984421	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA
Ga0207657_110647051	3300025919	Corn Rhizosphere	IAFQLSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRSGRPIAA
Ga0207659_110958142	3300025926	Miscanthus Rhizosphere	MLETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIHRAKRAGQPIV
Ga0207703_111216792	3300026035	Switchgrass Rhizosphere	LETGDFLLIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIHRAKRAGQPIV
Ga0207674_106752291	3300026116	Corn Rhizosphere	RTNQGEYMLETGDFLLIPPGTSHRNVGDMETIRIILYTRKPVRLADEFIHRAKRAGQPIV
Ga0209472_11899392	3300026323	Soil	TGDFLLIPPGTSHRNIGDMATIRIILYTKKPVRLADEFIDRAKRAGQAIS
Ga0207435_1037072	3300027390	Soil	LIPPGTSHRNVGDMATIRIILYTRKPVRLADEFIHRAKRAGQPIV
Ga0209706_105101511	3300027818	Freshwater Sediment	MLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLAGEYMERAERAGQPIA
Ga0209797_102953811	3300027831	Wetland Sediment	ETGDFLLIPPGTSHRNVGDMATIRIILYTRNPVRLADEYIDRARRAGQAAA
Ga0247663_11009552	3300028145	Soil	FLLIPPGTSHRNIGEMATIRVILYTRKPVRLADEYIERAKQAGRPVA
Ga0268265_109976981	3300028380	Switchgrass Rhizosphere	LSGQRATLTSQGEYMLDTGDFLLIPPGTSHRNIGNMATIRIILYTRKPVRLADEYIERAKRAEQPIT
Ga0306917_108324672	3300031719	Soil	LSGRRATRTNQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRNPVRLADEYIERAKRAGATHCRVDQG
Ga0307472_1000741543	3300032205	Hardwood Forest Soil	LTNQGEYMLETGDFLLIPPGTSHRNIGDLATIRIILYTKNPVRLADEYVERAQRAGQAI
Ga0307472_1007940881	3300032205	Hardwood Forest Soil	GQDEVAFQLSGRRATLTSQGEYMLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIERAKRAGQPIS
Ga0307472_1011122971	3300032205	Hardwood Forest Soil	RGFGQDEVAFQLSGRRATLTNQGEYMLDTGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYVERARQAGQSIS
Ga0306920_1025120302	3300032261	Soil	LIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIERAKRAGQPVL
Ga0335085_112872652	3300032770	Soil	YMLETGDFLLIPPGTSHRNVGDMATIRIILYTRNPVRLADEYFDRAKRAGQPI
Ga0335070_103453263	3300032829	Soil	NQGEYMLETGDFLLIPPGTSHRNVGDIATIRIILYTRTPVRLADEFIERAKRAGQPIS
Ga0364945_0255449_40_201	3300034115	Sediment	MLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEYIERARQAGQSIS
Ga0364943_0120968_695_856	3300034354	Sediment	MLETGDFLLIPPGTSHRNIGDMATIRIILYTRKPVRLADEFIERAKRAGQPVP