Metagenome / Metatranscriptome Family F097738

Basic Information
Family ID	F097738
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	48 residues
Representative Sequence	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTF
Number of Associated Samples	77
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.08 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (33.654 % of family members)
Environment Ontology (ENVO)	Unclassified (29.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.33% β-sheet: 0.00% Coil/Unstructured: 62.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01656	CbiA	7.69
PF01637	ATPase_2	2.88
PF00589	Phage_integrase	1.92
PF03551	PadR	1.92
PF11138	DUF2911	0.96
PF14659	Phage_int_SAM_3	0.96
PF07883	Cupin_2	0.96
PF07729	FCD	0.96
PF02696	SelO	0.96
PF13586	DDE_Tnp_1_2	0.96
PF08238	Sel1	0.96
PF13358	DDE_3	0.96
PF11721	Malectin	0.96
PF13649	Methyltransf_25	0.96
PF08299	Bac_DnaA_C	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1373	Predicted ATPase, AAA+ superfamily	General function prediction only [R]	2.88
COG1672	Predicted ATPase, archaeal AAA+ ATPase superfamily	General function prediction only [R]	2.88
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.92
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.92
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.92
COG0397	Protein adenylyltransferase (AMPylase) SelO/YdiU (selenoprotein O)	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.96
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.96
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	1.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %
Unclassified	root	N/A	1.92 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	63.46 %
Unclassified	root	N/A	1.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	62.50 %
Unclassified	root	N/A	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.96 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	55.77 %
Unclassified	root	N/A	1.92 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.96 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	0.96 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	21.15 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	19.23 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	11.54 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.92 %
Unclassified	root	N/A	1.92 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	21.15 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	19.23 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	9.62 %
Unclassified	root	N/A	1.92 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.96 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.96 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	21.15 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	19.23 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	9.62 %
Unclassified	root	N/A	1.92 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.96 %
Granulicella sp. L60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	0.96 %
Granulicella mallensis MP5ACTX8	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis → Granulicella mallensis MP5ACTX8	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10270941	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300004092\|Ga0062389_100549985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1311	Open in IMG/M
3300004152\|Ga0062386_100245406	All Organisms → cellular organisms → Archaea → Euryarchaeota	1418	Open in IMG/M
3300004152\|Ga0062386_100550683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300004152\|Ga0062386_101352219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	593	Open in IMG/M
3300006176\|Ga0070765_100128212	All Organisms → cellular organisms → Bacteria → Acidobacteria	2235	Open in IMG/M
3300006795\|Ga0075520_1409282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	544	Open in IMG/M
3300006893\|Ga0073928_10343550	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300009633\|Ga0116129_1119713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	756	Open in IMG/M
3300009644\|Ga0116121_1300653	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010043\|Ga0126380_11709197	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010339\|Ga0074046_10261917	Not Available	1071	Open in IMG/M
3300010866\|Ga0126344_1436466	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300014151\|Ga0181539_1030421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2801	Open in IMG/M
3300014160\|Ga0181517_10168810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1217	Open in IMG/M
3300014160\|Ga0181517_10480403	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300014169\|Ga0181531_10612793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	675	Open in IMG/M
3300014199\|Ga0181535_10039805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	3352	Open in IMG/M
3300014494\|Ga0182017_10805069	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300014495\|Ga0182015_10264090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1133	Open in IMG/M
3300014496\|Ga0182011_10921191	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300014501\|Ga0182024_10216798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2599	Open in IMG/M
3300014501\|Ga0182024_12652551	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300014657\|Ga0181522_10837855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	565	Open in IMG/M
3300014658\|Ga0181519_10231401	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300016387\|Ga0182040_11976812	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300017970\|Ga0187783_10188979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1515	Open in IMG/M
3300017970\|Ga0187783_10532479	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300018020\|Ga0187861_10223374	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300018035\|Ga0187875_10734533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	518	Open in IMG/M
3300018042\|Ga0187871_10600321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	611	Open in IMG/M
3300018043\|Ga0187887_10651950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	622	Open in IMG/M
3300020203\|Ga0163148_10149153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	1393	Open in IMG/M
3300020580\|Ga0210403_11147910	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300021403\|Ga0210397_10021498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	3971	Open in IMG/M
3300021404\|Ga0210389_10731747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	774	Open in IMG/M
3300021477\|Ga0210398_10331987	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300026356\|Ga0257150_1031124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis → Granulicella mallensis MP5ACTX8	767	Open in IMG/M
3300026364\|Ga0247848_103863	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300026502\|Ga0255350_1140174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	502	Open in IMG/M
3300027895\|Ga0209624_10809496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	615	Open in IMG/M
3300028068\|Ga0255355_1034795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	851	Open in IMG/M
3300028560\|Ga0302144_10082163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1033	Open in IMG/M
3300028873\|Ga0302197_10024170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	3940	Open in IMG/M
3300028873\|Ga0302197_10108341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1390	Open in IMG/M
3300028873\|Ga0302197_10130142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1233	Open in IMG/M
3300028874\|Ga0302155_10163248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	978	Open in IMG/M
3300028874\|Ga0302155_10264634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	743	Open in IMG/M
3300028906\|Ga0308309_10058525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2816	Open in IMG/M
3300028909\|Ga0302200_10272938	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300028909\|Ga0302200_10527711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	535	Open in IMG/M
3300029883\|Ga0311327_10361052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	924	Open in IMG/M
3300029907\|Ga0311329_10137951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1951	Open in IMG/M
3300029908\|Ga0311341_10481150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	709	Open in IMG/M
3300029908\|Ga0311341_10854879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	501	Open in IMG/M
3300029910\|Ga0311369_10883601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	715	Open in IMG/M
3300029911\|Ga0311361_10703797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	925	Open in IMG/M
3300029914\|Ga0311359_10742711	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300029914\|Ga0311359_11000349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	564	Open in IMG/M
3300029915\|Ga0311358_10583749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	848	Open in IMG/M
3300029915\|Ga0311358_10859189	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300029922\|Ga0311363_10149579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2999	Open in IMG/M
3300029922\|Ga0311363_11216056	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300029922\|Ga0311363_11216921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	633	Open in IMG/M
3300029939\|Ga0311328_10770290	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300029939\|Ga0311328_10827787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	616	Open in IMG/M
3300029951\|Ga0311371_11339104	Not Available	813	Open in IMG/M
3300029953\|Ga0311343_10188835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2162	Open in IMG/M
3300029953\|Ga0311343_11013707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	651	Open in IMG/M
3300030051\|Ga0302195_10456587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	548	Open in IMG/M
3300030051\|Ga0302195_10462197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	544	Open in IMG/M
3300030503\|Ga0311370_11138305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	853	Open in IMG/M
3300030503\|Ga0311370_12194818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	543	Open in IMG/M
3300030506\|Ga0302194_10413366	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300030520\|Ga0311372_11675387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	769	Open in IMG/M
3300030618\|Ga0311354_11911736	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300030677\|Ga0302317_10253002	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300030687\|Ga0302309_10189341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1061	Open in IMG/M
3300030688\|Ga0311345_10209666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1964	Open in IMG/M
3300031236\|Ga0302324_102506801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	630	Open in IMG/M
3300031258\|Ga0302318_10477417	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300031261\|Ga0302140_10060081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4072	Open in IMG/M
3300031261\|Ga0302140_10375594	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1159	Open in IMG/M
3300031261\|Ga0302140_10749777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	705	Open in IMG/M
3300031261\|Ga0302140_10838632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	651	Open in IMG/M
3300031524\|Ga0302320_12010569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	541	Open in IMG/M
3300031524\|Ga0302320_12045429	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	535	Open in IMG/M
3300031525\|Ga0302326_11088081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1112	Open in IMG/M
3300031708\|Ga0310686_114567847	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300031726\|Ga0302321_102314633	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031788\|Ga0302319_10299293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1889	Open in IMG/M
3300031788\|Ga0302319_11113234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	739	Open in IMG/M
3300031788\|Ga0302319_11283213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	669	Open in IMG/M
3300032605\|Ga0316232_1282148	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300032805\|Ga0335078_12702489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	506	Open in IMG/M
3300032805\|Ga0335078_12742219	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300032895\|Ga0335074_10254265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2063	Open in IMG/M
3300032896\|Ga0335075_11488090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	564	Open in IMG/M
3300032898\|Ga0335072_10791747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	908	Open in IMG/M
3300033134\|Ga0335073_10580166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1258	Open in IMG/M
3300033134\|Ga0335073_10866086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	957	Open in IMG/M
3300033134\|Ga0335073_11116754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	801	Open in IMG/M
3300033402\|Ga0326728_10253018	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300033982\|Ga0371487_0205107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	939	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.77%
Aquatic	Environmental → Aquatic	19.23%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	51.92%
Soil	Environmental → Terrestrial → Soil	28.85%
Freshwater	Environmental → Aquatic → Freshwater	18.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	51.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.62%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	51.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.92%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	33.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.96%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020203	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP7.P2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026364	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T50	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028068	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T75	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097738

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_102709412	3300001593	Forest Soil	MLNMTIKPGPFYGRKLELAALDRAWKRHRAGGQMLLLYGRRRLGKTFLL
Ga0062389_1005499852	3300004092	Bog Forest Soil	MAIWPIPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRR
Ga0062386_1002454061	3300004152	Bog Forest Soil	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQ
Ga0062386_1005506831	3300004152	Bog Forest Soil	MATKPLPDMTITPDPFYNRKLELAALNRAWKRHGAGGQMLLLYGRRRLGKTFLLQRY
Ga0062386_1013522191	3300004152	Bog Forest Soil	MPNMTNKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRR
Ga0070765_1001282121	3300006176	Soil	MPDITIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLY
Ga0075520_14092821	3300006795	Arctic Peat Soil	MTIKPDPFYDRTLELAALDRAWKRRGAGGQMLLLYGRRRLGKT
Ga0073928_103435502	3300006893	Iron-Sulfur Acid Spring	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQR*
Ga0116129_11197132	3300009633	Peatland	MTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYG
Ga0116121_13006531	3300009644	Peatland	MPGMTIKPNPFYNRTFELEALDRAWKRQGAGGQMLLLYGRRRLGKTFLLQRYFTAG
Ga0126380_117091972	3300010043	Tropical Forest Soil	MPGTTLKPDPFYNRALELVALNRAWKRHGSRGQMLLLYGRRRLGKTFLLQRYF
Ga0074046_102619171	3300010339	Bog Forest Soil	MPSSTIKPDPFYNRALELAALDRAWKRHGAGGQMLLL
Ga0126344_14364661	3300010866	Boreal Forest Soil	MRSSTIKPDPFYNRALELAALDRAWKRHGAGGQMLLLY
Ga0181539_10304211	3300014151	Bog	MPGMTIKPNPFYNRTFELAALDRAWKRQGAGGQMLL
Ga0181517_101688102	3300014160	Bog	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQ
Ga0181517_104804031	3300014160	Bog	MTFKPDPFHDRTMELQALERAWRRPGTGGQMMLVYGRRRLGKTYLLQRYFTAGVNG
Ga0181531_106127931	3300014169	Bog	MPSKTIKPDPFYDRTLELAALDRAWKRHGAGGQMLLLYGRRRL
Ga0181535_100398056	3300014199	Bog	MPGTTIKPDPFYDRTLEPAALDRAWKRHGAGGQMLLLYGRRRLGK
Ga0182017_108050692	3300014494	Fen	MPGMTIKPNPFYNRTFELAALDRAWKRQGAGGQMLLLYGRRRLGKTFLLRRYFTAGVS
Ga0182015_102640901	3300014495	Palsa	MPDMTIKPDPFYDRKLELVALDRAWKRHGAGGQMLLLYGRRRLGKTFLL
Ga0182011_109211911	3300014496	Fen	MPGMTIKPNPFYNRTFELAALDRAWKRQGAGGQMLLLYGRRRLGKTFLLQRYFTADVS
Ga0182024_102167984	3300014501	Permafrost	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYF
Ga0182024_126525511	3300014501	Permafrost	MPGMTIKPDPFYDRMLELAALDRAWKRHGAGGQMLLLYGRRRLGK
Ga0181522_108378552	3300014657	Bog	MTIKPDPFYDRKLELAALDRAWNRHGAGGQMLLLYGRRR
Ga0181519_102314011	3300014658	Bog	MLPTTFKPKPFYNRVRELTALDRARKRHGSGGQMLLLFGRRRLGKTFLLQRCITAGVGGTSRKW
Ga0182040_119768122	3300016387	Soil	MPGTTKPDPFYNRALELAALDRAWKRHGAGGQILLLYGRRRLGKT
Ga0187783_101889793	3300017970	Tropical Peatland	MPGIAIKPDPFYNRVRELAALDRAWKRHGSGGQMLLLYGRRRLGK
Ga0187783_105324792	3300017970	Tropical Peatland	MPGITIKPDPFYNRVRELAALDRAWKRHGSGGQMLLLYGRRRLGK
Ga0187861_102233742	3300018020	Peatland	MTVKPDPFYNRTLELAALDRAWKRRGAGGQMLLLYGRRRLGKTFLLQRYFT
Ga0187875_107345331	3300018035	Peatland	MANSPMPDMTIKPDPFYNRKLELAGLDRAWKRHGAGGQMLL
Ga0187871_106003211	3300018042	Peatland	MTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKT
Ga0187887_106519502	3300018043	Peatland	MSNMTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLL
Ga0163148_101491533	3300020203	Freshwater Microbial Mat	MSFPTIAPDPFFNRTAELAALDRAWRQRGAGGQMALLYGRRRLGKTY
Ga0210403_111479101	3300020580	Soil	MPDITIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLERYFTA
Ga0210397_100214981	3300021403	Soil	MPDITIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLE
Ga0210389_107317471	3300021404	Soil	MTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGVDG
Ga0210398_103319872	3300021477	Soil	MSTQPVLGMTIKPDPFFDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTA
Ga0257150_10311241	3300026356	Soil	MPNSTIKPDPFYNRALELAALDRAWKRHGAGGLMLLLYGRRRLGKTFLLQR
Ga0247848_1038632	3300026364	Soil	MPSSTMKPDPFYDRTRELAALDRAWTRHGNGGQMLLLYGRRRLGKT
Ga0255350_11401741	3300026502	Soil	MTIKPDPFYDRTLELAALDRAWKRRGTGGQMLLLYGRRRLGKTFL
Ga0209624_108094961	3300027895	Forest Soil	MHNMAIKPNPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTF
Ga0255355_10347952	3300028068	Soil	MTDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQ
Ga0302144_100821631	3300028560	Bog	MTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLLYGRRRLGKTFL
Ga0302197_100241705	3300028873	Bog	VDQKGTVIQPMSNMTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLLYGRRRLGKTFL
Ga0302197_101083413	3300028873	Bog	MSNMTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLLYGRRRLGKTFL
Ga0302197_101301422	3300028873	Bog	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGV
Ga0302155_101632483	3300028874	Bog	MSNMTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLLYGRRRV
Ga0302155_102646342	3300028874	Bog	MTIKPDPFYDRTLELAALDRAWKRRGTGGQMLLLYGRRRLGKTFLLQRYFTAGLS
Ga0308309_100585255	3300028906	Soil	MPDITIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRR
Ga0302200_102729383	3300028909	Bog	MPGMTIKPNPFYNRTFELAALDRAWKRQGAGGQMLLLYGR
Ga0302200_105277111	3300028909	Bog	MATKPVPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGVDGDG
Ga0311327_103610521	3300029883	Bog	MATKPVPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLL
Ga0311329_101379515	3300029907	Bog	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQML
Ga0311341_104811501	3300029908	Bog	MATKPVPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTA
Ga0311341_108548792	3300029908	Bog	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQR
Ga0311369_108836012	3300029910	Palsa	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFT
Ga0311361_107037972	3300029911	Bog	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRL
Ga0311359_107427111	3300029914	Bog	MPGMTIKPDPFYNRTLELTALDRAWKRHLTGGQMLLLYGRRRLG
Ga0311359_110003491	3300029914	Bog	MTIKPDPFYDRTLELAALDRAWKRRGTGGQMLLLY
Ga0311358_105837491	3300029915	Bog	MPDMTIKPDPFYNRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYF
Ga0311358_108591891	3300029915	Bog	MPDMTIKPDPFHDRKLELAALDRAWKRYGPGGQML
Ga0311363_101495791	3300029922	Fen	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTA
Ga0311363_112160561	3300029922	Fen	MTIKPDPFHDRTMELQALERAWRRPGTGGQMMLVYGRRRLGKTYLLQRYF
Ga0311363_112169212	3300029922	Fen	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTGGVDWDERE
Ga0311328_107702901	3300029939	Bog	MPDMTIKPDPFHDRKLELAALDRAWKRYGPGGQMLLLYGR
Ga0311328_108277871	3300029939	Bog	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTF
Ga0311371_113391041	3300029951	Palsa	MSEMTIKPDPFYDRKLELAALDRAWTRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGIDGDEH
Ga0311343_101888355	3300029953	Bog	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGVDGDGHE
Ga0311343_110137071	3300029953	Bog	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGVD
Ga0302195_104565871	3300030051	Bog	MATKPVPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRL
Ga0302195_104621972	3300030051	Bog	MTIKPDPFYDRTLELAALDRAWKRRGTGGQMLLLYGRRR
Ga0311370_111383051	3300030503	Palsa	MTDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQR
Ga0311370_121948181	3300030503	Palsa	VPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGVDGDGH
Ga0302194_104133661	3300030506	Bog	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGVDGDGHEK
Ga0311372_116753871	3300030520	Palsa	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLG
Ga0311354_119117361	3300030618	Palsa	MPGMSIKPDPFYDRALELAALDRSWKRPPPGGQMLLL
Ga0302317_102530021	3300030677	Palsa	MPTFKPDPFYNRTAELAALDRAWTRHGSGGQMMLLYGRRRLG
Ga0302309_101893411	3300030687	Palsa	MWTRRGSIQAMSNMTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLLYGRRR
Ga0311345_102096661	3300030688	Bog	MTIKPDPFYDRTLELAALDRAWKRRGTGGQMLLLYGRRRL
Ga0302324_1025068011	3300031236	Palsa	MTDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKT
Ga0302318_104774171	3300031258	Bog	MPDMTIKPDPFHDRKLELAALDRAWKRYGPGGQMLLL
Ga0302140_100600816	3300031261	Bog	MSNMTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLLYGRRRL
Ga0302140_103755941	3300031261	Bog	MTIKPDPFYDRTLELAALDRAWKRRGAGGQMLLLYGRRRLGKTFL
Ga0302140_107497772	3300031261	Bog	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTGGVDG
Ga0302140_108386322	3300031261	Bog	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRR
Ga0302320_120105691	3300031524	Bog	MPGTTIKPDPFYDRTLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAG
Ga0302320_120454291	3300031524	Bog	MATQLTPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLL
Ga0302326_110880811	3300031525	Palsa	MPDMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFT
Ga0310686_1145678471	3300031708	Soil	MTIERMPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRL
Ga0302321_1023146331	3300031726	Fen	MPSSTMKPDPFYDRTRELAALDRAWTRHGNGGQMLLLYGRRRLG
Ga0302319_102992931	3300031788	Bog	MTIKPDPFYDRKLELSALDRAWKRHGAGGQMLLLYGRRRLG
Ga0302319_111132341	3300031788	Bog	MPGTTIKPDPFYDRTLELAALDRAWKRHGAGGQMLLLYGRRRLGKTF
Ga0302319_112832132	3300031788	Bog	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTFLLQRYFTAGVDG
Ga0316232_12821481	3300032605	Freshwater	MTIKPDPFYDRKHELAALDRACKRRGQGGQLMLVYGRRRLGKTFL
Ga0335078_127024892	3300032805	Soil	MPNMTIKPDPFYDRKLELAALDRAWKRHGAGGQMLLLYGRRRLGKTF
Ga0335078_127422191	3300032805	Soil	MPSNSMPCTTIKPDPFYNRLHELAALDRAWRRHGSGGQMLLLYGRRRLGKTFLLQRYFTAGAGGDE
Ga0335074_102542651	3300032895	Soil	MPSSTIKPDPFYDRTVELAALDRAWKRHGNGGQMLLLYGRRRLGKTFLLQRYFT
Ga0335075_114880901	3300032896	Soil	MPGSTIKPDPFYDRTVELAALDRAWKRHGNGGQMLLLYGRRRLGKTF
Ga0335072_107917472	3300032898	Soil	MPGSTIKPDPFYDRTVELAALDRAWKRHGNGGQMLL
Ga0335073_105801663	3300033134	Soil	MPSSTIKPDPFYDRTVELAALDRAWKRHGNGGQMLLLYGRRRLGKTFLLQRYFTAGVTG
Ga0335073_108660861	3300033134	Soil	MPGSTIKPDPFYDRTVELAALDRAWKRHGNGGQMLLLYGRR
Ga0335073_111167541	3300033134	Soil	MTGSTIKPDPFYDRTVELAALDRAWKRHGNGGQMLLLYGRRRLGKTFLLQRYF
Ga0326728_102530184	3300033402	Peat Soil	MPGTTIKPDPFYDRTLELAALDRAWKRRGTGGQMLLLYGRRRL
Ga0371487_0205107_3_182	3300033982	Peat Soil	MPGMTIKPDPFYDRKLELSALDRAWKRHRAGGQMLLLYGRRRLGKTFLLQRYFTAGVDGK

Hidden Markov Model


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