Metagenome Family F097154

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097154
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	90 residues
Representative Sequence	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARAESYRPETEVKENLYKEFTA
Number of Associated Samples	71
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.47 %
% of genes near scaffold ends (potentially truncated)	22.12 %
% of genes from short scaffolds (< 2000 bps)	72.12 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.423 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (41.346 % of family members)
Environment Ontology (ENVO)	Unclassified (89.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.85% β-sheet: 0.00% Coil/Unstructured: 49.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00856	SET	9.62
PF00476	DNA_pol_A	2.88
PF02867	Ribonuc_red_lgC	1.92
PF14279	HNH_5	1.92
PF13884	Peptidase_S74	0.96
PF00589	Phage_integrase	0.96
PF00127	Copper-bind	0.96
PF00383	dCMP_cyt_deam_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	2.88
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	1.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
All Organisms	root	All Organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
cellular organisms	root	All Organisms → cellular organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.65 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.50 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	6.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.50 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	12.50 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.73 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	12.50 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.73 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	1.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	12.50 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.73 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	1.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	12.50 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.73 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	1.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	12.50 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.73 %
unclassified Blastopirellula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula	1.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	12.50 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	6.73 %
Blastopirellula sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	1.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.92 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000265\|LP_A_09_P04_10DRAFT_1000259	All Organisms → cellular organisms → Bacteria	19580	Open in IMG/M
3300001460\|JGI24003J15210_10010283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3803	Open in IMG/M
3300001460\|JGI24003J15210_10065508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1152	Open in IMG/M
3300001460\|JGI24003J15210_10141094	Not Available	629	Open in IMG/M
3300001939\|GOS2225_1021083	Not Available	1102	Open in IMG/M
3300001973\|GOS2217_10069882	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2240	Open in IMG/M
3300006735\|Ga0098038_1072283	Not Available	1219	Open in IMG/M
3300006737\|Ga0098037_1081432	Not Available	1136	Open in IMG/M
3300006737\|Ga0098037_1226230	Not Available	605	Open in IMG/M
3300006737\|Ga0098037_1251669	Not Available	566	Open in IMG/M
3300006921\|Ga0098060_1009459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3209	Open in IMG/M
3300006921\|Ga0098060_1066792	Not Available	1043	Open in IMG/M
3300007544\|Ga0102861_1167794	Not Available	598	Open in IMG/M
3300007670\|Ga0102862_1064133	Not Available	901	Open in IMG/M
3300007972\|Ga0105745_1303101	Not Available	522	Open in IMG/M
3300007974\|Ga0105747_1072385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1046	Open in IMG/M
3300009056\|Ga0102860_1222214	Not Available	543	Open in IMG/M
3300009433\|Ga0115545_1160004	Not Available	782	Open in IMG/M
3300009508\|Ga0115567_10661540	Not Available	627	Open in IMG/M
3300012936\|Ga0163109_10600967	Not Available	805	Open in IMG/M
3300013782\|Ga0120045_100085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1603	Open in IMG/M
3300017706\|Ga0181377_1022556	Not Available	1365	Open in IMG/M
3300017706\|Ga0181377_1026847	Not Available	1218	Open in IMG/M
3300017706\|Ga0181377_1084630	Not Available	561	Open in IMG/M
3300017708\|Ga0181369_1054839	Not Available	885	Open in IMG/M
3300017709\|Ga0181387_1030014	Not Available	1065	Open in IMG/M
3300017710\|Ga0181403_1002695	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	4014	Open in IMG/M
3300017710\|Ga0181403_1022363	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1340	Open in IMG/M
3300017713\|Ga0181391_1006098	All Organisms → cellular organisms → Bacteria	3203	Open in IMG/M
3300017713\|Ga0181391_1030436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1316	Open in IMG/M
3300017713\|Ga0181391_1138877	Not Available	540	Open in IMG/M
3300017713\|Ga0181391_1141615	Not Available	534	Open in IMG/M
3300017714\|Ga0181412_1091737	Not Available	721	Open in IMG/M
3300017714\|Ga0181412_1154434	Not Available	515	Open in IMG/M
3300017719\|Ga0181390_1015975	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300017719\|Ga0181390_1043140	Not Available	1355	Open in IMG/M
3300017725\|Ga0181398_1036960	Not Available	1194	Open in IMG/M
3300017725\|Ga0181398_1038104	Not Available	1175	Open in IMG/M
3300017725\|Ga0181398_1062495	Not Available	895	Open in IMG/M
3300017728\|Ga0181419_1049991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1093	Open in IMG/M
3300017730\|Ga0181417_1061499	Not Available	914	Open in IMG/M
3300017735\|Ga0181431_1016832	All Organisms → cellular organisms → Archaea	1714	Open in IMG/M
3300017741\|Ga0181421_1001335	Not Available	7395	Open in IMG/M
3300017741\|Ga0181421_1068995	Not Available	929	Open in IMG/M
3300017742\|Ga0181399_1010744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2677	Open in IMG/M
3300017742\|Ga0181399_1115182	Not Available	659	Open in IMG/M
3300017743\|Ga0181402_1191083	Not Available	510	Open in IMG/M
3300017744\|Ga0181397_1004942	All Organisms → cellular organisms → Bacteria	4380	Open in IMG/M
3300017744\|Ga0181397_1057120	Not Available	1069	Open in IMG/M
3300017744\|Ga0181397_1063088	Not Available	1007	Open in IMG/M
3300017749\|Ga0181392_1004210	All Organisms → cellular organisms → Bacteria	5038	Open in IMG/M
3300017752\|Ga0181400_1160633	Not Available	634	Open in IMG/M
3300017752\|Ga0181400_1187934	Not Available	574	Open in IMG/M
3300017760\|Ga0181408_1013504	All Organisms → cellular organisms → Archaea	2294	Open in IMG/M
3300017763\|Ga0181410_1047981	Not Available	1317	Open in IMG/M
3300017763\|Ga0181410_1060870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1141	Open in IMG/M
3300017763\|Ga0181410_1225803	Not Available	508	Open in IMG/M
3300017765\|Ga0181413_1020986	Not Available	2049	Open in IMG/M
3300017770\|Ga0187217_1175896	Not Available	711	Open in IMG/M
3300017771\|Ga0181425_1049564	Not Available	1368	Open in IMG/M
3300017776\|Ga0181394_1059298	Not Available	1272	Open in IMG/M
3300017776\|Ga0181394_1230827	Not Available	557	Open in IMG/M
3300017779\|Ga0181395_1077786	Not Available	1072	Open in IMG/M
3300017781\|Ga0181423_1057582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1546	Open in IMG/M
3300017781\|Ga0181423_1090441	Not Available	1203	Open in IMG/M
3300017781\|Ga0181423_1206612	Not Available	742	Open in IMG/M
3300017783\|Ga0181379_1008209	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	4435	Open in IMG/M
3300017783\|Ga0181379_1026911	Not Available	2298	Open in IMG/M
3300020260\|Ga0211588_1000328	Not Available	6996	Open in IMG/M
3300020385\|Ga0211677_10326303	Not Available	609	Open in IMG/M
3300020403\|Ga0211532_10000747	Not Available	23515	Open in IMG/M
3300020418\|Ga0211557_10000602	All Organisms → cellular organisms → Bacteria	27053	Open in IMG/M
3300020421\|Ga0211653_10010847	All Organisms → cellular organisms → Bacteria	4470	Open in IMG/M
3300020438\|Ga0211576_10014457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	4907	Open in IMG/M
3300020438\|Ga0211576_10075552	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	1887	Open in IMG/M
3300020438\|Ga0211576_10516895	Not Available	601	Open in IMG/M
3300020439\|Ga0211558_10268033	Not Available	804	Open in IMG/M
3300020440\|Ga0211518_10052420	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2331	Open in IMG/M
3300020442\|Ga0211559_10001885	All Organisms → cellular organisms → Bacteria	12187	Open in IMG/M
3300020452\|Ga0211545_10065341	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	1738	Open in IMG/M
3300020453\|Ga0211550_10257241	Not Available	818	Open in IMG/M
3300020462\|Ga0211546_10000200	Not Available	32515	Open in IMG/M
3300020462\|Ga0211546_10091545	Not Available	1490	Open in IMG/M
3300020469\|Ga0211577_10107286	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1930	Open in IMG/M
3300021335\|Ga0213867_1004214	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	6219	Open in IMG/M
3300021373\|Ga0213865_10210643	Not Available	955	Open in IMG/M
3300025086\|Ga0208157_1000761	All Organisms → cellular organisms → Bacteria	16328	Open in IMG/M
3300025099\|Ga0208669_1054623	Not Available	904	Open in IMG/M
3300025101\|Ga0208159_1000582	All Organisms → cellular organisms → Bacteria	14416	Open in IMG/M
3300025120\|Ga0209535_1009983	All Organisms → cellular organisms → Bacteria	5411	Open in IMG/M
3300025120\|Ga0209535_1088064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1151	Open in IMG/M
3300025120\|Ga0209535_1126939	Not Available	854	Open in IMG/M
3300025120\|Ga0209535_1185546	Not Available	606	Open in IMG/M
3300025132\|Ga0209232_1001652	All Organisms → cellular organisms → Bacteria	11765	Open in IMG/M
3300025168\|Ga0209337_1061495	Not Available	1893	Open in IMG/M
3300025483\|Ga0209557_1032704	Not Available	1491	Open in IMG/M
3300027213\|Ga0208555_1057467	Not Available	599	Open in IMG/M
3300028194\|Ga0257106_1069578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1299	Open in IMG/M
3300028194\|Ga0257106_1241908	Not Available	607	Open in IMG/M
3300031519\|Ga0307488_10295807	Not Available	1045	Open in IMG/M
3300031851\|Ga0315320_10278215	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1202	Open in IMG/M
3300032073\|Ga0315315_10678184	Not Available	946	Open in IMG/M
3300032088\|Ga0315321_10689550	Not Available	594	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	41.35%
Oceanic	Environmental → Aquatic → Marine → Oceanic	27.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.38%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.65%
Coastal	Environmental → Aquatic → Marine → Coastal	4.81%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	41.35%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	25.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.81%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.85%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.92%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	41.35%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	24.04%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.38%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.85%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.92%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.92%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.92%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.92%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.96%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.96%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000265	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001939	Marine microbial communities from Block Island, New York, USA - GS009	Environmental	Open in IMG/M
3300001973	Marine microbial communities from Bermuda, Atlantic Ocean - GS001	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300013782	Marine microbial communites from Sargasso Sea - Prochlorococcus B258 surface rep 1	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300020260	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556087-ERR599025)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020418	Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020453	Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025483	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300027213	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 (SPAdes)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LP_A_09_P04_10DRAFT_100025910	3300000265	Marine	VVDRRRLRAGDSYTPKWRGPALAKQRAAQYKFNQSRKPFRTEQTPGTQGVPYGGTAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETEVKEELYKEFTS*
JGI24003J15210_100102837	3300001460	Marine	VVDRRRLXAGDSYTPNRRGPALAKQRAAQYRYNQSRKPFRTEQEPGSGGFTGGLGTQIMRNQMASYNKKRSESYRPETEVKENLYKEFTS*
JGI24003J15210_100655084	3300001460	Marine	VVDRRRLRAGDSYTPNRRGPALAKQRAAAFMYDQQRKPFRTEQNPGTQGVPYGGAAGGAFSGFKGGLGTQIMRNQMASYNKARSESYRPETEVKENLYKEFTS*
JGI24003J15210_101410942	3300001460	Marine	AGDSYTPNRRGPALAKQRAAAFMYDQQRKPFRTEQNPGTQGVPYGGAAGGAFSGFKGGLGTQIMRNQMASYNKARSESYRPETEVKETCTRNLRLKPLA*
GOS2225_10210832	3300001939	Marine	VVDRRRLRQGDSYTPNRRGPALAKQRAAQYRYNQSRKPFRTEQAPGTGGFTGGLGTQIMRNQMASYNKARSESFRPETEVKENLYKEFTS*
GOS2217_100698821	3300001973	Marine	VAVDRRRLRKGDSYVQSSRGPALAKQRAAAYRYRKQAQPFRTEQNPGTGGFGSGLETQIMRNYQRQYDRERAESLKPETEIQASILDKIKS
Ga0098038_10722833	3300006735	Marine	ISKDKESIVAVDRRRLRKGDSYVQTSRGPALAKQRAAAYRYNKQYKPYRTEQSPGTQGVPYDPTLRGGFGGFKGGLFTQQMRNQTTKFDRERAESLRPENEIQQSILKKIKTA*
Ga0098037_10814323	3300006737	Marine	VVDRRRLRQGDTYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGRETQIMRNQMASYDKARAESFRPETEVKENLYKEFTA*
Ga0098037_12262302	3300006737	Marine	VAVDRRRLRKGDSYVQTSRGPALAKQRAAAYRYNKQYKPYRTEQSPGTQGVPYDPTLRGGFGGFKGGLFTQQMRNQTTKFDRERAESLRPENEIQQSILKKIKTA*
Ga0098037_12516692	3300006737	Marine	VAVDRRRLRKGDSYVQTSRGPALAKQRAAAYRYRKQSEPFRTEQSPGTGGFGSGLETQIQRNYIRQFDRERAESLRPENEIQQSILNKIKTA*
Ga0098060_10094592	3300006921	Marine	VVDRRRLRQGDSYTPSQRGPAVAKQRAAQYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGNFKGGLFTQQMRNQMASYDKARAESYRPETEVKDNLYKEFTA*
Ga0098060_10667922	3300006921	Marine	VVDRRRLRAGDSYTPEGRGPALAKQRAAQYRFNLSREPFRTEQAPGTGGFGSGLETQIMRNQQTAADNERSESYRPETFKYKEN*
Ga0102861_11677942	3300007544	Estuarine	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARAESYRPETQVKENLYKEFTA*
Ga0102862_10641332	3300007670	Estuarine	RQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKERAESYRPETQVKENLYKEFTA*
Ga0105745_13031011	3300007972	Estuary Water	VVDRRRLRQGDSYTPSGRGPALAKQRAAAYKFNQSRKPFRTEQTPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA*
Ga0105747_10723851	3300007974	Estuary Water	VVDRRRLRQGDSYTPSRRGPALAKQRAAAYKFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARAESYRPETQVK
Ga0102860_12222142	3300009056	Estuarine	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARAESYRPETQ
Ga0115545_11600043	3300009433	Pelagic Marine	VVDRRRLRAGDSYTPKSRGPAIAKQRAAQYRFDAQRQPFRTEQSPGTGGFGSGLETQIMRNQEASYNKARSESYRPETFKYKNVRQLD*
Ga0115567_106615403	3300009508	Pelagic Marine	VVDRRRLRAGDSYTPKSRGPAIAKQRAAQYRFDAQRQPFRTEQSPGTGGFGSGLETQIMRNQEASYDRARSESYRPETFKYKNVRQLD*
Ga0163109_106009672	3300012936	Surface Seawater	VAVDRRRLRKGDSYVQTSRGPALAKQRAAAYRYRKQSEPFRTEQSPGTGGFGSGLETQIQRNYNRQFDRERAESLRPENEIQQSILNKIKTA*
Ga0120045_1000852	3300013782	Marine	VAVDRRRLRKGDSYTPTSRGPALAKQRAASYRYNKQYKPFRTEQSPGTGGFGSGLETQIMRNQTKQFDRERAESLRPETEIQQSILDKIKTAGYQD*
Ga0181377_10225562	3300017706	Marine	VVDRRRLRAGDYYTPSQRGPALAKQRAAQYRFNQSRKPFRTEQTPGTGGFGSGLETQIMRNQEAAGDKARAESFRPETEVKENLYKEFTS
Ga0181377_10268472	3300017706	Marine	VTVDRRFLKAGDSYTPNLRGPAIAKQRAAQFKFDAQREPFRTEQAPGTGGIGTGRETQIMRNQMASYEKARAESFRPETEINQKFYTEQTS
Ga0181377_10846302	3300017706	Marine	VVDRRRLRQGDTYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGRETQIMRNQMASYDKARAESFRPETEVKENLYKEFTA
Ga0181369_10548392	3300017708	Marine	VVDRRRLRQGDSYTPSQRGPAVAKQRAAQYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETEVKDNLYKEFTA
Ga0181387_10300142	3300017709	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQTPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181403_10026954	3300017710	Seawater	VVDRRRLRSGDSYTSKSRGPAIAKQRAAQYRFNAQRQPFRTEQSPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181403_10223634	3300017710	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKEN
Ga0181391_10060984	3300017713	Seawater	VVDRRRLRAGDSYTPKSRGPAIAKQRAAQYRFNAQRQPFRTEQSPGTGGFGSGLETQIMRNQEASYDKARSESYRPETFKYKNVRQLD
Ga0181391_10304363	3300017713	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181391_11388771	3300017713	Seawater	VVDRRRLRQGDSYTPSQRGPALAKQRAAAYKYSNNRKPFRTEQKPGTQGVPYGGPAGGGFGNFKGGLFTQQMRNQMVSYDKARAESYRPETQVKENLYKEFTA
Ga0181391_11416152	3300017713	Seawater	VVDRRRLRAGDSYTPEWRGAALAKQRAAQYRFNQSREPFRTEQSPGTGGFGSGLETQIMRNQNKSYEKTRAESYRPETLKYKDLKQYV
Ga0181412_10917372	3300017714	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKERAESYRPETQVKENLYKEFTA
Ga0181412_11544342	3300017714	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAAYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETQVKENLYKEFTA
Ga0181390_10159755	3300017719	Seawater	VVDRRRLRAGDSYTPKSRGPAIAKQRAAQYRFNAQRQPSRTEQSPGTGGFGSGLETQIMRNQEASYDKARSESYRPETFKYKNVRQLD
Ga0181390_10431403	3300017719	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAAYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQIASYDKARAESYRPETEVKENLYKEFTA
Ga0181373_10356723	3300017721	Marine	VVDRRRLRQGDSYTPSQRGPAVAKQRAAQYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMAS
Ga0181398_10369603	3300017725	Seawater	VTVDRRYLRAGDSYTPDLRGPAIAKQRAAQFKFDAQREPFRTEQTPGTGGFGAGLETQIMRNQMASYEKARSESYRPETEINRDFYKEQTS
Ga0181398_10381042	3300017725	Seawater	VVDRRRLRAGDSYTPEWRGAALAKQRAAQYRFDQSREPFRTEQSPGTGGFGSGLNTQIMRNKNASYEKTRAESYRPETLKYKDLKQYI
Ga0181398_10624952	3300017725	Seawater	VVDRRRLRQGDTYTPSRRGPAIAKQRAAQYRFNQSRKPFRTEQTPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181419_10499913	3300017728	Seawater	VVDRRRLRSGDSYTSKSRGPAIAKQRAAQYRFNAQRQPFRTEQSPGTGGFGSGLETQIMRNQQASYDKARSESYRP
Ga0181417_10614994	3300017730	Seawater	VVDRRRLRAGDSYTPKSRGPAIAKQRAAQYRFNAQRQPFRTEQSPGTGGFGSGLETQIMRNQEASYDKARSE
Ga0181431_10168321	3300017735	Seawater	TPSRRGPALAKQRAAAYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETQVKENLYKEFTA
Ga0181421_10013353	3300017741	Seawater	VTVDRRYLRAGDSYTPDLRGPAIAKQRAAQFKFDSQREPFRTEQTPGTGGFGAGLETQIMRNQMASYEKARSESYRPETEINRDFYKEQTS
Ga0181421_10689953	3300017741	Seawater	VVDRRRLRAGDSYTPEWRGAALAKQRAAQYRFDQSREPFRTEQSPGTGGFGSGLETQIMRNQNKSYEKTRAESYRPETLKYKDLKRFV
Ga0181399_10107443	3300017742	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAAYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETEVKENLYKEFTA
Ga0181399_11151822	3300017742	Seawater	LRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181402_11910832	3300017743	Seawater	VVDRRRLRAGDSYTPEWRGAALAKQRAAQYRFDQSREPFRTEQAPGTGGFGSGLETQIMRNQNKSYEKTRAESYRPETLKYQDIKQLV
Ga0181397_10049424	3300017744	Seawater	VVDRRRLRQGDTYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQTPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181397_10571202	3300017744	Seawater	VVDRRRLRQGDSYTPSQRGPALAKQRAAAYKYSNNRKPFRTEQKPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETEVKENLYKEFTA
Ga0181397_10630882	3300017744	Seawater	VVDRRRLRAGDSYTPNSRGPALAKQRAAQYRYNQSREPFRTEQSPGTGGFTGGLQTQVMRNQMASYNKARSESYRPETEIKQDLYKAFRA
Ga0181392_10042109	3300017749	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAAYKFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181400_11606332	3300017752	Seawater	VVDRRRLRAGDSYTPEWRGVALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKERAESYRPETQVKENLYKEFTA
Ga0181400_11879342	3300017752	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAAYRFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETQVKENLYKEFTA
Ga0181408_10135041	3300017760	Seawater	RRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARAESYRPETEVKENLYKEFTA
Ga0181410_10479813	3300017763	Seawater	SRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKERAESYRPETQVKENLYKEFTA
Ga0181410_10608703	3300017763	Seawater	VVDRRRLRAGDSYTPEWRGAALAKQRAAQYRFNQSREPFRTEQTPGTGGFGSGLETQIMRNQNKSYEKTRAES
Ga0181410_12258031	3300017763	Seawater	VVDRRRLRAGDSYTPEWRGAALAKQRAAEYRFNQSREPFRTEQAPGTGGFGSGLETQIMRNQNKSYEKARAESYRPETLKYQDIKQLV
Ga0181413_10209863	3300017765	Seawater	VVDRRRLRSGDSYTSKSRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0187217_11758961	3300017770	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAAYKFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARSESYRP
Ga0181425_10495643	3300017771	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGRETQIMRNQMASYDKARAESYRPETEVKENLYKEFTA
Ga0181394_10592981	3300017776	Seawater	TSKSRGPAIAKQRAAQYRFNAQRQPFRTEQSPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181394_12308272	3300017776	Seawater	VTSDRRYIRAGDSYTPDLRGPAIAKQRAAQYKYNAQREPFRTEQTPGTGGFGSGLETQIMRNQMASYEKARSESYRPETEINRDFYKEQTS
Ga0181395_10777861	3300017779	Seawater	GDTYTPSRRGPAIAKQRAAQYRFNQSRKPFRTEQTPGTGGFGSGLETQIMRNQMASYDKARSESYRPETEVKENLYKEFTA
Ga0181423_10575824	3300017781	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARSKSYRPETEVKENLYKEFTA
Ga0181423_10904412	3300017781	Seawater	VVDRRRLRAGDSYTPEWRGAALAKQRAAEYRFNQSREPFRTEQSPGTGGFGSGLETQIMRNQNKSYEKTRAESYRPETLKYKDLKRFV
Ga0181423_12066122	3300017781	Seawater	VVDRRRLRQGDSYTPNSRGPALAKQRAAQYRYNQSRKPFRTEQIPGTGGFTGGLGTQVMRNQMASYNKARSESYRPETEVNQNLYEAFTD
Ga0181379_10082098	3300017783	Seawater	VTVDRRYLRAGDSYTPDLRGPAIAKQRAAQFKFDSQREPFRTEQTPGTGGFGSGLETQIMRNQMASYEKARSESYRPETEINRDFYKEQTS
Ga0181379_10269116	3300017783	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARAESYRPETQVKENLYKEFTA
Ga0211588_10003289	3300020260	Marine	VAVDRRRLRKGDSYVQTSRGPALAKQRAATYRYRKQAEPFRTEQSPGTGGFGSGLETQIQRNYMKQYDRERAESLRPENEIQESILDKIKSANYQD
Ga0211677_103263032	3300020385	Marine	VVDRRRLRAGDYYTPSQRGPALAKQRAAQYRFNQSRKPFRTEQTPGTGGFGSGLETQIMRNQMASYDKARAESYRPETEVKEKLYKEFTS
Ga0211532_1000074735	3300020403	Marine	VVDRRRLRKGDTYIPNLRGAAIAKQRAANYRFSKNVEPFRTERTPGTGGFGSGLQTQIMRNQMKAFDKARAESFRPETEINRELFESLTS
Ga0211557_1000060221	3300020418	Marine	VAVDRRRLRKGDSYTPNFRGPALAKQRAAAYRYRKQAEPFRTERAPGTGGFGSGLETQIMRNYQKQYDRERAESLRPETEIQASILNKIQTANQQN
Ga0211653_1001084710	3300020421	Marine	VVDRRRLRAGDSYTPEWRGAALAKQRAAQYRFNQSREPFRTEQTPGTGGFGSGLETQIMRNQEASYEKARAESYRPESIKYQDLKQYV
Ga0211576_100144573	3300020438	Marine	VVDRRRLRAGDSYTPEGRGPALAKQRAAQYRFNLSREPFRTEQAPGTGGFGSGLETQIMRNQQTAADNERAESYRPETFKYKN
Ga0211576_100755521	3300020438	Marine	VTVDRRYLRAGDSYTPDLRGPAIAKQRAAQFKFDAQREPFRTEQTPGTGGFGAGLETQIMRNQMASNEKARSESYRPETEINRDFYKEQTS
Ga0211576_105168952	3300020438	Marine	VVDRRRLRAGDSYTPEWRGAALAKQRAAQYRFDQKREPFRTEQTPGTGGFGSGLETQIMRNQNASYEKARAESYRPETLKYQDIKQLV
Ga0211558_102680331	3300020439	Marine	VAVDRRRLRKGDSYTPNFRGPALAKQRAAAYRYRKQAEPFRTERAPGTGGFGSGLETQIMRNYQKQYDRERAE
Ga0211518_100524207	3300020440	Marine	VAVDRRRLRKGDSYVQSSRGPALAKQRAAAYRYRKQAQPFRTEQNPGTGGFGSGLETQIMRNYQRQYDRERAESLRPETEIQASILDKIKSAN
Ga0211559_1000188524	3300020442	Marine	VAVDRRRLRKGDSYVQTSRGPALAKQRAATYRYRKQAEPFRTEQAPGTGGFGSGLETQIQRNYNKQYDRERAESLRPENEIQASILDKIKSANYQD
Ga0211545_100653411	3300020452	Marine	VVDKRRLRQGDSYTPNRRGPALAKQRAAQYRYNQSRKPFRTEQAPGTGGFKGGLGTQIMRNQMASYNKARSESFRPETEVKENLYKEFTS
Ga0211550_102572413	3300020453	Marine	VAVDRRRLRKGDSYTPNSRGPALAKQRAASYRYNKQYKPFRTEQSPGTGGFGSGLETQIMRNQTKQFDRERAESLRPETEIQQSILNKIKTSGYQD
Ga0211546_1000020043	3300020462	Marine	VAVDRRRLRKGDSYTPNSRGPALAKQRAASYRYNKQYKPFRTEQSPGTGGFGSGLETQIMRNQTKQFDKERAESLRPETEIQQSILNKIKTARYQD
Ga0211546_100915453	3300020462	Marine	VAVDRRRLRKGDSYTPTSRGPALAKQRAASYRYNKQYKPFRTEQSPGTGGFGSGLETQIMRNQTKQFDRERAESLRPETEIQQSILDRIKSANYQD
Ga0211577_101072861	3300020469	Marine	VTVDRRYLRAGDSYTPNLRGPAIAKQRAAQYKYNAQREPFRTEQTPGTGGFGAGLETQIMRNQMASNEKARSESYRPETEINRDFYKEQSS
Ga0213867_10042143	3300021335	Seawater	VVDRRRLRQGDSYTPNRRGPALAKQRAAQYRYNQSRKPFRTEQAPGTGGFTGGLGTQVMRNQMASYNKARSESFRPETEVKENLYKEFTS
Ga0213865_102106431	3300021373	Seawater	VAVDRRRLRKGDSYTPTSRGPALAKQRAASYRYNKQYKPYRTEQSPGTQGVPYDPTISGGGFGGFKGGLFTQQMRNQTKRFDRERAESLRPENEIQQSILDRMKSANYQD
Ga0208157_100076123	3300025086	Marine	VAVDRRRLRKGDSYVQTSRGPALAKQRAAAYRYNKQYKPYRTEQSPGTQGVPYDPTLRGGFGGFKGGLFTQQMRNQTTKFDRERAESLRPENEIQQSILKKIKTA
Ga0208669_10546232	3300025099	Marine	VVDRRRLRAGDSYTPEGRGPALAKQRAAQYRFNLSREPFRTEQAPGTGGFGSGLETQIMRNQQTAADNERSESYRPETFKYKEN
Ga0208159_100058213	3300025101	Marine	VAVDRRRLRKGDSYVQTSRGPALAKQRAAAYRYRKQSEPFRTEQSPGTGGFGSGLETQIQRNYIRQFDRERAESLRPENEIQQSILNKIKTA
Ga0209535_10099838	3300025120	Marine	VVDRRRLRAGDSYTPNRRGPALAKQRAAQYRYNQSRKPFRTEQEPGSGGFTGGLGTQIMRNQMASYNKKRSESYRPETEVKENLYKEFTS
Ga0209535_10880641	3300025120	Marine	VVDRRRLRAGDSYTPNRRGPALAKQRAAAFMYDQQRKPFRTEQNPGTQGVPYGGAAGGAFSGFKGGLGTQIMRNQMASYNKARSESYRPETEVKENLYKE
Ga0209535_11269393	3300025120	Marine	VVDRRRLRAGDSYTPNSRGPAIAKQRAAQFRFNQSREPFRTEQAPGTGGFGSGLETQIMRNQQASYDKARSESYRPETFKYKNVRQLA
Ga0209535_11855461	3300025120	Marine	VVDRRRLRAGDSYTPKWRGPALAKQRAAAYMYDKQRKPFRTEQNPGTQGVPYGGAAGGGFRGFKGGLETQIMRNQMASYDKSRAESYRPETEVKEELYKEFTS
Ga0209232_100165212	3300025132	Marine	VAVDRRRLRKGDSYVQTSRGPALAKQRAAAYRYRKQSEPFRTEQSPGTGGFGSGLETQIQRNYNRQFDRERAESLRPETEIQASILDKIKSANYQD
Ga0209337_10614954	3300025168	Marine	PALAKQRAAAYMYDKQRKPFRTEQNPGTQGVPYGGAAGGAFSGFKGGLGTQIMRNQMASYNKARSESYRPETEVKENLYKEFTS
Ga0209557_10327041	3300025483	Marine	VVDRRRLRQGDSYTPSSRGPAIAKQRAAAYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETQVKENLYKEFTA
Ga0208555_10574672	3300027213	Estuarine	VVDRRRLRQGDSYTPSGRGPALAKQRAAAYKFNQSRKPFRTEQTPGTQGVPYGGPAGGGFGDFKGGLFTQQMRNQMASYDKARAESYRPETEVKENLYK
Ga0257106_10695784	3300028194	Marine	VVDRRRLRAGDSYTPSQRGPAIAKQRAAQYRYNQSRKPFRTEQTPGTGGFGAGLETQIMRNQMASYEQARSESYRPETEVKENLYKEFTS
Ga0257106_12419081	3300028194	Marine	VVDRRRLRAGDSYTPNRRGPALAKQRAAAFMYDQQRKPFRTEQNPGTQGVPYGGAAGGAFSGFKGGLGTQIMRNQMASYNKARSESYRPETEVKENLYKEFTS
Ga0307488_102958072	3300031519	Sackhole Brine	VVDRRRLRQGDSYTPERRGPALAKQRAAQYRFNQSREPFRTEQAPGTGGFGSGLETQIMRNQQASYDKARSESFRPETFKYKNVRQLDGSSAGD
Ga0315320_102782151	3300031851	Seawater	VVDRRRLRAGDSYTPKSRGPAIAKQRAAQYRFNAQRQPSRTEQSPGTGGFGSGLETQIMRNQEASYDKARSE
Ga0315315_106781842	3300032073	Seawater	VVDRRRLRQGDSYTPSRRGPALAKQRAAQYRFNQSRKPFRTEQEPGTGGFGSGLETQIMRNQMASYDKARAESYRPETEVKENLYKEFTA
Ga0315321_106895503	3300032088	Seawater	VVDRRRLRAGDSYTPKSRGPAIAKQRAAQYRFNAQRQPFRTEQSPGTGGFGSGLETQIMRNQEASYDKARSESYRPET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097154

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences