Basic Information | |
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Family ID | F096901 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 52 residues |
Representative Sequence | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE |
Number of Associated Samples | 76 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 77.88 % |
% of genes near scaffold ends (potentially truncated) | 18.27 % |
% of genes from short scaffolds (< 2000 bps) | 59.62 % |
Associated GOLD sequencing projects | 60 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.70 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (63.462 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (36.538 % of family members) |
Environment Ontology (ENVO) | Unclassified (44.231 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (92.308 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 17.50% β-sheet: 25.00% Coil/Unstructured: 57.50% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.70 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Aqueous Seawater Freshwater To Marine Saline Gradient Marine Seawater Salt Marsh Enviromental Estuarine Water Pelagic Marine Seawater Pelagic Marine Seawater Pond Water Saline Water And Sediment Bioluminescent Bay |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
P_2C_Liq_3_UnCtyDRAFT_1011603 | 3300000369 | Enviromental | MWTLWIVSTVIGSTEPKLTRYSEYETAMSCYVEQAIQEVHFTQGETAFCEEG* |
BB_Man_B_Liq_inBBDRAFT_10100545 | 3300000401 | Bioluminescent Bay | MWTLWIVSSVIGSAEPKLTRYETFETAMSCHIKQTVLEAEFTQGEKAFCSDE* |
BB_Man_B_Liq_inBBDRAFT_10365403 | 3300000401 | Bioluminescent Bay | MWTLWIVSSVIGSAEPKLTRYETFETAMSCHIEQAVLEAEFSQGEKAFCSDE* |
P_2C_Liq_1_UnCtyDRAFT_10032104 | 3300000418 | Enviromental | MWTLWIVSSVIGSTEPKVTRYAEFETTMSCHIEQGIVEENFTQGEKAFCTDER* |
P_2C_Liq_1_UnCtyDRAFT_10070694 | 3300000418 | Enviromental | MWTLWIVSSVIGSAEPKYTRYAEYETAMSCHIEQAVVEVNFTQGETAFCEEG* |
P_2C_Liq_1_UnCtyDRAFT_10231353 | 3300000418 | Enviromental | MWTLWIVSSVIGSTEPKVTRYAEFETTMSCHIEKAVVEVNFTQGETAFCKESNE* |
JGI20157J14317_101529863 | 3300001352 | Pelagic Marine | MWTLWIISTIVNHVEPKYTRYAEFETAMSCQIEQAVVEVIFTQNEIAYCEKNND* |
JGI26080J50196_10516882 | 3300003345 | Marine | MWTLLIISTVIVIGLDEPKVTRYAEYDTAMSCHIEQAVVETTFTQNETAFCKEIK* |
JGI26081J50195_11127072 | 3300003346 | Marine | MWTLWIVSSVIGSTEPKYTRYEEFETSTSCHIEQAVLETEFIQHEKAFCINE* |
JGI26088J50261_10037163 | 3300003409 | Marine | MWTLWIVSTVIGLEEPKVTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE* |
JGI26088J50261_10681811 | 3300003409 | Marine | MWTLWIVSSVIGGTEPKVTRYKEFGTAMSCHIEQAVLEVNFTQGETAFCKGKESK* |
JGI26084J50262_10768171 | 3300003427 | Marine | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFSQGEKAFCTDD* |
JGI26083J51738_100918341 | 3300003621 | Marine | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFSQGEKAF |
JGI26083J51738_101194581 | 3300003621 | Marine | MWTLWIVSSVIGSTEPKYTRYEEFETSTSCHIEQAVLETEFIQHEKAFCINE |
Ga0074648_12298562 | 3300005512 | Saline Water And Sediment | MDRISMGVQLMWTLWIVSTIVDSAEPKYTRYAEFETAMSCHIEQAVVEVTFTQNEIAYCEKNND* |
Ga0075474_100006892 | 3300006025 | Aqueous | MWTLWIISSVIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE* |
Ga0070749_107251433 | 3300006802 | Aqueous | MWTVWIISTVIGLEEPKYTRYETFESAMSCHIEQAVLEAEFTQGEKAFCTDD* |
Ga0070747_10282744 | 3300007276 | Aqueous | MWTLWIVSTVIGSAEPKLTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE* |
Ga0070745_10078822 | 3300007344 | Aqueous | VIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE* |
Ga0099849_100022424 | 3300007539 | Aqueous | MWTLWIVSSVIDSTEPKYTRYETFETAMSCHIEQAVLETSFTEGEKAFCSDE* |
Ga0099849_10317884 | 3300007539 | Aqueous | MWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE* |
Ga0102945_10001656 | 3300007609 | Pond Water | MWTLWIVSTVIGSTEPKYTRYGEYETAMSCHIEQAIQEVQFTQGETAFCEED* |
Ga0102945_10122642 | 3300007609 | Pond Water | MWTLWIVSSIINSAEPKYTRYAEFETSMSCSIEKAFLEIEFKSNEVAFCSYE* |
Ga0115566_104888363 | 3300009071 | Pelagic Marine | MWTLWIVSTVIGSAEPKVTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE* |
Ga0115549_11814372 | 3300009074 | Pelagic Marine | MWTLWIVSTVIGLEEPKVTHYAEFETAMSCHSEQAVLETMFENNEVAYCDYE* |
Ga0115571_10051882 | 3300009495 | Pelagic Marine | MWTLWIVSSVIYSIEPKYTRYEEFETAMSCHIEQAVLETEFIQNEKAFCINE* |
Ga0115571_12963153 | 3300009495 | Pelagic Marine | MWTLWIVSSVIGSTEPKVTRYAEFETTMSCYIKQAIVEENFTQGETAFCEEG* |
Ga0115570_101420133 | 3300009496 | Pelagic Marine | MWTLWIVSSVIGSTEPKVTRYAEFETAMSCHIEQAIVEENFTQGETAFCKEG* |
Ga0115570_102114603 | 3300009496 | Pelagic Marine | MWTLWIVSTVIGSTEPKYTRYAEFETAMSCHIEQAMQEVHFTQGETAFCEEG* |
Ga0115572_100690625 | 3300009507 | Pelagic Marine | MWTLWIVSTVIGITEPKYTRYAEFETAMSCHIEQAVQEIYFTQGEVAFCDYE* |
Ga0129348_12662173 | 3300010296 | Freshwater To Marine Saline Gradient | MWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETSFTEGEKVVCTNE* |
Ga0182078_100617123 | 3300016747 | Salt Marsh | TMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE |
Ga0181390_10220803 | 3300017719 | Seawater | MIWTLWIVSSVIGSTEPKYTRYKEFETAMSCYTEQVVVEVNFTQGEEAFCTNE |
Ga0187219_10426434 | 3300017751 | Seawater | MRSMIWTLWIVSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE |
Ga0181565_100759903 | 3300017818 | Salt Marsh | MWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETSFTESEVAYCEGPDE |
Ga0181565_100793052 | 3300017818 | Salt Marsh | MWTLWIVSSVIGSAEPKLTRYETFETAMSCHIEQAVLEAEFTQGEKAFCSDE |
Ga0181565_103686822 | 3300017818 | Salt Marsh | MWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE |
Ga0181565_106066312 | 3300017818 | Salt Marsh | MWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLEATFENNEVAICTEQRNFK |
Ga0181565_107019721 | 3300017818 | Salt Marsh | MWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVVCTNE |
Ga0181584_100686393 | 3300017949 | Salt Marsh | MWTLWVISTIIDSTEPKYTRYAEYESAMSCHIQQAVLETNFTQGETAFCAEE |
Ga0181584_106527343 | 3300017949 | Salt Marsh | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCSDE |
Ga0181607_1000188017 | 3300017950 | Salt Marsh | MSMWTLWIVSSVIGSAEPKYTRYETFETQKECLLERAVLTSTFTQGERAFCEGTNE |
Ga0181577_105237591 | 3300017951 | Salt Marsh | MWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE |
Ga0181583_100783345 | 3300017952 | Salt Marsh | MWTLWVISTIIDSTEPKYTRYAEYESAMSCHIQQAVLETNFTEGETAFCAEE |
Ga0181582_102985041 | 3300017958 | Salt Marsh | MWTLWIISSVIGSTEPKYTRYETFETAMSCHIEQAVLEADFTQGEKAFCTDE |
Ga0181581_105995451 | 3300017962 | Salt Marsh | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCT |
Ga0181589_105621481 | 3300017964 | Salt Marsh | MWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEADFTNGEKAFCTDE |
Ga0181590_100608187 | 3300017967 | Salt Marsh | MWTLWIISSVIESAEPKYTRYETFETAMSCHIEQAVLETSFTESEVAYCEGPDK |
Ga0181590_102535942 | 3300017967 | Salt Marsh | MWALWIVSSVIGSAEPKYTLYETFETAMSCHIEQAVLETTFTEGEVAFCKGKED |
Ga0181590_108198521 | 3300017967 | Salt Marsh | VIGSAEPKYTRYETFETAMSCHIEQAVLEADFTQGEKAFCTDE |
Ga0181585_101289231 | 3300017969 | Salt Marsh | MWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE |
Ga0181576_103504053 | 3300017985 | Salt Marsh | LWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVVCTNE |
Ga0181600_104044184 | 3300018036 | Salt Marsh | MWTLWIVSSVIGSTEPKYTHYAEFETSMSCHIEQAVLETMFENNEVAFCEEVLDMK |
Ga0181601_103835362 | 3300018041 | Salt Marsh | MWTLWIVSSVIGSAEPKYTRYEEFETAMSCHIEQAVLEANFTQSETAFCEEGLDMK |
Ga0181606_103900444 | 3300018048 | Salt Marsh | MWTLWIVSSVIGSTEPKYTRYEEFETAMSCHIEQAVLEANFTHSETAFCEEGLDMK |
Ga0181572_103404213 | 3300018049 | Salt Marsh | MWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEADFTQGEKAFCTDE |
Ga0181592_106267142 | 3300018421 | Salt Marsh | RLMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE |
Ga0181591_100299455 | 3300018424 | Salt Marsh | MSMWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE |
Ga0181591_106818882 | 3300018424 | Salt Marsh | MWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDD |
Ga0182097_10734633 | 3300019261 | Salt Marsh | WTLWTVSSVIGSAEPKYTRYEEFETAMSCHIEQAVLEANFTQSETAFCEEGLDMK |
Ga0182067_10258223 | 3300019276 | Salt Marsh | MWTLWIISSVIDSVEPKLTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE |
Ga0181562_103880081 | 3300019459 | Salt Marsh | MWTLWIISSIIGSAEPKLTRYETFETDMSCHIEQAVLEAEFTQGEKAFCN |
Ga0194024_10021614 | 3300019765 | Freshwater | MWTLWIVSSVIDSTEPKYTRYETFETAMSCHIEQAVLETSFTEGEKAFCSDE |
Ga0181575_100426162 | 3300020055 | Salt Marsh | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEKAFCTDE |
Ga0206131_1000259522 | 3300020185 | Seawater | MWTLWIVSSVIYSIEPKYTRYEEFETAMSCHIEQAVLETEFIQNEKAFCINE |
Ga0206131_102721322 | 3300020185 | Seawater | MWTLWIVSTVIGITEPKYTRYAEFETAMSCHIEQAVQEIYFTQGEVAFCDYE |
Ga0213867_10003576 | 3300021335 | Seawater | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVICTDE |
Ga0213859_100227244 | 3300021364 | Seawater | MWTLWIVSSVIGSVEPKYTQYETFETAMSCHIEQAVLEISFTESEVAYCEGPDE |
Ga0213859_100243144 | 3300021364 | Seawater | MWTLWIISSVIDSAEPKLTRYETFETAMSCHIEQAVLEADFTHGEKAFCTDE |
Ga0213859_100434922 | 3300021364 | Seawater | MWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFIEGETALCAEE |
Ga0213859_101944194 | 3300021364 | Seawater | MWTLWIISSIIDSAEPKYTRYAEYESAMSCHIQQAVLETNFTEGET |
Ga0213859_104807932 | 3300021364 | Seawater | MWTLWIVSSVIGSVEPKYTQYETFETAMSCHIEQAVLEADFTQGEKAFCTDE |
Ga0213860_100256664 | 3300021368 | Seawater | TRLMWTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE |
Ga0213860_101202412 | 3300021368 | Seawater | MCVDQGESVMWTLWIISSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFTQGEEAFCTD |
Ga0213865_100461382 | 3300021373 | Seawater | MWALWIVSSVIGSAEPKYTLYETFETAMSCHIEQAVLETSFTEGEKVVCTNE |
Ga0213869_101738254 | 3300021375 | Seawater | MWTLWIVSTVIGSAEPKYTRYEEFETAMSCHIEQAVLEANFTQSETAFCEEVLDMK |
Ga0222715_103066073 | 3300021960 | Estuarine Water | MWTLWIISSVIDSAEPKYTRYAEFETAMSCHIEQAVVEVNFTQGETAFCKELNE |
Ga0196899_100187812 | 3300022187 | Aqueous | MWTLWIISSVIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE |
Ga0196899_10493211 | 3300022187 | Aqueous | MCLDQGESVMWTVWIISTVIGLEEPKYTRYETFESAMSCHIEQAVLEAEFTQGEKAFCTD |
Ga0255765_100002862 | 3300022921 | Salt Marsh | MWTLWIVSSVIGSAEPKYTRYETFETQKECLLERAVLTSTFTQGERAFCEGTNE |
Ga0255780_103223342 | 3300022935 | Salt Marsh | WTLWIISSVIDSVEPKYTRYETFETATSCHIEQAVLEADFTHGEKAFCTDE |
Ga0255764_102312331 | 3300023081 | Salt Marsh | LWIISSVIDSVEPKLTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE |
Ga0255778_103092921 | 3300023084 | Salt Marsh | WTLWIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE |
Ga0255762_1000163732 | 3300023119 | Salt Marsh | MWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETSFTESEVAYCEGPDK |
Ga0255762_103532622 | 3300023119 | Salt Marsh | RKREWVMWTLWIISSVIDSAEPKYTRYETFETAMSCHIEQAVLETTFTEGEKVVCTNE |
Ga0255772_100791964 | 3300023176 | Salt Marsh | MWTLWIISSVIDSVEPKLTRYETFETAMSCHIEQAVLEASFTEGEKV |
Ga0255768_100697955 | 3300023180 | Salt Marsh | WIISSVIDSVEPKYTRYETFETAMSCHIEQAVLEASFTEGEKVVCTNE |
Ga0228623_10078022 | 3300024267 | Seawater | MWILWIVSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE |
Ga0209654_10155933 | 3300025608 | Marine | MWTLWIVSSVIGGTEPKVTRYKEFGTAMSCHIEQAVLEVNFTQGETAFCKGKESK |
Ga0209716_100077216 | 3300025626 | Pelagic Marine | MWTLWIVSTVIGSAEPKVTHYAEFETAMSCHIEQAVLETMFENNEVAYCDYE |
Ga0209716_11261382 | 3300025626 | Pelagic Marine | MWTLWIVSTVIGSAEPKYTRYAEFETAMSCHIEQAMQEVHFTQGETAFCEEG |
Ga0209136_10461973 | 3300025636 | Marine | MWTLWIVSTVIGSAEPKLTRYAEFETAMSCHIEQAMQEVHFTQGETAFCEEG |
Ga0208898_11166362 | 3300025671 | Aqueous | MWTVWIISTVIGLEEPKYTRYETFESAMSCHIEQAVLEAEFTQGEKAFCTDD |
Ga0209653_10081633 | 3300025695 | Marine | MWTLWIVSSVIGSAEPKYTRYETFETAMSCHIEQAVLEAEFSQGEKAFCTDD |
Ga0209532_12042141 | 3300025696 | Pelagic Marine | MWTLWIVSTVIGSAEPKVTHYAEFETAMSCHIEQVVLETMFENNEVAYCDYE |
Ga0209771_10382083 | 3300025701 | Marine | MWTLWIVSSIIDSTEPKYTRYAEFETAMSCHIEQAVQEIYFTQDEVAFCDYE |
Ga0209602_11636632 | 3300025704 | Pelagic Marine | MWTLWIVSSVIGSTEPKVTRYAEFETAMSCHIEQAIVEENFTQGETAFCKEG |
Ga0209534_1000989212 | 3300025880 | Pelagic Marine | MWTLWIISTIVNHVEPKYTRYAEFETAMSCQIEQAVVEVIFTQNEIAYCEKNND |
Ga0209534_103563192 | 3300025880 | Pelagic Marine | MWTLWIVSTVIGSTEPKYTRYGEYETAMSCHIEQAFQEVHFTQGETAFCEEG |
Ga0209953_10005646 | 3300026097 | Pond Water | MWTLWIVSTVIGSTEPKYTRYGEYETAMSCHIEQAIQEVQFTQGETAFCEED |
Ga0209953_10233542 | 3300026097 | Pond Water | MWTLWIVSSIINSAEPKYTRYAEFETSMSCSIEKAFLEIEFKSNEVAFCSYE |
Ga0228620_10397012 | 3300026483 | Seawater | MWTLWIVSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE |
Ga0315320_106859882 | 3300031851 | Seawater | VSSVIGSTEPKVTRYAEYETAMSCHIEQAVVEVKFTQGEEAFCTNE |
Ga0348335_000018_38217_38354 | 3300034374 | Aqueous | VIDSAEPKLTQYETFETAMSCHIEQAVLEADFTQEEIAFCEDPNE |
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