Metagenome / Metatranscriptome Family F096677

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096677
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	41 residues
Representative Sequence	MKVVSDVLLLSYLDKFGLRVTVEAGQALACLYSEARLYKGP
Number of Associated Samples	72
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.64 %
% of genes near scaffold ends (potentially truncated)	90.38 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.038 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (61.538 % of family members)
Environment Ontology (ENVO)	Unclassified (87.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (51.923 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1B570J13877_1000552 2B570J29597_1034822 3B570J29630_10118772 4B570J29642_10046501 5Ga0005851_11321481 6Ga0068879_11129591 7Ga0068877_101910782 8Ga0068877_105330931 9Ga0068877_107122381 10Ga0068876_107477802 11Ga0068876_107763572 12Ga0068872_102892401 13Ga0068872_107051381 14Ga0102690_17631541 15Ga0114338_11918813 16Ga0114338_12322772 17Ga0114338_13014291 18Ga0114342_10158581 19Ga0114345_11892311 20Ga0114345_12648031 21Ga0114348_11084603 22Ga0114352_11073772 23Ga0114349_11950811 24Ga0103702_1022081 25Ga0105103_104842492 26Ga0105102_103544871 27Ga0157605_11809281 28Ga0157609_10621032 29Ga0157600_12580411 30Ga0157630_12166661 31Ga0157615_12703351 32Ga0164293_106680702 33Ga0164293_109837732 34Ga0164292_105776552 35Ga0180042_1690211 36Ga0180056_10040551 37Ga0180059_11565112 38Ga0208464_1162042 39Ga0208230_10228631 40Ga0208084_10329921 41Ga0208087_10412711 42Ga0208484_10354971 43Ga0208484_10376171 44Ga0208202_10256701 45Ga0208854_10327712 46Ga0208226_10459641 47Ga0208232_10430972 48Ga0208232_10486731 49Ga0208364_10473651 50Ga0208718_10956801 51Ga0316616_1032704752 52Ga0334978_0396716_1_105 53Ga0334978_0470239_3_122 54Ga0334981_0234677_729_836 55Ga0334981_0383312_3_119 56Ga0334982_0483687_2_106 57Ga0334992_0469477_3_113 58Ga0334994_0494180_2_139 59Ga0334994_0542985_405_530 60Ga0335003_0394447_1_138 61Ga0335003_0403710_446_583 62Ga0335003_0413663_446_574 63Ga0334979_0511567_2_115 64Ga0334979_0656245_3_128 65Ga0334979_0729440_407_514 66Ga0335002_0213610_2_121 67Ga0335002_0514059_1_126 68Ga0335002_0585358_398_580 69Ga0335005_0662335_407_556 70Ga0335021_0478515_519_635 71Ga0335024_0562722_3_119 72Ga0334987_0620309_314_433 73Ga0335000_0709812_439_549 74Ga0335001_0166387_1121_1240 75Ga0335019_0105813_1728_1880 76Ga0335019_0826668_1_132 77Ga0335020_0093281_1427_1540 78Ga0335020_0385762_3_134 79Ga0335020_0527546_2_136 80Ga0335020_0565388_2_124 81Ga0335020_0602359_389_511 82Ga0335022_0594189_417_560 83Ga0335022_0641622_3_122 84Ga0335030_0824252_3_116 85Ga0335036_0891918_3_146 86Ga0335037_0531450_516_626 87Ga0335051_0544489_2_106 88Ga0335051_0565498_387_521 89Ga0335033_0278657_1_123 90Ga0335033_0500504_1_135 91Ga0335033_0572520_1_114 92Ga0335054_0566325_1_150 93Ga0335056_0492129_539_646 94Ga0335056_0650441_1_126 95Ga0335058_0664599_3_146 96Ga0335061_0603874_2_133 97Ga0335049_0862077_1_114 98Ga0335052_0508452_3_110 99Ga0334997_0572225_581_697 100Ga0334997_0605265_1_111 101Ga0334997_0966563_393_503 102Ga0335013_0632785_2_115 103Ga0335048_0419015_3_119 104Ga0335048_0541415_1_117
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1B570J13877_1000552 2B570J29597_1034822 3Ga0068877_101910782 4Ga0068877_105330931 5Ga0068872_102892401 6Ga0068872_107051381 7Ga0114345_12648031 8Ga0114348_11084603 9Ga0114349_11950811 10Ga0103702_1022081 11Ga0157605_11809281 12Ga0164293_106680702 13Ga0164292_105776552 14Ga0334979_0729440_407_514 15Ga0335002_0585358_398_580 16Ga0335005_0662335_407_556 17Ga0335024_0562722_3_119 18Ga0335019_0105813_1728_1880 19Ga0335056_0650441_1_126 20Ga0335061_0603874_2_133 21Ga0335048_0541415_1_117
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40. 1Ga0105102_103544871 2Ga0068877_101910782 3Ga0068876_107477802 4Ga0068876_107763572 5Ga0114342_10158581 6Ga0114345_12648031 7Ga0114349_11950811 8Ga0103702_1022081 9Ga0157630_12166661 10Ga0164293_106680702 11Ga0180042_1690211 12Ga0208484_10376171 13Ga0208232_10430972 14Ga0208364_10473651 15Ga0335003_0394447_1_138 16Ga0335003_0413663_446_574 17Ga0334979_0511567_2_115 18Ga0334979_0729440_407_514 19Ga0335024_0562722_3_119 20Ga0334987_0620309_314_433 21Ga0335019_0105813_1728_1880 22Ga0335051_0544489_2_106 23Ga0335051_0565498_387_521 24Ga0334997_0605265_1_111 25Ga0335013_0632785_2_115 26Ga0335048_0541415_1_117
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.62% β-sheet: 0.00% Coil/Unstructured: 46.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00665	rve	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.96
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.96
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.96
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.96 %
Unclassified	root	N/A	99.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
Viruses	superkingdom	All Organisms → Viruses	0.96 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %
Unclassified	root	N/A	99.04 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001268\|B570J13877_100055	All Organisms → Viruses → Predicted Viral	4175	Open in IMG/M
3300002357\|B570J29597_103482	Not Available	523	Open in IMG/M
3300002360\|B570J29630_1011877	Not Available	570	Open in IMG/M
3300002366\|B570J29642_1004650	Not Available	915	Open in IMG/M
3300003684\|Ga0005851_1132148	Not Available	570	Open in IMG/M
3300005420\|Ga0068879_1112959	Not Available	577	Open in IMG/M
3300005525\|Ga0068877_10533093	Not Available	645	Open in IMG/M
3300005525\|Ga0068877_10712238	Not Available	536	Open in IMG/M
3300005527\|Ga0068876_10747780	Not Available	519	Open in IMG/M
3300005527\|Ga0068876_10776357	Not Available	507	Open in IMG/M

Showing 1 to 10 of 94 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.04%
Terrestrial	Environmental → Terrestrial	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.04%
Soil	Environmental → Terrestrial → Soil	0.96%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	71.15%
Lentic	Environmental → Aquatic → Freshwater → Lentic	25.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.54%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	71.15%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	61.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	10.58%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	5.77%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	8.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.92%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	8.65%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001268	Freshwater microbial communities from Lake Mendota, WI - 12SEP2008 deep hole epilimnion	Environmental	Open in IMG/M
3300002357	Freshwater microbial communities from Lake Mendota, WI - 17AUG2010 deep hole epilimnion	Environmental	Open in IMG/M
3300002360	Freshwater microbial communities from Lake Mendota, WI - 02JUN2010 deep hole epilimnion	Environmental	Open in IMG/M
3300002366	Freshwater microbial communities from Lake Mendota, WI - 18MAY2010 deep hole epilimnion ns	Environmental	Open in IMG/M
3300003684	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA - 2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005420	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300007534	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M

Showing 1 to 10 of 72 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J13877_1000552	3300001268	Freshwater	MKVASDVLLLLCLHDFGLWVSVELGQASAFLYSEARLYKGPRQSAPS
B570J29597_1034822	3300002357	Freshwater	MKVVSDVLLLSYLDKFGLRVTVEAGQALACLYSEARLYKGPGPA
B570J29630_10118772	3300002360	Freshwater	MKVASDVLLLLCLHDFGLWVSVELGQATAFLYSEARLYKGPRQSP
B570J29642_10046501	3300002366	Freshwater	MKIVSDVLLLSYLDKFGLRVTVEAGQALAVLYSEARLYKGP
Ga0005851_11321481	3300003684	Freshwater And Sediment	MKVVSDVLLLLCLHDFGLRVTAEAGQALACLYSGARLYKGPGQSTL
Ga0068879_11129591	3300005420	Freshwater Lake	MKVVSDVLLLLCLHDFGLRVTVEDGQASACLYSEARLYKGP
Ga0068877_101910782	3300005525	Freshwater Lake	MKMDNDVLLLSYLDKICLTLTGNLWRALASLYCEGEAI*
Ga0068877_105330931	3300005525	Freshwater Lake	MVSDVLLLSYLDKIGLSLTGEAGQASAYLYSEARLYKGASL
Ga0068877_107122381	3300005525	Freshwater Lake	MVSDVLLLSYLDKIGLSLTGEAGQASAYLYSEARLYK
Ga0068876_107477802	3300005527	Freshwater Lake	MVSDVLLLSYIDKIGLSLTGEAGQASAYLYSEARLYKGARL
Ga0068876_107763572	3300005527	Freshwater Lake	MDSDVLLLSYLNKICLILTGEPGRALAYLYSEARLYKGARA
Ga0068872_102892401	3300005528	Freshwater Lake	LLLLCLHDFGLRVSVELGQASAFLYSEARLVVYI*
Ga0068872_107051381	3300005528	Freshwater Lake	VLLLSYLDKFGLSVTVEAGQALAVLYSKARLYKGP
Ga0102690_17631541	3300007534	Freshwater Lake	MKVVSDVLLLLCLHKFDLRVTAEAGQALACLYSGARLYKGPGQANL
Ga0114338_11918813	3300008105	Freshwater, Plankton	MKVVSDVLLLLCLHDFDPRVTVKAGQALACLYSEARLYKGPGQ
Ga0114338_12322772	3300008105	Freshwater, Plankton	MKVVSDVLLLLCLHDFGLWVSVELGQASAFLYSEARLYKGP
Ga0114338_13014291	3300008105	Freshwater, Plankton	MKVASDVLLLLCLHDFGLWVSVELGQASAFLYSEARL
Ga0114342_10158581	3300008109	Freshwater, Plankton	MKMDNDVLLLCYLDKIRLTLTGDLWRALASLYSEGEAI*
Ga0114345_11892311	3300008112	Freshwater, Plankton	MDSDVLLLSYLDKVCLILTGEPGRALAYLYSEARLYKGA
Ga0114345_12648031	3300008112	Freshwater, Plankton	MDSDVLLLSYLDKICLTLTGDFW*ALASLYSESEADLFIILPS
Ga0114348_11084603	3300008115	Freshwater, Plankton	MDSDVLLLSYFDKICLILTGELWRALVCLYSEARLYNGAREAPLSQST
Ga0114352_11073772	3300008118	Freshwater, Plankton	MKVASDVLLLLCLHDFGLRVSVELGQASAFLYSEARLYKGP
Ga0114349_11950811	3300008263	Freshwater, Plankton	HRIGPKLNMKMDNGVLLLCYLDKICLTLTGNFWRALASLYSEARL*
Ga0103702_1022081	3300008924	Lake Water	MKVVSDVLLLSYLDKIGQSPMVEAGQAPARPYSEARPHKGPRQSP
Ga0105103_104842492	3300009085	Freshwater Sediment	MKVVSDVLLLSYLDKFGLRVTVEAGQALACLYSEAR
Ga0105102_103544871	3300009165	Freshwater Sediment	MKVVSDVLLLSYLDKFGLRVTVEAGQALACLYSEARLYKGP
Ga0157605_11809281	3300012716	Freshwater	MKVVSDVLLLLCLHKFDLRVTAEAGQASACLYSGARL
Ga0157609_10621032	3300012717	Freshwater	MKVASDVLLLLCLHDFGLRVIVEVGQASAFLYSEARLYKGPSQS
Ga0157600_12580411	3300012719	Freshwater	MKIVSDVLLLSYLDKFGLRVTVEAGQALACLYSEAR
Ga0157630_12166661	3300012722	Freshwater	MKMDSDVLLLSYLDKIYLILTGELWRALVCLYSEARLYKGAREA
Ga0157615_12703351	3300012734	Freshwater	MKVVSDVLLLSYLHKFGLRVTVEAGQALACLYSEARLYKGPGPANPSQST
Ga0164293_106680702	3300013004	Freshwater	MDSGVLLLSYLDKIWLIFTGEPGRALAYLYSEARLYKGAREASLS
Ga0164293_109837732	3300013004	Freshwater	MKVASDVLLLLCLHDFGLRVSVELGQASAFLYSEARLY
Ga0164292_105776552	3300013005	Freshwater	MKVDSDVLLFSYLDKICLALTGELRRALACLYSEARL
Ga0180042_1690211	3300016683	Freshwater	MKVVSDVLLLLCLQKFDLRVTAEAGQALACLYSGARLYK
Ga0180056_10040551	3300016686	Freshwater	MKVASDVLLLLCLHDFGLRVTVEVGQASACLYSEAR
Ga0180059_11565112	3300016695	Freshwater	MVSDVLLLSYLDKIRLILTGEAGQALAYLYSEARLY
Ga0208464_1162042	3300020482	Freshwater	MKVVSDVLLLLCLHKFDLRVTAEAGQASACLYSGARLYKGP
Ga0208230_10228631	3300020496	Freshwater	MKVVSDVLLLSYLDKFGLRVTVEAGQALACLYSEARLYKGPG
Ga0208084_10329921	3300020499	Freshwater	MKVVSDVLLLLCLHKFDLRVTAEAGQALACLYSGARLYKGPGQA
Ga0208087_10412711	3300020502	Freshwater	VLLLSYLDKIGLSLTVEAGQALAVLYSKARLYKGP
Ga0208484_10354971	3300020504	Freshwater	MKVVSDVLLLLCLHDFGLRVTVEDGQASACLYSEARLYKGPSQSTLP
Ga0208484_10376171	3300020504	Freshwater	MKVVSDVLLLSYFHKFDLRVTVEAGQALACLYSGARL
Ga0208202_10256701	3300020514	Freshwater	MKVVSDVLLLSYLHKFGLRVTVEAGQALACLYSEARLYKGPGPANPPQ
Ga0208854_10327712	3300020517	Freshwater	MKVVSDVLLLSYLHKFGLRVTVEAGQALACLYSEARLYKGPGPA
Ga0208226_10459641	3300020523	Freshwater	VLLLSYLDKIGLSLTVEAGQALAVLYSKARLYKGPRLAG
Ga0208232_10430972	3300020527	Freshwater	MKVASDVLLLLCLHDFGLRVTVEVGQASAFLYSEARLYKGP
Ga0208232_10486731	3300020527	Freshwater	MKVVSDVLLLSYLDKFGLRVTVEAGQALACLYSEARLYKGPGPANPP
Ga0208364_10473651	3300020533	Freshwater	MKVVSDVLLLLCLHEFDLRVTVKAGQALACLYNGARLYKGPGQSN
Ga0208718_10956801	3300020565	Freshwater	MKVASDVLLLLCLHDFGLRVSVELGQASAFLYSEARLYK
Ga0316616_1032704752	3300033521	Soil	MKVVSDVLLLLCLHKFDLRVTAEARQALACLYSGAR
Ga0334978_0396716_1_105	3300033979	Freshwater	MKVASDVLLLSYLDKFGLRVTVEAGQALACLYSEA
Ga0334978_0470239_3_122	3300033979	Freshwater	MKIVSDVLHLSYLDKFGLRVTVEAGQALAVLYSEARLYKG
Ga0334981_0234677_729_836	3300033980	Freshwater	MVSDVLLLSYLDKIRLILTGEAGQALACLYSEARLY
Ga0334981_0383312_3_119	3300033980	Freshwater	MVSDVLLLSYFDKIGLSLTGEAGQASAYLYSEARLYKGA
Ga0334982_0483687_2_106	3300033981	Freshwater	MKVVSDVLLLLCLHKFDLRVTVEAGQALACLYSGA
Ga0334992_0469477_3_113	3300033992	Freshwater	MKVASDVLLLLCLHDFGLRVTVEVGQASAFLYSEARL
Ga0334994_0494180_2_139	3300033993	Freshwater	MKVASDVLLLLCLHDFGLRVTVDLGQASAFLYSEERLYKGPSQSTL
Ga0334994_0542985_405_530	3300033993	Freshwater	MKVVSDVLLLSYLHKFGLRVTVEAGQALACLYSEARLYKGPG
Ga0335003_0394447_1_138	3300033995	Freshwater	MKVASDVLLLLCLHDFGLRVTAEAGQALACLYSGARLYKGPGQSTL
Ga0335003_0403710_446_583	3300033995	Freshwater	MLLLSYFDKIWLILTGEPGRALAYLYSEARLYKGAREASLSQSTTP
Ga0335003_0413663_446_574	3300033995	Freshwater	MVSDVLLLSYLDKIRLILTGEAGQALACLYSEARLYNGARTAS
Ga0334979_0511567_2_115	3300033996	Freshwater	KMDNDVLLLCYLDQIRLTLTCNLWRALACLDSEGEAI
Ga0334979_0656245_3_128	3300033996	Freshwater	MKVVSDVLLLSYLHKFDLRVTVEAGQALACLYSEARLYKGPG
Ga0334979_0729440_407_514	3300033996	Freshwater	MVGDVLLLSYLDKIWLILTGEPGRALACLYSEARLY
Ga0335002_0213610_2_121	3300034020	Freshwater	MKMDSDVLLLSYFDKICLILTGELWRALACLYSEARLYKG
Ga0335002_0514059_1_126	3300034020	Freshwater	MKVASDVLLLLCLHDFGLWVSVELGQASAFLYSEARLYKGPS
Ga0335002_0585358_398_580	3300034020	Freshwater	MKVVSDVLLLSYLHKFGLRVTVEAGQALACLYSEARLYKGPGPANPPQSTATRSTGNISV
Ga0335005_0662335_407_556	3300034022	Freshwater	MKVVSDVLLLLCLHDFGLRVTAEAGQALACLYSGARLYKGPGQSTLPQLA
Ga0335021_0478515_519_635	3300034023	Freshwater	MKVVSDVLLLLCLHGFGLRVTAEAGQALACLYSGARLYK
Ga0335024_0562722_3_119	3300034051	Freshwater	MLLLSYLDKICLALTGELQHALACLYSEARLYKGAREAS
Ga0334987_0620309_314_433	3300034061	Freshwater	MKVDSDVLLLLSYLDKICLALTGELGRALACLYSEGEAI
Ga0335000_0709812_439_549	3300034063	Freshwater	MDSDVLLLSYLDKICLILTGEPGRALAYLYSEARLYK
Ga0335001_0166387_1121_1240	3300034064	Freshwater	MLLLSYFDKICLILTGEPGRALAYLYSEARLYKGARAASL
Ga0335019_0105813_1728_1880	3300034066	Freshwater	MVSAQFNMKVDSDVLLLSYLDKICLTLTGDLRRALACLYSEARLYKGPREA
Ga0335019_0826668_1_132	3300034066	Freshwater	MKVASDVLLLLCLHDFGLWVSVELGQAKAFLYSEARLYKGPRQS
Ga0335020_0093281_1427_1540	3300034082	Freshwater	MVSDVLLLSYLDKIGLSLTGEAGQASAYLYSEARLYKG
Ga0335020_0385762_3_134	3300034082	Freshwater	MDSDVLLLSYLDKICLILTGEPGRALVCLYSEARLYKGARVASL
Ga0335020_0527546_2_136	3300034082	Freshwater	MVSDVLLLSYLDKIGLTLTGEAGQASACLYSEARLYKGARMAPLS
Ga0335020_0565388_2_124	3300034082	Freshwater	MVSDVLLLSYLDKIGLSLTGEAGQASAYLYSEARLYKGARL
Ga0335020_0602359_389_511	3300034082	Freshwater	MKVASDVLLLLCLHDFGLRVIVEVGQASAFLYSEARLYKGP
Ga0335022_0594189_417_560	3300034095	Freshwater	MKVVSDVLLLSYLHKFDLRVTVEAGQALACLYSEARLYKGPGPANLSQ
Ga0335022_0641622_3_122	3300034095	Freshwater	MKVVSDVLHLSYLDKFGLRVTVKAGQALACLYSEARPYKG
Ga0335030_0824252_3_116	3300034103	Freshwater	MKVASDVLLLLCLHDFGLRVTVEVGQASACLYSEARLY
Ga0335036_0891918_3_146	3300034106	Freshwater	MKVVSDVLLLSYLHKFDLRVTVEAGQALACLYSEARLYKGPGPPNLPQ
Ga0335037_0531450_516_626	3300034107	Freshwater	MKVVSDVLLLLCLHKFDLRVTVEAGQALACLYSGARL
Ga0335051_0544489_2_106	3300034109	Freshwater	MLLLSYFDKIGLSLTVEAGQALAVLYSEARLYKGP
Ga0335051_0565498_387_521	3300034109	Freshwater	MKVASDVLPLLCLHDFGLRVSVELGQASAFLYSEVRLYKGARQST
Ga0335033_0278657_1_123	3300034117	Freshwater	MKMDSDVLHFSYFDKIYLILTGELWRALACLYSEARLYKGA
Ga0335033_0500504_1_135	3300034117	Freshwater	MKVDSDVLLLSYLDKICLILTGDLRRALACLYCEARLYKGPREAT
Ga0335033_0572520_1_114	3300034117	Freshwater	MKVASDVLLLLCLHDFGLRVTVEVGQASAFLYSEARLY
Ga0335054_0566325_1_150	3300034119	Freshwater	MKVVSDVLLLSYLHKFGLRVTVEAGQALACLYSEARLYKGPGPANPPQST
Ga0335056_0492129_539_646	3300034120	Freshwater	MKMDNDVLLLCYLDKIRLTLTGDLWRALASLYSEGE
Ga0335056_0650441_1_126	3300034120	Freshwater	AQFKLKMVSDVLLLSYLDKIGLSLTDEVGQASAYLYSEARL
Ga0335058_0664599_3_146	3300034121	Freshwater	MKVASDVLLLLCLHDFGLRVTVEVGQASACLYSEARLYKGPSQSTPLS
Ga0335061_0603874_2_133	3300034168	Freshwater	MVSDVLLLSYFDKIGLSLTGEAGQASAYLYSEARLYIIREPDWR
Ga0335049_0862077_1_114	3300034272	Freshwater	MKVDSDVLLLSYLDKICLTLTGDLWRALACLYSEARL
Ga0335052_0508452_3_110	3300034279	Freshwater	MKVVSDVLLLSYLHKFGLRVTVEAGQALACLYSEAR
Ga0334997_0572225_581_697	3300034280	Freshwater	MDSDVLLLSYLDKIWLILTGEPGGALAYLYSEARLYKGA
Ga0334997_0605265_1_111	3300034280	Freshwater	MLHLSYFDKFGLRVTVKAGQALAVLYSEARLYKGPSS
Ga0334997_0966563_393_503	3300034280	Freshwater	MVSDVLLLSYLDKIGLSLTDEAGQASAYLYSEARLYR
Ga0335013_0632785_2_115	3300034284	Freshwater	MKVVSDVLLLLCLHKFDLWVTVEAGQASACLYSEARLY
Ga0335048_0419015_3_119	3300034356	Freshwater	MKVDSDVLLLSYLDKICLTLTGDLWRALACLYSEARLYK
Ga0335048_0541415_1_117	3300034356	Freshwater	MLLLSYLDKIGLSLTAEAGQTLAFLYSEARLYKGPRLAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters