Metatranscriptome Family F096613

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Overview

Basic Information
Family ID	F096613
Family Type	Metatranscriptome
Number of Sequences	104
Average Sequence Length	85 residues
Representative Sequence	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREQANANKA
Number of Associated Samples	67
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (83.654 % of family members)
Environment Ontology (ENVO)	Unclassified (94.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.500 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116. 1Ga0099809_100764671 2Ga0099809_110656491 3Ga0099817_14644971 4Ga0099807_15538452 5Ga0103951_104408601 6Ga0103951_105662872 7Ga0103502_102835111 8Ga0103878_10278001 9Ga0186218_10118171 10Ga0186218_10167601 11Ga0193376_10257611 12Ga0193269_10508881 13Ga0193263_10511381 14Ga0192952_10341832 15Ga0193086_10548051 16Ga0193086_10639381 17Ga0193403_10669801 18Ga0193267_10646641 19Ga0192866_10579932 20Ga0192866_10626231 21Ga0193418_10561181 22Ga0193418_10634321 23Ga0193495_10565181 24Ga0192974_10749721 25Ga0193387_10676681 26Ga0193425_10686051 27Ga0193416_10764642 28Ga0192839_10599221 29Ga0192839_10758101 30Ga0193388_10777131 31Ga0193329_11070141 32Ga0192872_10695001 33Ga0192872_10750221 34Ga0192877_11198462 35Ga0193042_11302751 36Ga0193042_11403251 37Ga0193500_10934431 38Ga0193005_10368051 39Ga0193359_11068261 40Ga0192859_10578021 41Ga0192859_10640262 42Ga0193162_10799342 43Ga0193162_10878182 44Ga0193162_10973452 45Ga0193360_10935831 46Ga0193268_12139311 47Ga0193262_100743351 48Ga0192921_101561582 49Ga0193265_101387682 50Ga0193531_103398671 51Ga0193087_101050381 52Ga0193087_101659511 53Ga0193087_102479951 54Ga0193417_101941871 55Ga0193326_100538911 56Ga0193326_100777791 57Ga0192873_103509131 58Ga0192873_103633271 59Ga0193540_101643441 60Ga0193430_101429561 61Ga0193430_101780211 62Ga0193430_101861921 63Ga0192916_101369802 64Ga0192953_101902813 65Ga0193078_102065051 66Ga0193078_102066191 67Ga0193078_102163621 68Ga0193361_102739051 69Ga0193044_101796031 70Ga0193043_102626621 71Ga0193525_104599132 72Ga0193569_103462301 73Ga0193569_103688102 74Ga0193561_101814982 75Ga0193561_103027331 76Ga0193535_102502502 77Ga0193535_102824391 78Ga0193449_101869451 79Ga0193558_101424302 80Ga0192857_100991041 81Ga0192857_101943361 82Ga0192857_102199852 83Ga0192857_102238321 84Ga0192857_102711441 85Ga0192857_102715751 86Ga0192857_103264222 87Ga0192857_103618411 88Ga0193356_103616062 89Ga0193040_10210871 90Ga0193541_10856101 91Ga0192856_10357912 92Ga0192856_10686511 93Ga0192856_10728491 94Ga0193453_11117062 95Ga0063136_10701731 96Ga0138346_106912691 97Ga0138346_109002282 98Ga0138346_109233132 99Ga0138345_103005431 100Ga0138345_103898093 101Ga0138345_106156741 102Ga0138345_109420791 103Ga0307385_103209722 104Ga0307386_106500361
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116. 1Ga0099809_100764671 2Ga0099809_110656491 3Ga0103951_105662872 4Ga0193269_10508881 5Ga0193263_10511381 6Ga0193086_10548051 7Ga0193425_10686051 8Ga0192872_10695001 9Ga0193500_10934431 10Ga0193360_10935831 11Ga0193265_101387682 12Ga0193087_101050381 13Ga0193078_102066191 14Ga0193449_101869451 15Ga0192857_101943361 16Ga0192857_102715751 17Ga0193040_10210871 18Ga0138346_109002282 19Ga0138345_106156741
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. 1Ga0138345_103005431 2Ga0099809_100764671 3Ga0099817_14644971 4Ga0099807_15538452 5Ga0186218_10118171 6Ga0193387_10676681 7Ga0193416_10764642 8Ga0192839_10599221 9Ga0193329_11070141 10Ga0193162_10878182 11Ga0193360_10935831 12Ga0193087_101050381 13Ga0193417_101941871 14Ga0193078_102066191 15Ga0193078_102163621 16Ga0193044_101796031 17Ga0193535_102824391 18Ga0192857_102238321 19Ga0192857_102715751 20Ga0193453_11117062 21Ga0138346_109002282 22Ga0138346_109233132 23Ga0138345_106156741 24Ga0138345_109420791
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.36% β-sheet: 0.00% Coil/Unstructured: 39.64%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	94.23%
Host-Associated	Host-Associated	5.77%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	94.23%
Human	Host-Associated → Human	1.92%
Invertebrates	Host-Associated → Invertebrates	3.85%

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	3.85%
Digestive System	Host-Associated → Human → Digestive System	1.92%
Marine	Environmental → Aquatic → Marine	94.23%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	3.85%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.92%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.58%
Unclassified	Environmental → Aquatic → Marine → Unclassified	83.65%

Habitat	Taxonomy	Distribution
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	83.65%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	10.58%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	3.85%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	3.85%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.92%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	83.65%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	9.62%
Surface Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Surface Ocean Water	0.96%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008013	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008031	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008043	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008832	Eukaryotic communities of water collected during the Tara Oceans expedition - TARA_A200000150	Environmental	Open in IMG/M
3300008998	Eukaryotic communities of water from different depths collected during the Tara Oceans expedition - TARA_A100000548	Environmental	Open in IMG/M
3300009274	Eukaryotic communities of water from the North Atlantic ocean - ACM10	Environmental	Open in IMG/M
3300017236	Metatranscriptome of marine eukaryotic communities from unknown location in 1/8 Erdschreiber medium with filtered sea water, at 22 C, 35 psu salinity and 247 ?mol photons light - Rosalina sp. (MMETSP0190_2)	Host-Associated	Open in IMG/M
3300018635	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_122 - TARA_N000001943 (ERX1782126-ERR1712207)	Environmental	Open in IMG/M
3300018656	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_093 - TARA_N000001292 (ERX1789469-ERR1719513)	Environmental	Open in IMG/M
3300018680	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_093 - TARA_N000001123 (ERX1789497-ERR1719250)	Environmental	Open in IMG/M

Showing 1 to 10 of 67 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099809_100764671	3300008013	Coral	MVLALKHVVVIATILTFMFFGMLGTCCMDGACGGDTDGWAYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEDEREKALAK*
Ga0099809_110656491	3300008013	Coral	LLIINKMVLAFKHIVVLAMTLTFLFFGILGTCCQDGACGGEAEGWKYVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEEEREQARAK*
Ga0099817_14644971	3300008031	Coral	MVLSLKHIVVLSMTLTFMFFGILGTCCQDGACGGETEGWRYVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEEEREQALSAKQ*
Ga0099807_15538452	3300008043	Coral	MVLAFKHIVVLAMTLTFLFFGILGTCCQDGACGGEAEGWKYVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEEEREQARAK*
Ga0103951_104408601	3300008832	Marine	MGALKHIVVLSMVLTFMFFGMLGTCCQDGACGGDETGWQYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHV*
Ga0103951_105662872	3300008832	Marine	MVMAMKHVVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQIQDDKEKAAAAAI*
Ga0103502_102835111	3300008998	Marine	MAGNMALKHIVVLSMVLTFMFFGMLGTCCQDGACGGDETGWQYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHV*
Ga0103878_10278001	3300009274	Surface Ocean Water	MVMAMKHIVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQVQDAKEKAAAAAI*
Ga0186218_10118171	3300017236	Host-Associated	MVLALKHIVVIAMTLTFLFFGILGTCCQDGACGGETEGWKYVGYFGWGLGLASTCVGIITSQGGSSSDFNKLEAEREEAGKK
Ga0186218_10167601	3300017236	Host-Associated	MVLALKHIVVIAMTLTFLFFGILGTCCQDGACGGETEGWKYVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEAEREQARAK
Ga0193376_10257611	3300018635	Marine	MVLSLKHIVVLSMVLTCMFFGILGTCCQDGACGGETEGWRYIGYLGWGLGLASTCVGIITSQGGSSSTDLNKLEEERAQAEASKV
Ga0193269_10508881	3300018656	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANAGKA
Ga0193263_10511381	3300018680	Marine	DTTFPSTMVMSSKHIVVLSMVVTFMFFGILGTCCMDGACGGDLAAWEFVGYFGWALGLISTCVGIITSQGGGGSMDLNKIQEDKEKAAAAS
Ga0192952_10341832	3300018683	Marine	LSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLMSTCVGIITSQGGSTDLNKVEEEREQANANKA
Ga0193086_10548051	3300018685	Marine	SKLNPEYKTNLNQFIMVLALKHIVVLSMTLTFMFFGMLGTCCEDGACGGDETGWQYVGYFGWGLGLASTCVGIITSQGGSSDLNKMEEEKSAAASKV
Ga0193086_10639381	3300018685	Marine	LNMVLSLKHIVVLSMTLTFMFFGILGTCCQDGACGGDTVGWQYVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEEEREHALAK
Ga0193403_10669801	3300018700	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREQALSNKA
Ga0193267_10646641	3300018705	Marine	MVLALKHVVVLSVVLLFMFFGILGTCCQDGACGGNPEAFEYIGYFGWAFGLMSTCVGIITSQGGSTDLNKVEEEREAALSHKA
Ga0192866_10579932	3300018720	Marine	MAMKHVVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQIQDDKEKAAAAAI
Ga0192866_10626231	3300018720	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANANKA
Ga0193418_10561181	3300018737	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFQYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREQANANKA
Ga0193418_10634321	3300018737	Marine	MVMSSKHIVVLSMVITFMFFGILGTCCMDGACGGDLAAWEFVGYFGWALGLISTCVGIITSQGGGGSMDLNKIQADKEKAAAATS
Ga0193495_10565181	3300018738	Marine	MVLALKHVVVLSTILTFFFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANSYKA
Ga0192974_10749721	3300018739	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLMSTCVGIITSQGGSTDLNKVEEEREQANSIKK
Ga0193387_10676681	3300018740	Marine	MVLAMKHIVTVSLILTFMFFGMLGTCCQDGACGGDNIGWEYVGYFGWGLGLAFTCVGIITSQGGSSDLNKAEEEKAAANAATV
Ga0193425_10686051	3300018743	Marine	VISMIMTFFFFGILGTCCQDGACGGDQTGWEYVGYFGFGLGLASTCVGIITSQGGGSSDLNKMEEEKERAAAAKV
Ga0193416_10764642	3300018748	Marine	QQLQARLQSNDPSPIKMVLALKHVVVLSVVLLFMFFGILGTCCQDGACGGNPEAFQYIGYFGWAFGLMSTCVGIITSQGGSTDLNKVEEEREAALSHKA
Ga0192839_10599221	3300018777	Marine	MVMAFKHIVVISMIMTFFFFGILGTCCQDGACGGDQTGWEYVGYFGFGLGLASTCVGIITSQGGGSSDLNKMEEEKERAAAAKV
Ga0192839_10758101	3300018777	Marine	ASSNHRDQSTPHNMVLALKHVVVLSTILTFFFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANSYKA
Ga0193388_10777131	3300018802	Marine	KHIVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWAFGLLATCLGIITSQGGGSMDLNQVQDAKEKAAAAAI
Ga0193329_11070141	3300018804	Marine	MVMSLKHIVVLTMTLTFMFFGMLGTCCQDGACGGDHLGWSYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHV
Ga0192872_10695001	3300018813	Marine	MGSITKPHRSTLSASPLTKPTHTSKMVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREQALSNKA
Ga0192872_10750221	3300018813	Marine	TWGHGDPHKAPHTFNMVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANANKA
Ga0192877_11198462	3300018834	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLMSTCVGIITSQGGSTDLNKVEEEREQANANKA
Ga0193042_11302751	3300018845	Marine	TNHTSITKPHRSTLSASPRTNPTHTSKMVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREQALSNKA
Ga0193042_11403251	3300018845	Marine	TAVNHQAPTHTFNMVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLMSTCVGIITSQGGSTDLNKVEEEREAANANKA
Ga0193500_10934431	3300018847	Marine	TMVMAFKHVVTLSMVISFMFFGILGTCCQDGACGGDTEGWKWVGIFGWAFGLASTCLGIITSQGGGGSDLDKMAEEKAKANAAG
Ga0193005_10368051	3300018849	Marine	MVMSSKHIVVLSMVITFMFFGILGTCCMDGACGGDLAAWEFVGYFGWALGLLSTCVGIITSQGGGGSMDLNKIQADKEKAAAATS
Ga0193359_11068261	3300018865	Marine	PASSTHRDQSTPHNMVLALKHVVVLSTILTFFFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANSYKA
Ga0192859_10578021	3300018867	Marine	MVFALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFQYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREQANANKA
Ga0192859_10640262	3300018867	Marine	MSLKHIVVLSMTLTFMFFGMLGTCCQDGACGGDHLGWSYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHV
Ga0193162_10799342	3300018872	Marine	MVMAMKHVVVMSLIFTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNEIQDEKTKAAAAAI
Ga0193162_10878182	3300018872	Marine	MVMAMKHVVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQIQDDKEKAAAAAI
Ga0193162_10973452	3300018872	Marine	MVLALKHVVVLSTILTFFFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLMSTCVGIITSQGGSTDLNKVEEEREAANSYKA
Ga0193360_10935831	3300018887	Marine	MTCSIAFKHVVVLAMILTFMFLGVLGTCCQDGACGGDLDGWKYVGYAGWTLGLLSTCVGIISSQGGGIGDDEEKKVAA
Ga0193268_12139311	3300018898	Marine	MVMSSKHIVVLSMVVTFMFFGILGTCCMDGACGGDLAAWEFVGYFGWALGLISTCVGIITSQGGGGSMDLNKIQEDKEKAAAAS
Ga0193262_100743351	3300018923	Marine	VLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANAGKA
Ga0192921_101561582	3300018929	Marine	MGFKHVVTLSMVISFMFFGILGTCCQDGACGGDTEGWKWVGIFGWAFGLASTCLGIITSQGGGGSDLDKMAEEKAKANAAG
Ga0193265_101387682	3300018941	Marine	QILANPHTFTMVMSLKHVVTLSMVITFMFFGILGTCCQDGACGGNDEGWQYVGYLGWGFGIMSTCVGIITSQGGSIDLDKQQEEKTKANAY
Ga0193531_103398671	3300018961	Marine	MVLSLKHIVVLSMTLTFMFFGILGTCCQDGACGGESEGWRFVGYFGWGLGLASTCVGIITSQGGSSSTDLNQLQEEREQALSKA
Ga0193087_101050381	3300018964	Marine	MGVMASKHVVVLSVIITFMFFGVIGTCCMDGACGGDLDAWAYVGYFGWVLALMATCVGIITSQGGSGSMDLNEIQAAKELALAAME
Ga0193087_101659511	3300018964	Marine	MGAFKHVVTLSMVISFMFFGILGTCCQDGACGGDTEGWKWVGIFGWAFGLASTCLGIITSQGGGGSDLDKMAEEKAKANAAG
Ga0193087_102479951	3300018964	Marine	HGMAMKHVVVMSLIFTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNEIQDEKTKAAAAAI
Ga0193417_101941871	3300018970	Marine	FPFTMVMSSKHIVVLSMVITFMFFGILGTCCMDGACGGDLAAWEFVGYFGWALGLISTCVGIITSQGGGGSMDLNKIQADKEKAAAATS
Ga0193326_100538911	3300018972	Marine	MVMAMKHIVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWAFGLLATCLGIITSQGGGSMDLNQVQDAKEKAAAAAI
Ga0193326_100777791	3300018972	Marine	VVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANAGKA
Ga0192873_103509131	3300018974	Marine	MVMAFKHVVVVSMIMTFFFFGILGTCCQDGACGGDKTGWEYVGYFGFGLGLASTCVGIVTSQGGGSSDLNKMEEEKEKAAKV
Ga0192873_103633271	3300018974	Marine	HGVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLMSTCVGIITSQGGSTDLNKVEEEREAANANKA
Ga0193540_101643441	3300018979	Marine	HHQAASVNTFSFTLTKPTHTSKMVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREQALSNKA
Ga0193430_101429561	3300018995	Marine	MGVISLILTFMFFGMLGTCCQDGACGGDNVGWEYVGYFGWGLGLAFTCVGIITSQGGSSDLNKAEEEKAAANAANANV
Ga0193430_101780211	3300018995	Marine	TWVVLSVVLTFMFFGILGTCCQDGACGGNPEAFQYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREQANANKA
Ga0193430_101861921	3300018995	Marine	MGIVVLSMTLTFMFFGMLGTCCQDGACGGDEIGWQYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHV
Ga0192916_101369802	3300018996	Marine	AFKHVVTLSMGISFMFFGILGTCCQDGACGGDTEGWKWVGIFGWAFGLASTCLGIITSQGGGGSDLDKMAEEKAKANAAG
Ga0192953_101902813	3300019000	Marine	HGVVLSMTLTFMFFGMLGTCCQDGACGGDEIGWSYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHA
Ga0193078_102065051	3300019004	Marine	VVVSMIMTFFFFGILGTCCQDGACGGDKTGWEYVGYFGFGLGLASTCVGIVTSQGGGSSDLNKMEEEKEKAAKV
Ga0193078_102066191	3300019004	Marine	MGKHIVVLSMTLTFMFLGMLGTCCQDGACGGDETGWKVIGILGWCLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAAASV
Ga0193078_102163621	3300019004	Marine	MGNMVLSLKHIVVLSMVLTCMFFGILGTCCQDGACGGETEGWRYIGYLGWGLGLASTCVGIITSQGGSSSTDLNKLEEERAQAEASKV
Ga0193361_102739051	3300019008	Marine	AMILTFMFLGVLGTCCQDGACGGDLDGWKYVGYAGWTLGLLSTCVGIISSQGGGIGDDEEKKVAA
Ga0193044_101796031	3300019010	Marine	MGSHTQVTMVMSMKHIVVLSLVITFAFFGILGTCCQDGACGGNPEAWEFIGYFGWALGLASTCVGIITSQGGGGSMDLNQIQADKEKAAAAQS
Ga0193043_102626621	3300019012	Marine	HQAASVNTFSFTLTKPTHTSKMVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREQALSNKA
Ga0193525_104599132	3300019015	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREQANANKT
Ga0193569_103462301	3300019017	Marine	MVMAMKHVVVMSLILTFMFFGALGTCCQDGACGGNEEGWQYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQIQDDKEKAAAAAI
Ga0193569_103688102	3300019017	Marine	MVLSLKHIVVLTMVLTCMFFGILGTCCQDGACGGETEGWRYIGYLGWGLGLASTCVGIITSQGGSSSTDLNKLEEERAQAEANKV
Ga0193561_101814982	3300019023	Marine	MVMSMKHIVVLSLVITFAFFGILGTCCQDGACGGNPEAWEFIGYFGWALGLASTCVGIITSQGGGGSMDLNQIQADKEKAAAAQS
Ga0193561_103027331	3300019023	Marine	MVLALKHVAVLSVVLTFMFLGILGTCCQDGACGGNPEAFEYVGYFGWGFGLMSTCVGIITSQGGSSSTDLNKLEEEREQALSHKA
Ga0193535_102502502	3300019024	Marine	MVMAMKHIVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQIQDDKEKAAAAAI
Ga0193535_102824391	3300019024	Marine	MVLSLKHIVVLSMTLTFMFFGILGTCCQDGACGGSEEGFRFVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEEERAAAEAGKV
Ga0193449_101869451	3300019028	Marine	NPHHSFIRNQQTLPPLPSTMVMASKHVVVLSVIITFMFFGVLGTCCMDGACGGDLDAWAYVGYFGWALGLMATCVGIITSQGGSGSMDLNQIQAAKELAAAAVN
Ga0193558_101424302	3300019038	Marine	MVMASKHVVVLSVIITFMFFGVIGTCCMDGACGGDLDAWAYVGYFGWVLALMATCVGIITSQGGSGSMDLNEIQAAKELALAAME
Ga0192857_100991041	3300019040	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANASKA
Ga0192857_101943361	3300019040	Marine	HGGSYQRHQATEIKAPHPHNMVLALKHVVVLSTILTFFFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANSYKA
Ga0192857_102199852	3300019040	Marine	HGGSYQRQQATEIKAPHPHNMVLALKHVVVLSTILTFFFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANSYKA
Ga0192857_102238321	3300019040	Marine	MGYKTNLNQFIMVLALKHIVVLSMTLTFMFFGMLGTCCEDGACGGDETGWQYVGYFGWGLGLASTCVGIITSQGGSSDLNKMEEEKSAAASKV
Ga0192857_102711441	3300019040	Marine	MVLSLKHIVVLSMTLTFMFFGILGTCCQDGACGGSEEGFRFVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEEEREMALKV
Ga0192857_102715751	3300019040	Marine	MVMSLKHIVTLSLVIMFMFFGILGTVCQDGACGGEPEGWKFVGYFGWGLGLASTCVGIITSQGGSSSTDLNKLEEEREMALKNT
Ga0192857_103264222	3300019040	Marine	VLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREQALSNKA
Ga0192857_103618411	3300019040	Marine	MGMAFKHVVVVSMIMTFFFFGILGTCCQDGACGGDKTGWEYVGYFGFGLGLASTCVGIVTSQGGGSSDLNKMEEEKEKAAAAKV
Ga0193356_103616062	3300019053	Marine	HGKHIVVLSMTLTFMFFGMLGTCCQDGACGGDEIGWQYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHV
Ga0193040_10210871	3300019094	Marine	ANKTYIFIMVMAFKHVVVLAMILTFFFFGILGTCCQDGACGGDNTGWEYVGYFGFGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAASAKV
Ga0193541_10856101	3300019111	Marine	MGTHTSKMVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREQALSNKA
Ga0192856_10357912	3300019143	Marine	VMAFKHVVTLSMVISFMFFGILGTCCQDGACGGDTEGWKWVGIFGWAFGLASTCLGIITSQGGGGSDLDKMAEEKAKANAAG
Ga0192856_10686511	3300019143	Marine	ILTFFFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREAANSYKA
Ga0192856_10728491	3300019143	Marine	MALKHIVVLSMVLTFMFFGMLGTCCQDGACGGDEKGWQYVGYFGWGLGLASTCVGIITSQGGGSSDLNKMEEEKAAAAASHV
Ga0193453_11117062	3300019147	Marine	MGTMVMAFKHVVTLSMVISFMFFGILGTCCQDGACGGDTEGWKWVGIFGWAFGLASTCLGIITSQGGGGSDLDKMAEEKAKANAAG
Ga0063136_10701731	3300021896	Marine	MVMAMKHIVVMSLILTFMFFGALGTCCQDGACGGNEEGWQYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQIQDDKEKAAAAAI
Ga0138346_106912691	3300031056	Marine	MAMSSKHIVVLSMVLLFMFFGILGTCCMDGACGGDLAAWEFVGYFGWALGLISTCVGIITSQGGGGSMDLNQIQADKEKAAAAS
Ga0138346_109002282	3300031056	Marine	MDVALKHLITLFFVIFFMFLGVLGTCCMDGACGGDAGTFEIVGYFGWALGLISTCVGIITSQGGSGSLDKMQEDKEKANAQ
Ga0138346_109233132	3300031056	Marine	MGMAFKHVVVVSMIMTFFFFGILGTCCQDGACGGDKIGWEYVGYFGFGLGLASTCVGIVTSQGGGSSDLNKMEEEKEKAAKV
Ga0138345_103005431	3300031121	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSTDLNKVEEEREQANANKA
Ga0138345_103898093	3300031121	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYVGYFGWGFGLASTCVGIITSQGGSSSTDLNKLEEEREAALSNKA
Ga0138345_106156741	3300031121	Marine	MVMSSKHIVVLCMTVTFMFFGILGTCCMDGACGGNDEGWEYVGYFGWALGLAATCLGIVTSQGGSGSMDLNNIQADKSKAAAK
Ga0138345_109420791	3300031121	Marine	MVMSLKHVVTLSMVITFMFFGILGTCCQDGACGGNDEGWQYVGYLGWGFGIMSTCVGIITSQGGSIDLDKQQEEKTKANAY
Ga0307385_103209722	3300031709	Marine	MKHVVVMSLILTFMFFGALGTCCQDGACGGNEEGWEYVGYFGWVFGLLSTCLGIITSQGGGSMDLNQIQDDKEKAAAAAI
Ga0307386_106500361	3300031710	Marine	MVLALKHVVVLSVVLTFMFFGILGTCCQDGACGGNPEAFEYIGYFGWGFGLMSTCVGIITSQGGSTDLNKVEEEREAANANKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metatranscriptome Family F096613

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences