Metagenome / Metatranscriptome Family F096530

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096530
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	92 residues
Representative Sequence	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT
Number of Associated Samples	88
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.92 %
% of genes near scaffold ends (potentially truncated)	25.96 %
% of genes from short scaffolds (< 2000 bps)	82.69 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.577 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (13.462 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (35.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.46% β-sheet: 19.78% Coil/Unstructured: 41.76%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00533	BRCT	20.19
PF12738	PTCB-BRCT	8.65
PF01507	PAPS_reduct	7.69
PF03120	DNA_ligase_OB	3.85
PF00004	AAA	0.96
PF16561	AMPK1_CBM	0.96
PF05157	T2SSE_N	0.96
PF04545	Sigma70_r4	0.96
PF12728	HTH_17	0.96
PF02630	SCO1-SenC	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	3.85
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
All Organisms	root	All Organisms	39.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
cellular organisms	root	All Organisms → cellular organisms	39.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.88 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	9.62 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	9.62 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.88 %
Verrucomicrobia bacterium SCN 57-15	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15	0.96 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.96 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	9.62 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	2.88 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Verrucomicrobia bacterium SCN 57-15	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	9.62 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	2.88 %
Candidatus Anammoximicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Verrucomicrobia bacterium SCN 57-15	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
Opitutaceae bacterium TSB47	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	9.62 %
Magnetospirillum sp. ME-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	2.88 %
unclassified Candidatus Anammoximicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Verrucomicrobia bacterium SCN 57-15	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.58 %
Opitutaceae bacterium TSB47	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	9.62 %
Magnetospirillum sp. ME-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	2.88 %
Candidatus Anammoximicrobium sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Verrucomicrobia bacterium SCN 57-15	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10081005	Not Available	1534	Open in IMG/M
3300003154\|Ga0052186_10107160	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300003465\|P52013CM_1003718	All Organisms → cellular organisms → Bacteria	19282	Open in IMG/M
3300005329\|Ga0070683_101180780	Not Available	735	Open in IMG/M
3300005445\|Ga0070708_100100579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	2647	Open in IMG/M
3300005445\|Ga0070708_102018767	Not Available	534	Open in IMG/M
3300009038\|Ga0099829_11530422	Not Available	551	Open in IMG/M
3300009175\|Ga0073936_10444455	Not Available	779	Open in IMG/M
3300009502\|Ga0114951_10015824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	5384	Open in IMG/M
3300009566\|Ga0130025_1025875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	533	Open in IMG/M
3300009618\|Ga0116127_1054680	Not Available	1137	Open in IMG/M
3300009641\|Ga0116120_1279991	Not Available	520	Open in IMG/M
3300009644\|Ga0116121_1157076	Not Available	719	Open in IMG/M
3300009669\|Ga0116148_1000034	All Organisms → cellular organisms → Bacteria	145684	Open in IMG/M
3300009868\|Ga0130016_10000502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15	85622	Open in IMG/M
3300011422\|Ga0137425_1060543	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Candidatus Anammoximicrobium → unclassified Candidatus Anammoximicrobium → Candidatus Anammoximicrobium sp.	871	Open in IMG/M
3300012206\|Ga0137380_10279191	Not Available	1500	Open in IMG/M
3300012353\|Ga0137367_10439722	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300012956\|Ga0154020_10117268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	2581	Open in IMG/M
3300013088\|Ga0163200_1100218	Not Available	881	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10190330	Not Available	1607	Open in IMG/M
3300014156\|Ga0181518_10129279	Not Available	1376	Open in IMG/M
3300014162\|Ga0181538_10583722	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300014165\|Ga0181523_10119334	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300014490\|Ga0182010_10827769	Not Available	526	Open in IMG/M
3300014494\|Ga0182017_10477743	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300014496\|Ga0182011_10596385	Not Available	703	Open in IMG/M
3300014498\|Ga0182019_10505072	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300014502\|Ga0182021_11400045	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300014502\|Ga0182021_11445672	Not Available	828	Open in IMG/M
3300014502\|Ga0182021_12818229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	584	Open in IMG/M
3300017931\|Ga0187877_1147951	Not Available	946	Open in IMG/M
3300017935\|Ga0187848_10316250	Not Available	650	Open in IMG/M
3300017946\|Ga0187879_10108839	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300017961\|Ga0187778_10098879	Not Available	1811	Open in IMG/M
3300017973\|Ga0187780_10584795	Not Available	801	Open in IMG/M
3300017988\|Ga0181520_10117002	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300018002\|Ga0187868_1200517	Not Available	694	Open in IMG/M
3300018022\|Ga0187864_10315140	Not Available	694	Open in IMG/M
3300018023\|Ga0187889_10079888	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300018033\|Ga0187867_10165381	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300018035\|Ga0187875_10081982	Not Available	1849	Open in IMG/M
3300018040\|Ga0187862_10120679	Not Available	1796	Open in IMG/M
3300018040\|Ga0187862_10253912	Not Available	1128	Open in IMG/M
3300018040\|Ga0187862_10835707	Not Available	532	Open in IMG/M
3300018044\|Ga0187890_10788993	Not Available	537	Open in IMG/M
3300018044\|Ga0187890_10844976	Not Available	517	Open in IMG/M
3300018088\|Ga0187771_10637323	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300021071\|Ga0194058_10118298	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300021072\|Ga0194057_10169489	Not Available	775	Open in IMG/M
3300021520\|Ga0194053_10038071	Not Available	2164	Open in IMG/M
3300021520\|Ga0194053_10226078	Not Available	738	Open in IMG/M
3300021602\|Ga0194060_10366990	Not Available	697	Open in IMG/M
3300021605\|Ga0194054_10083724	Not Available	1122	Open in IMG/M
3300022524\|Ga0224534_1008251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	3447	Open in IMG/M
3300022555\|Ga0212088_10700652	Not Available	603	Open in IMG/M
3300023088\|Ga0224555_1225946	Not Available	503	Open in IMG/M
3300023090\|Ga0224558_1014830	All Organisms → cellular organisms → Bacteria	4353	Open in IMG/M
3300023101\|Ga0224557_1106564	Not Available	1119	Open in IMG/M
3300023258\|Ga0224535_1117118	Not Available	567	Open in IMG/M
3300024232\|Ga0247664_1023954	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300025162\|Ga0209083_1156939	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300025473\|Ga0208190_1111930	Not Available	529	Open in IMG/M
3300025708\|Ga0209201_1000044	All Organisms → cellular organisms → Bacteria	199084	Open in IMG/M
3300025922\|Ga0207646_10902366	Not Available	784	Open in IMG/M
3300025939\|Ga0207665_11409129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300025944\|Ga0207661_10877587	Not Available	826	Open in IMG/M
3300027854\|Ga0209517_10112238	Not Available	1811	Open in IMG/M
3300027896\|Ga0209777_10286832	Not Available	1278	Open in IMG/M
3300027902\|Ga0209048_10100790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	2223	Open in IMG/M
3300029797\|Ga0243129_1097174	Not Available	883	Open in IMG/M
3300029990\|Ga0311336_10742092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. ME-1	844	Open in IMG/M
3300030000\|Ga0311337_11050152	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300030114\|Ga0311333_11802880	Not Available	532	Open in IMG/M
3300031834\|Ga0315290_10767679	Not Available	827	Open in IMG/M
3300031902\|Ga0302322_101518845	Not Available	818	Open in IMG/M
3300031997\|Ga0315278_10807540	Not Available	947	Open in IMG/M
3300032018\|Ga0315272_10012507	Not Available	3899	Open in IMG/M
3300032164\|Ga0315283_12173694	Not Available	547	Open in IMG/M
3300032164\|Ga0315283_12437793	Not Available	508	Open in IMG/M
3300032173\|Ga0315268_10013984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	8111	Open in IMG/M
3300032173\|Ga0315268_11555379	Not Available	673	Open in IMG/M
3300032173\|Ga0315268_12391645	Not Available	542	Open in IMG/M
3300032256\|Ga0315271_10044827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	3174	Open in IMG/M
3300032256\|Ga0315271_10234001	Not Available	1486	Open in IMG/M
3300032275\|Ga0315270_10442492	Not Available	833	Open in IMG/M
3300032397\|Ga0315287_11211165	Not Available	869	Open in IMG/M
3300032401\|Ga0315275_11226382	Not Available	815	Open in IMG/M
3300032770\|Ga0335085_10306055	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300032770\|Ga0335085_10327944	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300032782\|Ga0335082_10521263	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300032783\|Ga0335079_10268874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1869	Open in IMG/M
3300032783\|Ga0335079_10421750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1435	Open in IMG/M
3300032783\|Ga0335079_11248063	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300032805\|Ga0335078_10919782	Not Available	1048	Open in IMG/M
3300032828\|Ga0335080_10223517	Not Available	2065	Open in IMG/M
3300032828\|Ga0335080_10708418	Not Available	1048	Open in IMG/M
3300032892\|Ga0335081_10387979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1802	Open in IMG/M
3300032893\|Ga0335069_10005411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	18784	Open in IMG/M
3300032893\|Ga0335069_12776916	Not Available	502	Open in IMG/M
3300032897\|Ga0335071_10290134	Not Available	1590	Open in IMG/M
3300033158\|Ga0335077_11077134	Not Available	796	Open in IMG/M
3300033233\|Ga0334722_10114844	Not Available	2034	Open in IMG/M
3300033820\|Ga0334817_076770	Not Available	645	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Engineered	Engineered	4.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.04%
Terrestrial	Environmental → Terrestrial	46.15%
Wastewater	Engineered → Wastewater	3.85%
Bioreactor	Engineered → Bioreactor	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	47.12%
Soil	Environmental → Terrestrial → Soil	35.58%
Peat	Environmental → Terrestrial → Peat	9.62%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.92%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.92%
Marine	Environmental → Aquatic → Marine	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.96%
Unclassified	Engineered → Bioreactor → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	25.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.73%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.92%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer	0.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.35%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.46%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	11.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.92%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified	0.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.50%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	6.73%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	5.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.92%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.92%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.92%
Sediment	Environmental → Aquatic → Marine → Coastal → Unclassified → Sediment	0.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.96%
Aquifer Solids	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Aquifer Solids	0.96%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.96%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.96%
Bioreactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Bioreactor	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003154	Anode biofilm microbial communities from J. Craig Venter Institute, USA, in microbial fuel cells	Engineered	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009566	Methanogenic o-xylene degrading microbial communities from aquifer solids in Pensacola, Florida - enrichment culture X8-AB	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300013088	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021071	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-17m	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021605	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-10m	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300029797	Sediment microbial communities from Yellow Sea, Weihai, China - HGD.2	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033820	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-D	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100810053	3300000567	Peatlands Soil	MSALKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDCRVLLGLILEILNASPATREALQQDLAALT*
Ga0052186_101071601	3300003154	Bioreactor	MSTPEDGLVRFPPGTTTRSLGRNGTSITTGIYVDCFDHKITFTPQNSRRDMARCAIELPNDLRVLLGLILEILNASPATREALQQELAAPT*
P52013CM_100371813	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MSDPAYGLVKFPPGTTTRSLGRNGTFITIGIYVDSYRQRITLTPQNSRGEAARCNIDLPNDSRVLLDLIQEILKNSPSIRKALKQEL*
Ga0070683_1011807801	3300005329	Corn Rhizosphere	MSGPAYGLVKFPPGTTTRSLGRNGTFITIGLYVDSFRQRITLTPQNSRREAARCNIALPDDSHVLLDLIREILKNSPNTREALRQQLSSP*
Ga0070708_1001005793	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSGPAYGLVKFPPGTTTRSLGRNGTFITIGLYVDSFRQRITLTPQNSRREAARCNIALPDDSHVLLDLILEILKNSPNTREALRQELSSP*
Ga0070708_1020187672	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPAYGSVKFPRGTTTRSLGRNGTFITIGIYVDRHRQRITLTPQNSRGEAARCNIDLPKDSGVLLDLIREILKNSPRTREALKQELASL*
Ga0099829_115304221	3300009038	Vadose Zone Soil	MSAPEDGLVRFPPGATTRCLGRNGTFITTGIYVDSFDHKITLTPQNSRRDMARCAIELPNDSRVLLGLILEILKASPGTREALQQDLATPTEDSSLGH*
Ga0073936_104444551	3300009175	Freshwater Lake Hypolimnion	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDRFDHKITFTPQNSHGHMARCAIELPNDCRVLLELILGILNASPATREALQQELAAPT
Ga0114951_100158246	3300009502	Freshwater	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCAIELPNDCRLLLGLILEILNASRATREALQQELAAPNEA*
Ga0130025_10258752	3300009566	Aquifer Solids	ENGLVSFPPGTTTCCLGRNGMFTTVGIYVDGFDHKIILTPQHSRGQMARCTIELPNDSCVLLGLILELLKSNPGTREALQQEFAQTGDPPAQA*
Ga0116127_10546802	3300009618	Peatland	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDCRVLLELILEILNASPATRAALPQDLAAPP*
Ga0116120_12799911	3300009641	Peatland	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT*
Ga0116121_11570762	3300009644	Peatland	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIDLPNDPRVLLGLIGEILNTSPSTREGLQQELAAPTDTSSLRH*
Ga0116148_10000342	3300009669	Anaerobic Digestor Sludge	MSSSENGLVSFPPGTTTCCLGRNGIFTTVGIYVDSFDHKIILTPQHSRRQMARCIIELPNDSRLLLGLILELLKNSPGTLEALQQEFAQTGAPPAQE*
Ga0130016_1000050289	3300009868	Wastewater	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHDHMARCAIELPNDCRVLLGLILEILNASRATREALQQELAART*
Ga0137425_10605432	3300011422	Soil	MSDPAYGLVKFPPGMTTRSLGRNGTFITIGIYVDSYRQRITLTPQNSRGEAARCNIDLPNDSRALLDLIREILKNSRSTREALTQELASL*
Ga0137380_102791912	3300012206	Vadose Zone Soil	MSDPAYGLVKFPRGTATRSLGRNGTFITIGIYVDSHRQRITLTPQNSRGEAARCNIDLPKDSRVLLDLIREILKNSPSTREALKQELASL*
Ga0137367_104397223	3300012353	Vadose Zone Soil	MSDPAYGLVKFPPGTTTRSLGRNGTFITIGIYVDSHRQRFTLTPQNSRGEAARCNIDLPNDSRVLLDLIREILKNSPSTCEALKHELASL*
Ga0154020_101172683	3300012956	Active Sludge	MSGPAYGLVKFPPGTTTRSLGRNGTFITIGIYVDSYRQRIALTPQNSRGEAARCNIDLPNDSRVLLDLIREILKNSPSACEALKQELASP*
Ga0163200_11002183	3300013088	Freshwater	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCAIELPNDCRVLLGLILEILNASRATREALQQELAART*
(restricted) Ga0172375_101903304	3300013137	Freshwater	MSAPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSRRDMARCAIELPNDCRVLLGLILEILNASPATREALQQELAART*
Ga0181518_101292794	3300014156	Bog	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDPRVLLGLILEILNASPATRAALPQDLAAPP*
Ga0181538_105837222	3300014162	Bog	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHIITFTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT*
Ga0181523_101193343	3300014165	Bog	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRREMARCAIELPNDSRVLLELIFEILNASPVTRETLQQDLAALT*
Ga0182010_108277692	3300014490	Fen	MSAPEDGLVRFPPGTTTRCLGRNGTFITIGIYVDSFDHKITLTPQNSRRDMARCAIELPNDARVLLGLILEILKASPGTQEALQRDLAASTESSMLRH*
Ga0182017_104777432	3300014494	Fen	MSTPEDGLVRFPPGTTTRCLGRNGTFITIGIYVDSFDHKITLTPQNSRRDMARCAIELPNDARVLLGLILEILKANPGTREALHQDLAAPTEVRA*
Ga0182011_105963852	3300014496	Fen	MSAPEDGLVQFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELTART*
Ga0182019_105050723	3300014498	Fen	MSAPEDGLVQFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCAIELPNDCRVLLGLILEILNASRATREALQQELAAR
Ga0182021_114000452	3300014502	Fen	MSAPEDGLVRFPPGTTTRCLGRNGTFITIGIYVDSFDHKITLTPQNSRRDMARCAIELPNDARVLLGLILEILKANPGTREALHQDLAAPTESSSLRH*
Ga0182021_114456721	3300014502	Fen	MSAPEDGLVQFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELAART*
Ga0182021_128182292	3300014502	Fen	MSGLESGLVSFPPGTTTRCLGRNGTFTTIGLYVDSFDQRITLTPQNSRRQMARCAIELPNDSCVLLGLILEILKSSPNTRDALQRELAGMVDAPGSKQ*
Ga0187877_11479512	3300017931	Peatland	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIDLPNDPRVLLGLIGEILNTSPSTREGLQQELAAPTDTSSLRH
Ga0187848_103162502	3300017935	Peatland	RWNRRGPGSDLPPPHMSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDCRVLLELILEILNASPATRAALPQDLAAPP
Ga0187879_101088391	3300017946	Peatland	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT
Ga0187778_100988793	3300017961	Tropical Peatland	MSAPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDRFDHKITFTPQNSRRDMARCAIELPNDCRVLLGLILEILNASPATREALQ
Ga0187780_105847952	3300017973	Tropical Peatland	MSSSENGLVSFQSGTTTFCLGRNGIFTTVGIYVDSFDHKIILTPQHSRRQMARCTIQLPNDPRVMLGLILELLKNSPSTRAALQQEFVQTGTPPAQA
Ga0181520_101170021	3300017988	Bog	MSALKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRILLGLIFEILNA
Ga0187868_12005172	3300018002	Peatland	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDCRVLLELILEILNASPATRAALPQDLAAPP
Ga0187864_103151402	3300018022	Peatland	MSAPEDGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDCRVLLELILEILNASPATRAALPQDLAAPP
Ga0187889_100798881	3300018023	Peatland	MSPLKSGLVLFPPGTITRSLCRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPDDPRVLLGLILEILNASPATRAALPQ
Ga0187867_101653812	3300018033	Peatland	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT
Ga0187875_100819822	3300018035	Peatland	MSALKSGFVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT
Ga0187862_101206791	3300018040	Peatland	PPLCRWNRRCPGSDLQPPHMSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT
Ga0187862_102539122	3300018040	Peatland	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSHGHMARCAIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0187862_108357072	3300018040	Peatland	MSTLKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRILLGLIFEILNASPATREALQQDLAALP
Ga0187890_107889932	3300018044	Peatland	MSALKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQDLAALT
Ga0187890_108449761	3300018044	Peatland	HMSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIDLPNDPRVLLGLIGEILNTSPSTREGLQQELAAPTDTSSLRH
Ga0187771_106373233	3300018088	Tropical Peatland	MSAPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDRFDHKITFTPQNSRRDMARCAIELPNDCRVLLGLILEIL
Ga0194058_101182981	3300021071	Anoxic Zone Freshwater	MSLESPRPWKRFPTTTYEHPEDGLVRFPPGTTTLSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0194057_101694892	3300021072	Anoxic Zone Freshwater	MSLESPRPWKRFPTTTYEHPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0194053_100380712	3300021520	Anoxic Zone Freshwater	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDRFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0194053_102260783	3300021520	Anoxic Zone Freshwater	MSALKSGFVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALQQD
Ga0194060_103669902	3300021602	Anoxic Zone Freshwater	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSRRDMARCAIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0194054_100837241	3300021605	Anoxic Zone Freshwater	WKRFPTTTYEHPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDRFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0224534_10082514	3300022524	Soil	MSALKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHLITLTPQNSRRDMARCAIELPNDSRILLGLIFEILNASPATREALQQDLAALT
Ga0212088_107006522	3300022555	Freshwater Lake Hypolimnion	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0224555_12259462	3300023088	Soil	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDARVLLGLILEILKASPGTQEALQRDLAAPTESSILRH
Ga0224558_10148303	3300023090	Soil	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLILEILKTSPGTREALQQDLAAPTESPSLRH
Ga0224557_11065642	3300023101	Soil	MSALKSGLVRFPPGTTTRSLGRNGTFITIGIYVDSFNHIITLTPQNSRRDMARCAIELPNDCRVLLELILEILNASPATRAALPQDLAAPP
Ga0224535_11171182	3300023258	Soil	MSTLKSGLVRFPPGSTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRILLGLIFEILNASPATREALQQDLAALT
Ga0247664_10239541	3300024232	Soil	MSDPAYGLVKFPPGTTTRSLGRNGTFITIGIYVDRHRQRITLTPQNSRGEAARCNIDLPNDSRVLLDLIREILKNSPSTREALKQELASL
Ga0209083_11569392	3300025162	Freshwater	MSTLKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSSILLGLIFEILNASPATREALQQDLAAPT
Ga0208190_11119301	3300025473	Peatland	VRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIDLPNDPRVLLGLIGEILNTSPSTREGLQQELAAPTDTSSLRH
Ga0209201_1000044138	3300025708	Anaerobic Digestor Sludge	MSSSENGLVSFPPGTTTCCLGRNGIFTTVGIYVDSFDHKIILTPQHSRRQMARCIIELPNDSRLLLGLILELLKNSPGTLEALQQEFAQTGAPPAQE
Ga0207646_109023661	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RRWYWYGAGCHFQPHDMSDPAYGLVKFPPGTRTRSLGRNGTFITIGIYVDRHRQRITLTPQNSRGEAARCNIDLPNDSRVLLDLIREILKNSPSTREALKQELASL
Ga0207665_114091292	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PPGTRTRSLGRNGTFITIGLYVDSFRQRITLTPQNSRREAARCNIALPDDSHVLLDLILEILKNSPNTREALKRELSSP
Ga0207661_108775872	3300025944	Corn Rhizosphere	MSGPAYGLVKFPPGTTTRSLGRNGTFITIGLYVDSFRQRITLTPQNSRREAARCNIALPDDSHVLLDLIREILKNSPNTREALRQQLSSP
Ga0209517_101122383	3300027854	Peatlands Soil	MSALKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDCRVLLGLILEILNASPATREALQQDLAALT
Ga0209777_102868323	3300027896	Freshwater Lake Sediment	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDCRVLLGLILEILNASPATRAALPQDLAAPP
Ga0209048_101007903	3300027902	Freshwater Lake Sediment	MSTPEDGLVRFPPGTTTRSLGRNGTSITTGIYVDCFDHKITFTPQNSHGHMARCTIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0243129_10971742	3300029797	Sediment	MSSSENGLVSFPPGITTCCLGRNGILTTVGIYVDSFDHKIILTPQHSRRQMARCTIELPNDFRVMLGLILELLKNSPGTREALQQEFAETGAPPAQP
Ga0311336_107420922	3300029990	Fen	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNRTITLTPQNSRRDMARCAIELPNDCRVLLGLILEILNASPATREALQQDLAALP
Ga0311337_110501522	3300030000	Fen	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNRTITLTPQNSRRDMARCTIELPNDCRVLLGLILEILNASPATREALQQDLAALT
Ga0311333_118028801	3300030114	Fen	MSALKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDARVLLGLIFEILNASPATREALQQDLAAPT
Ga0315290_107676793	3300031834	Sediment	MSAPENGLVRFPPGTRTRSLGRNGTSITTGIYVDSFDHKITFTPQNSHGHMARCAIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0302322_1015188451	3300031902	Fen	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRILLGLIFEILNASP
Ga0315278_108075401	3300031997	Sediment	PLCGWNRHGPGSDFQPPHMSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCAIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0315272_100125076	3300032018	Sediment	MSTPEDGLVRFPPGTTTRSLGRNGTSITTGIYVDCFDHKITFTPQNSHGHMARCAIELPKDCRVLLGLILDILNASRATREALQQELAART
Ga0315283_121736942	3300032164	Sediment	GCHFQPPDMSDPAYGLVKFPPGTTTRSLGRNGTFITIGIYVDSYRQRITLTPQNSRDEAARCNIDLPNDSRVLLDLIREILKNSPGIREALKQEL
Ga0315283_124377931	3300032164	Sediment	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCAIELPNDCRVLLELILGILNASP
Ga0315268_100139846	3300032173	Sediment	MSDPAYGLVKFPPGTTTRSLGRNGTFITIGIYVDNYRQRITLTPQNSRGEAARCNIDLPIDSRVLLDLIREILKNSPSTREALNQELASL
Ga0315268_115553792	3300032173	Sediment	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDPRVLLGLILEILNASPATRAALPQDLAAPP
Ga0315268_123916452	3300032173	Sediment	MSALKSGLVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNVSPATREA
Ga0315271_100448274	3300032256	Sediment	MSGLAYGLVKFPPGSTTRSLGRNGTFITIGIYVDSYRQRITLTPQNSRDEAARCNINLPNDSRVLLDLIREILKNSPSIREVLKQELASP
Ga0315271_102340012	3300032256	Sediment	MSPLKSGLVRFPPGTITRSLGRNGTFITTGIYVDSFNHKITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATREALLQDLAALT
Ga0315270_104424922	3300032275	Sediment	MSGLAYGLVKFPPGSTTRSLGRNGTFITIGIYVDSYRQRITLTPQNSRGEAARCNIDLPNDSRVLLDLIREILKNSPSIREVLKQELASP
Ga0315287_112111653	3300032397	Sediment	MSAPENGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCAIELPNDCRVLLGLILEILNASRATREALQQELAART
Ga0315275_112263823	3300032401	Sediment	MSTPEDGLVRFPPGTTTRSLGRNGTFITTGIYVDCFDHKITFTPQNSHGHMARCAIDLPNDCRVLLGLILEILNASPATRAALQQELAART
Ga0335085_103060552	3300032770	Soil	MSALKSGLVRFPRGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDTRVLLGLIFEILNASPATREALQQELAAPTFRAPA
Ga0335085_103279443	3300032770	Soil	MSGSENGLVSFPPGTTTCCLGRNGIFTTVGIYVDSFDHKIILTPQHSRRQMARCTIELPNDPRVMLGLILELLKNSPGTRE
Ga0335082_105212632	3300032782	Soil	MSGSENGLVSFPPGTTTCCLGRNGMFTTVGIYVDGFDHKIILTPQHSRGQMARCTIELPNDSRVLLGLILELLKSNPGTREALQQEFAQTGAPPAQP
Ga0335079_102688742	3300032783	Soil	MSGSENGLVSFPPGTTTCCLGRNGMFTTVGIYVDGFDHKIILTPQHSRGQMARCTIELPNDSRVLLGLILELLKSNPGTREALQQEFAQTGDPPAQA
Ga0335079_104217503	3300032783	Soil	MSSSENGLVSFPPGTTTCCLGRNGIFTTVGIYVDSFDHKIILTPQHSRRQMARCTIELPNDSRLLLGLILELLKNSP
Ga0335079_112480632	3300032783	Soil	MSALKSGFVRFPPGTPTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEILNASPATRETLQQDLAALT
Ga0335078_109197822	3300032805	Soil	GFVRFPPGTTTRSLGRNGTFITMGIYVDSFNHIITLTPQNSRRDMARCAIELPNDTRVLLGLIFEILNASPATREALQQDLAALT
Ga0335080_102235172	3300032828	Soil	MSALKSGFVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRVLLGLIFEVLNASPATREALQQDLAALT
Ga0335080_107084183	3300032828	Soil	MSGSENGLVSFPPGTTTCCLGRNGIFTTVGIYVDGFDHKIILTPQHSRGQMARCTIELPNDSRVLLGLILELLKSNPGTREALQQEFAQTGDPPGPSVKE
Ga0335081_103879793	3300032892	Soil	MSSSENGLVSFPPGTTTCCLGRNGIFTTVGIYVDSFDHKIILTPQHSRRQMARCTIELPNDSRLLLGLILELLKNSPSTRAALQQEFAQTGTPPARA
Ga0335069_1000541117	3300032893	Soil	MSSSQNGLVSFPPGTTTCCLGRNGIFTTVGIYVDSFDHKIILTPQHSRRQMARCTIELPNDPRVMLGLILELLKNSPGTREALQQEFAQTGAPSGSSVKEIQFIP
Ga0335069_127769162	3300032893	Soil	MSALKSGLVRFPRGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDTRVLLGLIFEILNASPATREALQQELAALT
Ga0335071_102901343	3300032897	Soil	MSALKSGFVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDCRVLLGLILEILNASRATREALQQELTART
Ga0335077_110771341	3300033158	Soil	MSSSENGLVSFPPGTTTCCLGRNGICTTVGIYVGSFDHKIILTPQHSRRQMARCTIELPNDSRLLLGLILELLKNSPGTLEALQQEFAQTGAPPAQPW
Ga0334722_101148441	3300033233	Sediment	DGLVRFPPGTTTRSLGRNGTFITTGIYVDSFDHRITFTPQNSHGHMARCAIALPNDSHVLLGLIFEILNASRATREALQQELAART
Ga0334817_076770_10_285	3300033820	Soil	MSALKSGLVRFPPGTTTRSLGRNGTFITTGIYVDSFNHIITLTPQNSRRDMARCAIELPNDSRILLGLIFEILNASPATREALQQDLAALT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters