Metagenome / Metatranscriptome Family F096265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096265
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	98 residues
Representative Sequence	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE
Number of Associated Samples	78
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.52 %
% of genes near scaffold ends (potentially truncated)	23.81 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.190 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (25.714 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (38.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.80% β-sheet: 0.00% Coil/Unstructured: 83.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07238	PilZ	7.62
PF12787	EcsC	3.81
PF00072	Response_reg	1.90
PF04972	BON	1.90
PF07589	PEP-CTERM	1.90
PF02954	HTH_8	1.90
PF07883	Cupin_2	0.95
PF08448	PAS_4	0.95
PF13527	Acetyltransf_9	0.95
PF00724	Oxidored_FMN	0.95
PF13526	DUF4125	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.95
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.19 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.19 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.19 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.76 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	61.90 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	61.90 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.81 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.86 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.86 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.95 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000124\|BS_KBA_SWE12_21mDRAFT_c10083041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	802	Open in IMG/M
3300000124\|BS_KBA_SWE12_21mDRAFT_c10115278	Not Available	653	Open in IMG/M
3300000241\|BS_KBA_SWE21_205mDRAFT_10093671	Not Available	651	Open in IMG/M
3300000311\|WSSedA1Ba3DRAFT_1006413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2955	Open in IMG/M
3300001373\|YBMDRAFT_10181251	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300002961\|JGI11641J44799_10207636	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	550	Open in IMG/M
3300003432\|JGI20214J51088_10145680	All Organisms → cellular organisms → Bacteria → Proteobacteria	1675	Open in IMG/M
3300003432\|JGI20214J51088_10445673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	854	Open in IMG/M
3300003473\|FeGluAir_10176428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	914	Open in IMG/M
3300003541\|JGI20214J51650_10108465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1895	Open in IMG/M
3300003541\|JGI20214J51650_10900703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	618	Open in IMG/M
3300003991\|Ga0055461_10105982	Not Available	712	Open in IMG/M
3300004015\|Ga0055462_10317536	Not Available	515	Open in IMG/M
3300004151\|Ga0066602_10450224	Not Available	583	Open in IMG/M
3300004155\|Ga0066600_10084168	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1209	Open in IMG/M
3300004781\|Ga0062379_10195925	Not Available	535	Open in IMG/M
3300006224\|Ga0079037_100021769	All Organisms → cellular organisms → Bacteria → Proteobacteria	4536	Open in IMG/M
3300006930\|Ga0079303_10132734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	964	Open in IMG/M
3300009009\|Ga0105105_10001951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	8498	Open in IMG/M
3300009009\|Ga0105105_10999632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	519	Open in IMG/M
3300009037\|Ga0105093_10161847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1129	Open in IMG/M
3300009075\|Ga0105090_10104151	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300009075\|Ga0105090_10530491	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	715	Open in IMG/M
3300009081\|Ga0105098_10225391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	875	Open in IMG/M
3300009082\|Ga0105099_11026738	Not Available	526	Open in IMG/M
3300009082\|Ga0105099_11138921	Not Available	501	Open in IMG/M
3300009085\|Ga0105103_10053543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2041	Open in IMG/M
3300009091\|Ga0102851_11767126	Not Available	696	Open in IMG/M
3300009111\|Ga0115026_10004157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5582	Open in IMG/M
3300009131\|Ga0115027_10005770	All Organisms → cellular organisms → Bacteria → Proteobacteria	4163	Open in IMG/M
3300009131\|Ga0115027_10065098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1950	Open in IMG/M
3300009131\|Ga0115027_11487358	Not Available	555	Open in IMG/M
3300009165\|Ga0105102_10193558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1013	Open in IMG/M
3300009165\|Ga0105102_10365885	Not Available	760	Open in IMG/M
3300009166\|Ga0105100_10043392	All Organisms → cellular organisms → Bacteria	2609	Open in IMG/M
3300009167\|Ga0113563_10343078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1569	Open in IMG/M
3300009167\|Ga0113563_13890404	Not Available	506	Open in IMG/M
3300009168\|Ga0105104_10479279	Not Available	698	Open in IMG/M
3300009169\|Ga0105097_10305477	Not Available	879	Open in IMG/M
3300009169\|Ga0105097_10322673	Not Available	854	Open in IMG/M
3300009171\|Ga0105101_10082906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1557	Open in IMG/M
3300009179\|Ga0115028_10010377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3509	Open in IMG/M
3300009179\|Ga0115028_10122616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1520	Open in IMG/M
3300009179\|Ga0115028_10657515	Not Available	793	Open in IMG/M
3300009755\|Ga0115592_1141196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	755	Open in IMG/M
3300011407\|Ga0137450_1041015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	827	Open in IMG/M
3300011408\|Ga0137460_1115817	Not Available	533	Open in IMG/M
3300013232\|Ga0170573_11254490	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300013315\|Ga0173609_10342370	Not Available	669	Open in IMG/M
3300013315\|Ga0173609_10818707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	759	Open in IMG/M
3300014306\|Ga0075346_1075430	Not Available	703	Open in IMG/M
3300022185\|Ga0079039_1400265	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300024056\|Ga0124853_1110428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	754	Open in IMG/M
3300025573\|Ga0210133_1147693	Not Available	523	Open in IMG/M
3300026464\|Ga0256814_1007653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	990	Open in IMG/M
3300027683\|Ga0209392_1142066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	750	Open in IMG/M
3300027715\|Ga0208665_10140345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	754	Open in IMG/M
3300027716\|Ga0209682_10065947	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300027721\|Ga0209492_1258737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	587	Open in IMG/M
3300027721\|Ga0209492_1260649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	585	Open in IMG/M
3300027723\|Ga0209703_1087658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1200	Open in IMG/M
3300027726\|Ga0209285_10036751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1430	Open in IMG/M
3300027739\|Ga0209575_10200292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	708	Open in IMG/M
3300027762\|Ga0209288_10063018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1127	Open in IMG/M
3300027792\|Ga0209287_10178834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	807	Open in IMG/M
3300027796\|Ga0209373_10158666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	985	Open in IMG/M
3300027800\|Ga0209800_10283507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	700	Open in IMG/M
3300027841\|Ga0209262_10358766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300027871\|Ga0209397_10467215	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300027877\|Ga0209293_10008703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3161	Open in IMG/M
3300027885\|Ga0209450_10257859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1250	Open in IMG/M
3300027885\|Ga0209450_10359948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1058	Open in IMG/M
3300027887\|Ga0208980_10008841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5942	Open in IMG/M
3300027890\|Ga0209496_10000806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4904	Open in IMG/M
3300027890\|Ga0209496_10038330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1727	Open in IMG/M
3300027899\|Ga0209668_10337093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	976	Open in IMG/M
3300027956\|Ga0209820_1120919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	717	Open in IMG/M
3300027972\|Ga0209079_10214904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	657	Open in IMG/M
3300027975\|Ga0209391_10145309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1017	Open in IMG/M
3300027975\|Ga0209391_10160183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	957	Open in IMG/M
3300033408\|Ga0316605_11689737	Not Available	616	Open in IMG/M
3300033408\|Ga0316605_11953257	Not Available	571	Open in IMG/M
3300033408\|Ga0316605_11970051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	568	Open in IMG/M
3300033413\|Ga0316603_10413431	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300033413\|Ga0316603_10610540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1013	Open in IMG/M
3300033413\|Ga0316603_11050820	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	770	Open in IMG/M
3300033414\|Ga0316619_12200628	Not Available	505	Open in IMG/M
3300033416\|Ga0316622_100265323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1871	Open in IMG/M
3300033418\|Ga0316625_100425572	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300033418\|Ga0316625_101073902	Not Available	725	Open in IMG/M
3300033419\|Ga0316601_100902520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	878	Open in IMG/M
3300033434\|Ga0316613_10339867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1000	Open in IMG/M
3300033482\|Ga0316627_100120821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1854	Open in IMG/M
3300033483\|Ga0316629_10712937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	760	Open in IMG/M
3300033485\|Ga0316626_10018479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4229	Open in IMG/M
3300033487\|Ga0316630_10927124	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300033488\|Ga0316621_11271289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	558	Open in IMG/M
3300033488\|Ga0316621_11456289	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300033521\|Ga0316616_103230119	Not Available	614	Open in IMG/M
3300033521\|Ga0316616_103402038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	599	Open in IMG/M
3300033557\|Ga0316617_100930125	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300033557\|Ga0316617_102093775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	582	Open in IMG/M
3300033557\|Ga0316617_102319927	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300034128\|Ga0370490_0035096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1658	Open in IMG/M
3300034169\|Ga0370480_0033091	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1806	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Engineered	Engineered	2.86%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	69.52%
Terrestrial	Environmental → Terrestrial	27.62%
Wastewater	Engineered → Wastewater	2.86%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	54.29%
Soil	Environmental → Terrestrial → Soil	25.71%
Marine	Environmental → Aquatic → Marine	13.33%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	2.86%
Sediment	Environmental → Aquatic → Sediment	1.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.90%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	37.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	12.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.57%
Pond	Environmental → Aquatic → Freshwater → Pond	5.71%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.86%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	37.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	24.76%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	9.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.62%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	5.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.86%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.86%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	25.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	21.90%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	11.43%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	6.67%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.71%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	5.71%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.86%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.86%
Marine	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine	2.86%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.90%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.95%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.95%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000124	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21m	Environmental	Open in IMG/M
3300000241	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBB sample SWE 21_20.5m	Environmental	Open in IMG/M
3300000311	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300001373	YB-Mouth-sed	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003473	Fe-reducing enrichment culture from wetland. Sample 3 with anaerobic and aerobic cycling.	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003991	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009755	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011408	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT723_2	Environmental	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025573	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BS_KBA_SWE12_21mDRAFT_100830411	3300000124	Marine	NKILFWGVLFISAVSLVNIPGACLAQPSDNSKINNKQETSPKELTADQQGETKQDRKIRSVQGLKILELRENPAQTVIKTTGLALKEPAPPVANNE*
BS_KBA_SWE12_21mDRAFT_101152781	3300000124	Marine	LANKILFFWVLFISAVSLVNIPGACLAQPADNSKINKQESSPKELTADQQGETKQDRKIRSVQGLRILEVRENPAQTVIKTTGLISARGGGLIVSAAN*
BS_KBA_SWE21_205mDRAFT_100936711	3300000241	Marine	MKSYQSNVRRILLANKILFFWVLFISAVSLVNIPGACLAQPADNSKINKQESSPKELTADQQGETKQDRKIRSVQGLRILEVRENPAKTVIKTTGLTLKEPELPSGK*
WSSedA1Ba3DRAFT_10064133	3300000311	Wetland	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQAVIKTTGLTLKEPVSPVANNE*
YBMDRAFT_101812511	3300001373	Marine Estuarine	MKSLKSNVRRILLANKILFFGVLFISAVSLVNIPGLCFAQPADSAQINKRDTSPKELTADQQGETKQXIKTTGLSLKEPAPPVAPNE*
JGI11641J44799_102076362	3300002961	Wetland	VNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQAVIKTTGLTLKEPVSPVANNE*
JGI20214J51088_101456803	3300003432	Wetland	MAYKKLLFMVLFISAVFLVNIQGAGLAQPGDNTKIIKQYTSPKELTVNQQVETKQDRKIRPVQGLRILEPSENPARTMIKATDPTRKEPATTVATDK*
JGI20214J51088_104456731	3300003432	Wetland	MANKILFFLVLFILAISLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVINTTGLTRKEPAPSVVNNE*
FeGluAir_101764282	3300003473	Wetland Sediment	MAYKKLLFTVLFISAVFLVXLTKQDTSPKEITVDQQVETKQDRKIRPVQGLRIVELSENPARMVIKATDLNRKEPAPTVATDK*
JGI20214J51650_101084654	3300003541	Wetland	MANNILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVELSENPAQTVIKTTGPTLKEPAPPVANNK*
JGI20214J51650_109007032	3300003541	Wetland	MANKILFFLVLFISAVSFVNIPGACLAQPADDTKINKQDTSPKGLTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE*
Ga0055461_101059821	3300003991	Natural And Restored Wetlands	MKSIQSNVRRILLANKTLFFLVLFISAVSLVNIRGICLAQPADNTKINKQDTSPRELTSDQQGEKKQDRKIRSVQGLKILELRENPAQTVIITTGFTQKEPAPPLANNE*
Ga0055462_103175362	3300004015	Natural And Restored Wetlands	ISAVSLVNIRGICLAQPADNTKINKQDTSPRELTSDQQGEKKQDRKIRSVQGLKILELRENPAQTVIITTGFTQKEPAPPLANNE*
Ga0066602_104502242	3300004151	Freshwater	MANKTLFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQMEINTTGLTRKEPTPPMANKE*
Ga0066600_100841682	3300004155	Freshwater	MANKKLLLMVLFLSAVSLFSIQGVGLAQADDNTKINKQDTSQKELTVDQQVETKPDRKIRPVQGLRILELRANPATTEIKATDLTRKEPAPTVAADK*
Ga0062379_101959251	3300004781	Wetland Sediment	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKMTGLTLKEPASPVANNE*
Ga0079037_1000217696	3300006224	Freshwater Wetlands	MAYKKLLFMVLFISAVFLVNIQGGSLAQPGDNTKINKQDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK*
Ga0079303_101327342	3300006930	Deep Subsurface	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE*
Ga0105105_100019514	3300009009	Freshwater Sediment	METTAEKFFLSRFRKEKRMAYKKLLFMVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTVDQQVETKPDRKIRPVQGLRILELSENPARTVTKATDLSRKEPAPTVATDK*
Ga0105105_109996322	3300009009	Freshwater Sediment	DEKHSIQRRENLMANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKELSADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK*
Ga0105093_101618473	3300009037	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKELSADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK*
Ga0105090_101041512	3300009075	Freshwater Sediment	MANKMLFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK*
Ga0105090_105304911	3300009075	Freshwater Sediment	MANKILPFMILFISSVFLVNIPGACLAQPGANTKINKQDTSPKDLAVDRQVETKQDRKIKNVQGLRILELRETPAQTMIKATDLTRKEPAALVAPEE*
Ga0105098_102253911	3300009081	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE*
Ga0105099_110267381	3300009082	Freshwater Sediment	MKSLQSNTRRILLVNKKLFLGVLFISAVSLVNVPGACLAQPADNLKISKQETSPKELTADQQGDTKQDRKIRSVQGLKIVGLSENPAQTVIKT
Ga0105099_111389211	3300009082	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAEPADNTKINKQDTSPKELSADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKT
Ga0105103_100535432	3300009085	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK*
Ga0102851_117671261	3300009091	Freshwater Wetlands	SAVFLVNIPGACLAQPADDTKINKRDISPKELTADQQGEAKQDRKIRNVQGLRILELRENSAQTMIKATDLTRKEPGLPLANDE*
Ga0115026_100041574	3300009111	Wetland	METTAEKFFLSRFRKEKRMAYKKLLFMVLFISAVFLVNIVNIQGGSLAQPGDNTKINKQDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK*
Ga0115027_100057705	3300009131	Wetland	METTAEKFFLSRFRKEKRMAYKKLLFMVLFISAVFLVNIQGGSLAQPGDNTKINKQDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK*
Ga0115027_100650981	3300009131	Wetland	MANKILFFLVLFISAVSLVNIPGVSLAQPADNTKINKQDTSPKELTANQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE*
Ga0115027_114873582	3300009131	Wetland	MAYKKLLFTILFISAVFLVNIQGACLAQSGDNAKLTKQDTSPKEITVDQQVETKQDRKIRPVQGLRIVELSGNPARMVIKATDLNRKEPAPTVATDK*
Ga0105102_101935581	3300009165	Freshwater Sediment	MANKMLFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE*
Ga0105102_103658851	3300009165	Freshwater Sediment	SFRKEKRMAYKKLLFAVLFISAVFLVSIQGVGLAQLGDNTKINKQDTPPKELTVDQQVEIKQDRKIRPVQGLRILELSENPARTVTKATDLSRKEPAPTVATDK*
Ga0105100_100433921	3300009166	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKELSADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPP
Ga0113563_103430784	3300009167	Freshwater Wetlands	MILFISAVFLVNIPGACLAQPGDNTKINKQDTSPIDLTVDRQAETKQGRKIKNVQGLRILELRETPVQTMIKSTDLTRKGPSAPVATDE*
Ga0113563_138904041	3300009167	Freshwater Wetlands	MANKILPFIILFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPSPPVANNE*
Ga0105104_104792791	3300009168	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTKGLTLKEPSPPVANN*
Ga0105097_103054772	3300009169	Freshwater Sediment	METTAEKFFLSRFRKEKRMAYKKLLFMVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTVDQQVETKPDRKIRPVQGLRILELSENPARTVTKPTDLSRKEPAPTLATDK*
Ga0105097_103226732	3300009169	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQHADNTKINKQDTSSKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE*
Ga0105101_100829062	3300009171	Freshwater Sediment	METTAEKFFLSRFRKEKRMAYKKLLFMVLFISAVFLVNIQGACLAQPDDNTKINKQDTSKKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVIKATDLTRKEPAPTVATDK*
Ga0115028_100103776	3300009179	Wetland	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE*
Ga0115028_101226164	3300009179	Wetland	SAVFLVNIQGACLAQPYDNTKINKQDTSQIELTVDQQVETKQDRKIRPVQGLRILELSENPARTAIKATDLTRKEPAPTVATDK*
Ga0115028_106575152	3300009179	Wetland	MAYKKLFVMVLFMSAVFLVSIQGACWAQPNGNTKINKQDTSPKELAVGQQVETKQDRKIRPVQGLRILELNENPARAVIKATDHTRIEPGPTVATDK*
Ga0115592_11411961	3300009755	Wetland	METTAEKFSPSSFRKEKRMAYKKLLFMVLVISAVFIVNIQGACLAQPGDNTKINKQDTSPIDLTVDRQAETKQGRKIKNVQGLRILELRETPVQTMIKSTDLTRKGPSAPVATDE*
Ga0137450_10410151	3300011407	Soil	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGDTKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE*
Ga0137460_11158172	3300011408	Soil	MANKILFFLALFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE*
Ga0170573_112544901	3300013232	Sediment	MKSLQSNVRRILLANKILFFGVLFISAVSLVNIPGACLAQPADNSKINKQETSPKELTAGQQGETKQNRKIRSVQGLKILELRENPAQTVIITTGLTQKEPAPPVANNE*
Ga0173609_103423702	3300013315	Sediment	MKNLQSNVRRILLANKILFLGVLFISAVSLVNIPGACLAQPADNSKINKQETSPKELTAGQQGETKQNRKIRSVQGLKILELRENPAQTVIITTGLTQKEPAPPVANNE*
Ga0173609_108187072	3300013315	Sediment	MKSLQSNARRIPLANKILVFWVLFISAVALVNIPGACLAQPADNSKINKQESSPKELTADQQGETKQDRKIRSVQGLRILEVRENPAKTVIKTTGLTLKEPELPSGK*
Ga0075346_10754302	3300014306	Natural And Restored Wetlands	MKSIQFNVRRILLANKILFFGVLFISAVSLVNIPGLCFAQPADSAQINKRDTSPKELTADQQGETKQERKIRSVQGLKILELRENPARTVIKTTGLSLKEPAPPVAPNE*
Ga0079039_14002651	3300022185	Freshwater Wetlands	MANKTLLFLVLFISAVFFVNIPGACLAQPGDNTKINKQDTSPKELTVDQQVETKQDRKIRTVQGLRILERRERPAQTMMNATDP
Ga0124853_11104282	3300024056	Freshwater Wetlands	YKKLLFMVLFISAVFLVNIQGGSLAQPGDNTKINKQDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK
Ga0210133_11476931	3300025573	Natural And Restored Wetlands	ISAVSLVNIRGICLAQPADNTKINKQDTSPRELTSDQQGEKKQDRKIRSVQGLKILELRENPAQTVIITTGFTQKEPAPPLANNE
Ga0256814_10076531	3300026464	Sediment	MKSLKSNVRRILLANKILFLGILFISAVSLVNIPGLCFAQPADSAQFNKPDTSPKELTADQQGETKQERKIRSVQGLKILELRENPARTVIKTTGLSLKEPAPPVANNE
Ga0209392_11420661	3300027683	Freshwater Sediment	MANKMLFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK
Ga0208665_101403451	3300027715	Deep Subsurface	MANKILFFLVLFISAVSFVNIPGACLAQPADNTKINKQDTSPKGLTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE
Ga0209682_100659472	3300027716	Wetland Sediment	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKMTGLTLKEPASPVANNE
Ga0209492_12587371	3300027721	Freshwater Sediment	ILAFFRFLASHLLIRLIDEKHSIQRWENLMANKILFFLVLLISAVSLVNIPGACLAQHADNTKINKQDTSSKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE
Ga0209492_12606491	3300027721	Freshwater Sediment	RVIKTRSQILAFFRFLASHLLIRLIDEKHSIQRRENLMANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK
Ga0209703_10876582	3300027723	Freshwater Sediment	MAYKKLLFMVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTVDQQVETKPDRKIRPVQGLRILELSENPARTVTKATDLSRKEPAPTVATDK
Ga0209285_100367511	3300027726	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKELSADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK
Ga0209575_102002921	3300027739	Freshwater	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTEINTTGLTRKEPTPPMANKE
Ga0209288_100630181	3300027762	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK
Ga0209287_101788341	3300027792	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTKGLTLKEPSLPVANNE
Ga0209373_101586662	3300027796	Freshwater	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPEPPVANNE
Ga0209800_102835071	3300027800	Freshwater	WENLMANKILFFLVLLISAVSLVNIPGACLAQHADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE
Ga0209262_103587661	3300027841	Freshwater	MANKTLFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQERKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE
Ga0209397_104672152	3300027871	Wetland	MANKILFFLVLFILAVSLVNIPGACLAQSADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKE
Ga0209293_100087035	3300027877	Wetland	MAYKKLLFMVLFISAVFLVNIVNIQGGSLAQPGDNTKINKQDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK
Ga0209450_102578591	3300027885	Freshwater Lake Sediment	MAYKKLFVMVLFMLAVFLVSIQGACWAQPNGNTKIKKQDTSPKELTVDQQEETKQDRKIRPVQGLRILELNENPARAVIKATDHTRIEPGPTVATDK
Ga0209450_103599482	3300027885	Freshwater Lake Sediment	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTEINTTGLTREEPTPPMANKE
Ga0208980_100088411	3300027887	Wetland	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQAVIKTTGLTLKEPVSPVANNE
Ga0209496_100008064	3300027890	Wetland	MAYKKLLFMVLFISAVFLVNIQGGSLAQPGDNTKINKQDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK
Ga0209496_100383301	3300027890	Wetland	MANKTLFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE
Ga0209668_103370933	3300027899	Freshwater Lake Sediment	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE
Ga0209820_11209191	3300027956	Freshwater Sediment	NKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK
Ga0209079_102149042	3300027972	Freshwater Sediment	AFFRFLASHLLIRLIDEKHSIQRRENLMANKILFFLVLLISAVSLVNIPGACLAQPADNTKINKQDTSPKEFTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGPTLKEPAPPVANNK
Ga0209391_101453091	3300027975	Freshwater Sediment	MANKILPFMILFISSVFLVNIPGACLAQPGANTKINKQDTSPKDLAVDRQVETKQDRKIKNVQGLRILELRETPAQTMIKATDLTRKEPAALVAPEE
Ga0209391_101601832	3300027975	Freshwater Sediment	MANKILFFLVLLISAVSLVNIPGACLAQHADNTKINKQDTSSKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPAPPVANNE
Ga0316605_116897371	3300033408	Soil	MAYKKLFVMVLFMSAVFLVSIQGACWAQPNGNTKIKKQDTSPKELTVDQQEETKQDRKIRPVQGLRILELNENPARAVIKATDHTRIEPEPTVASDK
Ga0316605_119532572	3300033408	Soil	ANKILLFMVLFISAVFLVNIPGACLAQPADDTKINKRDISPKELTADQQGEAKQDRKIRNVQGLRILELRENSAQTMIKATDLTRKEPGLPLANDE
Ga0316605_119700512	3300033408	Soil	MANKILFFLVLFILAVSLVNIPGACLAQSADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVINTTGLTRKEPTPPMANKE
Ga0316603_104134311	3300033413	Soil	MAYKKLLFMVLFISAVFLVNIPGACLAQPADDTKINKRDISPKELTADQQGETKQDRKIRNVQGLRILELRENPAQTMIKATDLTRKEPGLPLANDE
Ga0316603_106105402	3300033413	Soil	MAYKKLFVMVLFMSAVFLVSIQGACWAQPNGNTKINKQDTSPKELAVGQQVETKQDRNIRPVQGLRILELNENPARAVIKATDHTRIEPGPTVATDK
Ga0316603_110508202	3300033413	Soil	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTSDQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE
Ga0316619_122006281	3300033414	Soil	MANKILFFLVLFILAVSLVNIPGACLAQPADKMKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVANNE
Ga0316622_1002653232	3300033416	Soil	MAYKKLLFMVLFISAVFLVNIQGGSLAQPGDNTKINKHDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK
Ga0316625_1004255722	3300033418	Soil	MAYKKLLFTVLFISAVFIVNIQGACLAQSGDNAKLTKQDTSPKEITVDQQVETKQDRKIRPVQGLRIVELSENPARMVIKATDLNRKEPAPTVATDK
Ga0316625_1010739021	3300033418	Soil	MAYKKLFVIILFMSTVFLVSIQGACWAQPNGNTKIDKQDTSPKELAVDQHVETKQDRKIRPVQGLRILGLNENPAKAAIKATDHTRINPGPTVATDE
Ga0316601_1009025201	3300033419	Soil	MANKILFFLVLFILAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE
Ga0316613_103398671	3300033434	Soil	MAYKKLLFMVLFISAVFLVNTQGACLAQPGDNTKINKQDISPKELVVDQQLETNQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK
Ga0316627_1001208211	3300033482	Soil	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE
Ga0316629_107129371	3300033483	Soil	SSYPDFERRNVWVLFISAVFLVNIQGGSLAQPGDNTKINKQDTSQKELTVDQQVETKQDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK
Ga0316626_100184795	3300033485	Soil	MAYKKLLFMVLFISAVFLVNIVNIQGGSLAQPGDNTKINKQDTPAKELTVDQQVEIKPDRKIRPVQGLRILELSENPARTVINATDLTRKEPAPTVATDK
Ga0316630_109271241	3300033487	Soil	NKILLFMVLFISAVFLVNIPGACLAQPADDTKINKRDISPKELTADQQGEAKQDRKIRNVQGLRILELRENPAQTMIKATDLTRKEPGLPLANDE
Ga0316621_112712892	3300033488	Soil	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIETKGLTLKEPAPPVAIKE
Ga0316621_114562891	3300033488	Soil	FLVNIPGACLAQPGDNTKINKQDTSPIDLTVDRQAETKQGRKIKNVQGLRILELRETPVQTMIKSTDLTRKGPSAPVATDE
Ga0316616_1032301191	3300033521	Soil	MANKILLFMVLFISAVFLVNIPGACLAQPADDTKINKRDISPKELTADQQGETKQDRKIRNVQGLRILELRENPAQTMIKATDLTRKEPGLPLANDE
Ga0316616_1034020382	3300033521	Soil	MAYKKILFTVLFISAVFLVNIQGACLAQSGDNAKLTKQDTSPKEITVDQQVETKQDRKIRPVQGLRIVELSENPAKMVIKATDLNRKEPTPTVATDK
Ga0316617_1009301251	3300033557	Soil	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLNLKEPAPPVANNE
Ga0316617_1020937751	3300033557	Soil	DEKHSIQRRENPMANKILFFLVLFILAVSLVNIPGACLAQPADKMKINKQDTSPKELTADQQGETKQDRKIRSVQGLKIVGLSEGPAQTVIKTKGLTLKEPAPPVAIKE
Ga0316617_1023199271	3300033557	Soil	MANKTLLFLVLFISAVFLVNIPGACLAQPGDNTEISKQDTSPKELTVDQQVETKQDRKIRTVQGLRILERRESPAQTMMKATDPTRKEPAASVATD
Ga0370490_0035096_924_1217	3300034128	Untreated Peat Soil	MANKIRFFLVLFILAVSLVNIPGLCLAQPADNTKINKQDTFPKELTADQQGETKQDRKIRSVQGLKIVGLSENPAQTVIKETGLTLKEPAPPVANNE
Ga0370480_0033091_1153_1446	3300034169	Untreated Peat Soil	MANKILFFLVLFISAVSLVNIPGACLAQPADNTKINKQDTSPKELTAGEQGETKQDRKIRSVQGLKIVGLSENPAQTVIKTTGLTLKEPSPPVANNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences