Metagenome Family F096253

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096253
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	79 residues
Representative Sequence	MTPASRHGVRGRWLVLGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRFR
Number of Associated Samples	60
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.76 %
% of genes near scaffold ends (potentially truncated)	31.43 %
% of genes from short scaffolds (< 2000 bps)	87.62 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (89.524 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (52.381 % of family members)
Environment Ontology (ENVO)	Unclassified (29.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.63% β-sheet: 0.00% Coil/Unstructured: 40.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF12642	TpcC	0.95
PF02467	Whib	0.95
PF12846	AAA_10	0.95
PF00877	NLPC_P60	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
All Organisms	root	All Organisms	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
cellular organisms	root	All Organisms → cellular organisms	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
unclassified Nakamurella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.52 %
Nakamurella sp. PAMC28650	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella → Nakamurella sp. PAMC28650	2.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001404\|JGI20181J14860_1001244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	3726	Open in IMG/M
3300001404\|JGI20181J14860_1003692	Not Available	1650	Open in IMG/M
3300001427\|JGI20200J14955_1002786	Not Available	2708	Open in IMG/M
3300001427\|JGI20200J14955_1012984	Not Available	813	Open in IMG/M
3300001429\|JGI20202J14951_1001841	Not Available	3067	Open in IMG/M
3300006354\|Ga0075021_10514528	Not Available	759	Open in IMG/M
3300006354\|Ga0075021_11061779	Not Available	529	Open in IMG/M
3300006642\|Ga0075521_10026938	Not Available	2389	Open in IMG/M
3300006642\|Ga0075521_10040426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2001	Open in IMG/M
3300006642\|Ga0075521_10055113	Not Available	1745	Open in IMG/M
3300006642\|Ga0075521_10234574	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300006642\|Ga0075521_10545401	Not Available	569	Open in IMG/M
3300006642\|Ga0075521_10613952	Not Available	535	Open in IMG/M
3300006795\|Ga0075520_1041827	Not Available	2234	Open in IMG/M
3300006795\|Ga0075520_1088233	Not Available	1424	Open in IMG/M
3300006795\|Ga0075520_1204812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300009148\|Ga0105243_10502595	Not Available	1149	Open in IMG/M
3300009176\|Ga0105242_10588537	Not Available	1073	Open in IMG/M
3300009551\|Ga0105238_11578691	Not Available	686	Open in IMG/M
3300012958\|Ga0164299_10250865	Not Available	1058	Open in IMG/M
3300012985\|Ga0164308_11825110	Not Available	567	Open in IMG/M
3300012986\|Ga0164304_11688965	Not Available	529	Open in IMG/M
3300012987\|Ga0164307_10424575	Not Available	986	Open in IMG/M
3300012988\|Ga0164306_11170305	Not Available	643	Open in IMG/M
3300012988\|Ga0164306_11860995	Not Available	523	Open in IMG/M
3300012989\|Ga0164305_10692614	Not Available	832	Open in IMG/M
3300014498\|Ga0182019_10429593	Not Available	905	Open in IMG/M
3300014502\|Ga0182021_11331841	Not Available	865	Open in IMG/M
3300018481\|Ga0190271_12281128	Not Available	646	Open in IMG/M
3300018920\|Ga0190273_11125435	Not Available	661	Open in IMG/M
3300025386\|Ga0208585_1015945	Not Available	845	Open in IMG/M
3300025427\|Ga0208077_1005048	Not Available	1878	Open in IMG/M
3300025443\|Ga0208081_1000342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella → Nakamurella sp. PAMC28650	11568	Open in IMG/M
3300025443\|Ga0208081_1022957	Not Available	1129	Open in IMG/M
3300025443\|Ga0208081_1025239	Not Available	1065	Open in IMG/M
3300025461\|Ga0208851_1007092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	2531	Open in IMG/M
3300025474\|Ga0208479_1021701	Not Available	1357	Open in IMG/M
3300025475\|Ga0208478_1002055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella → Nakamurella sp. PAMC28650	5471	Open in IMG/M
3300025475\|Ga0208478_1016604	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300025475\|Ga0208478_1095361	Not Available	524	Open in IMG/M
3300025479\|Ga0208588_1009658	Not Available	2296	Open in IMG/M
3300025479\|Ga0208588_1041302	Not Available	940	Open in IMG/M
3300025527\|Ga0208714_1031874	Not Available	1224	Open in IMG/M
3300025857\|Ga0209014_10159594	Not Available	817	Open in IMG/M
3300025878\|Ga0209584_10001024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8917	Open in IMG/M
3300025878\|Ga0209584_10115333	Not Available	998	Open in IMG/M
3300025878\|Ga0209584_10343799	Not Available	575	Open in IMG/M
3300025935\|Ga0207709_10763330	Not Available	778	Open in IMG/M
3300028596\|Ga0247821_10582223	Not Available	720	Open in IMG/M
3300028597\|Ga0247820_11423418	Not Available	506	Open in IMG/M
3300028649\|Ga0302162_10173019	Not Available	529	Open in IMG/M
3300028651\|Ga0302171_10080885	Not Available	781	Open in IMG/M
3300028732\|Ga0302264_1021662	Not Available	1479	Open in IMG/M
3300028732\|Ga0302264_1114170	Not Available	647	Open in IMG/M
3300028741\|Ga0302256_10015356	Not Available	1840	Open in IMG/M
3300028741\|Ga0302256_10079341	Not Available	857	Open in IMG/M
3300028743\|Ga0302262_10251622	Not Available	601	Open in IMG/M
3300028856\|Ga0302295_1134097	Not Available	564	Open in IMG/M
3300028861\|Ga0302259_1054301	Not Available	949	Open in IMG/M
3300028865\|Ga0302291_10171392	Not Available	737	Open in IMG/M
3300028870\|Ga0302254_10085024	Not Available	1151	Open in IMG/M
3300028870\|Ga0302254_10160156	Not Available	827	Open in IMG/M
3300028870\|Ga0302254_10172058	Not Available	796	Open in IMG/M
3300028870\|Ga0302254_10338023	Not Available	557	Open in IMG/M
3300029980\|Ga0302298_10131289	Not Available	800	Open in IMG/M
3300029980\|Ga0302298_10190470	Not Available	669	Open in IMG/M
3300029980\|Ga0302298_10285332	Not Available	549	Open in IMG/M
3300029984\|Ga0311332_10022830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella → Nakamurella sp. PAMC28650	4210	Open in IMG/M
3300029984\|Ga0311332_10481506	Not Available	972	Open in IMG/M
3300029984\|Ga0311332_10566240	Not Available	896	Open in IMG/M
3300029987\|Ga0311334_10148213	Not Available	1767	Open in IMG/M
3300029989\|Ga0311365_11129214	Not Available	676	Open in IMG/M
3300029989\|Ga0311365_11466484	Not Available	586	Open in IMG/M
3300029990\|Ga0311336_10096305	Not Available	2339	Open in IMG/M
3300029990\|Ga0311336_10225100	Not Available	1535	Open in IMG/M
3300029990\|Ga0311336_11072833	Not Available	701	Open in IMG/M
3300030000\|Ga0311337_10504401	Not Available	1034	Open in IMG/M
3300030000\|Ga0311337_10693942	Not Available	880	Open in IMG/M
3300030002\|Ga0311350_10309094	Not Available	1412	Open in IMG/M
3300030002\|Ga0311350_10704873	Not Available	906	Open in IMG/M
3300030010\|Ga0302299_10098151	Not Available	1613	Open in IMG/M
3300030019\|Ga0311348_10759175	Not Available	723	Open in IMG/M
3300030019\|Ga0311348_10858196	Not Available	676	Open in IMG/M
3300030052\|Ga0302217_10183118	Not Available	504	Open in IMG/M
3300030114\|Ga0311333_10393304	Not Available	1120	Open in IMG/M
3300030114\|Ga0311333_11265061	Not Available	632	Open in IMG/M
3300030114\|Ga0311333_11856504	Not Available	524	Open in IMG/M
3300030114\|Ga0311333_11890693	Not Available	520	Open in IMG/M
3300030294\|Ga0311349_10749370	Not Available	920	Open in IMG/M
3300030294\|Ga0311349_11577387	Not Available	608	Open in IMG/M
3300030294\|Ga0311349_12020805	Not Available	530	Open in IMG/M
3300030491\|Ga0302211_10201846	Not Available	587	Open in IMG/M
3300030838\|Ga0311335_10145377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1559	Open in IMG/M
3300030838\|Ga0311335_10583123	Not Available	781	Open in IMG/M
3300030943\|Ga0311366_10471632	Not Available	1092	Open in IMG/M
3300030943\|Ga0311366_10471787	Not Available	1092	Open in IMG/M
3300031232\|Ga0302323_100259747	Not Available	1784	Open in IMG/M
3300031232\|Ga0302323_101853437	Not Available	683	Open in IMG/M
3300031722\|Ga0311351_10991463	Not Available	643	Open in IMG/M
3300031722\|Ga0311351_11203405	Not Available	582	Open in IMG/M
3300031902\|Ga0302322_100884143	Not Available	1071	Open in IMG/M
3300031902\|Ga0302322_102937451	Not Available	587	Open in IMG/M
3300031918\|Ga0311367_10679610	Not Available	1047	Open in IMG/M
3300031918\|Ga0311367_10718380	Not Available	1014	Open in IMG/M
3300031918\|Ga0311367_11581832	Not Available	641	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.19%
Host-Associated	Host-Associated	3.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Plants	Host-Associated → Plants	3.81%
Aquatic	Environmental → Aquatic	1.90%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	52.38%
Soil	Environmental → Terrestrial → Soil	41.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.81%
Sediment	Environmental → Aquatic → Sediment	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	52.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	52.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	29.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.90%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	52.38%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	29.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001404	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012	Environmental	Open in IMG/M
3300001427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012	Environmental	Open in IMG/M
3300001429	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300025386	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025479	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030052	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20181J14860_10012444	3300001404	Arctic Peat Soil	MTPTSRHGVRGRWLVLVVILWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR*
JGI20181J14860_10036921	3300001404	Arctic Peat Soil	MTPASRHGVRGRWLVLGVILWLILASSITLEQGQESAAQWGSAATLAVLGILALLAACRVALIPVRGLVRRVRRWVAGRFR*
JGI20200J14955_10027862	3300001427	Arctic Peat Soil	MTPASRHGVRGRWLVLGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRLRRWVAGRFR*
JGI20200J14955_10129841	3300001427	Arctic Peat Soil	MTPTSRHGVRGRRLVLGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRAALIPVRGIGRRVRRWAAGRIR*
JGI20202J14951_10018414	3300001429	Arctic Peat Soil	MTPASRHGVRGRWLVLGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWVAGRFR*
Ga0075021_105145282	3300006354	Watersheds	MITPSTRQRIRGRWVLGVILWLVLASSITLEQGQETAARWGSAATLTVIGLVALLLVGRVAVIPLRAAGRRARRWATGRFR*
Ga0075021_110617792	3300006354	Watersheds	MTPPPRQRIRGRWLILGVIGWLILASSITLEQGQATAAEWGSATAVALIGLLILLAVGRVALIPMRAAYRSVCRWAVGRFR*
Ga0075521_100269382	3300006642	Arctic Peat Soil	MTPASRHGVRGRWLVAGVILWLILASSISLEQGQESAAQWGSAATLAVIGILVLLAVCRVALIPVRGIVRRVRRWAAGRFR*
Ga0075521_100404262	3300006642	Arctic Peat Soil	MTPPSRQGVRGRWVVLGVILWLILWLILASSITLEQGNPRHSGGSAATLAVIGILVLLAVCRVALIPLRGIGRRVSRWAAGRYR*
Ga0075521_100551133	3300006642	Arctic Peat Soil	MTPAPRHGVRGRWLVLGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRARRWVAGRFR*
Ga0075521_102345742	3300006642	Arctic Peat Soil	MTPASRHGVRGRWLVLGVILWLILASSIALEQGQESAAQWGSAATLAVLGILVVLAVCRAALIPLRGIGRRVRRWAAGRFR*
Ga0075521_105454012	3300006642	Arctic Peat Soil	MTTPRPRQRIRGRWVVLGVILWLTLASSITLELGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGTVRRVRRWAVGRFR*
Ga0075521_106139522	3300006642	Arctic Peat Soil	MTPTRRHGVRGRRWLVLVVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGIGRPVRRWVAGRFR*
Ga0075520_10418273	3300006795	Arctic Peat Soil	MTPAPRHGVRGRWLVLGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRLR*
Ga0075520_10882332	3300006795	Arctic Peat Soil	MTPASRHGVRGRWLVLGVILWLTLASSITLEQGQESAAHWGSAATLAVLGILVLLAVCRVALIPVRGLVRRARRWVAGRFR*
Ga0075520_12048122	3300006795	Arctic Peat Soil	MTPASRHGVRGRWLILGVILWLILASSITLEQGQESAAQWGSAATLAVIGILVVLAVCRAALIPLRGIGRRVRRWAAGRFR*
Ga0105243_105025952	3300009148	Miscanthus Rhizosphere	MTTPRPGQRIRGRWVVLGVILWLILASSITLELGQETAAQWGSAAALIVICLLALSAAGRVAMIPLRAIGRRVCRWAAGRIK*
Ga0105242_105885372	3300009176	Miscanthus Rhizosphere	MTTPRPGQRIRGRWVVLGVIVWLILASSITLELGQETAAQWGSAAALIVICLLALSAAGRVAMIPLRAIGRRVCRWAAGRIK*
Ga0105238_115786912	3300009551	Corn Rhizosphere	MTTPRPGQRIRGRWAVLGVILWLILASSITLEQGQETAAQWGSAAALIVIGLVALLAVGRVAWIPLWAIGRRVRRRAARRFR*
Ga0164299_102508652	3300012958	Soil	VVLGVIVWLLLASSITLELGQETAAQWGSAAALIVICLLALSAAGRVAMIPLRAIGRRVCRWAAGRIK*
Ga0164308_118251102	3300012985	Soil	MITPRARQRIRGRWVLGVILWLVLASSITLEQGQETAAAWGSAATLTVIGLVALLLVGRVAVIPMRAAGRRAHRWATGRFR*
Ga0164304_116889651	3300012986	Soil	MTTPRPGQRIRGRWVVLGVILWLILASSITLELGQETAAQWGSAAALIVICLLALSAAGRVAMIPLRAIGRRVCRWAAG
Ga0164307_104245752	3300012987	Soil	MTTPRPGQRIRGRWVVLGVILWLILASSITLELGQETAAQWGSAAALIVICLLALSAAGRVAMIPLRAIGRRVCRWTAGRIK*
Ga0164306_111703052	3300012988	Soil	VVLGVILWLILASSITLEMGQETAAQWGSAAALIVICLLALSSVGRVGLIPVRAIGRRVCRRVDRRFR*
Ga0164306_118609952	3300012988	Soil	VVLGVIVWLILASSITLELGQETAAQWGSAAALVVVGLVGLLAVGRVALLPLRAIGRRIRRRTNRWIK*
Ga0164305_106926142	3300012989	Soil	MTTPRPTQRIRGRWVVLGVILWLILASSITLELGQETAAQWGSAAALIVICLLALSAAGRVAMIPLRAIGRRVCRWAAGRIK*
Ga0182019_104295932	3300014498	Fen	MTPPSRHGVRGRGLVLGVILWLILASSITLEAGQESAAQWGTAATLAVIGILVLLAVCRVALIPVRGIVRRVRRRAAGRFR*
Ga0182021_113318412	3300014502	Fen	MTRTSRHGVRGRWLILGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWVAGRFR*
Ga0190271_122811282	3300018481	Soil	MTPPVRQTIRGHWVILGIIGWLILASSIALEEGQETAAKWGSTVTLAFIGLLILLAAGRVALIPVRAACRRVCRWAVGRFR
Ga0190273_111254351	3300018920	Soil	MTPPTSHKARGRWVVIGVVVWLILASSISLEQGRDAAAEWGSAATLVVLGLLVLLAVGRVALIPLRAAGCRVRRWAVRRLR
Ga0208585_10159452	3300025386	Arctic Peat Soil	MTPASRPGVRRSWLILGVIILWLILASSITLEQGQESAAQWGSAATLAVLGILALLAVCRVALIPVRGIGRRVRRRAAGRFR
Ga0208077_10050483	3300025427	Arctic Peat Soil	MTPASRHGVRGRWLVLGVILWLILASSITLEQGQESAAQWGSAATLAVLGILALLAVCRVALIPVRGLVRRVRRWAVGRFR
Ga0208081_100034212	3300025443	Arctic Peat Soil	MTPTSRHGVRGRWLVLVVILWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0208081_10229571	3300025443	Arctic Peat Soil	MTPASRHGVRGRWLVAGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWVAGRFR
Ga0208081_10252393	3300025443	Arctic Peat Soil	MTTPRPRQRIRGRWVVLGVILWLTLASSITLELGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGTVRRVRRWAVGRFR
Ga0208851_10070922	3300025461	Arctic Peat Soil	MTPTSRHGVRGRRLVLGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRAALIPVRGIGRRVRRWAAGRIR
Ga0208479_10217012	3300025474	Arctic Peat Soil	MTPTSRHGVRGRWLVLGVIIWLILASSITLEAGQESAAQWGSAAALAVIGILGLLAVCRVALIPVRGIGRRVRRRAAGRFR
Ga0208478_10020555	3300025475	Arctic Peat Soil	MTPASRHGVRGRWLVLGVILWLILASSITLEQGQESAARWGSAAALAVIGIVVLLAVCRAALIPVRGIGRRVRHWAGRFQ
Ga0208478_10166041	3300025475	Arctic Peat Soil	GVRGRWLVLGVILWLILASSITLEQGQESAAQWGSAATLAVLGILALLAACRVALIPVRGLVRRVRRWVAGRFR
Ga0208478_10953612	3300025475	Arctic Peat Soil	MTPTSRHGVRGRWLVAGVVLWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLTVCRVALIPVRGLVRRVRRRVAGRFR
Ga0208588_10096584	3300025479	Arctic Peat Soil	MTPASRHGVRGRWLVAGVVLWLILASSITLEQGQDSAAQWGSAATLAVIGILVLLAVCRVALITVRGLVRRVRRWVAGRFR
Ga0208588_10413022	3300025479	Arctic Peat Soil	MTPASRHGVRGRWLVLGVVLWLILASSISLEQGQESAAQWGSAATLTVLGILVLLTVCRVALIPVRGLVRRVRRRVAGRFR
Ga0208714_10318742	3300025527	Arctic Peat Soil	MTPTSRHGVRGRWLVAGVVLWLTLASSITLEQGQESAARWGSAATLAVIGILVLLAVCRVALIPVRGIGRRVSRWAAGRVR
Ga0209014_101595942	3300025857	Arctic Peat Soil	MTPTSRRGVRGCWLVLGVIIWLILASSITLEAGQESAAQWGSAAALVIGILGLLAVCRVALIPVRGIVRRVRRWAAGRFR
Ga0209584_100010243	3300025878	Arctic Peat Soil	MTPAPRHGVRGRWLVLGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRARRWVAGRFR
Ga0209584_101153331	3300025878	Arctic Peat Soil	MTPTSRHGVRGRWLVLGVILWLILASSITLEAGQESAAQWGSAATLAVIGILVLLAVCRVALIPVRGIGRRVRRWAAGRFR
Ga0209584_103437992	3300025878	Arctic Peat Soil	MTPPSRQGVRGRWVVLGVILWLILASSITLEQGQESAAKWGSAATLAVIGILVLLAVCRVALIPLRGIGRRVSRWAAGRYR
Ga0207709_107633302	3300025935	Miscanthus Rhizosphere	MTTPRPGQRIRGRWVVLGVILWLILASSITLELGQETAAQWGSAAALIVICLLALSAAGRVAMIPLRAIGRRVCRWAAGRIK
Ga0247821_105822231	3300028596	Soil	MTLPKSQRVRGRWVVVGVVVWLILASSISLEQGQDAVAEWGSAATLVVLGLLVLLAVGRVALIPLRAAGARVRCWAL
Ga0247820_114234182	3300028597	Soil	MTAPRPGQRIRLLLGFITWLILASSIALEQGQETAARWGSAAALGVIGLLTLFAVGGVAVIPLRAAGRFR
Ga0302162_101730192	3300028649	Fen	ATDPPMTPPSRHGVRGRWLVAGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILALLAVCRVALIPVRGLIRRVRRWAAGRIR
Ga0302171_100808851	3300028651	Fen	MTPASHHGVRGRRRWLVLGVVLWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWA
Ga0302264_10216623	3300028732	Fen	MTPMSRPGVRGRWLVLGGILWLILASSITLEQGQESAAQWGSAATLVVLGVLVLLAVCRVALIPVRGLVRRLRRWVAGRLR
Ga0302264_11141702	3300028732	Fen	MTPASHHGVRGRRRWLVLGVVLWLTLASSITLEQGQESAAQWGSAATLAFIGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0302256_100153563	3300028741	Fen	MTPTSRHGVRGRWLLLGVIIWLILASSITLEQGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGRRVRRWAAGRFR
Ga0302256_100793411	3300028741	Fen	MTPASRHGVRGRWLVLGVVLWLILASSISLEQGQESAAQWGSAATLAVLGILALLAVCRVALIPVRGLIRRVRRWAAGR
Ga0302262_102516222	3300028743	Fen	MTPASRHGVRGRWLVLGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILALLAVCRVALIPVRGLVRRVRRWAAGRFR
Ga0302295_11340972	3300028856	Fen	RVRGRWLVLGVVLWLTLASSITLEQGQESVAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWVAGRFR
Ga0302259_10543012	3300028861	Fen	AGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0302291_101713921	3300028865	Fen	MTPASRHGVRGRWLVLGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRFR
Ga0302254_100850241	3300028870	Fen	MTPTSRHGVRGRWLLLGVIIWLILASSITLEQGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGRRVRRWAAGRF
Ga0302254_101601562	3300028870	Fen	GRGLVLGVIIWLILASSITLEQGQESAARWGAAAALAVIGILVLLAVCRVALIPVRGIVRRVRCWAAGRFR
Ga0302254_101720582	3300028870	Fen	MTPASRHGVRGRWLVLGVVLWLILASSISLEQGQESAAQWGSAATLTVLGILVLLTVCRVALIPVRGLVRRVRRRVAGR
Ga0302254_103380231	3300028870	Fen	MTPTSRHGVRGRWLVAGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRPVRRWAAGRIR
Ga0302298_101312892	3300029980	Fen	MTPMSRPGVRGRWLVLGGILWLILASSITLEQGQESAAQWGSAATLVVLGVLVLLAVCRVALIPVRGLVRRLSRWVAGRLR
Ga0302298_101904702	3300029980	Fen	MTPTSRHGVRGRGLVLGVILWLILASSITLEAGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGRRVRRWAAGRFR
Ga0302298_102853321	3300029980	Fen	WVVLGVILWLTLASSITLELGQESAAQWGSAAALAVLGILVLLAVCRVALIPVRGTVRRVRRWAVGRFR
Ga0311332_100228301	3300029984	Fen	MTPTSRHGVRGRWLLLGVIIWLILASSITLEQGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGRRVRRWAAG
Ga0311332_104815062	3300029984	Fen	MTPASRHGVRGRWLVLGVVLWLTLASSIALEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLIRRVRRWVAGRFR
Ga0311332_105662402	3300029984	Fen	MTPTSRHGVRGRGLVLGVIIWLILASSITLEQGQESAARWGAAAALAVIGILVLLAVCRVALIPVRGIVRRVRCWAAGRFR
Ga0311334_101482133	3300029987	Fen	MTPPSRQGVRGRWVVLGVILWLILASSITLEQGQESAAQWGSAATLVVIGILVLLAVCRVALIPLRGIGRRVSRWAAGRYR
Ga0311365_111292142	3300029989	Fen	MTPPSRHGVRGRWLVAGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0311365_114664841	3300029989	Fen	AGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAAGRVALIPVRGLVRRVRRWAAGRFR
Ga0311336_100963054	3300029990	Fen	MTPTSRHGVRGRWLVLVVILWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAGGRVR
Ga0311336_102251002	3300029990	Fen	MTTPRPRQRIRGLWVVLGVILWLTLASSITLELGQESAAQWGSAAALAVLGILVLLAVCRVALIPVRGTVRRVRRWAVGRFR
Ga0311336_110728331	3300029990	Fen	MTRTSRHGVRGRWLILGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILALLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0311337_105044011	3300030000	Fen	PDAPGLHPATDPPMTPPSRHGVRGRWLVAGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0311337_106939422	3300030000	Fen	MTPPSRQGVRGRWVVLGVILWLILASSITLEQGQESAAQWGSAATLAVIGILVLLAVCRVALIPLRGIG
Ga0311350_103090942	3300030002	Fen	MTPPSRQGVRGRWVVLGVILWLILASSITLEQGQESAAQWGSAATLAVIGILVLLAVCRVALIPLRGIGRRVSRWAAERYR
Ga0311350_107048731	3300030002	Fen	WLVAGVILWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0302299_100981512	3300030010	Fen	MTPTSRHGVRGRWLLLGVIIWLILASSITLEQGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGRRVRCWAAGRFR
Ga0311348_107591751	3300030019	Fen	MTPPSRQGVRGRWVVLGVILWLILASSITLEQGQESAAQWGSAATLAVIGILVLLAVCRVALIPLRGIGRRVSRWAAE
Ga0311348_108581962	3300030019	Fen	MTPASRHGVRGRWLVAGVILWLILASSISLEQGQESAAQWGSAATLAVIGILVLLAVCRVALIPVRGLVRRVRRWVAGRFR
Ga0302217_101831181	3300030052	Fen	HGVRGRWLVAGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRRVAGRFR
Ga0311333_103933041	3300030114	Fen	RMTPTSRHGVRGRGLVLGVIIWLILASSITVEQGQESAARWGAAAALAVIGILVLLAVCRVALIPVRGIVRRVRCWAAGRFR
Ga0311333_112650612	3300030114	Fen	MTPASRHGVRGRWLVLGVVLWLILASSIALEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLIRRVRRRAAERIR
Ga0311333_118565041	3300030114	Fen	MTPTSRHGVRGRGLVLGVILWLILASSITLEAGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGR
Ga0311333_118906931	3300030114	Fen	TPASQHGVRGRWLVAGVILWLILASSISLEQGQESAAQWGSAATLAVIGILVVLAVCRAALIPLRGIGRRVRRWAAGRFR
Ga0311349_107493701	3300030294	Fen	MTPASRHGVRGRWLVAGVILWLILASSISLEQGQESAAQWGSAATLAVIGILVLLAVCRVALIPVRGIVRRVRRWAAGRFR
Ga0311349_115773872	3300030294	Fen	MTPASRHGVRGRRLVLGVVLWLTLASSIALEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLIRRVRRWVAGRFR
Ga0311349_120208052	3300030294	Fen	CHRFPDAPGVRPATAPPMTPASRHGVRGRWLVLGGILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRAALIPVRGLVRRVRRWAAGRIR
Ga0302211_102018461	3300030491	Fen	WVRGRWLVAGVILWLTLASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0311335_101453771	3300030838	Fen	LLLGVIIWLILASSITLEQGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGRRVRRWAAGRFR
Ga0311335_105831232	3300030838	Fen	RCHRLPDAPGLRPATHSRMTRTSRHGVRGRWLILGVVLWLILASSITLEQGQESAAQWGSAATLAVLGILALLAVCRVALIPVRGLVRRVRRWAAVRIR
Ga0311366_104716321	3300030943	Fen	TTDPRMTPPSRQGVRGRWVVLGVILWLILASSITLEQGQESAAQWGSAATLAVIGILVLLAVCRVALIPLRGIGRRVSRWAAGRYR
Ga0311366_104717871	3300030943	Fen	PMIVASRPGVRGRWLVLGVVLWLTLASSISLEQGQESAAQWGSAATLTVLGILVLLTVCRVALIPVRGLVRRVRRRVAGRFR
Ga0302323_1002597473	3300031232	Fen	MTTPRPRQRIRGLWVVLGVILWLTLASSITLELGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGTVRRVRRWAVGRFR
Ga0302323_1018534371	3300031232	Fen	RGRWLVAGVILWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0311351_109914632	3300031722	Fen	RWLVLVVILWLILASSITLEQGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAAGRIR
Ga0311351_112034052	3300031722	Fen	MTPTSRHGVRGRWLLLGVIIWLILASSITLEQGQESAAQWGSAAALAVIGILGLLAVCRVALIPVRGIVRRVRRWAAGRFR
Ga0302322_1008841432	3300031902	Fen	MTTPRPRQRIRGRWVVLGVILWLTLASSITLELGQESAAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWAVGRFR
Ga0302322_1029374511	3300031902	Fen	ATAPPMTPASRHGVRGRWLVLGVVLWLTLACSITLEQGQESAAQWGSAATLAVLGILVLLEVGRVALIPVRGLVRRVRRWAAGRSR
Ga0311367_106796101	3300031918	Fen	VLGVVLWLTLASSITLEQGQESVAQWGSAATLAVLGILVLLAVCRVALIPVRGLVRRVRRWVAGRFR
Ga0311367_107183802	3300031918	Fen	MTPTSRHGVRGRWLLLWVIIWLILASSITLEQGQESAAQWGSAAALAVIGILVLLAVCRVALIPVRGIGRRVRRWAAGRFR
Ga0311367_115818322	3300031918	Fen	RIRGLWVVLGVILWLTLASSITLELGQESAAQWGSAAALAVLGILVLLAVCRVALIPVRGTVRRVRRWAVGRFR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096253

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences