Metagenome / Metatranscriptome Family F096122

Basic Information
Family ID	F096122
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	59 residues
Representative Sequence	VEPIFEAVLANDPSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLHLAAAGLR
Number of Associated Samples	99
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.952 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.75% β-sheet: 0.00% Coil/Unstructured: 61.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00174	Oxidored_molyb	9.52
PF02909	TetR_C_1	5.71
PF00023	Ank	2.86
PF00196	GerE	1.90
PF00296	Bac_luciferase	1.90
PF09957	VapB_antitoxin	0.95
PF08240	ADH_N	0.95
PF02720	DUF222	0.95
PF02566	OsmC	0.95
PF04655	APH_6_hur	0.95
PF04551	GcpE	0.95
PF12706	Lactamase_B_2	0.95
PF01565	FAD_binding_4	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	9.52
COG3915	Uncharacterized conserved protein	Function unknown [S]	9.52
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	5.71
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.90
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	0.95
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.95
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.95
COG3570	Streptomycin 6-kinase	Defense mechanisms [V]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.62 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.67 %
Unclassified	root	N/A	42.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.43 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.90 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.95 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.95 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.90 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.95 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.95 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.95 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
unclassified Saccharothrix	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → unclassified Saccharothrix	0.95 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.95 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Saccharothrix sp. CB00851	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → unclassified Saccharothrix → Saccharothrix sp. CB00851	0.95 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.95 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_108839995	Not Available	525	Open in IMG/M
3300004091\|Ga0062387_100452628	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300005146\|Ga0066817_1015441	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005177\|Ga0066690_10569659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300005179\|Ga0066684_10512224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300005330\|Ga0070690_100017810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4281	Open in IMG/M
3300005344\|Ga0070661_101654891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	542	Open in IMG/M
3300005355\|Ga0070671_100724255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300005363\|Ga0008090_15298384	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005436\|Ga0070713_100510979	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005458\|Ga0070681_10476685	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300005467\|Ga0070706_101236120	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005468\|Ga0070707_100485407	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300005530\|Ga0070679_101985547	Not Available	531	Open in IMG/M
3300005536\|Ga0070697_101734235	Not Available	559	Open in IMG/M
3300005546\|Ga0070696_101294364	Not Available	619	Open in IMG/M
3300005615\|Ga0070702_101657533	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_104057182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300006163\|Ga0070715_10311791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300006175\|Ga0070712_100799305	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006175\|Ga0070712_101877392	Not Available	525	Open in IMG/M
3300006606\|Ga0074062_12625031	Not Available	506	Open in IMG/M
3300007076\|Ga0075435_101548042	Not Available	581	Open in IMG/M
3300007788\|Ga0099795_10398837	Not Available	625	Open in IMG/M
3300009137\|Ga0066709_103361388	Not Available	581	Open in IMG/M
3300009147\|Ga0114129_12123319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300009148\|Ga0105243_12647213	Not Available	542	Open in IMG/M
3300010373\|Ga0134128_11106096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300010373\|Ga0134128_12647903	Not Available	553	Open in IMG/M
3300010876\|Ga0126361_10491966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300012208\|Ga0137376_11432113	Not Available	582	Open in IMG/M
3300012209\|Ga0137379_10725606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → unclassified Saccharothrix → Saccharothrix sp. CB00851	899	Open in IMG/M
3300012210\|Ga0137378_11631025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	553	Open in IMG/M
3300012285\|Ga0137370_10370870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300012361\|Ga0137360_11800949	Not Available	518	Open in IMG/M
3300012473\|Ga0157340_1001942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300012492\|Ga0157335_1029276	Not Available	569	Open in IMG/M
3300012493\|Ga0157355_1018051	Not Available	629	Open in IMG/M
3300012494\|Ga0157341_1017211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300012882\|Ga0157304_1058107	Not Available	614	Open in IMG/M
3300012929\|Ga0137404_10468473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300012951\|Ga0164300_10034080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1896	Open in IMG/M
3300012960\|Ga0164301_10546498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	845	Open in IMG/M
3300013105\|Ga0157369_11815978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300013296\|Ga0157374_12182705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300015374\|Ga0132255_100131991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3453	Open in IMG/M
3300016319\|Ga0182033_10877806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300016341\|Ga0182035_11195835	Not Available	679	Open in IMG/M
3300017946\|Ga0187879_10383658	Not Available	779	Open in IMG/M
3300018060\|Ga0187765_11235345	Not Available	526	Open in IMG/M
3300018433\|Ga0066667_10559086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300019362\|Ga0173479_10611767	Not Available	572	Open in IMG/M
3300019885\|Ga0193747_1154275	Not Available	520	Open in IMG/M
3300019890\|Ga0193728_1328215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300020582\|Ga0210395_10926634	Not Available	647	Open in IMG/M
3300021362\|Ga0213882_10368533	Not Available	605	Open in IMG/M
3300021402\|Ga0210385_10603717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300021478\|Ga0210402_11338563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300024222\|Ga0247691_1065117	Not Available	550	Open in IMG/M
3300024279\|Ga0247692_1032114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300024331\|Ga0247668_1071527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300025903\|Ga0207680_10361764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300025905\|Ga0207685_10245831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300025921\|Ga0207652_10375333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1284	Open in IMG/M
3300025921\|Ga0207652_10906193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300025929\|Ga0207664_11170841	Not Available	686	Open in IMG/M
3300025929\|Ga0207664_11511096	Not Available	593	Open in IMG/M
3300025934\|Ga0207686_10210160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1398	Open in IMG/M
3300026078\|Ga0207702_10337346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300026886\|Ga0207982_1003346	Not Available	736	Open in IMG/M
3300027050\|Ga0209325_1021430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300027058\|Ga0209111_1037161	Not Available	616	Open in IMG/M
3300027517\|Ga0209113_1007311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1337	Open in IMG/M
3300028721\|Ga0307315_10150771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300028880\|Ga0307300_10079674	Not Available	965	Open in IMG/M
3300031545\|Ga0318541_10120725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300031572\|Ga0318515_10354546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	786	Open in IMG/M
3300031680\|Ga0318574_10493517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	717	Open in IMG/M
3300031764\|Ga0318535_10152264	Not Available	1030	Open in IMG/M
3300031768\|Ga0318509_10243431	Not Available	1004	Open in IMG/M
3300031778\|Ga0318498_10163245	Not Available	1013	Open in IMG/M
3300031835\|Ga0318517_10358676	Not Available	659	Open in IMG/M
3300031879\|Ga0306919_11236323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300031894\|Ga0318522_10200082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300031897\|Ga0318520_10778264	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031902\|Ga0302322_103417638	Not Available	544	Open in IMG/M
3300031908\|Ga0310900_11738522	Not Available	530	Open in IMG/M
3300031910\|Ga0306923_10138066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2777	Open in IMG/M
3300032035\|Ga0310911_10302228	Not Available	921	Open in IMG/M
3300032063\|Ga0318504_10189173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300032065\|Ga0318513_10034854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2195	Open in IMG/M
3300032068\|Ga0318553_10085081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1597	Open in IMG/M
3300032089\|Ga0318525_10440747	Not Available	667	Open in IMG/M
3300032090\|Ga0318518_10413986	Not Available	691	Open in IMG/M
3300032174\|Ga0307470_11257817	Not Available	604	Open in IMG/M
3300032174\|Ga0307470_11789574	Not Available	520	Open in IMG/M
3300032515\|Ga0348332_12371616	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300032770\|Ga0335085_10006998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17632	Open in IMG/M
3300032770\|Ga0335085_12131276	Not Available	565	Open in IMG/M
3300032805\|Ga0335078_12055497	Not Available	609	Open in IMG/M
3300032828\|Ga0335080_11677311	Not Available	624	Open in IMG/M
3300032896\|Ga0335075_11487424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300032954\|Ga0335083_10063329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3819	Open in IMG/M
3300033412\|Ga0310810_10765468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.67%
Host-Associated	Host-Associated	13.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.76%
Plants	Host-Associated → Plants	13.33%
Aquatic	Environmental → Aquatic	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Freshwater	Environmental → Aquatic → Freshwater	1.90%
Peat	Environmental → Terrestrial → Peat	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.24%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.95%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026886	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1088399952	3300000955	Soil	PVVHAGCVEPIFEAVLANDVSGIAPAEPAQRMDEDLLVTDVHWLYRGDTPLHLA
Ga0062387_1004526283	3300004091	Bog Forest Soil	VEPIFEAALADDPSGIAAIVARTPGAAAQRMAEDTFVAELTHMLYRDDTPLHLAAAGLRYDAARAMLAAGTPVNAVNRR
Ga0066817_10154412	3300005146	Soil	VHAGCVEPIFEAVLANDPSRITPATAAQRMDEDLLLPELHWLYRGDTPLHLAAAGLRYDAARAVLAAGTPVNAVNR
Ga0066690_105696592	3300005177	Soil	MEPIFEAVLANDPSRIAAIEAGTPGAAKLRMDEDLLVTELPHMLYRGDTPLHLA
Ga0066684_105122241	3300005179	Soil	VHALRVEPIFEAVLANDPSRIAAGTSAAAAQRMDEDLFVAELPHWLYRGDTPLHLA
Ga0070690_1000178101	3300005330	Switchgrass Rhizosphere	VHAGCVEPIFEAALANDVSRITPAEAAQRMDVDLLITDVHWLYRGDTPLHLAAAALRYDAARAL
Ga0070661_1016548912	3300005344	Corn Rhizosphere	VEPIYAAVLAGDLSQITAAAAAQRMEEDLLVPGVHWRYRGDTPLHLAAAALRYDAA
Ga0070671_1007242551	3300005355	Switchgrass Rhizosphere	VEPIFAAVLADDLSPITAAAAATRMEEDLLIPGVHWLYRGD
Ga0008090_152983842	3300005363	Tropical Rainforest Soil	VHAGCVEPIFEAVLANDPSRITTAAAAQRMEEDLFVAGLPHWLYRGDTPLHLAAAGLRY
Ga0070713_1005109791	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VEPIFAAVLADDLSQITAAAAATRMEEDLLIPGVHWLYRGDTPLHLAAARRQYEAARALLAA
Ga0070681_104766852	3300005458	Corn Rhizosphere	VHAGCVEPIFEAVLANDPSRITAAAAAQRMAEDLFVAELPHMLYQGDTPLHLAAAGLRYDAA
Ga0070706_1012361201	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VEPIFEAALANDPAEIAAIAARSPGAAGHRMAEGLFLAELPHTLYEGDTPLHLAAAGLRYDAARALL
Ga0070707_1004854071	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEPIFEAVLANDPSRIAAIEAGTPGAATQRMDEDLLVPELPHQLYRGDTPLHLAAAGLRY
Ga0070679_1019855471	3300005530	Corn Rhizosphere	VEPIFAAVLADDLSQITAAAAAQRMEEDLLVPQVHWLYRGDTPLHLAAAALRYDAAR
Ga0070697_1017342351	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VHAGCVEPIFEAVLANDVSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLHLAA
Ga0070696_1012943642	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VHAGCVEPIFEAALANDVSRITPAEAAQRMDVDLLITDVHWLYRGDTPLHLAAAG
Ga0070702_1016575331	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLH
Ga0066903_1040571822	3300005764	Tropical Forest Soil	MLGCVEPIFDAVLANDPSRITPAAAAQRMDEDVLVTELPHMLYRGDTPLHLAA
Ga0070715_103117911	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VEPIFAAVLAGDLSQITAAAAAQRMEEDLLVPQVHWLYRGDTPLHLAAAALRYDAAR
Ga0070712_1007993051	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VHAGFVEPIFEAVLADDPAEIAAIVARSPGAAAQRMAGDLFVAELPHMLYRGDTPLHLAAAGLRYDAACALLAGRRP
Ga0070712_1018773922	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VHAGRVEPIFEAVLANDPSRITPAAAAQRMEEDLFVAELPHMLYRGDSPLHLAAAGLRYAAARALLAAGTPVNAV
Ga0074062_126250312	3300006606	Soil	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDLLLPELHWLYRGDTPLH
Ga0075435_1015480422	3300007076	Populus Rhizosphere	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDLLITDVHWLYRGDTPLHLAAA
Ga0099795_103988371	3300007788	Vadose Zone Soil	MTSGWLVHAGSVEPIFEAVLANDPAEIAAIVARSPTAAAQRMAGDLFVAELPHMLYR
Ga0066709_1033613881	3300009137	Grasslands Soil	MEPIFAAVLANDPSRIAAIETATPGAAAQRMDEDLLVPELPHQLYRGDTPLHLAAAGLRYDAARALLAAGCPLAAV
Ga0114129_121233191	3300009147	Populus Rhizosphere	VVHADPVEPIFVAVLANDPSEIATIAGRTPGAIAQRMEQDVLVTELPHMLYRGDTPLHLA
Ga0105243_126472132	3300009148	Miscanthus Rhizosphere	VEPIFEAVLVNDPSRITPAAAAQRMDEDLLITDLHWLYRGDTPLHLAAAGLRYDAARALL
Ga0134128_111060961	3300010373	Terrestrial Soil	VEPIYAAVLAGVLSQITAAAAAQRMEEDLLVPQVHWLYRGDTPLHLAAAALRYDAARALL
Ga0134128_126479032	3300010373	Terrestrial Soil	VEPIFEAALANDVSRITPAAAAQRIDEDLLITDVHWLYRGDTPLHLAAAAL
Ga0126361_104919661	3300010876	Boreal Forest Soil	VEPIFEAVLANDSSRIAAIAARAPGAAAQRMDQDLFLAELPHMLYRGDTPLHLAAAGLRY
Ga0137376_114321131	3300012208	Vadose Zone Soil	VEPIFEAVLADDASRITPAAAAQRMDEDFLVTEVHWLYRGDTPLHL
Ga0137379_107256062	3300012209	Vadose Zone Soil	VEPIFEAVLANDPSEIEAIAARTPGAAAQRRTEDLFVAELPHMLYRGDTPLHLAAA
Ga0137378_116310251	3300012210	Vadose Zone Soil	VEPIFEAVLAKDPSRIAAIAAGTPGAVAQRMEADLFVAELPHMLYRGDTPLHLAAAGLRCDAARALLAAG
Ga0137370_103708703	3300012285	Vadose Zone Soil	MEPIFEAVLANDPSRIAAIETATPGAAAQRMDEDLLVPELPHQLYRGDTPLHLAAA
Ga0137360_118009491	3300012361	Vadose Zone Soil	MTFGWLVHAGSVEPIFEAVLANDPAEIAAIVARSPTAAAQRMAGDLFVAELPHMLYQGDRPLHL
Ga0157340_10019422	3300012473	Arabidopsis Rhizosphere	VEPIFEAVLANDPSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLHLAAAGLR
Ga0157335_10292762	3300012492	Arabidopsis Rhizosphere	VEPIFEAVLANDPSRITPAEAAQRMDEDLLITDVHWLYRGDTPLHLAAAGLRYDAARA
Ga0157355_10180512	3300012493	Unplanted Soil	VEPIFEAVLANDPSRITPAEAAQRMDEDLLITDVHWLYRGDTPLHLAAAALRYDAARALL
Ga0157341_10172112	3300012494	Arabidopsis Rhizosphere	VEPIFEAVLADDPSRITPAAAAQRMDEDVLITDVHWLYRGDTPLH
Ga0157304_10581072	3300012882	Soil	VEPIFEAVLANDPSRITPAAAAQRMDEDFLVTGVHWLYRGDTPLHLAAAGLRYDAARALL
Ga0137404_104684732	3300012929	Vadose Zone Soil	VDPIFEAVLRNDPSRITPAAAAQRMDEDLLVPEVHWLYRGDTPLHLAAAGLR
Ga0164300_100340804	3300012951	Soil	VEPIFEAVLANDPSRITPAAAAQRMDEDVLVANVHWLYRGDTPLHLTAAGLRYDAARALLAARTPVNAVNRRGAAALH
Ga0164301_105464982	3300012960	Soil	VEPIFEAVLANDPSRITPAAAAQRMDEDLLITDVHWLYRADTPLHLAAAGLR
Ga0157369_118159782	3300013105	Corn Rhizosphere	VEPIFEAVLANDPSRITAAAAAQRMAEDLFVAELPHMLYQGDTPLHLAAAGLRYDAA
Ga0157374_121827051	3300013296	Miscanthus Rhizosphere	VEPIFEAVLANDPSRITPAAAAQRMDEDLLVTEVHWLYRGDTPLHLAAAGLRYDAARALLAAGTP
Ga0132255_1001319911	3300015374	Arabidopsis Rhizosphere	VEPIFEAVLANDPSRITPAAAAQRMDEDLLITDVHWLYRGDTPLH
Ga0182033_108778062	3300016319	Soil	VEPIFEAALANDPSRITAAEAARRAEDDLYVAELPHMLYRGDTPLHLAAAGLRYAAARA
Ga0182035_111958351	3300016341	Soil	VEPIFEAALANDPSRITAAEAARRAEDDLYVAELPHMLYRGDTPLHLAAAGLRY
Ga0187879_103836583	3300017946	Peatland	MVPPAALGQIVRPFVHAGCVEPIFKAVLANDPSRITAPAAAQRMEEDLFVAELHHALYRGDTPLHLAAAGLR
Ga0187765_112353452	3300018060	Tropical Peatland	VEPIVAAVLANDPSRITAAVAAERLDEDLFVAELPHQLYRGDTPLRQALAAGRL
Ga0066667_105590861	3300018433	Grasslands Soil	VHALRVEPIFEAVLANDPSRIAAGTSAAAAQRMDEDLFVAELPHWLYRGDTPLHLAAAGLRCDA
Ga0173479_106117672	3300019362	Soil	VEPIFEAVLANDPSRITPAAAAQRMDEDVLITDVHWLYRGDTPLHLAA
Ga0193747_11542751	3300019885	Soil	VHAGCVEPIFEAVLANDPSRITPTAAAQRMDEDLLIMDVHWLYRGDTPLHLAAAGLRYDAARALL
Ga0193728_13282152	3300019890	Soil	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDLLVTEVHWLYRGDTPLHLAA
Ga0210395_109266342	3300020582	Soil	VEPIFEAVLADDPSRIAAAAAAQRMEDDLFVAELPHMLYRGDTPLHLAAAGLRYDAARAL
Ga0213882_103685332	3300021362	Exposed Rock	VHAGDVKLIFEAVLANDPSRITAAAATQRMDEDLFVAELPHWLYRGDTPLHLAAAGLRYDAARALVAAGAPVN
Ga0210385_106037171	3300021402	Soil	VHAGYVEPIFEAVLANDPSRITPAAAAQRMDEDLLVTEVHWLYRGDTPLHLAAAGLRYDAARSLLAAGTPVNAVN
Ga0210402_113385632	3300021478	Soil	VHAGCVEPIFEAVLANDPSRIAAIEAGTPGAATLRMDEDLLVPELPHQLYRGDTPLHLA
Ga0247691_10651172	3300024222	Soil	VHAGCVEPIFEAVLANDVSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLHLAAAALRYDAARALL
Ga0247692_10321141	3300024279	Soil	VHAGCVEPIFEAVLANDVSRITPAAAAQRMDEDLLVTDVHWLYRGDTPL
Ga0247668_10715271	3300024331	Soil	VHAGCVEPIFEAVLANDPSRITLAAAAQRMDEDLLITDVHWLYRGDTPLHLAAAALRYDAARAL
Ga0207680_103617642	3300025903	Switchgrass Rhizosphere	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLHLAAAGLRYD
Ga0207685_102458312	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VEPIFAAVLAGDLSQITAAAAAQRMEEDLLVPQVHWLYRGDTPLHLAAAAL
Ga0207652_103753332	3300025921	Corn Rhizosphere	VHAGCVEPIFEAVLANDPSRITPAAAAQRIDEDLLITDVHWLYRGDTPLHLAAAALRYDAARALLAA
Ga0207652_109061931	3300025921	Corn Rhizosphere	VEPIFAAVLADDLSQITAAAAAQRMEEDLLVPGVHWLYRGDTPLHLAAAALRY
Ga0207664_111708412	3300025929	Agricultural Soil	VEPIFEAALANDPAEIAAIAATSPGAAAHRMAQGLFLAELPHTLCQGDTPLHLAAAGLR
Ga0207664_115110961	3300025929	Agricultural Soil	VEPIFAAILADDLFPITAAAAAQRMEEDLLVPGVHWLYRGDTPLHLAAARR
Ga0207686_102101602	3300025934	Miscanthus Rhizosphere	VHAGCVEPIFEAVLANDPSRITPAAAAQRIDEDLLITDVHWLYRGDTPLHLAAAALR
Ga0207702_103373462	3300026078	Corn Rhizosphere	VHAGCVEPIFEAVLANDVSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLHLAAAGLRYDAARALLAAGTP
Ga0207982_10033462	3300026886	Soil	VHAGCVEPIFEAVLANDPSRITPATAAQRMDEDLLLPELHWLYRGDTPLH
Ga0209325_10214301	3300027050	Forest Soil	VEPIFEAVLANDPSRITPAAAAQRMDEDVLVTDVHWLYRGDTPLHLAAA
Ga0209111_10371611	3300027058	Forest Soil	VHAGCVEPIFEAVLANNPSRITPAAAAQRMDVDLLITDVHWLYRGDTPLHLAAAGLRYDAARALLAAGT
Ga0209113_10073112	3300027517	Forest Soil	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDLLVTDVHWLYRGDTPLHLAAAGLRI
Ga0307315_101507712	3300028721	Soil	VHAGCVEPIFEAVLTNDPSPITPAAAAQRMEEDLLVTEVHWLYRGDTPLHLAAA
Ga0307300_100796742	3300028880	Soil	MVQTVHADPVEPILVAVLANDSSEIVAIAARTPSAIAQRLQQDVLVTELPHMLYQGDRPLHLSAAALRHGAAR
Ga0318541_101207253	3300031545	Soil	MEAIFEAALADDPSRIAAIVATTPGAAAQRMDEGQFVTEVTHLLYRGDTPLHLAAAGLRYNAARA
Ga0318515_103545461	3300031572	Soil	MEAIFEAALADDPSRIAAIVATTPGAAAQRMDEGQFVTEVTHLLYRGDTPLHLAAAGLRYNAARAL
Ga0318574_104935172	3300031680	Soil	MLGCVEPILEAVLANDPSRITAAAAAQRMDEDLLVTELPHQLYRGDTPLHLAAAGLRYDAAPRRRRHPVRRRPQRH
Ga0318535_101522642	3300031764	Soil	MEAIFEAALADDPSRIAAIVATTPGAAAQRMDEGQFVTEVTHLLYRGDTPLHLAAAGLRARTARC
Ga0318509_102434312	3300031768	Soil	MEAIFEAALADDPSRIAAIVATTPGAAAQRMDEGQFVTEVTHLLYRGDTPLHLAAAGLR
Ga0318498_101632452	3300031778	Soil	MEAIFEAALADDPSRIAAIVATTPGAAAQRMDEGQFVTEVTHLLYRGDTPLHLAAAGLRY
Ga0318508_11977011	3300031780	Soil	VEPIFEAALANDPSRITAAEAARRAEDDLYVAELPHM
Ga0318517_103586761	3300031835	Soil	VEPIFEAVLANDPSRITAAAAAQRMEDDLFVAELPHMLYRGDTPREDRTEGGSYGPADL
Ga0306919_112363231	3300031879	Soil	VEPIFAVVLANDPSRITAAAAAQRLDEDLFVAELPHQLYRGDT
Ga0318522_102000821	3300031894	Soil	VEPIFEAALANDPSRITAAEAARRAEDDLYVAELPHMLYRGDTPLH
Ga0318520_107782642	3300031897	Soil	MLGCVEPILEAVLANDLSRITAAAAAQRMGEDLLVTELPHQLYRGDTPLHLAAAGLRYDAAPRRRRHPVQR
Ga0302322_1034176381	3300031902	Fen	MLKFVEPIFVAVLANDSFEIAAIGSRTPDAIALRMDQDVLVAGLHWLYRGDTPLHLAAAGLRYEAACALLAAGSPVDAVNRR
Ga0310900_117385222	3300031908	Soil	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDLLVTELPHWLYRGDTPLH
Ga0306923_101380664	3300031910	Soil	VEPIFAVVLANDPSRITAAAAAQRLDEDLFVAELPHQLYRGDTP
Ga0310911_103022282	3300032035	Soil	MEAIFEAALADDPSRIAAIVATTPGAAAQRMDEGQFVTEVTHLLYRGDTPLHLAAAGLRCDAARALL
Ga0318504_101891731	3300032063	Soil	VEPIFEAVLANDPSRITAAEAAQCAEDDLYVAELPHMLYRGDTPLHLAAAGLRYAAARALLAAGTPVDAVN
Ga0318513_100348541	3300032065	Soil	VEPIFEAVLANDPSRITAAEAAQCAEDDLYVAELPHMLYRGDTPLHLAAAGLRYAAARALLAAGTPVDAVNR
Ga0318553_100850811	3300032068	Soil	MEAIFEAALADDPSRIAAIVATTPGAAAQRMDEGQFVTEVTHLLYRGDTPLHLAAAGLRYNA
Ga0318525_104407472	3300032089	Soil	VEPIFEAVLANDPSRITAAAAAQRMEDDLFVAELPHMLYRGDTPRE
Ga0318518_104139862	3300032090	Soil	VEPIFEAALANDPSRITAAEAARRAEDDLYVAELPHMLYRGDTPLHLAAAGLRYAAARALLAAGTPV
Ga0307470_112578172	3300032174	Hardwood Forest Soil	MEPIFEAVLANDPSRIAAIEAGTPGAAAQRMDEDLLVTELPHQLYRGDTPLHLAAAGLRYDAARALLAAGSPV
Ga0307470_117895742	3300032174	Hardwood Forest Soil	VEPIFEAVLADDPSRIAAAAAAQRMEDDLFVAELPHMLYRGDTPL
Ga0348332_123716161	3300032515	Plant Litter	VEPIFEAVLANDASRITAAAAAQRVEEDLFVAELPHMLYRGDTPLHLAAA
Ga0335085_100069981	3300032770	Soil	VEAIFEAVLANDPSRITPAAAAQRMDEDLLLAELHWLYRGDTPLHLAAAGFRYDAARA
Ga0335085_121312761	3300032770	Soil	VHAGCVEPIFEAVLANDPSRITTAAAAQRMDEDLLVTELPHWLYRGDTPLHL
Ga0335078_120554971	3300032805	Soil	VHPGCVEPIFEAVLANDTSRITPDAAAQRMDEDVLITDVHWLYRGDTPLHLASAGLRYDAARALLAAGT
Ga0335080_116773111	3300032828	Soil	VHAGCVEPIVEAVLANDPSRITTAAAAQRMEEDLFVAELPHWLYRGDTPLHLAAAGL
Ga0335075_114874241	3300032896	Soil	MHPGCVEPIFEAVLANDPSRITPDAAAQRMDEDVLISDVHWLYRGDTPL
Ga0335083_100633294	3300032954	Soil	VEPIFEAVLANDPSRITTAAAAQRMDEDLLVTELPHWLYRGDTPLHLAA
Ga0310810_107654682	3300033412	Soil	VHAGCVEPIFEAVLANDPSRITPAAAAQRMDEDVLITDVHWLYRGDTPLHLAAAGLRYDAARALLA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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