Metagenome / Metatranscriptome Family F096046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096046
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	94 residues
Representative Sequence	SICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDAVGIDYETVISQYNKKQRFFNVTFDEPCGMSHK
Number of Associated Samples	84
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	29.52 %
% of genes near scaffold ends (potentially truncated)	59.05 %
% of genes from short scaffolds (< 2000 bps)	74.29 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (36.190 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (27.619 % of family members)
Environment Ontology (ENVO)	Unclassified (73.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (80.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.52% β-sheet: 9.76% Coil/Unstructured: 57.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04055	Radical_SAM	49.52
PF13186	SPASM	7.62
PF13394	Fer4_14	2.86
PF13353	Fer4_12	1.90
PF02801	Ketoacyl-synt_C	0.95
PF00471	Ribosomal_L33	0.95
PF05992	SbmA_BacA	0.95
PF14279	HNH_5	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.81 %
Unclassified	root	N/A	36.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Viruses	superkingdom	All Organisms → Viruses	34.29 %
cellular organisms	root	All Organisms → cellular organisms	29.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	7.62 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11.43 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	7.62 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	11.43 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	11.43 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	7.62 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.81 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	11.43 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	7.62 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.81 %
Candidatus Endolissoclinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	11.43 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	7.62 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3.81 %
unclassified Candidatus Endolissoclinum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	11.43 %
Planctomycetaceae bacterium TMED240	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	7.62 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	3.81 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.29 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	11.43 %
Planctomycetaceae bacterium TMED240	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	7.62 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	3.81 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	2.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876010\|none_p0102241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	507	Open in IMG/M
3300000225\|SI34jun09_120mDRAFT_1008673	All Organisms → Viruses → Predicted Viral	3413	Open in IMG/M
3300000238\|SI36aug09_100mDRAFT_1045289	Not Available	502	Open in IMG/M
3300000260\|LP_A_09_P20_500DRAFT_1036193	Not Available	644	Open in IMG/M
3300001584\|JGI12074J15755_1001448	All Organisms → Viruses → Predicted Viral	2070	Open in IMG/M
3300003540\|FS896DNA_10143358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	637	Open in IMG/M
3300004097\|Ga0055584_100004875	Not Available	13149	Open in IMG/M
3300004110\|Ga0008648_10185504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	567	Open in IMG/M
3300004279\|Ga0066605_10338180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	548	Open in IMG/M
3300005399\|Ga0066860_10000760	All Organisms → cellular organisms → Bacteria	14407	Open in IMG/M
3300005427\|Ga0066851_10206440	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	617	Open in IMG/M
3300005941\|Ga0070743_10137194	Not Available	814	Open in IMG/M
3300006011\|Ga0066373_10081463	Not Available	907	Open in IMG/M
3300006164\|Ga0075441_10375287	Not Available	516	Open in IMG/M
3300006193\|Ga0075445_10056646	All Organisms → Viruses → Predicted Viral	1541	Open in IMG/M
3300006193\|Ga0075445_10235606	Not Available	630	Open in IMG/M
3300006193\|Ga0075445_10309021	Not Available	533	Open in IMG/M
3300006352\|Ga0075448_10024615	All Organisms → Viruses → Predicted Viral	1947	Open in IMG/M
3300006752\|Ga0098048_1049746	All Organisms → Viruses → Predicted Viral	1320	Open in IMG/M
3300006752\|Ga0098048_1117430	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	800	Open in IMG/M
3300006789\|Ga0098054_1019693	All Organisms → Viruses → Predicted Viral	2693	Open in IMG/M
3300006789\|Ga0098054_1052454	All Organisms → Viruses → Predicted Viral	1559	Open in IMG/M
3300006789\|Ga0098054_1094375	All Organisms → Viruses → Predicted Viral	1122	Open in IMG/M
3300006793\|Ga0098055_1014747	All Organisms → Viruses → Predicted Viral	3426	Open in IMG/M
3300006793\|Ga0098055_1120229	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300006793\|Ga0098055_1358442	Not Available	542	Open in IMG/M
3300006924\|Ga0098051_1010051	All Organisms → Viruses → Predicted Viral	2896	Open in IMG/M
3300006924\|Ga0098051_1170076	Not Available	573	Open in IMG/M
3300006929\|Ga0098036_1081726	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300006990\|Ga0098046_1055093	Not Available	923	Open in IMG/M
3300007512\|Ga0105016_1278182	Not Available	680	Open in IMG/M
3300007513\|Ga0105019_1000115	Not Available	127168	Open in IMG/M
3300007514\|Ga0105020_1003271	Not Available	19664	Open in IMG/M
3300007558\|Ga0102822_1012463	All Organisms → Viruses → Predicted Viral	2123	Open in IMG/M
3300007756\|Ga0105664_1048473	Not Available	525	Open in IMG/M
3300007963\|Ga0110931_1257196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	519	Open in IMG/M
3300007981\|Ga0102904_1013250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	1807	Open in IMG/M
3300008253\|Ga0105349_10002073	Not Available	8554	Open in IMG/M
3300008253\|Ga0105349_10043724	All Organisms → Viruses → Predicted Viral	1887	Open in IMG/M
3300008735\|Ga0115657_1112540	All Organisms → Viruses → Predicted Viral	1634	Open in IMG/M
3300009079\|Ga0102814_10503027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	661	Open in IMG/M
3300009080\|Ga0102815_10007669	All Organisms → cellular organisms → Bacteria	6241	Open in IMG/M
3300009086\|Ga0102812_10802842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	522	Open in IMG/M
3300009420\|Ga0114994_10714645	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	653	Open in IMG/M
3300009428\|Ga0114915_1063838	Not Available	1155	Open in IMG/M
3300009436\|Ga0115008_10257244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	1242	Open in IMG/M
3300010149\|Ga0098049_1045607	All Organisms → Viruses → Predicted Viral	1405	Open in IMG/M
3300010149\|Ga0098049_1243098	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	548	Open in IMG/M
3300010151\|Ga0098061_1007248	All Organisms → Viruses → Predicted Viral	4964	Open in IMG/M
3300010151\|Ga0098061_1262532	Not Available	600	Open in IMG/M
3300010153\|Ga0098059_1021295	All Organisms → Viruses → Predicted Viral	2651	Open in IMG/M
3300017753\|Ga0181407_1074541	Not Available	869	Open in IMG/M
3300020358\|Ga0211689_1008000	All Organisms → Viruses → Predicted Viral	4172	Open in IMG/M
3300020375\|Ga0211656_10063470	Not Available	1181	Open in IMG/M
3300020383\|Ga0211646_10265014	Not Available	609	Open in IMG/M
3300020396\|Ga0211687_10313972	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	616	Open in IMG/M
3300021084\|Ga0206678_10150033	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300021084\|Ga0206678_10286076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	796	Open in IMG/M
3300021087\|Ga0206683_10187095	All Organisms → Viruses → Predicted Viral	1092	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10064934	All Organisms → Viruses → Predicted Viral	1500	Open in IMG/M
3300024185\|Ga0228669_1110546	Not Available	505	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10340177	Not Available	563	Open in IMG/M
3300024297\|Ga0228658_1142891	Not Available	577	Open in IMG/M
(restricted) 3300024324\|Ga0233443_1099528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	1120	Open in IMG/M
3300024346\|Ga0244775_10032242	All Organisms → Viruses → Predicted Viral	4661	Open in IMG/M
3300024346\|Ga0244775_10113931	All Organisms → Viruses → Predicted Viral	2294	Open in IMG/M
3300025084\|Ga0208298_1001759	Not Available	7687	Open in IMG/M
3300025084\|Ga0208298_1049958	Not Available	821	Open in IMG/M
3300025108\|Ga0208793_1067087	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300025722\|Ga0209660_1267013	Not Available	519	Open in IMG/M
3300026264\|Ga0207991_1000582	Not Available	24328	Open in IMG/M
3300026491\|Ga0228641_1092989	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	660	Open in IMG/M
3300026513\|Ga0247590_1137677	Not Available	627	Open in IMG/M
3300027668\|Ga0209482_1061483	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300027672\|Ga0209383_1052320	All Organisms → Viruses → Predicted Viral	1523	Open in IMG/M
3300027685\|Ga0209554_1170113	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	655	Open in IMG/M
3300027686\|Ga0209071_1014475	All Organisms → Viruses → Predicted Viral	2553	Open in IMG/M
3300027714\|Ga0209815_1088959	All Organisms → Viruses → Predicted Viral	1043	Open in IMG/M
3300027833\|Ga0209092_10168914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	1250	Open in IMG/M
3300028008\|Ga0228674_1007253	All Organisms → cellular organisms → Bacteria	5344	Open in IMG/M
3300028132\|Ga0228649_1039043	All Organisms → Viruses → Predicted Viral	1301	Open in IMG/M
3300028134\|Ga0256411_1259753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	533	Open in IMG/M
3300028189\|Ga0257127_1090699	Not Available	912	Open in IMG/M
3300028190\|Ga0257108_1212295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	546	Open in IMG/M
3300028192\|Ga0257107_1000337	Not Available	18064	Open in IMG/M
3300028192\|Ga0257107_1008162	All Organisms → Viruses → Predicted Viral	3479	Open in IMG/M
3300028192\|Ga0257107_1018276	All Organisms → Viruses → Predicted Viral	2251	Open in IMG/M
3300028192\|Ga0257107_1123279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	766	Open in IMG/M
3300031167\|Ga0308023_1034417	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	1002	Open in IMG/M
3300031612\|Ga0308009_10007238	Not Available	4798	Open in IMG/M
3300031628\|Ga0308014_1065811	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	874	Open in IMG/M
3300031644\|Ga0308001_10140706	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	992	Open in IMG/M
3300031655\|Ga0308018_10026219	All Organisms → Viruses → Predicted Viral	2198	Open in IMG/M
3300031658\|Ga0307984_1047184	All Organisms → Viruses → Predicted Viral	1354	Open in IMG/M
3300031658\|Ga0307984_1094329	Not Available	875	Open in IMG/M
3300031683\|Ga0308006_10182033	Not Available	652	Open in IMG/M
3300031696\|Ga0307995_1107603	All Organisms → Viruses → Predicted Viral	1079	Open in IMG/M
3300031696\|Ga0307995_1185269	Not Available	748	Open in IMG/M
3300031705\|Ga0308003_1050496	Not Available	1447	Open in IMG/M
3300031721\|Ga0308013_10184597	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	776	Open in IMG/M
3300031757\|Ga0315328_10032581	All Organisms → Viruses → Predicted Viral	2840	Open in IMG/M
3300031757\|Ga0315328_10600586	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	628	Open in IMG/M
3300032073\|Ga0315315_11321888	Not Available	632	Open in IMG/M
3300034695\|Ga0372840_018609	All Organisms → Viruses → Predicted Viral	1947	Open in IMG/M
3300034695\|Ga0372840_081029	Not Available	964	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	38.10%
Unclassified	Environmental → Aquatic → Marine → Unclassified	29.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.24%
Coastal	Environmental → Aquatic → Marine → Coastal	10.48%
Inlet	Environmental → Aquatic → Marine → Inlet	3.81%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.95%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.95%
Strait	Environmental → Aquatic → Marine → Strait	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	36.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	29.52%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.48%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	10.48%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.76%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.81%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	1.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.95%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.95%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	27.62%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	13.33%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	11.43%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	6.67%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	5.71%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.76%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.76%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.81%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.81%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.86%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.86%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.90%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.95%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.95%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.95%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine	0.95%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.95%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.95%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876010	Marine microbial communities from Columbia River, CM, sample from Newport Hydroline, GS310-0p1-Hyp-75m	Environmental	Open in IMG/M
3300000225	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120m	Environmental	Open in IMG/M
3300000238	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 100m	Environmental	Open in IMG/M
3300000260	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500	Environmental	Open in IMG/M
3300001584	Marine microbial communities from the Deep Pacific Ocean - MP2097	Environmental	Open in IMG/M
3300003540	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004110	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007512	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007558	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733	Environmental	Open in IMG/M
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300008253	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon	Environmental	Open in IMG/M
3300008735	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020375	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)	Environmental	Open in IMG/M
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024185	Seawater microbial communities from Monterey Bay, California, United States - 84D	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024297	Seawater microbial communities from Monterey Bay, California, United States - 71D	Environmental	Open in IMG/M
3300024324 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025722	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300026264	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275 (SPAdes)	Environmental	Open in IMG/M
3300026491	Seawater microbial communities from Monterey Bay, California, United States - 52D	Environmental	Open in IMG/M
3300026513	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 51R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028132	Seawater microbial communities from Monterey Bay, California, United States - 61D	Environmental	Open in IMG/M
3300028134	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028189	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_135m	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300031167	Marine microbial communities from water near the shore, Antarctic Ocean - #418	Environmental	Open in IMG/M
3300031612	Marine microbial communities from water near the shore, Antarctic Ocean - #127	Environmental	Open in IMG/M
3300031628	Marine microbial communities from water near the shore, Antarctic Ocean - #229	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031655	Marine microbial communities from water near the shore, Antarctic Ocean - #282	Environmental	Open in IMG/M
3300031658	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78	Environmental	Open in IMG/M
3300031683	Marine microbial communities from water near the shore, Antarctic Ocean - #69	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031705	Marine microbial communities from water near the shore, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
none_01022411	2236876010	Marine Estuarine	MKKIETFNPPDNCNICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRLLQFYI
SI34jun09_120mDRAFT_10086732	3300000225	Marine	MSEHLELQSKCTICGNEYDETCGGVQGYFGITPVTFCEWCYSSVYDMVEQDIRDGIREESNEDESKDIKTILDTVGIDYETVITKYNKKQRFFNVTFDEPCGMSHK*
SI36aug09_100mDRAFT_10452892	3300000238	Marine	FGVTPVTFCEWCYGSIYDMISQDVKEQIREDLDEDDSADIKTILDTVGIDYETVMTNYNKKQRFFNFTFDEPCGMSHK*
LP_A_09_P20_500DRAFT_10361933	3300000260	Marine	CGNEYDESCGGIQGHFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDREDMRHILNTVGVDYKVVEQAYETKQRFFNVTFNEPCGMSHK*
JGI12074J15755_10014481	3300001584	Deep Ocean	ACGGIQGHFGVTPVTFCEWCYGSIYDMVEQDIRDNIREQMNEEDKEDIKTILDAVGIDYKIVENAYVNKQRFFNFRFDEPCGMSRK*
FS896DNA_101433582	3300003540	Diffuse Hydrothermal Flow Volcanic Vent	CGGIQGHFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDKGDMKTILDYVGVDYTRVTDAYRNKQRFFSVTFDEPCGMSHK*
Ga0055584_10000487511	3300004097	Pelagic Marine	MSLELQLESKCTICGNEYDETCGGVQGHFGITPVTFCEWCYSSVYDMVEQDIRDGIREELNEDESEDIKTILDTVGIDYETVINKYNKKQRFFNFKFDEPCGMSHK*
Ga0008648_101855041	3300004110	Marine	DNCNICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0066605_103381802	3300004279	Marine	MSEHLELQSKCTICGNEYDETCGGVQGYFGITPVTFCEWCYSSVYDMVEQDIRDGIREESNEDESKDIKTILDTVGIDYETVITKYNKKQRFFNV
Ga0066860_1000076014	3300005399	Marine	MKTNEAEQLEIDECSICGNEYDKERGGMQGHFGVTPVTFCEWCYSSIYDMIEPDIRDNVREQMNEEDKDDMKTILDYVGVDYTRVTDAYRNKQRFFSVTFDEPCGMSRK*
Ga0066851_102064402	3300005427	Marine	SDNCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILNAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0070743_101371942	3300005941	Estuarine	MSLELQLESKCTICGNEYDETCGGVQGHFGITPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0066373_100814633	3300006011	Marine	MKKTNVKTIQDNDTLTFTPPSTCSVCNSEYDEDRGGMQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFNEPCGMSRK*
Ga0075441_103752872	3300006164	Marine	SVIDMASQHLGLDEMDEDDSEDMKTILDTVGIDYDKVIKQYNKKQRFFSVMIDEPCGMSHK*
Ga0075445_100566461	3300006193	Marine	DEECGGVQGLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK*
Ga0075445_102356061	3300006193	Marine	GVQGLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK*
Ga0075445_103090211	3300006193	Marine	HFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDREDMRHILNTVGVDYKVVEQAYETKQRFFNVTFNEPCGMSHK*
Ga0075448_100246153	3300006352	Marine	VQGLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK*
Ga0098048_10497462	3300006752	Marine	MKKTNVKTTQDNDTLIFNPSDNCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILNAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098048_11174303	3300006752	Marine	MKKTNVKTIQDNDTLTFTPPSTCSVCNSEYDEDRGGMQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFDEPCGMSHK*
Ga0098054_10196935	3300006789	Marine	MKKMKLKTTQDNDTLIFNPSDSCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098054_10524544	3300006789	Marine	MKKTNVKTTQDNDTLIFNPSDNCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILGAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098054_10943751	3300006789	Marine	WCYGSIYDMISQDVKDQIREELNEDDSEDMKTILNAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098055_10147474	3300006793	Marine	MKKIETFNPPDNCNICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098055_11202293	3300006793	Marine	KTTQDNDTLIFNPSDNCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILGAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098055_13584421	3300006793	Marine	VTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILNAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098051_10100511	3300006924	Marine	TPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILGAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098051_11700762	3300006924	Marine	TPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILNAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098036_10817261	3300006929	Marine	QDNDTLTFTPPSTCSVCNSEYDEDRGGMQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFDEPCGMSHK*
Ga0098046_10550933	3300006990	Marine	MKKTNVKTTQDNDTLIFNPSDNCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0105016_12781821	3300007512	Marine	VIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFNEPCGMSRK*
Ga0105019_1000115142	3300007513	Marine	MQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFNEPCGMSRK*
Ga0105020_100327121	3300007514	Marine	VPDNCSICGNEYDEACGGIQGHFGITPVTFCEWCYGSIYDMVEQDIRDNIEEELNQKDRDDLRTVLSAVNIDYKRVEQAYERKQRFFSVTFNEPCGMSHK*
Ga0102822_10124632	3300007558	Estuarine	MSLELQLESKCTICGNEYDETCGGVQGHFGITPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVISQYNKKQRFFNVTFDEPCGMSHK*
Ga0105664_10484731	3300007756	Background Seawater	GGIQGHFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDKGDMKTILEYVGIDYQRVADAYRNKQRFFSVTFDEPCGMSRK*
Ga0110931_12571962	3300007963	Marine	MQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFDEPCGMSHK*
Ga0102904_10132501	3300007981	Estuarine	SCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0105349_100020732	3300008253	Methane Seep Mesocosm	MNVKTIQDNDTLIFTPPETCSICSSEYDEDCGGIQGYFGVTPVTFCEWCYSSIYDMIAQDVKDQVREEMNDEDREDMRHILSTVGIDYKRIEQAYETKQRFFNVTFNEPCGMSRK*
Ga0105349_100437243	3300008253	Methane Seep Mesocosm	MKKTNVKTTQDNDTLIFNPSDSCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0115657_11125401	3300008735	Marine	TIQDNDTLTFTPPSTCSVCNSEYDEDRGGMQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFNEPCGMSRK*
Ga0102814_105030272	3300009079	Estuarine	MKLKTIQDNDTLIFKPSDSCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0102815_1000766914	3300009080	Estuarine	CGGVQGHFGITPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0102812_108028422	3300009086	Estuarine	MSLELQLESKCTICGNEYDETCGGVQGHFGITPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKLRFFNFTFDEPCGMSHK*
Ga0114994_107146452	3300009420	Marine	VTPVTFCEWCYSSVIDMASQHLGLDEMDEDDSEDMKTILDTVGIDYDKVITQYKKKQRFFSVMIDEPCGMSHK*
Ga0114915_10638381	3300009428	Deep Ocean	FCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK*
Ga0115008_102572444	3300009436	Marine	MKKRTANDYIRELQTSQPKPKCSICNDEYDETCGGIQGLFGVMPVTFCEWCYSSIYDMVEQDIRDNVREEMAEEDREDIKTVLNTVGIDYEIVEKAYRTKQRFFNVRFDEPCGMSHK*
Ga0098049_10456072	3300010149	Marine	MKLKTIQDNDTLIFNPSDSCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0098049_12430982	3300010149	Marine	FGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTENMKTILDTVGIDYERVISQYNKKQRFFNVTFDEPCGMSHK*
Ga0098061_10072483	3300010151	Marine	MDMENEMNLEPSNNCSVCGNEYDESCGGIQGHFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDREDMRHILSTVGIDYKRIEQAYKTKQRFFNVTFNEPCGMSHK*
Ga0098061_12625322	3300010151	Marine	PSDKCSVCGGEYDEACGGIQGHFGVTPVTFCEWCYGSIYDMVEQDIRDNIREQMNEEDKEDIKTILDAVGIDYKIVENAYVNKQRFFNFRFDEPCGMSRK*
Ga0098059_10212955	3300010153	Marine	MKLKTTQDNDTLIFNPSDSCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK*
Ga0181407_10745411	3300017753	Seawater	CGNEYDETCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKEQIQEDSNESESQDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0211689_10080006	3300020358	Marine	MNENTTELLPMPKNCNICGGEYDETCGGTQGHFGVTPVTFCEWCYSSIIDMASQHIEEELEEDDTEDMKTILDAVGIDYETVITQYNKKQRFFNVTFDEPCGMSHK
Ga0211656_100634701	3300020375	Marine	FGITPITFCEWCLSSIYDMIEQDVKDQVREEMNDEDREDMRHILSTVGIDYKRIEQAYKTKQRFFNVIFNEPCGMSHK
Ga0211646_102650141	3300020383	Marine	SVCGNEYDESCGGIQGHFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDREDMRHILSTVGIDYKRIERAYKTKQRFFNVIFNEPCGMSHK
Ga0211687_103139721	3300020396	Marine	CGGTQGHFGVTPVTFCEWCYSSIIDMASQHIEEELEEGDTEDMRTILDAVGIDYETVITQYNKKQRFFNVTFDEPCGMSHK
Ga0206678_101500333	3300021084	Seawater	SEYDEDRGGMQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFDEPCGMSHK
Ga0206678_102860761	3300021084	Seawater	MKKIETFNPPDNCNICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0206683_101870953	3300021087	Seawater	MKKTNVKTIQDNDTLTFTPPPTCSVCNSEYDEDRGGMQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFDEPCGMSHK
(restricted) Ga0233412_100649342	3300023210	Seawater	MSLELQLESKCTICGNEYDETCGGVQGHFGITPVTFCEWCYGSIYDMISQDVKEQIREDLDEDDSADIKTILDTVGIDYETVMTNYNKKQRFFNFTFDEPCGMSHK
Ga0228669_11105462	3300024185	Seawater	NEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDTVGIDYERVISQYNKKQRFFNVTFDEPCGMSHK
(restricted) Ga0233438_103401771	3300024255	Seawater	SICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDAVGIDYETVISQYNKKQRFFNVTFDEPCGMSHK
Ga0228658_11428911	3300024297	Seawater	IYDMISQDVKDQIREDLNEDDTEDMKTILDTVGIDYERVISQYNKKQRFFNVTFDEPCGMSHK
(restricted) Ga0233443_10995282	3300024324	Seawater	NPPDNCNICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDSVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0244775_100322425	3300024346	Estuarine	MSLELQLESKCTICGNEYDETCGGVQGHFGITPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0244775_101139312	3300024346	Estuarine	MSEHLELQSKCTICGNEYDETCGGVQGYFGITPVTFCEWCYSSVYDMVEQDIRDGIREESNEDESKDIKTILDTVGIDYETVITKYNKKQRFFNVTFDEPCGMSHK
Ga0208298_10017592	3300025084	Marine	MKKMKLKTTQDNDTLIFNPSDSCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0208298_10499583	3300025084	Marine	MKKTNVKTTQDNDTLIFNPSDNCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILNAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0208793_10670872	3300025108	Marine	MKKTNVKTTQDNDTLIFNPSDNCSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREELNEDDSEDMKTILGAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0209660_12670132	3300025722	Marine	TICGNEYDETCGGVQGYFGITPVTFCEWCYSSVYDMVEQDIRDGIREESNEDESKDIKTILDTVGIDYETVITKYNKKQRFFNVTFDEPCGMSHK
Ga0207991_100058220	3300026264	Marine	MKTNEAEQLEIDECSICGNEYDKERGGMQGHFGVTPVTFCEWCYSSIYDMIEPDIRDNVREQMNEEDKDDMKTILDYVGVDYTRVTDAYRNKQRFFSVTFNEPCGMSRK
Ga0228641_10929892	3300026491	Seawater	PVTFCEWCYSSIIDMASQHIEEELEEDDTEDMKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0247590_11376772	3300026513	Seawater	FKPSDECSICGNEYDETCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKEQIQEDSNESESQDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0209482_10614833	3300027668	Marine	CYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0209383_10523203	3300027672	Marine	FGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0209554_11701132	3300027685	Marine	YDKERGGMQGHFGVTPVTFCEWCYSSIYDMIEPDIRDNVREQMNEEDKDDMKTILDYVGVDYTRVTDAYRNKQRFFSVTFNEPCGMSRK
Ga0209071_10144754	3300027686	Marine	CEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0209815_10889591	3300027714	Marine	ECGGVQGLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0209092_101689144	3300027833	Marine	MKKRTANDYIRELQTSQPKPKCSICNDEYDETCGGIQGLFGVMPVTFCEWCYSSIYDMVEQDIRDNVREEMAEEDREDIKTVLNTVGIDYEIVEKAYRTKQRFFNVRFDEPCGMSHK
Ga0228674_10072532	3300028008	Seawater	MNENTTELLPMPKNCNICGGEYDETCGGTQGHFGVTPVTFCEWCYSSIIDMASQHIEEELEEDDTEDMKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0228649_10390431	3300028132	Seawater	DESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDTVGIDYERVISQYNKKQRFFNVTFDEPCGMSHK
Ga0256411_12597531	3300028134	Seawater	CGGIQGLFGVMPVTFCEWCFSSIYDMVEQDIRDNVREEMAEEDREDIKTVLNTVGIDYEIVEKAYRTKQRFFNVRFDEPCGMSHK
Ga0257127_10906991	3300028189	Marine	GITPVTFCEWCYGSIYDMISQDVKDQIREDLNEDESEDIKTILDAVGIDYETVINKYNKKQRFFNFTFDEPCGMSHK
Ga0257108_12122951	3300028190	Marine	MKTNEAKQLEISERITAFQASDECSICGTEYDEECGGIQGHFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDKGDMKTILDYVGVDYTRVTDAYRNKQRFFSVTFDEPCGMSHK
Ga0257107_100033722	3300028192	Marine	MKEKINEEFLPKDNCSICGNEYDESCGGIQGHFGVTPVTFCEWCYASIYDMVEQDIRDNVREQMNEEDREDMRHILNTVGVDYKVVEQAYETKQRFFNVTFNEPCGMSHK
Ga0257107_10081622	3300028192	Marine	MKKMNVKTIQDNDTLIFTPSETCSICSSEYDEDCGGIQGYFGVTPVTFCEWCLSSIYDMIAQDVKDQVREEMNDEDREDMRHILNTVGIDYKRIEQAYETKQRFFNVTFNEPCGMSRK
Ga0257107_10182763	3300028192	Marine	MNFESSDKCSICGNEYDESCGGIQGHFGVTPVTFCEWCYASIYDMVEQDIRENVREQMNQEDREDMRHILGAVGVDYKVVEQAYETKQRFFNVTFNEPCGMSHK
Ga0257107_11232793	3300028192	Marine	MNKNEIDKKKILTAFEPKKICSICDSPYNEEAGGIQGHFGIMPVTFCEWCYSSIYDMIYQDVEIEIIDQFKENNQPDKDYMRTVLSKVGIDYKIVEQAYEDKQRFFNVTFNEPCGMSHK
Ga0308023_10344171	3300031167	Marine	VQGLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0308009_1000723810	3300031612	Marine	GVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0308014_10658112	3300031628	Marine	LFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0308001_101407061	3300031644	Marine	TPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0308018_100262191	3300031655	Marine	YDEECGGVQGLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0307984_10471842	3300031658	Marine	QGHFGVSPVTFCEWCYSSVIDMASQHLGLDEMDEDDSEDMKTILDTVGIDYDKVITQYKKKQRFFSVTFDEPCGMSRK
Ga0307984_10943292	3300031658	Marine	GVTPVTFCEWCYSSVIDMASQHLGLDEMDEDDSEDMKTILDTVGIDYDKVITQYKKKQRFFSVMIDEPCGMSHK
Ga0308006_101820333	3300031683	Marine	GLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0307995_11076032	3300031696	Marine	CYSSVIDMASQHLGLDEMDEDDSEDMKTILDTVGIDYDKVITQYKKKQRFFSVMIDEPCGMSHK
Ga0307995_11852692	3300031696	Marine	EYDAECGGVQGHFGVTPVTFCEWCYSSVIDMASQHLGLDEMDEDDSEDMKTILDTVGIDYDKVITQYKKKQRFFSVTFDEPCGMSRK
Ga0308003_10504961	3300031705	Marine	CGGVQGLFGVTPVTFCEWCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0308013_101845972	3300031721	Marine	WCYSSIIDMASQHIEADELGEDDTEDMKTILDTVGIDYETVMNQYNKKQRFFSVTFDEPCGMSHK
Ga0315328_100325816	3300031757	Seawater	MKKTNVKTIQDNDTLTFTPPPTCSVCNSEYDEDRGGMQGYFGVIPVTFCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILGAVGIDYKRIEQAYETKQRFFNVTFDEPCGMSHK
Ga0315328_106005861	3300031757	Seawater	FCEWCYGSIYDMISQDVKDQVREQMNDEDREDMRHILSAVGIDYKRIEQAYETKQRFFNVTFDEPCGMSHK
Ga0315315_113218882	3300032073	Seawater	CSICGNEYDESCGGVQGHFGVTPVTFCEWCYGSIYDMISQDVKDQIREDLNEDDTEDMKTILDTVGIDYERVISQYNKKQRFFNVTFDEPCGMSHK
Ga0372840_018609_540_887	3300034695	Seawater	MNVKTIQDNDTLIFTPSETCSICSSEYDEDCGGIQGYFGVTPVTFCEWCLSSIYDMIAQDVKDQVREEMNDEDREDMRHILNTVGIDYKRIEQAYETKQRFFNVTFNEPCGMSRK
Ga0372840_081029_706_963	3300034695	Seawater	DEECGGVQGLFGVTPVTFCEWCYASIIDMASQHIEADELDEDDSEDMKTILDTVGIDYHQVMSQYSKKQRFFNVTFDEPCGMSHK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters