Metagenome / Metatranscriptome Family F096001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096001
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	74 residues
Representative Sequence	MKRTAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDTFFTYEELRQICVLSVNTIH
Number of Associated Samples	74
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.62 %
% of genes near scaffold ends (potentially truncated)	19.05 %
% of genes from short scaffolds (< 2000 bps)	74.29 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.048 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (25.714 % of family members)
Environment Ontology (ENVO)	Unclassified (30.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.810 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.23% β-sheet: 14.42% Coil/Unstructured: 41.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01734	Patatin	15.24
PF09335	SNARE_assoc	3.81
PF13419	HAD_2	2.86
PF07676	PD40	1.90
PF12762	DDE_Tnp_IS1595	1.90
PF00072	Response_reg	0.95
PF07883	Cupin_2	0.95
PF02861	Clp_N	0.95
PF07690	MFS_1	0.95
PF13432	TPR_16	0.95
PF00474	SSF	0.95
PF12867	DinB_2	0.95
PF00589	Phage_integrase	0.95
PF00903	Glyoxalase	0.95
PF00563	EAL	0.95
PF04519	Bactofilin	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	15.24
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	15.24
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	15.24
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	3.81
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	3.81
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	3.81
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.95
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.95
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.95
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.95
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.43 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	66.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.90 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.90 %
Unclassified	root	N/A	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_106719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300001180\|JGI12695J13573_1003614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300001181\|JGI12663J13571_102153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300001593\|JGI12635J15846_10589933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300001593\|JGI12635J15846_10745410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300002245\|JGIcombinedJ26739_100140287	All Organisms → cellular organisms → Bacteria	2283	Open in IMG/M
3300002245\|JGIcombinedJ26739_100430572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300002245\|JGIcombinedJ26739_100834662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300004080\|Ga0062385_10126223	Not Available	1285	Open in IMG/M
3300004092\|Ga0062389_102020464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300005434\|Ga0070709_10190285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300005640\|Ga0075035_1471120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005944\|Ga0066788_10100294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300005952\|Ga0080026_10013348	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300005952\|Ga0080026_10134193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005994\|Ga0066789_10379271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300006172\|Ga0075018_10198499	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300006176\|Ga0070765_101574089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300006423\|Ga0075039_1245156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300006426\|Ga0075037_1440019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300006893\|Ga0073928_10005553	All Organisms → cellular organisms → Bacteria	17595	Open in IMG/M
3300006893\|Ga0073928_10008015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13424	Open in IMG/M
3300006893\|Ga0073928_10011304	All Organisms → cellular organisms → Bacteria	10429	Open in IMG/M
3300006893\|Ga0073928_10049858	All Organisms → cellular organisms → Bacteria	3786	Open in IMG/M
3300006893\|Ga0073928_10142190	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300006893\|Ga0073928_10734873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300006893\|Ga0073928_10938115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300006893\|Ga0073928_11244722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300010341\|Ga0074045_10749619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300010359\|Ga0126376_11065313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300010866\|Ga0126344_1232148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300010876\|Ga0126361_10150182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300010876\|Ga0126361_11304742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300011120\|Ga0150983_13612933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300012582\|Ga0137358_10861815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300012924\|Ga0137413_10455909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300012925\|Ga0137419_11092963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300013503\|Ga0120127_10065078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300013832\|Ga0120132_1050029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300014501\|Ga0182024_10000274	All Organisms → cellular organisms → Bacteria → Acidobacteria	129866	Open in IMG/M
3300015089\|Ga0167643_1061200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300015193\|Ga0167668_1005370	All Organisms → cellular organisms → Bacteria	2860	Open in IMG/M
3300019887\|Ga0193729_1004259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6944	Open in IMG/M
3300019887\|Ga0193729_1015746	All Organisms → cellular organisms → Bacteria	3339	Open in IMG/M
3300019887\|Ga0193729_1021761	All Organisms → cellular organisms → Bacteria → Acidobacteria	2773	Open in IMG/M
3300019888\|Ga0193751_1003071	All Organisms → cellular organisms → Bacteria	9924	Open in IMG/M
3300019890\|Ga0193728_1002987	All Organisms → cellular organisms → Bacteria	8616	Open in IMG/M
3300019890\|Ga0193728_1006417	All Organisms → cellular organisms → Bacteria	5945	Open in IMG/M
3300020021\|Ga0193726_1000351	All Organisms → cellular organisms → Bacteria	53050	Open in IMG/M
3300020579\|Ga0210407_10825136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300020579\|Ga0210407_10939003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300020579\|Ga0210407_11160850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300020583\|Ga0210401_11357687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300021168\|Ga0210406_10653748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300021170\|Ga0210400_10785699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300021178\|Ga0210408_10013164	All Organisms → cellular organisms → Bacteria	6777	Open in IMG/M
3300021180\|Ga0210396_10509415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300021404\|Ga0210389_10440735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300021432\|Ga0210384_10611715	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300021477\|Ga0210398_11064123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300021478\|Ga0210402_10011861	All Organisms → cellular organisms → Bacteria	7510	Open in IMG/M
3300021479\|Ga0210410_10911858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300022557\|Ga0212123_10004059	All Organisms → cellular organisms → Bacteria	28822	Open in IMG/M
3300022557\|Ga0212123_10015511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9477	Open in IMG/M
3300022557\|Ga0212123_10015687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9382	Open in IMG/M
3300022557\|Ga0212123_10058536	All Organisms → cellular organisms → Bacteria	3438	Open in IMG/M
3300022557\|Ga0212123_10426590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300023056\|Ga0233357_1023877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300025544\|Ga0208078_1027646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1259	Open in IMG/M
3300026215\|Ga0209849_1038713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300026291\|Ga0209890_10041718	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300026294\|Ga0209839_10072710	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300026467\|Ga0257154_1037955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300027521\|Ga0209524_1029696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300027562\|Ga0209735_1003495	All Organisms → cellular organisms → Bacteria	2819	Open in IMG/M
3300027562\|Ga0209735_1018569	All Organisms → cellular organisms → Bacteria → Acidobacteria	1409	Open in IMG/M
3300027562\|Ga0209735_1049646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300027565\|Ga0209219_1004989	All Organisms → cellular organisms → Bacteria	2839	Open in IMG/M
3300027583\|Ga0209527_1076172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300027591\|Ga0209733_1027637	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300027591\|Ga0209733_1082294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300027603\|Ga0209331_1088990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300027635\|Ga0209625_1057495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300027660\|Ga0209736_1058669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300027660\|Ga0209736_1169900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300027667\|Ga0209009_1006163	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300027667\|Ga0209009_1009902	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300027674\|Ga0209118_1057645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300027681\|Ga0208991_1235474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300027701\|Ga0209447_10011960	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300027727\|Ga0209328_10152549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300027768\|Ga0209772_10146385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300027908\|Ga0209006_10592539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300028047\|Ga0209526_10449457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300030991\|Ga0073994_12218838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300031057\|Ga0170834_100311573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300031057\|Ga0170834_107545409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300031057\|Ga0170834_111547328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300031231\|Ga0170824_108708071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300031718\|Ga0307474_10131230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1884	Open in IMG/M
3300031754\|Ga0307475_10077507	All Organisms → cellular organisms → Bacteria	2554	Open in IMG/M
3300031754\|Ga0307475_10141409	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300031754\|Ga0307475_10467259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300031962\|Ga0307479_10046863	All Organisms → cellular organisms → Bacteria	4154	Open in IMG/M
3300031962\|Ga0307479_11107324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.86%
Aquatic	Environmental → Aquatic	17.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.86%
Thermal Springs	Environmental → Aquatic → Thermal Springs	12.38%
Freshwater	Environmental → Aquatic → Freshwater	3.81%
Sediment	Environmental → Aquatic → Sediment	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.81%
Loam	Environmental → Terrestrial → Soil → Loam	27.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	12.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	26.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.19%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	12.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	25.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.24%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	12.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.71%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.86%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001181	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006423	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_056 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_01893280	2199352024	Soil	MRGHIVNQEEHQQLQQALKFVTVRRAAVLLGISEEELLRISSESGFGHAETADGHGDACFTYEELRQICVLSVNTVH
JGI12695J13573_10036141	3300001180	Forest Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH*
JGI12663J13571_1021531	3300001181	Forest Soil	MRRDTINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH*
JGI12635J15846_105899331	3300001593	Forest Soil	MRRNAINEEHSQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH*
JGI12635J15846_107454102	3300001593	Forest Soil	MKRTSINAEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTYFTYEELRQICVLSVNTIH*
JGIcombinedJ26739_1001402872	3300002245	Forest Soil	MRRNAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLAVNTIH*
JGIcombinedJ26739_1004305722	3300002245	Forest Soil	MRRDTINEEHQQLQQALKFVTTRRAAVXLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH*
JGIcombinedJ26739_1008346621	3300002245	Forest Soil	KALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLSVNTVH*
Ga0062385_101262232	3300004080	Bog Forest Soil	MNGQELKFVTHRRAALLLGISESELSRISSETGYGLHEHAGEEDETFFTYEELRQICVLSVTTVH*
Ga0062389_1020204641	3300004092	Bog Forest Soil	MNMNGQELKFVTHRRAALLLGISESELSRISSETGYGLHEHAGEEDETFFTYEELRQICVLSVTTVH*
Ga0070709_101902853	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRNAINAEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTFFTYEELRQICVLSVNTIH*
Ga0075035_14711202	3300005640	Permafrost Soil	MSSQGLFQDYQPVALKFVTTRRAALLLGISEGEILRISDETGLGQREVAGKEEETFFTYEELRKICELTAQTIH*
Ga0066788_101002941	3300005944	Soil	MRQRDQQMEEHRQLQNALKFVTTRRAAVLLGISEEELRRISHESGFGHTEVAGENEDTFFTYEELRQICVLSVNTVH*
Ga0080026_100133484	3300005952	Permafrost Soil	MRGNVVNQEEHRQLQQALKFVTVRRAAVLLGISEDELLRISSESGFGHTETADGHEDTYFTYEELRQICVLSVNTVH*
Ga0080026_101341931	3300005952	Permafrost Soil	MSRNREQQENQELHQALKFVTVRRAAVLLGISVDELRRISHESGFGHTEKAGGSEDTFFTYEELRQICVLSVHTVH*
Ga0066789_103792713	3300005994	Soil	MSHRDQQMEEHRQLQNALKFVTTRRAAVLLGISEEELRRISHESGFGHTEVAGENEDTFFTYEELRQICVLSVNTVH*
Ga0075018_101984993	3300006172	Watersheds	MKNQDLKFVTTRRAAVLLGMSESELRQISSESGFGLTEHAGEQEETFFTYEELRQICQLAVQTVH*
Ga0070765_1015740892	3300006176	Soil	MRRDAINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH*
Ga0075039_12451562	3300006423	Permafrost Soil	MSSQGLFQDYQPVALKFVTTRRAALLLGISEGEILRISDETGLGQREVAGKQEDTFFTYEELRKIGELSMQTIH*
Ga0075037_14400192	3300006426	Permafrost Soil	MNHNREQQENQELHQALKFVTVRRAAVLLGISVDELRRISHESGFGHTEKAGGSEDTYFTYEELRQICVLSVHTVH*
Ga0073928_1000555322	3300006893	Iron-Sulfur Acid Spring	MKRTAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTFFTYEELRQICVLSVNTIH*
Ga0073928_100080157	3300006893	Iron-Sulfur Acid Spring	MRRNAINDEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH*
Ga0073928_1001130411	3300006893	Iron-Sulfur Acid Spring	MKRTAINTEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH*
Ga0073928_100498581	3300006893	Iron-Sulfur Acid Spring	MKRTSINAEHNQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTYFTYEELRQICVLSVNTIH*
Ga0073928_101421901	3300006893	Iron-Sulfur Acid Spring	MKRTAINAEHNQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTFFTYEELRQICVLSVNTIH*
Ga0073928_107348732	3300006893	Iron-Sulfur Acid Spring	MRRNATNEEHSQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH*
Ga0073928_109381153	3300006893	Iron-Sulfur Acid Spring	MKRNAINAEHNQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTFFTYEELRQICVLSVNTIH*
Ga0073928_112447221	3300006893	Iron-Sulfur Acid Spring	MKRTAINAEHQELQQALKFVTTRRAAVLLGISEEELRRISHETGFGRTEMAGGEEDTYFTYEEQRQICVLSV
Ga0074045_107496192	3300010341	Bog Forest Soil	MRTMNMNGQELKFVTHRRAALLLGISESELSRISSETGYGLHEHAGEEDETFFTYEELRQICVLSVTTVH*
Ga0126376_110653131	3300010359	Tropical Forest Soil	MNNQELKYVTTRRAAVLLGMSESELRQISSDSGFGHTERAGDEEETFFTYEELRQICQLAVQTVH*
Ga0126344_12321482	3300010866	Boreal Forest Soil	MKRTAINEEHRQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLAVNTVH*
Ga0126361_101501822	3300010876	Boreal Forest Soil	MRRDAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEAVGGEEDTYFTYEELRQICVLSVNTIH*
Ga0126361_113047422	3300010876	Boreal Forest Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH*
Ga0150983_136129332	3300011120	Forest Soil	MNMNSQELKYVTHRRAALLLGISESELIRISSESGVGHRERAGNEEETFFTYEELRQICVLAVNTVH*
Ga0137358_108618151	3300012582	Vadose Zone Soil	MKRNAINAEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTFFTYEELRQICVLSVNTVH*
Ga0137413_104559091	3300012924	Vadose Zone Soil	MRGHIVNQEEHQQLQQALKFVTVRRAAVLLGISEEELVRISSESGFGHTETADGHEDTFFTYEELRQICVLSVNTVH*
Ga0137419_110929632	3300012925	Vadose Zone Soil	VNQEEHQQLQQALKFVTVRRAAVLLGISEEELVRISSESGFGHTETADGHEDTFFTYEELRQICVLSVNTVH*
Ga0120127_100650782	3300013503	Permafrost	MSHRDQQMEEHRQLQNALKFVTTRRAAVLLGISEEELRRISHESGFGHTEVAGESEDTFFTYEELRQICVLSVNTVH*
Ga0120132_10500291	3300013832	Permafrost	MSHRDQQMDEHRQLQNALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH*
Ga0182024_100002745	3300014501	Permafrost	MRRNAINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGDEEDTYFTYEELRQICVLSVNTIH*
Ga0167643_10612002	3300015089	Glacier Forefield Soil	MKRTSSTAEHQQLQQTLKFVTTRRAAVLLGISEDELRRISHESGFGRTEMAGDEEDTYFTYEELRQICVLSVNTIH*
Ga0167668_10053701	3300015193	Glacier Forefield Soil	MRRDAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEAAGGEEDTYFTYEELRQICVLSVNTIH*
Ga0193729_10042596	3300019887	Soil	MRRNAISEEHHQLQKALKFVTTRRAAVLLGISEQELRRISHESGFGRTEIADGEEDTYFTYEELRQICVLAVNTVH
Ga0193729_10157461	3300019887	Soil	MKRTAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDTFFTYEELRQICVLSVNTIH
Ga0193729_10217611	3300019887	Soil	MKRNAINAEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTFFTYEELRQICVLSVNTVH
Ga0193751_10030719	3300019888	Soil	MKRTAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTFFTYEELRQICVLSVNTIH
Ga0193728_10029876	3300019890	Soil	MKRTASTAEHQQLQQTLKFVTTRRAAVLLGISEEELRRISHESGFGRTELAGGEEDTYFTYEELRQICVLSVNTIH
Ga0193728_10064176	3300019890	Soil	MRRNAISEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTEIADGEEDTYFTYEELRQICVLAVNTVH
Ga0193726_100035145	3300020021	Soil	MNRNREQLENQELHQALKFVTVRRAAVLLGISVDELRRISHESGFGHTEKAGGSEDTFFTYEELRQICVLSVHTIH
Ga0210407_108251361	3300020579	Soil	MNSQELKYVTHRRAALLLGISESELIRISSETGFGHRERAGEEEETFFTYEELRQICVLAVNTVH
Ga0210407_109390031	3300020579	Soil	MKNRDSKQELKYVTRRRAAVLLGMSETELLQISSESGFGRTEHAGDQEETFFTYEELRQICQLAVQTVH
Ga0210407_111608501	3300020579	Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGEEEDIFFTYEELRQICVLSVNTVH
Ga0210401_113576871	3300020583	Soil	MNSQELKYVTHRRAALLLGISESELIRISSESGVGHRERAGNEEETFFTYEELRQICVLAVNTVH
Ga0210406_106537481	3300021168	Soil	MRRDAINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH
Ga0210400_107856991	3300021170	Soil	MRRDAINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEEL
Ga0210408_100131642	3300021178	Soil	MKNQDLKFVTTRRAAVLLGMSESELRQISSESGLGLTERAGEQEETFFTYEELRQICQLAVQTVH
Ga0210396_105094152	3300021180	Soil	MKRTAINEEHQQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEKDIFFTYEELRQICVLAVNTVH
Ga0210389_104407353	3300021404	Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGEEEDIFFTYEELRQICVL
Ga0210384_106117152	3300021432	Soil	MKNQDLKFVTTRRAAVLLGMSESELRQISSESGLGLTEHAGEQEETFFTYEELRQICQLAVQTVH
Ga0210398_110641232	3300021477	Soil	MNSQELKYVTHRRAALLLGISESELIRISSETGFGHRERAGNEEETFFTYEELRQICVLAVNTVH
Ga0210402_100118616	3300021478	Soil	MKNQDLKFVTTRRAAVLLGMSESELRQISSESGFGLTEHAGEQEETFFTYEELRQICQLAVQTVH
Ga0210410_109118582	3300021479	Soil	MKRTAINEEHQQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEKDIFFTYEELRQICVLA
Ga0212123_1000405926	3300022557	Iron-Sulfur Acid Spring	MKRTAINTEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH
Ga0212123_100155113	3300022557	Iron-Sulfur Acid Spring	MRRNAINDEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0212123_100156872	3300022557	Iron-Sulfur Acid Spring	MKRTAINAEHNQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTFFTYEELRQICVLSVNTIH
Ga0212123_100585361	3300022557	Iron-Sulfur Acid Spring	MKRTSINAEHNQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTYFTYEELRQICVLSVNTIH
Ga0212123_104265902	3300022557	Iron-Sulfur Acid Spring	EEHSQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0233357_10238771	3300023056	Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0208078_10276463	3300025544	Arctic Peat Soil	MRRDAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEAAGDEEDTYFTYEELRQICVLSVNTIH
Ga0209849_10387131	3300026215	Soil	MRQRDQQMEEHRQLQNALKFVTTRRAAVLLGISEEELRRISHESGFGHTEVAGENEDTFFTYEELRQICVLSVNTVH
Ga0209890_100417181	3300026291	Soil	MRQRDQQMEEHRQLQNALKFVTTRRAAVLLGISEEELRRISHESGFGHTEVAGENEDTFFTYEELRQICVLSVN
Ga0209839_100727103	3300026294	Soil	MRQRDQQMEEHRQLQNALKFVTTRRAAVLLGISEEELRRISHESGFGHTEVAGENEDTFFTYEELRQICVLS
Ga0257154_10379552	3300026467	Soil	MRRDTINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH
Ga0209524_10296962	3300027521	Forest Soil	MRRNAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLAVNTIH
Ga0209735_10034951	3300027562	Forest Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH
Ga0209735_10185691	3300027562	Forest Soil	GGVMRRNAINEENHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0209735_10496461	3300027562	Forest Soil	MKRTSINAEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTYFTYEELRQICVLSVNTIH
Ga0209219_10049891	3300027565	Forest Soil	MRRNAINEEHSQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0209527_10761721	3300027583	Forest Soil	FTFRIKGGVMRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGEEEDIFFTYEELRQICVLSVNTVH
Ga0209733_10276372	3300027591	Forest Soil	QKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0209733_10822943	3300027591	Forest Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAV
Ga0209331_10889901	3300027603	Forest Soil	MRRDTINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLAVNTIH
Ga0209625_10574951	3300027635	Forest Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVL
Ga0209736_10586692	3300027660	Forest Soil	MRRNAISEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLAVNTIH
Ga0209736_11699001	3300027660	Forest Soil	MRRNAINEENHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0209009_10061631	3300027667	Forest Soil	MRRNAINEEDHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0209009_10099023	3300027667	Forest Soil	MRRDAINEEHQQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEAAGDEEDTYFTYEELRQICVLSVNTIH
Ga0209118_10576451	3300027674	Forest Soil	MRRNAINEEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH
Ga0208991_12354742	3300027681	Forest Soil	MRNDGMNGQEQHQALQQALKFVTTRRAAVLLGISEEELRRISHETGFGHTEVAGDREDTYFTYEELRQICVLSVNTVH
Ga0209447_100119603	3300027701	Bog Forest Soil	MNGQELKFVTHRRAALLLGISESELSRISSETGYGLHEHAGEEDETFFTYEELRQICVLSVTTVH
Ga0209328_101525492	3300027727	Forest Soil	MKRTAINAEHQELQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTYFTYEELRQICVLSVNTIH
Ga0209772_101463851	3300027768	Bog Forest Soil	NMNGQELKYVTHRRAALLLGISEGELSRISSETGYGRHEHAGEEDETFFTYEELRQICVLAVSTVH
Ga0209006_105925391	3300027908	Forest Soil	MRRNAISEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLSVNTVH
Ga0209526_104494571	3300028047	Forest Soil	QALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLSVNTVH
Ga0073994_122188381	3300030991	Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHETGFGHTEVAGDREDTYFTYEELRQICVLSVNT
Ga0170834_1003115731	3300031057	Forest Soil	MKNQDLKFVTTRRAAVLLGMSENELRQLSSESGLGLTEQAGDQEETFFTYEELRQICQLAVQTVH
Ga0170834_1075454091	3300031057	Forest Soil	MRRNAMNEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLSVNTVH
Ga0170834_1115473281	3300031057	Forest Soil	NEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0170824_1087080712	3300031231	Forest Soil	MRRNATNEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRAESAGGEEDIFFTYEELRQICVLAVNTVH
Ga0307474_101312303	3300031718	Hardwood Forest Soil	IQIDDHDGGTRFHGFTFRIKGGVMRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTFFTYEELRQICVLAVNTIH
Ga0307475_100775073	3300031754	Hardwood Forest Soil	MRRNAINEEHHQLQKALKFVTTRRAAVLLGISEEELRRISHESGFGRTEIADGEEDTYFTYEELRQICVLSVNTVH
Ga0307475_101414091	3300031754	Hardwood Forest Soil	MKRTSINAEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTETAGGEEDTFFTYEELRQICVLSVNTVH
Ga0307475_104672592	3300031754	Hardwood Forest Soil	MKRNAINAEHNQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTFFTYEELRQICVLSVNTIH
Ga0307479_100468633	3300031962	Hardwood Forest Soil	MKRNAINTEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEMAGGEEDTFFTYEELRQICVLSVNTIH
Ga0307479_111073242	3300031962	Hardwood Forest Soil	MKRIAINAEHHQLQQALKFVTTRRAAVLLGISEEELRRISHESGFGRTEIAGGEEDTFFTYEELRQICVLSVNTVH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096001

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences