Basic Information | |
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Family ID | F095698 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 51 residues |
Representative Sequence | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVRKIGVIIE |
Number of Associated Samples | 65 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 84.76 % |
% of genes near scaffold ends (potentially truncated) | 21.90 % |
% of genes from short scaffolds (< 2000 bps) | 70.48 % |
Associated GOLD sequencing projects | 59 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (76.190 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (24.762 % of family members) |
Environment Ontology (ENVO) | Unclassified (32.381 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (33.333 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 38.46% β-sheet: 3.85% Coil/Unstructured: 57.69% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Sediment Freshwater Sediment Wetland Freshwater Lake Sediment Freshwater Freshwater Lake Sediment Lake Sediment Peatland Freshwater Wetlands Freshwater Wetlands Freshwater Lake Sediment Hot Spring Soil Soil Soil Peatland Tropical Peatland Peat Soil Hydrocarbon Resource Environments Enrichment Culture |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
Draft_100816412 | 3300001580 | Hydrocarbon Resource Environments | MRIFLESEEFWFEDFKVDNLTAAISQLKALHRDCKESFKEDGIVRKIGIIIE* |
Draft_102753142 | 3300001580 | Hydrocarbon Resource Environments | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVRKIGVIIE* |
LO132_100673911 | 3300002465 | Freshwater Lake | MRIFLESEEYWFEDFKVDNLTQAISELKALYRNCKESFKEDGIVRKIGVIIE* |
Ga0031653_101442562 | 3300003859 | Freshwater Lake Sediment | ESEEYWFEDFKVDNLTQAISELKALYRNCKESFKEDGIVRKIGVIIE* |
Ga0069718_100184783 | 3300004481 | Sediment | MRIFLESEEYWFEDFKVDNLTEAISELKALYRDCKECFKEDGIVRKIGVIIE* |
Ga0068714_100136608 | 3300005254 | Enrichment Culture | MRIFLESEEFWFEDFKVDNLTAAISQLKALYRDCKDSFKEDGIVRKIGIIIE* |
Ga0079037_1003146202 | 3300006224 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLTEAISKLKVLYRDCKDCFKEDGIVRKIGVIIE* |
Ga0079037_1022964952 | 3300006224 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVRKIGVI |
Ga0105095_100062135 | 3300009053 | Freshwater Sediment | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIDRKIGVIIE* |
Ga0105106_101924102 | 3300009078 | Freshwater Sediment | MRIFLESEEYWFEDFKVDNLTDAISELKALYRDCKESFKEDGIVRKIGVIIE* |
Ga0105107_101953792 | 3300009087 | Freshwater Sediment | VGEKMRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIDRKIGVIIE* |
Ga0115026_113996751 | 3300009111 | Wetland | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCEECFKEDGIVRKIGLIIE* |
Ga0105094_101010162 | 3300009153 | Freshwater Sediment | VGEKMRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVRKIGVIIE* |
Ga0105094_108288021 | 3300009153 | Freshwater Sediment | MRIFLESEEYWFEDFKVDNLTQAISELKALYRHCKESFKEDGIVRKIGVIIE* |
Ga0113563_102346044 | 3300009167 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLTEAISKLKALYLDCKECFKEDGIVRKIGVIIE* |
Ga0105101_102318732 | 3300009171 | Freshwater Sediment | MRIFLESEEYWFEDFKVDNLTQAISELRALYRDCKESFKEDGIVRKIGVIIE* |
Ga0116210_10364691 | 3300010288 | Hot Spring | MRIFLESEEFWFEDFKVDNLMEAISKLKALYRDCRECFKEDRIVRKIGIIIE* |
Ga0129297_104325612 | 3300010324 | Lake Sediment | MRIFLESEEYWFEDFKVDNLTQAISQLKALYRDCKESFKEDGIVRNIGIIIE* |
Ga0129297_104581582 | 3300010324 | Lake Sediment | MRIFLESEEYWFEDFKVDNLTQAIYELKALYRDCKESFKEDGIVRKIGIIIE* |
Ga0153915_102215462 | 3300012931 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLTQAISELRALYRDCKESFKEDAIVRKIGVIIE* |
Ga0153915_103932013 | 3300012931 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKECFKEDGIVRKIGIVIE* |
Ga0153915_121900771 | 3300012931 | Freshwater Wetlands | KMRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKECFKEDGIVRKIGVIIE* |
Ga0153915_125946141 | 3300012931 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLRQAISELKTLYRDCKESFKEDGIVRKIGVIIE* |
Ga0153915_132974161 | 3300012931 | Freshwater Wetlands | KMRIFLESEEYWFEDFKVDNLTEAISKLKALYRDCRECFKEDGIVRKIGVIIE* |
Ga0153916_109104312 | 3300012964 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLAQAISELKALYRDCKESFKEDGIVRKIGVIIE* |
Ga0153916_116975682 | 3300012964 | Freshwater Wetlands | MRIFLESEEYWFEDFKADNLTQAISELKALYRDCKECFKEDGIVRKIGVIIE* |
Ga0153916_118505402 | 3300012964 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLTEAISKLKALYRDCKECFKEDGIVRKIGVIIE* |
Ga0153916_122420982 | 3300012964 | Freshwater Wetlands | MRIFLESEEYWFEDFKVDNLTQAISELRALYRDCKE |
Ga0187775_100724182 | 3300017939 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLTQAISELKTLFRNCKECFKEDGIVRKIGIIIE |
Ga0187775_101946762 | 3300017939 | Tropical Peatland | MRIFLESDEFWFEDFKVDNLTEAISELKTLYRNCKECFK |
Ga0187778_100338022 | 3300017961 | Tropical Peatland | MRIFLESEEYWFEDFKVDNLTEAISELKTLYRNCKECFKEDGIVRKIGIIIE |
Ga0187778_110827002 | 3300017961 | Tropical Peatland | MRIFLESEEYWFEDFKVDNLREAVSELKTLYRNCKECFKEDGI |
Ga0187776_101318352 | 3300017966 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLTQAISELKTLFRNCKECFKEDGVVRKIGIIIE |
Ga0187776_104780981 | 3300017966 | Tropical Peatland | MRIFLESEVYWFEDFKVDNLAEAISELKILYRNCKECFKEDGIARKIGIIIE |
Ga0187780_100028057 | 3300017973 | Tropical Peatland | MRIFLESEEYWFENFRVDNLTQAISELKILYRNCKECFKEDGIVRKIGIIIE |
Ga0187780_103183281 | 3300017973 | Tropical Peatland | WFEDFKVDNLREAISELKTLYKNCSECFKEDGIVRKIGIIIE |
Ga0187780_103675142 | 3300017973 | Tropical Peatland | FVSLVLFLRKGWKMRIFLESEEYWFEDFKVDNLREAVSELKTLYRNCKECFKEDGIVRKIGIIME |
Ga0187865_11285692 | 3300018004 | Peatland | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVRKIGVIIE |
Ga0187787_100855222 | 3300018029 | Tropical Peatland | MRIFLESEEYWFEDFKVDDLTEAISTLKALYRDCKECFKEDGIVRKIGILIE |
Ga0187787_101964872 | 3300018029 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLTQAIPELKTLYRNCKESFKEDGIVRKIGIIIE |
Ga0187788_100055222 | 3300018032 | Tropical Peatland | MRIFLESEEYWFEDFKVDNLTQAISELKTLFRNCKECFKEDGIVRKIGIIIE |
Ga0187788_100859512 | 3300018032 | Tropical Peatland | MRIFLESEEYWFEDFKVDNLTEAISKLKALYRDCRECFKEDGIARKIGIIIE |
Ga0187766_101248203 | 3300018058 | Tropical Peatland | MRIFLESEEYWFENFRVDNLTQAISELKILYRNCKQCFKEDGIVRKIGIIIE |
Ga0187784_100183258 | 3300018062 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLTQAISELKTLYRDCKEAFKEDGVVRKIGIIVEQYRA |
Ga0187784_100842782 | 3300018062 | Tropical Peatland | MRIFLESQEFWFEDFKVDNLTEAISELKTLYRNCKECFKEDAIVRKIGIIIE |
Ga0187784_104311552 | 3300018062 | Tropical Peatland | MRIFLESEEYWFENFKVDNLTQAISELKILYRNCKECFKEDGIVRKIGIIIE |
Ga0187773_100805023 | 3300018064 | Tropical Peatland | MRIFLESEEYWFEDFKVDNLTEAISKLKALYRDCKECFKEDGIARKIGIIIE |
Ga0187773_104210541 | 3300018064 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLTQAISELQALYRECKECFKEDGFVRKIGIIIE |
Ga0187769_100988853 | 3300018086 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLREAISELKTLYRNCKECFKEDGIIHKIGIIIE |
Ga0187771_100210145 | 3300018088 | Tropical Peatland | MRIFLESEEYWFEDFTVDNLTEATSKLKALYRDCKEYFKEDGIARKIGIIIE |
Ga0187771_101244853 | 3300018088 | Tropical Peatland | MRIFLESEEYWFEDFKVDNLTQAMSELKTLYRNCKESFKEDGIVRKIGIIIE |
Ga0187771_104673132 | 3300018088 | Tropical Peatland | FLESEEFWFEDFKVDNLTQAISELKTLYRNCKECFEEDGIPRRIGIIIE |
Ga0187771_109071502 | 3300018088 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLTEAISELKTLYRNCKECFKEDGIVRKIGIIIE |
Ga0187774_107241692 | 3300018089 | Tropical Peatland | MRIFLESEEYWFEDFKVDNLTQAISELKSLYRDCKESFKEDGIVRKIGVIIE |
Ga0187770_112821031 | 3300018090 | Tropical Peatland | MRIFLESEEFWFEDFKVDNLRGAISELKTLYRNCKECFKEDGIARKIGII |
Ga0194111_103060531 | 3300020083 | Freshwater Lake | SGEMRIFLESDEYWFEDFKVDNLKEAISELKALHRDCKEAFKEDGIVRKIGIIVE |
Ga0194111_106528723 | 3300020083 | Freshwater Lake | MRIFLESEEYWFEDFKVDNLMEAISKLKALYGDCKECFKEDGIVRKIGIIIE |
Ga0194110_100606884 | 3300020084 | Freshwater Lake | MRIFLESDEYWFEDFKVDNLKEAISELKALHRDCKEAFKEDGIVRKIGIIVE |
Ga0194110_102354564 | 3300020084 | Freshwater Lake | MRIFLESEEYWFEDFKVDNLMEAISKLKALYQDCKEAFKEDGIARKVGIIIE |
Ga0194125_108029111 | 3300020222 | Freshwater Lake | FLESDEYWFEDFKVDNLKEAISELKALHRDCKEAFKEDGIVRKIGIIVE |
Ga0224495_104272842 | 3300022208 | Sediment | MRIFLESEEYWFEDFKVDNLSEAISELKALYRDCKECFEEDGIVRKIGIIIE |
Ga0212089_105208052 | 3300022551 | Lake Sediment | MRIFLESEEYWFEDFKVDNLTQAIYELKALYRDCKESFKEDGIVRKIGIIIE |
(restricted) Ga0233423_101828492 | 3300023177 | Freshwater | VRIFLESEEYWFEDFKVDNLTDAISKLKALYRDCKECFKEDGIARKIGIVIE |
Ga0209721_10334871 | 3300025104 | Hot Spring | MRIFLESEEFWFEDFKVDNLMEAISKLKALYRDCRECFKEDRIVRKIGIIIE |
Ga0209164_100074147 | 3300027690 | Enrichment Culture | MRIFLESEEFWFEDFKVDNLTAAISQLKALYRDCKDSFKEDGIVRKIGIIIE |
Ga0209703_12330021 | 3300027723 | Freshwater Sediment | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIDRKIGVIIE |
Ga0209592_10306852 | 3300027731 | Freshwater Sediment | MRIFLESEEYWFEDFKVDNLTQAISELRALYRDCKESFKEDGIVRKIGVIIE |
Ga0209592_10467441 | 3300027731 | Freshwater Sediment | KMRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIDRKIGVIIE |
Ga0256868_103975431 | 3300027811 | Soil | MRIFLESEEYWFEDFRVDNLTQAISELKALYRDCKECFKEDGIVRKIGVIIE |
Ga0209293_103681782 | 3300027877 | Wetland | MRIFLESEEYWFEDFKVDNLTEAISKLKVLYRDCKDCFKEDGIVRKIGVIIE |
Ga0209253_100080885 | 3300027900 | Freshwater Lake Sediment | MRIFLESEEYWFEDFKVDNLTQAISELKALYRHCKESFKEDGIVRKIGVIIE |
Ga0299915_106451011 | 3300030613 | Soil | MRIFLESEEYWFEDFRVDNLTQAISELKALYRDCKECFKEDGI |
(restricted) Ga0315308_13353981 | 3300031587 | Sediment | MRIFLESEEYWFEDFKVDNLTQAICELKALYQDCKECFKEDGIV |
Ga0315291_111590451 | 3300031707 | Sediment | MRIFLESEEYWFEDFKVDNLTQAISELKALYRNCKESFKEDGIVRKIGVIIE |
(restricted) Ga0315306_101173791 | 3300031806 | Sediment | FEQGGEKMRIFLESEEYWFEDFKVDNLTQAISELKTLYRNCKECFKEDGIVRKIGIIIE |
(restricted) Ga0315306_103336532 | 3300031806 | Sediment | MRIFLESEEYWFEDFKVDNLTQAICELKALYQDCKECFKEDGIVRKIGVIIE |
(restricted) Ga0315310_101773951 | 3300031876 | Sediment | MRIFLESEEYWFEDFKVDNLSEAISELRALYRDCRE |
(restricted) Ga0315310_102698902 | 3300031876 | Sediment | MRIFLESEEYWFEDFKVDNLTQAISELKTLYRNCKECFKEDGI |
(restricted) Ga0315314_10212673 | 3300031877 | Sediment | MRIFLESEEYWFEDFKVDNLRQAISELKALYRDCRECFKEDGIVRKIGIIIE |
Ga0335085_101180034 | 3300032770 | Soil | MRIFLESEEYWFEDFKVDSLPQAISELKALYRNCKECFKEDGIVRKIGIIIE |
Ga0335070_1000007168 | 3300032829 | Soil | MRIFLESEEYWFEEFKVDNLTEAISELKTLYRNCKECFKEDGIARKIGIIIE |
Ga0335070_100224824 | 3300032829 | Soil | VLFLRKGVKKMRIFLKSEVYWFEDFKVDNLTQAISELKTLYRNCKECFKEDGIVRKIGVIIE |
Ga0335070_100545171 | 3300032829 | Soil | MRIFLESEEFWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVRKIGVIIE |
Ga0335070_101290634 | 3300032829 | Soil | MRIFLESEVYWFEDFKVDNLTEAISELKTLYRNCKEC |
Ga0335081_101455911 | 3300032892 | Soil | MRIFLESEEFWFEDFKVDNLTQAISELKTLYRNCKECFKEDGIARKIGIIIE |
Ga0335081_101588432 | 3300032892 | Soil | MRIFLESEEYWFEDFKVDNLTQAISELKTLYRNCKEAFEEDGVVRKIGVIIE |
Ga0326728_100043058 | 3300033402 | Peat Soil | MRIFLESEEYWFEDLKVENLTQAISELKALYRNCKEAFEEDGVVRKIGVIIE |
Ga0316603_106419253 | 3300033413 | Soil | MRIFLESEEYWFKDFRVDNLTQAISELKALYRDCKECFKDDGIVRKIGIIIE |
Ga0326726_1001239210 | 3300033433 | Peat Soil | MRIFLESEEFWFEDFKVDNLTEAISKLKALYRDCKECFKEDGIARKIGIIIE |
Ga0326726_100645963 | 3300033433 | Peat Soil | MRIFLESEEYWFEDFKVDNLTQAISELKTLYRNCKEAFKEDGVVRKIGVIIE |
Ga0316620_100801703 | 3300033480 | Soil | MRIFLESEEYWFEDFKVDNLTQAISELRALYRDCKESFKEDGIIRKIGVIIE |
Ga0316624_115369422 | 3300033486 | Soil | MRIFLESEEYWFEDFKVDNLRQAISELKALYRDCEECFKEDGIVRKIGVIIE |
Ga0299912_100377537 | 3300033489 | Soil | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGVVRKIGVIIE |
Ga0316628_1000380593 | 3300033513 | Soil | MRIFLESEEYWFEDFKVDNLAQAISELRALYRDCEECFKEDGIVRKIGLIIE |
Ga0316628_1004511442 | 3300033513 | Soil | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKECFKEDGIVRKIGIVIE |
Ga0316628_1007214662 | 3300033513 | Soil | VFKEGGEKVRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVRKIGVIIE |
Ga0316628_1022300812 | 3300033513 | Soil | FLESEEFWFEDFKVDNLTQAISELKALYRDCKECFKEDGIVRKIGVIIE |
Ga0316628_1029825461 | 3300033513 | Soil | MRIFLESEEYWFEDFKVHNLTEAISKLKALYRDCKECLKEDGIARKIGIIIE |
Ga0316628_1043910931 | 3300033513 | Soil | MRIFLESEEYWFEDFKVDNLTQAISELKALYRDCKESFKEDGIVSKIGVIIE |
Ga0314863_022888_895_1053 | 3300033804 | Peatland | MRIFLESEEFWFEDFKVDNLTQAISELKTLYRNCKEAFKEDGVVRKIGVIIE |
Ga0314866_045866_124_282 | 3300033807 | Peatland | MRIFLESEEFWFEDFKVDSLTQAISELKALYRDCKECLKEDGIVRKIGIVIE |
Ga0314861_0037388_2027_2185 | 3300033977 | Peatland | MRIFLESEEFWFEDFKVDNLTEAISELKTLYRNCKECFKEDAIVRKIGIIIE |
Ga0334965_0133933_573_731 | 3300033991 | Sediment | MRIFLESEEYWFEDFKVDNLTEAISELKALYRDCKECFKEDGIVRKIGVIIE |
Ga0334965_0351775_177_344 | 3300033991 | Sediment | MRIFLESEEYWFEDFKVDNLKEAISQLKTLYRNCKESFKEDGIVRKIGIIIEIIE |
Ga0326723_0346272_2_178 | 3300034090 | Peat Soil | KERGGKMRIFLESEEYWFEDFKVDNLTEAISKLKALYRDCRESFKEDGIVRKIGVIIE |
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