Metagenome / Metatranscriptome Family F095440

Basic Information
Family ID	F095440
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	53 residues
Representative Sequence	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQP
Number of Associated Samples	95
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.38 %
% of genes near scaffold ends (potentially truncated)	60.00 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Most Common Taxonomy
Group	Bacteria (61.905 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.952 % of family members)
Environment Ontology (ENVO)	Unclassified (30.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.905 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d4iwka_	4iwk	0.92417
f.14.1.4: TRPM-like (melastatin-like transient receptor potential) channels	d6bcoa2	6bco	0.91884
a.24.16.0: automated matches	d1wola_	1wol	0.91087
a.25.1.1: Ferritin	d6txia_	6txi	0.90955
a.25.1.2: Ribonucleotide reductase-like	d3n20b_	3n20	0.90367

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13545	HTH_Crp_2	40.95
PF09361	Phasin_2	6.67
PF00027	cNMP_binding	0.95
PF07568	HisKA_2	0.95
PF00230	MIP	0.95
PF05139	Erythro_esteras	0.95
PF00211	Guanylate_cyc	0.95
PF13683	rve_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.95
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.95
COG2312	Erythromycin esterase homolog	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.90 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.90 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.90 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.90 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.14 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	31.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.43 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	31.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.81 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	31.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.81 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	31.43 %
Sphingomonas astaxanthinifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas astaxanthinifaciens	0.95 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	31.43 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.95 %
Sphingomonas astaxanthinifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas astaxanthinifaciens	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_56396	Not Available	1091	Open in IMG/M
3300000787\|JGI11643J11755_11481178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300000881\|JGI10215J12807_1218334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300000955\|JGI1027J12803_101581429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300003659\|JGI25404J52841_10044657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300004114\|Ga0062593_101791567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas astaxanthinifaciens	674	Open in IMG/M
3300004157\|Ga0062590_101381790	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300005146\|Ga0066817_1009032	Not Available	768	Open in IMG/M
3300005169\|Ga0066810_10033754	Not Available	928	Open in IMG/M
3300005289\|Ga0065704_10172024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1286	Open in IMG/M
3300005289\|Ga0065704_10614409	Not Available	600	Open in IMG/M
3300005290\|Ga0065712_10259285	Not Available	939	Open in IMG/M
3300005331\|Ga0070670_101814604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300005332\|Ga0066388_100104033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3312	Open in IMG/M
3300005338\|Ga0068868_100313494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1335	Open in IMG/M
3300005367\|Ga0070667_101843904	Not Available	569	Open in IMG/M
3300005406\|Ga0070703_10577725	Not Available	516	Open in IMG/M
3300005436\|Ga0070713_100114694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2354	Open in IMG/M
3300005471\|Ga0070698_100277098	All Organisms → cellular organisms → Bacteria → Proteobacteria	1609	Open in IMG/M
3300005530\|Ga0070679_100241042	All Organisms → cellular organisms → Bacteria → Proteobacteria	1765	Open in IMG/M
3300005616\|Ga0068852_102244181	Not Available	567	Open in IMG/M
3300005764\|Ga0066903_103835036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	808	Open in IMG/M
3300005937\|Ga0081455_10046149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3783	Open in IMG/M
3300006028\|Ga0070717_10100095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2460	Open in IMG/M
3300006052\|Ga0075029_101069449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300006576\|Ga0074047_10176317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300006969\|Ga0075419_10748323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300009011\|Ga0105251_10312638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300009053\|Ga0105095_10314890	Not Available	861	Open in IMG/M
3300009147\|Ga0114129_12515297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300009162\|Ga0075423_11120986	Not Available	838	Open in IMG/M
3300009177\|Ga0105248_13403595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300010375\|Ga0105239_13041597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300010400\|Ga0134122_10467288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1133	Open in IMG/M
3300012189\|Ga0137388_10475228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300012198\|Ga0137364_10922020	Not Available	661	Open in IMG/M
3300012198\|Ga0137364_11284785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300012507\|Ga0157342_1001464	All Organisms → cellular organisms → Bacteria → Proteobacteria	1757	Open in IMG/M
3300012514\|Ga0157330_1005229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300012907\|Ga0157283_10000304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6669	Open in IMG/M
3300012909\|Ga0157290_10013374	Not Available	1649	Open in IMG/M
3300012960\|Ga0164301_11327057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300013297\|Ga0157378_10029546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4840	Open in IMG/M
3300013308\|Ga0157375_10656048	Not Available	1205	Open in IMG/M
3300015371\|Ga0132258_10671112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2608	Open in IMG/M
3300015371\|Ga0132258_12598154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1265	Open in IMG/M
3300015372\|Ga0132256_100466700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1371	Open in IMG/M
3300015373\|Ga0132257_101847116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300018469\|Ga0190270_11768475	Not Available	673	Open in IMG/M
3300018481\|Ga0190271_11590534	Not Available	769	Open in IMG/M
3300019356\|Ga0173481_10050266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1431	Open in IMG/M
3300021344\|Ga0193719_10382722	Not Available	582	Open in IMG/M
3300021478\|Ga0210402_11617013	Not Available	575	Open in IMG/M
3300021951\|Ga0222624_1060775	Not Available	538	Open in IMG/M
3300022694\|Ga0222623_10068981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1368	Open in IMG/M
3300022883\|Ga0247786_1034917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	988	Open in IMG/M
3300022889\|Ga0247785_1052314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300022901\|Ga0247788_1000731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4720	Open in IMG/M
3300022901\|Ga0247788_1013411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1391	Open in IMG/M
3300023062\|Ga0247791_1066337	Not Available	585	Open in IMG/M
3300023169\|Ga0247762_1097003	Not Available	818	Open in IMG/M
3300025898\|Ga0207692_10281534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1006	Open in IMG/M
3300025914\|Ga0207671_10606066	Not Available	873	Open in IMG/M
3300025914\|Ga0207671_11048093	Not Available	642	Open in IMG/M
3300025920\|Ga0207649_11672662	Not Available	504	Open in IMG/M
3300025928\|Ga0207700_10646097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300025928\|Ga0207700_11797011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300025945\|Ga0207679_10375496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1245	Open in IMG/M
3300025961\|Ga0207712_11732689	Not Available	560	Open in IMG/M
3300026121\|Ga0207683_11093801	Not Available	740	Open in IMG/M
3300026773\|Ga0207566_102112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300026792\|Ga0207499_100809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300026802\|Ga0207511_103008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300027401\|Ga0208637_1009774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	960	Open in IMG/M
3300027444\|Ga0207468_1004641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300027617\|Ga0210002_1070536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300027682\|Ga0209971_1002681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4255	Open in IMG/M
3300027821\|Ga0209811_10256068	Not Available	669	Open in IMG/M
3300028587\|Ga0247828_11027041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300028768\|Ga0307280_10248986	Not Available	639	Open in IMG/M
3300028791\|Ga0307290_10184354	Not Available	765	Open in IMG/M
3300028793\|Ga0307299_10113699	Not Available	1015	Open in IMG/M
3300028819\|Ga0307296_10428917	Not Available	723	Open in IMG/M
3300028819\|Ga0307296_10760160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300028828\|Ga0307312_10522538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300028878\|Ga0307278_10315305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300030829\|Ga0308203_1030116	Not Available	753	Open in IMG/M
3300030903\|Ga0308206_1041010	Not Available	884	Open in IMG/M
3300030903\|Ga0308206_1163697	Not Available	544	Open in IMG/M
3300031170\|Ga0307498_10478259	Not Available	505	Open in IMG/M
3300031199\|Ga0307495_10108738	Not Available	668	Open in IMG/M
3300031226\|Ga0307497_10475283	Not Available	612	Open in IMG/M
3300031231\|Ga0170824_122029988	Not Available	1699	Open in IMG/M
3300031231\|Ga0170824_125578268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1332	Open in IMG/M
3300031424\|Ga0308179_1006217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300031446\|Ga0170820_10868271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300031740\|Ga0307468_102413068	Not Available	513	Open in IMG/M
3300031908\|Ga0310900_10347778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1108	Open in IMG/M
3300032000\|Ga0310903_10424217	Not Available	681	Open in IMG/M
3300032122\|Ga0310895_10143868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300032180\|Ga0307471_102448087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300033433\|Ga0326726_10044256	All Organisms → cellular organisms → Bacteria → Proteobacteria	3892	Open in IMG/M
3300033433\|Ga0326726_11200274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300033513\|Ga0316628_100183247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2496	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.43%
Host-Associated	Host-Associated	28.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	28.57%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.33%
Freshwater	Environmental → Aquatic → Freshwater	2.86%
Sediment	Environmental → Aquatic → Sediment	1.90%
Peat	Environmental → Terrestrial → Peat	1.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.48%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.95%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026773	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026792	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027444	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1w-11 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00669530	2199352025	Soil	MRDAQYLRAQAEFCLEVASQVSNQRTVENLKAEAARYHPEAADMEAATKRFHEMERH
JGI11643J11755_114811781	3300000787	Soil	MRDAKYLRAQAELCLEMARQVSDAKTADNLRVEAARYHAEAAEI
JGI10215J12807_12183341	3300000881	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPT
JGI1027J12803_1015814292	3300000955	Soil	MRDARYLRAQAELCLETARQMSDQTTADSLRAEAARYQA
JGI25404J52841_100446571	3300003659	Tabebuia Heterophylla Rhizosphere	MRDANYLRAQAELCLKLARQMSDRSAAENLRAEAARYHAEAAEIEVEQ
Ga0062593_1017915671	3300004114	Soil	MRDAQYLRGQAELCLQIARQISDAKAVENLKAEAARYHAQAAALEEIEKRQVATQHPGR*
Ga0062590_1013817901	3300004157	Soil	MRDAAYLRAQAELCLELARQISDPKAAANLRADAARYHAELASLERDQ
Ga0066817_10090322	3300005146	Soil	PGQQQKATWPGLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE*
Ga0066810_100337541	3300005169	Soil	MRDAQYLRAQAEFCLEVANQISDHKTVENLQAEAARYRAEATAIETARQPGSPS*
Ga0065704_101720241	3300005289	Switchgrass Rhizosphere	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPD
Ga0065704_106144091	3300005289	Switchgrass Rhizosphere	MRDANYLRAQADLCLEIARQISDHATAEDLRAEAARFQDEAAAIEAAEKLDPQSD*
Ga0065712_102592851	3300005290	Miscanthus Rhizosphere	PGLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE*
Ga0070670_1018146041	3300005331	Switchgrass Rhizosphere	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGG
Ga0066388_1001040332	3300005332	Tropical Forest Soil	MRDSNYLRAQAEFCLEIARQISDQATVESLRAEAARYQAEAAAMEAAERSESLSH*
Ga0068868_1003134943	3300005338	Miscanthus Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARYHAEAVAVEAEDHPESQGDRKSGDPKM
Ga0070667_1018439041	3300005367	Switchgrass Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARYHAEAVEVEAEDHPESQGDRKSG
Ga0070703_105777252	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE*
Ga0070713_1001146944	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRDAQYLRAQAEICLEVASQVSNQRTVANLKAEAARYHAEAADIEAATKQFHEMERH*
Ga0070698_1002770983	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRDARYLRAQAELCLEIAREMSNRKPAENLRAEAARYHAEA
Ga0070679_1002410421	3300005530	Corn Rhizosphere	PGLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAA*
Ga0068852_1022441812	3300005616	Corn Rhizosphere	GLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE*
Ga0066903_1038350362	3300005764	Tropical Forest Soil	MRDVNYLRAQAELCVEIARQIGDQATAENLRAEAARYQAEAAAMEAAERSESLSH*
Ga0081455_100461494	3300005937	Tabebuia Heterophylla Rhizosphere	MRDANYLRAQAELCLKLARQMSDRSAAENLRAEAARYHAEAAEIEVEQSGTKVTPQRSGGRHARRSENQ*
Ga0070717_101000955	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARYHAEAVEV
Ga0075029_1010694492	3300006052	Watersheds	MRDAQHLRAQAELCLKIGRQMSDPRAAEDLQAEAAHHCAEADAI
Ga0074047_101763172	3300006576	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAADQPGSE*
Ga0075419_107483232	3300006969	Populus Rhizosphere	MRDARYLRAQAELCLEMARQVSDRATSDNLRVEAARY
Ga0105251_103126382	3300009011	Switchgrass Rhizosphere	MRDAKYLRAQAELCLEMARQMSSNATAESLRGEAA
Ga0105095_103148903	3300009053	Freshwater Sediment	MRNAQYLRTQAELCLELARQMSDRHTVENLKAEAARYQAEAADIESAEQPESKDWL*
Ga0114129_125152971	3300009147	Populus Rhizosphere	MRDARYLRAQAELCLEIARGMSDRNAAENLRAEAARYHAEATQIEG
Ga0075423_111209861	3300009162	Populus Rhizosphere	MRNVQYLRAQADFCLQAARRISDHKTVENLKAEAARYRDEATEVEAAPHPRSKDEDAVS
Ga0105248_134035952	3300009177	Switchgrass Rhizosphere	MRDARYLRAQAELCLKIADQVSDPRAADCLHAEAARYH
Ga0105239_130415971	3300010375	Corn Rhizosphere	MRDARYLRAQAELCLAMARQMSDQTASENLRAEAARYHAEAAEIETG
Ga0134122_104672882	3300010400	Terrestrial Soil	MRDAQYLRAQAELCLEVARQISDLKTADNLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE
Ga0137388_104752281	3300012189	Vadose Zone Soil	MRDAQYLHAQAELCLALARQMSDPKTIENLKAEAVRYDAEAADVEA
Ga0137364_109220202	3300012198	Vadose Zone Soil	MRDAQYLRAQAVFCLEIARQINDQKTVENLYAEAARYHAEAAEIESAEPS*
Ga0137364_112847851	3300012198	Vadose Zone Soil	MRDARYLRAQAELCLAMARQVSDRGSADNLRAEAARYQA
Ga0157342_10014641	3300012507	Arabidopsis Rhizosphere	LRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE*
Ga0157330_10052293	3300012514	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLQAEAARYHAEAAAVEAAEQPGPDGGRPTAE
Ga0157283_100003045	3300012907	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAEEQPGPDGGRPTAA
Ga0157290_100133744	3300012909	Soil	VQLSCNQLTGQQQKATWPGLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAA*
Ga0164301_113270572	3300012960	Soil	MRNAQYLRAQAELCLEVARQMSDLKTAENLKAEAARYHAEAAA
Ga0157378_100295467	3300013297	Miscanthus Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARYHAEAVEVEAEDHPESQ
Ga0157375_106560482	3300013308	Miscanthus Rhizosphere	MRDAQYLRAQAEFCLEVASQVSNQRTVANLKAEAARYHAEAADIEAATKQFHEMERH*
Ga0132258_106711121	3300015371	Arabidopsis Rhizosphere	MEHAMRDAAYLRAQAELCLELARQISDPKAAANLRADAARYHAEVAALEDQAGSSAR*
Ga0132258_125981541	3300015371	Arabidopsis Rhizosphere	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEA
Ga0132256_1004667001	3300015372	Arabidopsis Rhizosphere	MRDARYLRAQAELCLKIADQVSDLRAADCLRAEAARYHAEAAEIET
Ga0132257_1018471161	3300015373	Arabidopsis Rhizosphere	MRDARYLRAQAQFCLEMARQVSDAATADNLRVEAARYHAEAD
Ga0187825_102750562	3300017930	Freshwater Sediment	MRDAQHLRAQAELCLKIARHMSDPRAAEELQAEAAHHYAEAAEIEAGEQPESRDTSERKR
Ga0190270_117684752	3300018469	Soil	MRDARYLREQAELCLQIARQMSDRSTADNLKAEAARYHAQAAAIEAGEEPVEYVAPSQS
Ga0190271_115905342	3300018481	Soil	MRDARYLRAQADFCLQMARQMSDRKTADNLKAEAARYQTEALALEVGETPPEISNTS
Ga0173481_100502662	3300019356	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAA
Ga0193719_103827221	3300021344	Soil	MRDAQYLRAQAEFCLEVANQVSNQRTVENLKAEAARYHAEAADMEAATKRFHEMERH
Ga0210402_116170131	3300021478	Soil	MRNAQYLRAQAEFCLEVARQMSDYKMVENLQAEAARYHAEA
Ga0222624_10607751	3300021951	Groundwater Sediment	MRDAQYLRAQAEFCLEVANQVSNQRTVENLKAEAARYHAEAADMEATTKRFHEMERH
Ga0222623_100689812	3300022694	Groundwater Sediment	MRDAQYLRARAEFCLEVARQINDQKTVENLYAEAARYHAEAAEIESAEQSGPKVIPDRSW
Ga0247786_10349172	3300022883	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE
Ga0247785_10523141	3300022889	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAAR
Ga0247788_10007311	3300022901	Soil	PGLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAA
Ga0247788_10134113	3300022901	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYH
Ga0247791_10663371	3300023062	Soil	MRDARYLRAQSEFCLEMARQMSDVKVAENLRAEAARYQAEAVAIETGEPSARELSGRE
Ga0247762_10970032	3300023169	Plant Litter	MRDARYLRAQSEFCLEMARQMSDVKVAENLRAEAARYQAEAVALETCEP
Ga0207692_102815341	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARYHAEAVEVEAE
Ga0207671_106060661	3300025914	Corn Rhizosphere	ELVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE
Ga0207671_110480931	3300025914	Corn Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARYHAEAVEVEAEDLRNHK
Ga0207649_116726621	3300025920	Corn Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDYKMVENLQAEAARYHAEAVEVETEHHPGSEL
Ga0207700_106460973	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARYHAEAVEVEAEDHP
Ga0207700_117970112	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRDARYLRGQAELCLEMARQVSDPRTAENLRVEAA
Ga0207679_103754961	3300025945	Corn Rhizosphere	MRNAQYLRAQAEFCLEVARQMSDHKIVENLQAEAARY
Ga0207712_117326892	3300025961	Switchgrass Rhizosphere	AQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE
Ga0207683_110938011	3300026121	Miscanthus Rhizosphere	TWPGLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE
Ga0207566_1021121	3300026773	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTA
Ga0207499_1008091	3300026792	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQP
Ga0207511_1030082	3300026802	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGP
Ga0208637_10097742	3300027401	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAVEQPGLQGGRPTAE
Ga0207468_10046412	3300027444	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQ
Ga0210002_10705361	3300027617	Arabidopsis Thaliana Rhizosphere	MRDAQYLRAQAELCLEVARQMSDLKTAENLKAEAARYHAE
Ga0209971_10026811	3300027682	Arabidopsis Thaliana Rhizosphere	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPEPEGDRPSAE
Ga0209811_102560682	3300027821	Surface Soil	MRDAQYLRAQAEFCLEVANQISDHKTVENLQAEAARYRAEAAAIETARQPGSPS
Ga0247828_110270411	3300028587	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLRAEAARYHAEAASVEAAEQPGSEEGRPIAE
Ga0307280_102489861	3300028768	Soil	MRDARYLRAQAELCLEMARQVSDPVASDDLRAEAARFHAEAAE
Ga0307290_101843542	3300028791	Soil	MRDAQYLRAQAEFCLEVSREMSDHKTVENLQAEAARYRTEAAEMEAARHPGSTRRSRIDVERH
Ga0307299_101136993	3300028793	Soil	MRDAQYLRAQAEFCLEVAGQVSNQRTVENLKAEAARYHAEAADMEAATKRFHEMERH
Ga0307296_104289172	3300028819	Soil	MRDAQYLRAQAEFCLEVASQVSNQRTVENLKAEAARYHAEAADMEAATKRFHEMERH
Ga0307296_107601601	3300028819	Soil	MRDARYLRAQAELCLEMARQMSDQRASENLRAEAARYHAEAAEIE
Ga0307312_105225382	3300028828	Soil	MRDARYLRAQAELCLEMARQMSDQRASENLRAEAARYHAEAAEIETG
Ga0307278_103153052	3300028878	Soil	MRDARYLRAQAELCLEMARQVSDRATADNLRAEAARYQAEVAEIEPASRRGS
Ga0308203_10301161	3300030829	Soil	RMRDAQYLRAQAEFCLEVSREMSDHKTVENLQAEAARYRTEAAEMEAARHPGSTRRSRIDVERH
Ga0308206_10410103	3300030903	Soil	SAQMRDARYLRAQAELCLEMARQGSDRATADNLRAEAARYQAEVAEIEPASRRGS
Ga0308206_11636972	3300030903	Soil	MRDAQYLRAQAEFCLEVARQISGGRTPDQRPKTAENLYAEAARYHAEAAEIESAEQSGPKVIPDRSWF
Ga0307498_104782592	3300031170	Soil	RQRMRDAQYLRAQAEFCLEVASQISDLKTVENLQADAARYRAEAAAIETTRQPGSPS
Ga0307495_101087381	3300031199	Soil	MRDVQYLRAQAEFCLEVASQISNERTVENLKAEAARYHAEAAEMEAATKPFHEMERH
Ga0307497_104752832	3300031226	Soil	KATWPGLVMRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAVEAAEQPGPDGGRPTAE
Ga0170824_1220299881	3300031231	Forest Soil	MLDAQHLRAQAEFCLEVASQISDHKTVENLQAEAARYRAEAAAIEAARQTGSPS
Ga0170824_1255782682	3300031231	Forest Soil	MRDARYLRAQAELCLEMPRRVSDRATSDNLRTEAARYHAEAAEI
Ga0308179_10062172	3300031424	Soil	MRDARYLRAQAELCLEMALQVSDRATADNLRAEAARHHAEA
Ga0170820_108682711	3300031446	Forest Soil	MRDARYLRAQAELCLEIARQISDQTSSDNLRAEAARYHAEAAEIET
Ga0307468_1024130682	3300031740	Hardwood Forest Soil	MRDANYLRAQADLCLEIARQISDHATAEDLRAEAARFQDEAAAIEAAEKLDPQSD
Ga0310900_103477781	3300031908	Soil	MRDAQYLRAQAELCLEVARQISDLKTAENLKAEAARYHAEAAAAEAAE
Ga0310903_104242172	3300032000	Soil	MRDAQYLRAQAEFCLEVANQISDHKTVENLQAEAARYRAEATAIETARQPGSPS
Ga0310895_101438682	3300032122	Soil	MRDARYLRAQAELCLEIAHQMSDRGAAEKLRADAAHYHAEAAEIEGMEP
Ga0307471_1024480871	3300032180	Hardwood Forest Soil	MRDATYLRAQAELCLEMARQVSDQATSDNLRAEAA
Ga0326726_100442565	3300033433	Peat Soil	MRDAQYLRAQAEFCLEVSRQMSDHKTVENLQAEAARYRTEAAEVEAARQPGSTSRSRIDV
Ga0326726_112002742	3300033433	Peat Soil	MRMRNAQYLRAQAEFCLEVARQMSDHKIVDNLQAEAARYHAEAVEVEAEQHSEPASIDPKMPGGE
Ga0316628_1001832474	3300033513	Soil	MRNAQYLRAQAEFCLEVARQMSDHKMVENLQAEAARYHAEAVEVEAEDHSESKVEQLKGE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095440

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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