NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095321

Metagenome Family F095321

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095321
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 44 residues
Representative Sequence WKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG
Number of Associated Samples 90
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.10 %
% of genes from short scaffolds (< 2000 bps) 87.62 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (80.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(42.857 % of family members)
Environment Ontology (ENVO) Unclassified
(81.905 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(88.571 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.21%    β-sheet: 0.00%    Coil/Unstructured: 62.79%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00303Thymidylat_synt 85.71
PF03819MazG 4.76
PF06356DUF1064 4.76
PF01503PRA-PH 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0207Thymidylate synthaseNucleotide transport and metabolism [F] 85.71


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A80.00 %
All OrganismsrootAll Organisms20.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876001|none_p146909Not Available500Open in IMG/M
3300000117|DelMOWin2010_c10035239All Organisms → Viruses → Predicted Viral2381Open in IMG/M
3300002482|JGI25127J35165_1023185All Organisms → Viruses → Predicted Viral1475Open in IMG/M
3300005821|Ga0078746_1024697All Organisms → Viruses → Predicted Viral1247Open in IMG/M
3300005837|Ga0078893_10158100All Organisms → Viruses → Predicted Viral3900Open in IMG/M
3300006737|Ga0098037_1011005All Organisms → cellular organisms → Bacteria3506Open in IMG/M
3300006738|Ga0098035_1189199Not Available690Open in IMG/M
3300006752|Ga0098048_1091431Not Available925Open in IMG/M
3300006789|Ga0098054_1126063Not Available951Open in IMG/M
3300006919|Ga0070746_10206791Not Available932Open in IMG/M
3300006924|Ga0098051_1077764Not Available899Open in IMG/M
3300006925|Ga0098050_1094084Not Available768Open in IMG/M
3300006928|Ga0098041_1111401Not Available883Open in IMG/M
3300007276|Ga0070747_1073925All Organisms → Viruses → Predicted Viral1278Open in IMG/M
3300007344|Ga0070745_1112443Not Available1056Open in IMG/M
3300007544|Ga0102861_1170155Not Available594Open in IMG/M
3300007718|Ga0102852_1031873Not Available979Open in IMG/M
3300007776|Ga0105674_1288749Not Available848Open in IMG/M
3300007863|Ga0105744_1026704All Organisms → Viruses → Predicted Viral1447Open in IMG/M
3300009445|Ga0115553_1258202Not Available680Open in IMG/M
3300009497|Ga0115569_10243487Not Available811Open in IMG/M
3300010148|Ga0098043_1089706Not Available905Open in IMG/M
3300010148|Ga0098043_1092708Not Available887Open in IMG/M
3300010148|Ga0098043_1208228Not Available540Open in IMG/M
3300010149|Ga0098049_1030617All Organisms → Viruses → Predicted Viral1750Open in IMG/M
3300010149|Ga0098049_1143815Not Available738Open in IMG/M
3300010150|Ga0098056_1097080Not Available1006Open in IMG/M
3300010430|Ga0118733_103046638Not Available918Open in IMG/M
3300012952|Ga0163180_10894486Not Available703Open in IMG/M
3300017708|Ga0181369_1129368Not Available507Open in IMG/M
3300017709|Ga0181387_1011452All Organisms → Viruses → Predicted Viral1714Open in IMG/M
3300017710|Ga0181403_1105985Not Available588Open in IMG/M
3300017717|Ga0181404_1058879Not Available961Open in IMG/M
3300017724|Ga0181388_1065450Not Available870Open in IMG/M
3300017724|Ga0181388_1073609Not Available816Open in IMG/M
3300017724|Ga0181388_1078750Not Available786Open in IMG/M
3300017724|Ga0181388_1106924Not Available666Open in IMG/M
3300017725|Ga0181398_1070219Not Available840Open in IMG/M
3300017727|Ga0181401_1006235All Organisms → cellular organisms → Bacteria4033Open in IMG/M
3300017727|Ga0181401_1070105Not Available927Open in IMG/M
3300017727|Ga0181401_1112978Not Available683Open in IMG/M
3300017728|Ga0181419_1052962Not Available1054Open in IMG/M
3300017728|Ga0181419_1053600Not Available1046Open in IMG/M
3300017730|Ga0181417_1076907Not Available810Open in IMG/M
3300017732|Ga0181415_1141899Not Available538Open in IMG/M
3300017735|Ga0181431_1019951Not Available1561Open in IMG/M
3300017739|Ga0181433_1057827Not Available978Open in IMG/M
3300017739|Ga0181433_1110522Not Available663Open in IMG/M
3300017740|Ga0181418_1015789Not Available2008Open in IMG/M
3300017742|Ga0181399_1018606All Organisms → Viruses → Predicted Viral1958Open in IMG/M
3300017743|Ga0181402_1032502All Organisms → Viruses → Predicted Viral1450Open in IMG/M
3300017744|Ga0181397_1053789Not Available1109Open in IMG/M
3300017744|Ga0181397_1141419Not Available618Open in IMG/M
3300017746|Ga0181389_1081816Not Available905Open in IMG/M
3300017748|Ga0181393_1069857Not Available933Open in IMG/M
3300017750|Ga0181405_1007300Not Available3221Open in IMG/M
3300017751|Ga0187219_1160143Not Available643Open in IMG/M
3300017752|Ga0181400_1007607All Organisms → cellular organisms → Bacteria3887Open in IMG/M
3300017753|Ga0181407_1097106Not Available743Open in IMG/M
3300017755|Ga0181411_1138718Not Available704Open in IMG/M
3300017756|Ga0181382_1065814Not Available1021Open in IMG/M
3300017756|Ga0181382_1194229Not Available515Open in IMG/M
3300017758|Ga0181409_1134840Not Available726Open in IMG/M
3300017760|Ga0181408_1052256Not Available1091Open in IMG/M
3300017765|Ga0181413_1047552Not Available1333Open in IMG/M
3300017770|Ga0187217_1226365Not Available615Open in IMG/M
3300017772|Ga0181430_1081546Not Available976Open in IMG/M
3300017772|Ga0181430_1132277Not Available730Open in IMG/M
3300017772|Ga0181430_1140847Not Available703Open in IMG/M
3300017773|Ga0181386_1086145Not Available987Open in IMG/M
3300017781|Ga0181423_1133638Not Available961Open in IMG/M
3300017782|Ga0181380_1102871Not Available990Open in IMG/M
3300017783|Ga0181379_1123596Not Available935Open in IMG/M
3300017786|Ga0181424_10002224Not Available8679Open in IMG/M
3300020404|Ga0211659_10315656Not Available686Open in IMG/M
3300020424|Ga0211620_10441032Not Available550Open in IMG/M
3300020428|Ga0211521_10227695Not Available844Open in IMG/M
3300020446|Ga0211574_10013051Not Available3995Open in IMG/M
3300020469|Ga0211577_10378643Not Available879Open in IMG/M
3300021425|Ga0213866_10239244Not Available929Open in IMG/M
3300022068|Ga0212021_1056765Not Available798Open in IMG/M
(restricted) 3300022938|Ga0233409_10189795Not Available690Open in IMG/M
(restricted) 3300022938|Ga0233409_10314837Not Available546Open in IMG/M
3300024235|Ga0228665_1120760Not Available539Open in IMG/M
3300024266|Ga0228661_1040549Not Available853Open in IMG/M
3300024296|Ga0228629_1033105All Organisms → Viruses → Predicted Viral1399Open in IMG/M
(restricted) 3300024529|Ga0255044_10473052Not Available529Open in IMG/M
3300025083|Ga0208791_1056529Not Available672Open in IMG/M
3300025102|Ga0208666_1070652All Organisms → Viruses921Open in IMG/M
3300025699|Ga0209715_1002631All Organisms → Viruses13479Open in IMG/M
3300025769|Ga0208767_1029566All Organisms → Viruses2856Open in IMG/M
3300025849|Ga0209603_1155476All Organisms → Viruses925Open in IMG/M
3300025870|Ga0209666_1161391All Organisms → Viruses1005Open in IMG/M
3300028008|Ga0228674_1151460Not Available772Open in IMG/M
(restricted) 3300028045|Ga0233414_10200660Not Available895Open in IMG/M
3300028280|Ga0228646_1085200Not Available777Open in IMG/M
3300029309|Ga0183683_1042538Not Available697Open in IMG/M
3300029345|Ga0135210_1006809All Organisms → Viruses951Open in IMG/M
3300029787|Ga0183757_1042287Not Available850Open in IMG/M
3300031774|Ga0315331_10277881Not Available1237Open in IMG/M
3300032212|Ga0316207_10366696Not Available522Open in IMG/M
3300032254|Ga0316208_1123894Not Available610Open in IMG/M
3300032277|Ga0316202_10015479All Organisms → Viruses3815Open in IMG/M
3300034375|Ga0348336_203080Not Available526Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater42.86%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine16.19%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater6.67%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.67%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.71%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.81%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.86%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat2.86%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment1.90%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.90%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.95%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.95%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.95%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.95%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.95%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine0.95%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.95%
Diffuse Vent Fluid, Hydrothermal VentsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents0.95%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876001Marine microbial communities from Columbia River, CM, sample from CR-7km from mouth, GS312-0p1-CR7-chlmaxEnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300005821Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007544Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3EnvironmentalOpen in IMG/M
3300007718Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3EnvironmentalOpen in IMG/M
3300007776Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS915_Marker113_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007863Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2umEnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020424Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022938 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MGEnvironmentalOpen in IMG/M
3300024235Seawater microbial communities from Monterey Bay, California, United States - 79DEnvironmentalOpen in IMG/M
3300024266Seawater microbial communities from Monterey Bay, California, United States - 75DEnvironmentalOpen in IMG/M
3300024296Seawater microbial communities from Monterey Bay, California, United States - 36DEnvironmentalOpen in IMG/M
3300024529 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025699Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028008Seawater microbial communities from Monterey Bay, California, United States - 1D_rEnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028280Seawater microbial communities from Monterey Bay, California, United States - 58DEnvironmentalOpen in IMG/M
3300029309Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440EnvironmentalOpen in IMG/M
3300029345Marine harbor viral communities from the Indian Ocean - SCH1EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300032212Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-week pyriteEnvironmentalOpen in IMG/M
3300032254Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month chalcopyriteEnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_14690922236876001Marine EstuarineRFLKIKNWKIRIVANNKEMISPGEYKNIEILPKLFEMYRHYYKLNTKGKG
DelMOWin2010_1003523913300000117MarineKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKR*
JGI25127J35165_102318513300002482MarineIVANNKEMISPGDYSRTEIYPKVFEMYRYYYKQNTKGKG*
Ga0078746_102469713300005821Marine SedimentANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG*
Ga0078893_1015810023300005837Marine Surface WaterKEMISPGDYNRAEIYPKIFELYRHYYKLNTKDKR*
Ga0098037_101100513300006737MarineNNKEMISPGEYRKHEILPKLFEMYRYYYKLNTKGKG*
Ga0098035_118919923300006738MarineWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG*
Ga0098048_109143113300006752MarineVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG*
Ga0098054_112606333300006789MarineSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG*
Ga0070746_1020679113300006919AqueousGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG*
Ga0098051_107776413300006924MarinePGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG*
Ga0098050_109408423300006925MarineTPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYYKLNTKGKG*
Ga0098041_111140123300006928MarineWKVRIVANNKEMISPGDYNRAEIYPKIFELYRHYYKLNTKDKR*
Ga0070747_107392533300007276AqueousATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYHKLNTKGNR*
Ga0070745_111244313300007344AqueousNNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG*
Ga0102861_117015523300007544EstuarineIRIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGKG*
Ga0102852_103187313300007718EstuarineIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGKG*
Ga0105674_128874913300007776Diffuse Vent Fluid, Hydrothermal VentsKNQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKR*
Ga0105744_102670413300007863Estuary WaterKIRIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGKG*
Ga0115553_125820213300009445Pelagic MarineKIRIVANIKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKR*
Ga0115569_1024348723300009497Pelagic MarineVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG*
Ga0098043_108970613300010148MarineKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKQNTKGKR*
Ga0098043_109270823300010148MarineKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKQNTKGNG*
Ga0098043_120822823300010148MarineAATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYKYYYKLNTKGKG*
Ga0098049_103061733300010149MarineGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYYKLNTKGKG*
Ga0098049_114381513300010149MarineATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG*
Ga0098056_109708033300010150MarineFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYYKLNTKGKG*
Ga0118733_10304663833300010430Marine SedimentVANNKEMISPGEYKKHEILPKLFEMYRYYYRLNTKGKR*
Ga0163180_1089448623300012952SeawaterPGFDVGSWKVRIVSNNKEMISPGDYSRTEIYPKLFELYRYYYKLNTKGNR*
Ga0181369_112936813300017708MarineANQPGYDVGSLKVRIVANNKEMISPGDYNRAEIYPKIFELYRHYYKLNTKDKR
Ga0181387_101145233300017709SeawaterANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKR
Ga0181403_110598513300017710SeawaterIRIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGKR
Ga0181404_105887933300017717SeawaterVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG
Ga0181388_106545033300017724SeawaterWKVRIVANNKEMISPGDYNRAEIYPKIFELYRHYYKLNTKPNG
Ga0181388_107360923300017724SeawaterVLAATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKLNTKDKG
Ga0181388_107875023300017724SeawaterQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGNG
Ga0181388_110692423300017724SeawaterNQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG
Ga0181398_107021913300017725SeawaterRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGK
Ga0181401_100623513300017727SeawaterGVLAATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0181401_107010513300017727SeawaterNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGNG
Ga0181401_111297823300017727SeawaterIAATPGFDVGSWKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG
Ga0181419_105296213300017728SeawaterFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKDK
Ga0181419_105360013300017728SeawaterFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKDNR
Ga0181417_107690723300017730SeawaterSEGFKNQHWKIRIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGKR
Ga0181415_114189913300017732SeawaterDEAWKVRIVANNKEMISPGDYNRAEIYPKIFELYRHYYKLNTKPNG
Ga0181431_101995133300017735SeawaterVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0181433_105782733300017739SeawaterGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKR
Ga0181433_111052223300017739SeawaterDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0181418_101578943300017740SeawaterGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0181399_101860613300017742SeawaterGFKNQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGNG
Ga0181402_103250233300017743SeawaterVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGKR
Ga0181397_105378913300017744SeawaterATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKLNTKDKG
Ga0181397_114141923300017744SeawaterANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0181389_108181613300017746SeawaterIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKDNR
Ga0181393_106985713300017748SeawaterNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKR
Ga0181405_100730013300017750SeawaterAATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0187219_116014323300017751SeawaterIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKR
Ga0181400_100760713300017752SeawaterTPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0181407_109710613300017753SeawaterVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKDK
Ga0181411_113871813300017755SeawaterSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKDK
Ga0181382_106581433300017756SeawaterWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYHKLNTKDNR
Ga0181382_119422923300017756SeawaterTPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKLNTKDKG
Ga0181409_113484013300017758SeawaterFKNQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRYYYKLNTKGKR
Ga0181408_105225613300017760SeawaterVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKR
Ga0181413_104755243300017765SeawaterFDVGSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKINTKDKR
Ga0187217_122636513300017770SeawaterATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGNG
Ga0181430_108154613300017772SeawaterWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKR
Ga0181430_113227713300017772SeawaterWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKDK
Ga0181430_114084713300017772SeawaterIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGNG
Ga0181386_108614513300017773SeawaterNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKDNR
Ga0181423_113363833300017781SeawaterVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKR
Ga0181380_110287133300017782SeawaterAATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKLNTKDKG
Ga0181379_112359633300017783SeawaterTPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYKYYYKLNTKGKG
Ga0181424_1000222413300017786SeawaterFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRYYHKLNTKEKR
Ga0211659_1031565613300020404MarineKGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKQNTKGNG
Ga0211620_1044103223300020424MarineIVANNKEMISPGDYSRTEIYPKIFELYRYYYKLNTKGNG
Ga0211521_1022769523300020428MarineVGSWKIRIVANNKEMISPGDYNRTEIYPKLFEMYKYYYKLNTKGKR
Ga0211574_1001305113300020446MarineIVANNKEMISPGDYSRTEIYPKIFELYKYYYKLNTKGNG
Ga0211577_1037864333300020469MarineVANNKEMISPGDYSRTEIYPKLFELYRYYYKLNTKGDR
Ga0213868_1063840323300021389SeawaterAEGFKNQQWKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKINTKGKG
Ga0213866_1023924433300021425SeawaterLANQPGYDVGSWKIRIVANNKEMISPGDYNRTEIYPKVFEMYRHYYKQNTKGNG
Ga0212021_105676533300022068AqueousPGYDVGSWKVRIVANNKEMISPGDYNRAEIYPKIFELYRHYYNLNTKPNG
(restricted) Ga0233409_1018979523300022938SeawaterIVANNKEMISPGEYKKHEILPKLFEMYRHYYRLNTKGKR
(restricted) Ga0233409_1031483723300022938SeawaterANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG
Ga0228665_112076023300024235SeawaterSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKQNTKGKG
Ga0228661_104054933300024266SeawaterDVGSWKIRIVANNKEMISPGDYNRAEIYPKIFELYRHYYNLNTKPNG
Ga0228629_103310513300024296SeawaterAIAATPGFDVGSWKIRIVANNKEMISPGDYNRAEIYPKIFELYRHYYNLNTKPNG
(restricted) Ga0255044_1047305213300024529SeawaterNQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKR
Ga0208791_105652923300025083MarineVLAATPGFDVGSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG
Ga0208666_107065213300025102MarineWKVRIVANNKEMISPGDYSRTEIYPKIFELYRYYYKLNTKGKG
Ga0209715_100263113300025699Pelagic MarineRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG
Ga0208767_102956683300025769AqueousWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGKG
Ga0209603_115547613300025849Pelagic MarineANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKR
Ga0209666_116139133300025870MarineKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG
Ga0228674_115146023300028008SeawaterSWKIRIVANNKEMISPGDYSRTEIYPKVFEMYRHYYKLNTKGNG
(restricted) Ga0233414_1020066033300028045SeawaterIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKR
Ga0228646_108520013300028280SeawaterRIVANNKEMISPGDYNRAEIYPKIFELYRHYYKLNTKPNG
Ga0183683_104253813300029309MarineVGSWKIRIVANNKEMISPGDYSRTEIYPKLFEMYRYYYKQNTKGNG
Ga0135210_100680913300029345Marine HarborVANNKEMISPGDYSRTEIYPKIFELYKYYYKQNTKGNG
Ga0183757_104228723300029787MarineNNKEMISPGDYSRTEIYPKVFELYRYYYKLNTKGDR
Ga0315331_1027788143300031774SeawaterQQGYDVGSWKVRIVANNKEMISPGDYNRAEIYPKIFELYRHYYKLNTKPNG
Ga0316207_1036669613300032212Microbial MatAATPGFDVGSWKIRIVANNKEMISPGDYNRTEIYPKVFEMYRYYYKQNTKGKG
Ga0316208_112389423300032254Microbial MatIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG
Ga0316202_1001547913300032277Microbial MatQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG
Ga0348336_203080_376_5253300034375AqueousGFKNQNWKIRIVANNKEMISPGEYKKHEILPKLFEMYRHYYKLNTKGKG


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