Basic Information | |
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Family ID | F094711 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 66 residues |
Representative Sequence | MIVALWIIAVCEVIRAIQNMIQIITIRHDTGARDNAYAEFVKSLKQTDKEFVKRMLEEFESEDKE |
Number of Associated Samples | 36 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 95.24 % |
% of genes near scaffold ends (potentially truncated) | 9.52 % |
% of genes from short scaffolds (< 2000 bps) | 56.19 % |
Associated GOLD sequencing projects | 29 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.38 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (45.714 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (60.952 % of family members) |
Environment Ontology (ENVO) | Unclassified (100.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut (69.524 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 65.59% β-sheet: 0.00% Coil/Unstructured: 34.41% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.38 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 104 Family Scaffolds |
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PF04448 | DUF551 | 7.69 |
PF14354 | Lar_restr_allev | 7.69 |
PF02086 | MethyltransfD12 | 1.92 |
PF00436 | SSB | 1.92 |
PF01381 | HTH_3 | 1.92 |
PF00692 | dUTPase | 1.92 |
PF12844 | HTH_19 | 1.92 |
PF01507 | PAPS_reduct | 1.92 |
PF14359 | DUF4406 | 1.92 |
PF01844 | HNH | 1.92 |
PF13392 | HNH_3 | 1.92 |
PF02195 | ParBc | 0.96 |
PF06067 | DUF932 | 0.96 |
PF01807 | zf-CHC2 | 0.96 |
PF13384 | HTH_23 | 0.96 |
PF13508 | Acetyltransf_7 | 0.96 |
PF07538 | ChW | 0.96 |
PF06605 | Prophage_tail | 0.96 |
PF13240 | zinc_ribbon_2 | 0.96 |
PF00216 | Bac_DNA_binding | 0.96 |
PF05065 | Phage_capsid | 0.96 |
PF13353 | Fer4_12 | 0.96 |
PF06114 | Peptidase_M78 | 0.96 |
PF00589 | Phage_integrase | 0.96 |
PF01471 | PG_binding_1 | 0.96 |
PF09414 | RNA_ligase | 0.96 |
PF03237 | Terminase_6N | 0.96 |
PF00145 | DNA_methylase | 0.96 |
PF07733 | DNA_pol3_alpha | 0.96 |
PF04860 | Phage_portal | 0.96 |
PF06810 | Phage_GP20 | 0.96 |
PF11417 | Inhibitor_G39P | 0.96 |
PF13248 | zf-ribbon_3 | 0.96 |
PF10076 | Phage_Mu_Gp48 | 0.96 |
PF00196 | GerE | 0.96 |
PF13481 | AAA_25 | 0.96 |
COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
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COG0338 | DNA-adenine methylase | Replication, recombination and repair [L] | 1.92 |
COG0629 | Single-stranded DNA-binding protein | Replication, recombination and repair [L] | 1.92 |
COG0717 | dCTP deaminase | Nucleotide transport and metabolism [F] | 1.92 |
COG0756 | dUTP pyrophosphatase (dUTPase) | Defense mechanisms [V] | 1.92 |
COG2965 | Primosomal replication protein N | Replication, recombination and repair [L] | 1.92 |
COG3392 | Adenine-specific DNA methylase | Replication, recombination and repair [L] | 1.92 |
COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 0.96 |
COG0358 | DNA primase (bacterial type) | Replication, recombination and repair [L] | 0.96 |
COG0587 | DNA polymerase III, alpha subunit | Replication, recombination and repair [L] | 0.96 |
COG0776 | Bacterial nucleoid DNA-binding protein IHF-alpha | Replication, recombination and repair [L] | 0.96 |
COG2176 | DNA polymerase III, alpha subunit (gram-positive type) | Replication, recombination and repair [L] | 0.96 |
COG4653 | Predicted phage phi-C31 gp36 major capsid-like protein | Mobilome: prophages, transposons [X] | 0.96 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 54.29 % |
Unclassified | root | N/A | 45.71 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2061766007|rumenHiSeq_NODE_302087_len_42661_cov_3_276412 | Not Available | 42711 | Open in IMG/M |
2061766007|rumenHiSeq_NODE_917488_len_35071_cov_3_791537 | All Organisms → cellular organisms → Bacteria | 35121 | Open in IMG/M |
3300009872|Ga0130079_12139019 | Not Available | 581 | Open in IMG/M |
3300010998|Ga0139311_1000142 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 111467 | Open in IMG/M |
3300011005|Ga0139361_1000136 | Not Available | 36014 | Open in IMG/M |
3300011008|Ga0139362_1250711 | All Organisms → Viruses → Predicted Viral | 1150 | Open in IMG/M |
3300012979|Ga0123348_10656076 | Not Available | 586 | Open in IMG/M |
3300020011|Ga0207351_1218 | All Organisms → cellular organisms → Bacteria | 111467 | Open in IMG/M |
3300020039|Ga0207352_1797 | All Organisms → cellular organisms → Bacteria | 36014 | Open in IMG/M |
3300021254|Ga0223824_10102030 | All Organisms → Viruses → Predicted Viral | 2620 | Open in IMG/M |
3300021255|Ga0223825_11223992 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales | 1390 | Open in IMG/M |
3300021255|Ga0223825_11641821 | Not Available | 5004 | Open in IMG/M |
3300021255|Ga0223825_12295591 | Not Available | 37165 | Open in IMG/M |
3300021255|Ga0223825_12880888 | Not Available | 819 | Open in IMG/M |
3300021255|Ga0223825_12985134 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriaceae → Pseudoramibacter → Pseudoramibacter porci | 5296 | Open in IMG/M |
3300021256|Ga0223826_10301160 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp. | 1357 | Open in IMG/M |
3300021256|Ga0223826_10506704 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales | 959 | Open in IMG/M |
3300021387|Ga0223845_10632955 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales | 643 | Open in IMG/M |
3300021387|Ga0223845_11250312 | Not Available | 42414 | Open in IMG/M |
3300021387|Ga0223845_11341391 | All Organisms → Viruses → Predicted Viral | 3123 | Open in IMG/M |
3300021387|Ga0223845_11985981 | All Organisms → Viruses → Predicted Viral | 4788 | Open in IMG/M |
3300021387|Ga0223845_12347494 | Not Available | 15366 | Open in IMG/M |
3300021387|Ga0223845_12538595 | Not Available | 29394 | Open in IMG/M |
3300021387|Ga0223845_12862191 | All Organisms → cellular organisms → Bacteria | 1457 | Open in IMG/M |
3300021399|Ga0224415_10001324 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales | 32231 | Open in IMG/M |
3300021399|Ga0224415_10108917 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Emmerichvirinae → Ceceduovirus | 2562 | Open in IMG/M |
3300021399|Ga0224415_10125566 | All Organisms → Viruses → Predicted Viral | 2368 | Open in IMG/M |
3300021399|Ga0224415_10511077 | All Organisms → Viruses → Predicted Viral | 1002 | Open in IMG/M |
3300021399|Ga0224415_11084010 | Not Available | 575 | Open in IMG/M |
3300021400|Ga0224422_10018179 | Not Available | 1079 | Open in IMG/M |
3300021400|Ga0224422_10026369 | Not Available | 21039 | Open in IMG/M |
3300021400|Ga0224422_10127208 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli | 1486 | Open in IMG/M |
3300021400|Ga0224422_11146625 | All Organisms → Viruses → Predicted Viral | 1757 | Open in IMG/M |
3300021426|Ga0224482_10001422 | All Organisms → cellular organisms → Bacteria | 37291 | Open in IMG/M |
3300021426|Ga0224482_10070768 | All Organisms → Viruses → Predicted Viral | 3088 | Open in IMG/M |
3300021426|Ga0224482_10466683 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 1037 | Open in IMG/M |
3300021431|Ga0224423_10003698 | Not Available | 20597 | Open in IMG/M |
3300021431|Ga0224423_10104229 | All Organisms → Viruses → Predicted Viral | 2751 | Open in IMG/M |
3300021431|Ga0224423_10217247 | All Organisms → Viruses → Predicted Viral | 1826 | Open in IMG/M |
3300021431|Ga0224423_11050590 | Not Available | 613 | Open in IMG/M |
3300026549|Ga0256404_1126703 | Not Available | 1378 | Open in IMG/M |
3300026549|Ga0256404_1126703 | Not Available | 1378 | Open in IMG/M |
3300028048|Ga0256405_10267567 | All Organisms → Viruses → Predicted Viral | 1062 | Open in IMG/M |
3300028591|Ga0247611_10029269 | All Organisms → cellular organisms → Bacteria | 5708 | Open in IMG/M |
3300028591|Ga0247611_10040875 | All Organisms → cellular organisms → Bacteria | 4741 | Open in IMG/M |
3300028591|Ga0247611_10211442 | Not Available | 2063 | Open in IMG/M |
3300028591|Ga0247611_10265881 | All Organisms → Viruses → Predicted Viral | 1838 | Open in IMG/M |
3300028591|Ga0247611_10922162 | Not Available | 904 | Open in IMG/M |
3300028591|Ga0247611_11092041 | Not Available | 812 | Open in IMG/M |
3300028591|Ga0247611_11355339 | Not Available | 704 | Open in IMG/M |
3300028797|Ga0265301_10033615 | All Organisms → Viruses → Predicted Viral | 4085 | Open in IMG/M |
3300028797|Ga0265301_10082689 | Not Available | 2458 | Open in IMG/M |
3300028797|Ga0265301_10918217 | Not Available | 634 | Open in IMG/M |
3300028805|Ga0247608_10002063 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales | 26245 | Open in IMG/M |
3300028832|Ga0265298_10329171 | All Organisms → Viruses → Predicted Viral | 1426 | Open in IMG/M |
3300028832|Ga0265298_10399843 | All Organisms → Viruses → Predicted Viral | 1267 | Open in IMG/M |
3300028832|Ga0265298_11019695 | Not Available | 716 | Open in IMG/M |
3300028833|Ga0247610_10000620 | Not Available | 48541 | Open in IMG/M |
3300028833|Ga0247610_11132082 | Not Available | 781 | Open in IMG/M |
3300028833|Ga0247610_11858386 | Not Available | 560 | Open in IMG/M |
3300028887|Ga0265299_11495541 | Not Available | 548 | Open in IMG/M |
3300028888|Ga0247609_10009208 | Not Available | 9226 | Open in IMG/M |
3300028888|Ga0247609_12053707 | Not Available | 533 | Open in IMG/M |
3300028914|Ga0265300_10057825 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia | 2617 | Open in IMG/M |
3300028914|Ga0265300_10101623 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia | 1946 | Open in IMG/M |
3300030772|Ga0061013_11060310 | Not Available | 577 | Open in IMG/M |
3300031760|Ga0326513_10000381 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 37243 | Open in IMG/M |
3300031760|Ga0326513_10019063 | Not Available | 5013 | Open in IMG/M |
3300031760|Ga0326513_10176842 | All Organisms → Viruses → Predicted Viral | 1831 | Open in IMG/M |
3300031760|Ga0326513_10189787 | All Organisms → Viruses → Predicted Viral | 1772 | Open in IMG/M |
3300031760|Ga0326513_10539700 | All Organisms → Viruses → Predicted Viral | 1050 | Open in IMG/M |
3300031760|Ga0326513_11775666 | Not Available | 516 | Open in IMG/M |
3300031853|Ga0326514_10018374 | All Organisms → Viruses → Predicted Viral | 4797 | Open in IMG/M |
3300031853|Ga0326514_10026459 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia | 4111 | Open in IMG/M |
3300031853|Ga0326514_11342364 | Not Available | 602 | Open in IMG/M |
3300031867|Ga0326511_10006323 | Not Available | 9362 | Open in IMG/M |
3300031867|Ga0326511_10046830 | All Organisms → cellular organisms → Bacteria | 3696 | Open in IMG/M |
3300031867|Ga0326511_10153535 | Not Available | 2160 | Open in IMG/M |
3300031867|Ga0326511_10337961 | All Organisms → Viruses → Predicted Viral | 1480 | Open in IMG/M |
3300031867|Ga0326511_10353535 | All Organisms → Viruses → Predicted Viral | 1447 | Open in IMG/M |
3300031867|Ga0326511_10882466 | Not Available | 879 | Open in IMG/M |
3300031867|Ga0326511_11228369 | Not Available | 718 | Open in IMG/M |
3300031867|Ga0326511_11842058 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium | 550 | Open in IMG/M |
3300031867|Ga0326511_12032259 | Not Available | 515 | Open in IMG/M |
3300031993|Ga0310696_10027131 | Not Available | 6399 | Open in IMG/M |
3300031993|Ga0310696_10534103 | Not Available | 1264 | Open in IMG/M |
3300031994|Ga0310691_10707921 | All Organisms → Viruses → Predicted Viral | 1095 | Open in IMG/M |
3300031994|Ga0310691_11813932 | Not Available | 584 | Open in IMG/M |
3300031998|Ga0310786_11182318 | Not Available | 824 | Open in IMG/M |
3300032030|Ga0310697_10045469 | All Organisms → Viruses → Predicted Viral | 4063 | Open in IMG/M |
3300032038|Ga0326512_10000088 | Not Available | 73296 | Open in IMG/M |
3300032038|Ga0326512_10000703 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 28308 | Open in IMG/M |
3300032038|Ga0326512_10007943 | Not Available | 7666 | Open in IMG/M |
3300032038|Ga0326512_10028063 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium | 4190 | Open in IMG/M |
3300032038|Ga0326512_10173128 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1731 | Open in IMG/M |
3300032038|Ga0326512_10299034 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 1293 | Open in IMG/M |
3300032038|Ga0326512_10310026 | All Organisms → Viruses → Predicted Viral | 1267 | Open in IMG/M |
3300032038|Ga0326512_10443509 | All Organisms → Viruses → Predicted Viral | 1033 | Open in IMG/M |
3300032038|Ga0326512_10477127 | All Organisms → cellular organisms → Bacteria → FCB group → Fibrobacteres → Fibrobacteria → Fibrobacterales → Fibrobacteraceae → Fibrobacter | 990 | Open in IMG/M |
3300032038|Ga0326512_10513561 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Bilifractor → Bilifractor porci | 948 | Open in IMG/M |
3300032038|Ga0326512_11003570 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriaceae → Eubacterium → unclassified Eubacterium → Eubacterium sp. | 618 | Open in IMG/M |
3300033463|Ga0310690_10125862 | Not Available | 2939 | Open in IMG/M |
3300033463|Ga0310690_10395119 | All Organisms → Viruses → Predicted Viral | 1571 | Open in IMG/M |
3300033463|Ga0310690_10535115 | Not Available | 1327 | Open in IMG/M |
3300033463|Ga0310690_12096871 | Not Available | 597 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen | 60.95% |
Cattle And Sheep Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen | 29.52% |
Moose Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Moose Rumen | 4.76% |
Bovine Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen | 1.90% |
Fecal | Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal | 0.95% |
Rumen | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen | 0.95% |
Fungi-Associated Bovine Rumen | Host-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen | 0.95% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2061766007 | Bovine rumen microbial communities fromthe University of Illinois at Urbana-Champaign, USA, that are switchgrass associated - Sample 470 | Host-Associated | Open in IMG/M |
3300009872 | Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Switchgrass. Combined Assembly of Gp0148675, Gp0148676 | Host-Associated | Open in IMG/M |
3300010998 | Rumen fluid microbial communities from healthy moose, Palmer, Alaska - F02 | Host-Associated | Open in IMG/M |
3300011005 | Rumen fluid microbial communities from healthy moose, Palmer, Alaska- post 0.2 um filtrate | Host-Associated | Open in IMG/M |
3300011008 | Rumen microbial communities from healthy moose, Palmer, Alaska. Combined Assembly of Gp0161001, Gp0160600, Gp0160599, Gp0160598 | Host-Associated | Open in IMG/M |
3300012979 | Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung B1 Day 1 Metagenome | Host-Associated | Open in IMG/M |
3300020011 | Rumen fluid microbial communities from healthy moose, Palmer, Alaska - F02 Viral contigs | Host-Associated | Open in IMG/M |
3300020039 | Rumen fluid microbial communities from healthy moose, Palmer, Alaska- post 0.2 um filtrate Viral contigs | Host-Associated | Open in IMG/M |
3300021254 | Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly | Host-Associated | Open in IMG/M |
3300021255 | Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly | Host-Associated | Open in IMG/M |
3300021256 | Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly | Host-Associated | Open in IMG/M |
3300021387 | Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly | Host-Associated | Open in IMG/M |
3300021399 | Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly | Host-Associated | Open in IMG/M |
3300021400 | Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly | Host-Associated | Open in IMG/M |
3300021426 | Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly | Host-Associated | Open in IMG/M |
3300021431 | Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly | Host-Associated | Open in IMG/M |
3300026549 | Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_01 | Host-Associated | Open in IMG/M |
3300028048 | Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_02 | Host-Associated | Open in IMG/M |
3300028591 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2 | Host-Associated | Open in IMG/M |
3300028797 | Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 | Host-Associated | Open in IMG/M |
3300028805 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 | Host-Associated | Open in IMG/M |
3300028832 | Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01 | Host-Associated | Open in IMG/M |
3300028833 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 | Host-Associated | Open in IMG/M |
3300028887 | Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 | Host-Associated | Open in IMG/M |
3300028888 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 | Host-Associated | Open in IMG/M |
3300028914 | Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 | Host-Associated | Open in IMG/M |
3300030772 | Coassembly of Cow X Switchgrass | Host-Associated | Open in IMG/M |
3300031760 | Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518 | Host-Associated | Open in IMG/M |
3300031853 | Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518 | Host-Associated | Open in IMG/M |
3300031867 | Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518 | Host-Associated | Open in IMG/M |
3300031993 | Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 (v2) | Host-Associated | Open in IMG/M |
3300031994 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2) | Host-Associated | Open in IMG/M |
3300031998 | Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2) | Host-Associated | Open in IMG/M |
3300032030 | Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2) | Host-Associated | Open in IMG/M |
3300032038 | Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518 | Host-Associated | Open in IMG/M |
3300033463 | Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2) | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
_HiSeq_01069630 | 2061766007 | Bovine Rumen | MSIALWIIAICEVVRAVQNALQLLSFKHDRSARDNAYAEFVKSLKMSDREYVKRLLEEFEESEGEE |
_HiSeq_12439330 | 2061766007 | Bovine Rumen | MIVALWIIAVCEVIRAIQNMIQIMTIRHDTGTRDNAYAEFVKSLKQTDKEFVRRMLEEFESEAEDETDSI |
Ga0130079_121390192 | 3300009872 | Rumen | MKVAIWIIAICEVVRALQNLVQLMMVHHDTGARDNAYAEFVKSLKATDGEFVERMLKEWSEQHEGSKR* |
Ga0139311_1000142132 | 3300010998 | Moose Rumen | MTVAVWIIAVCEVIRATQNMVQIVTIMHDTKNRDNAYSEFINSLKSTDREFVKRMLEEYNDKYGE* |
Ga0139361_10001366 | 3300011005 | Moose Rumen | MTIAIWIIAIVELIRAAQNMVQILALRHEMANKDNAYAEYIKSLHMTDREFVRRMLEEFERQDG* |
Ga0139362_12507114 | 3300011008 | Moose Rumen | MKTALWIIAICEAIRAVQNLLQLWMLKRDTGARDNAYAEFVKSLKQTDKEFVRRVLEEFERSEDGET* |
Ga0123348_106560763 | 3300012979 | Fecal | MMIAIWIIAICEVIRALQNYMQLRMIRQDTGARDNAYAEFVKSLKWDDKQFVRSLLEEFEKQEGKQP* |
Ga0207351_1218133 | 3300020011 | Moose Rumen | MTVAVWIIAVCEVIRATQNMVQIVTIMHDTKNRDNAYSEFINSLKSTDREFVKRMLEEYNDKYGE |
Ga0207352_17976 | 3300020039 | Moose Rumen | MTIAIWIIAIVELIRAAQNMVQILALRHEMANKDNAYAEYIKSLHMTDREFVRRMLEEFERQDG |
Ga0223824_101020308 | 3300021254 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRAIQNMMQLAMVRKDTGARDNAYEEFVKSLKQTDGEFVKRMLEEFEREDGEA |
Ga0223825_112239922 | 3300021255 | Cattle And Sheep Rumen | MIIALWIIAICEVVRAIQNAIQIRSILQDTTARDNVYAEFIKSMKSTDREFVRQMLEEFERQEGAEKE |
Ga0223825_1164182114 | 3300021255 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRVIQNMMQLAMVRKDTGARDNAYEEFVKSLKQTDREFVKRMLEEFDREDGEA |
Ga0223825_1229559151 | 3300021255 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRSIQNMVQIMTIRHDTGARDNAYAEFVKSLKQTDSEFVKRMLEEFESEAEK |
Ga0223825_128808882 | 3300021255 | Cattle And Sheep Rumen | MTVAVWIIAICEIIRMLQNLIQLRLLVCDNSARDNAYSEFVKSLKMKDREFVKRMLEEFEENGRNEE |
Ga0223825_129851347 | 3300021255 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRAIQNMMQLAMVRKDTGERDNAYAEFVKSLKYTDREFVKRMLEEFEREDGEA |
Ga0223826_103011603 | 3300021256 | Cattle And Sheep Rumen | MNTALWIIAICEVIRAVQNLLQLWMLKRDTGARDNAYSAFVKSLKQTDKEFVRNVLEEFERSEDGET |
Ga0223826_105067041 | 3300021256 | Cattle And Sheep Rumen | MIIAIWIIAICEIIRAIQNMIQLSAVKHDTSARDNAYAEFVKSLKYSDREFVKRMLEEFDEGADNEQT |
Ga0223845_106329551 | 3300021387 | Cattle And Sheep Rumen | MIIAIWIIAIAEVIRVFQNHIQLRAIKHDASARDNAYAEFVKSLKQTDREFVKRMLEEFDEGADNEQT |
Ga0223845_1125031233 | 3300021387 | Cattle And Sheep Rumen | MKMALWIIAICEAIRAVQNLLQLRMLKRDTGARDNAYAQFIKSLKQTDKEFVRQMLEEFERSEE |
Ga0223845_113413917 | 3300021387 | Cattle And Sheep Rumen | MTIAIWIIAICEIIRAIQNMIQLSAVKHDTSARDNAYAEFVKSLKYSDREFVKRMLEEFEEGADE |
Ga0223845_1198598113 | 3300021387 | Cattle And Sheep Rumen | MIIAIWIIAICEIIRAIQNMIQLSAVKRDTSARDNAYAEFVKSLKYSDREFVKRMLEEFEEGADND |
Ga0223845_123474947 | 3300021387 | Cattle And Sheep Rumen | MTIALWIIAICEVIRAIQNMIQIGALLGDKKSRDNAYSEFVKSLKSTDREFVENMLKEFKEIHDGE |
Ga0223845_1253859537 | 3300021387 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRAIQNMIQIMTIRHDTEGRDNAYAEFVKSLKQTDGEFVRRMLEEFESEVEG |
Ga0223845_128621915 | 3300021387 | Cattle And Sheep Rumen | MIIAIWIIAVCEVVRAIQNAIQIRSILQDTTARDNAYAEFIKSLKSTDREFVRQMLEEFERQEGAERE |
Ga0224415_100013247 | 3300021399 | Cattle And Sheep Rumen | VIIALWIIAICEVVRAIQNAIQIRSILQDTTARDNVYAEFIKSLKSTDREFVRQMLEEFERQEGAERE |
Ga0224415_101089175 | 3300021399 | Cattle And Sheep Rumen | MIIIALWIIAICEIIRSIQNLMQLRMLHQDTASRDNAYAEFVKSLKSTDRDFVRRLLEEFDQQEVSKS |
Ga0224415_101255662 | 3300021399 | Cattle And Sheep Rumen | MKTAIWIIAICEVIRAAQNCAQLAMVHHDTGARDNAYTEFVKSLKMSDREYVKRVLEEFERQEEER |
Ga0224415_105110773 | 3300021399 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRAIQNMMQLAMVRKDTGARDNAYAEFVKSLKQTDREFVRRMLEEFEREDSES |
Ga0224415_110840102 | 3300021399 | Cattle And Sheep Rumen | MIVALWIIAICEVIRAMQNMMQLAMVRKDTGARDNAYEEFVKSLKQTDREFVKRILEEFEQEDGEA |
Ga0224422_100181791 | 3300021400 | Cattle And Sheep Rumen | RMIVALWIIAVCEVIRAVQNMMQLAMVRKDTGARDNAYEEFVKSLKQTDREFVKQMLEEFEREGGVDMRSE |
Ga0224422_1002636911 | 3300021400 | Cattle And Sheep Rumen | MKLAIWIIAICEVVRAVQNMIQLMAIRQDTSARDNAYAEFVKSLKMNDRQFVERMLKEFEEKEGSGNG |
Ga0224422_101272081 | 3300021400 | Cattle And Sheep Rumen | MKIVLWIIAIVEIIRAIQNHIQITAIKRDTSAMDNAYAEFVKSLKRTDREFVRRLLEEFE |
Ga0224422_111466252 | 3300021400 | Cattle And Sheep Rumen | MIIAIWIIAIVEVIRAIQNMIQLSAVKHDTSARDNAYAEFVKSLKMNDREFVKRFLEEFEEGADE |
Ga0224482_1000142232 | 3300021426 | Cattle And Sheep Rumen | MKIAIWIIAICEIIRAAQNMVQLMAVRHDTSARDNAYAEFVKSIKQTDKEFVRRLLEEFEKDGGADADVKP |
Ga0224482_100707684 | 3300021426 | Cattle And Sheep Rumen | MKLAIWIIAICEVVRAVQNMIQLMAIRQDTSARDNAYAEFVKSLKMNDRQFVARMLKEFEEKEGLGNE |
Ga0224482_104666832 | 3300021426 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRAIQNMMQLAMVRKDTGARDNAYEEFVKSLKQTDREFVKRMLEEFDREDGEA |
Ga0224423_1000369832 | 3300021431 | Cattle And Sheep Rumen | MIIALWIIAVCEVVRAIQNAIQIHSILQDTTARDNVYAEFIKSLKSTDREFVRKMLEEFERQEGAEKE |
Ga0224423_101042292 | 3300021431 | Cattle And Sheep Rumen | MIVALWIIAVCEVIRAVQNMMQLAMVRKDTGARDNAYEEFVKSLKQTDREFVKQMLEEFEREDVRRE |
Ga0224423_102172476 | 3300021431 | Cattle And Sheep Rumen | MIIAIWIIAVCEVVRAIQNAIQIRSILQDTTARDNVYAEFIKSLKSTDREFVRQMLEEFERQEGAEKE |
Ga0224423_110505902 | 3300021431 | Cattle And Sheep Rumen | AVCEVVRAIQNAIQIRSILQDTTARDNAYAEFIKSLKSTDREFVRQMLEEFERQEGEKE |
Ga0256404_11267032 | 3300026549 | Rumen | MKTALWIIALCEVVRVVQNAVQIREIKRDTGARDNAYAEFVKSLKMNDRQFVERMLKEFEEREGE |
Ga0256404_11267034 | 3300026549 | Rumen | MKTALWIIAICEVVRAAQNAIQLKAIKRDTGARDNAYAEFVKSLKMNDRQFVERMLKEFEEQEGEK |
Ga0256405_102675672 | 3300028048 | Rumen | MIIAIWVIAIVEVIRMIQNAWQIKAIMQDSSARDNVYAEFIKSLKSTDREFVRQMLEEFERQEEEEE |
Ga0247611_100292694 | 3300028591 | Rumen | MIIALWIIAICEVIRALQNMIQIMAIRHDQSQRDNAYAEFIKTLKKDDKQFVKEMLKEFERQAGEQE |
Ga0247611_100408758 | 3300028591 | Rumen | MKLAIWIIAICEVIRALQNLLQLWMVKRDTGARDNAYAEFVKSLKQTDREFVKGLLEEFERSEE |
Ga0247611_102114423 | 3300028591 | Rumen | MIVALWIIAVCEVIRAIQNMMQLAMVRKDTGARDNAYAEFVKSLNKTDREFVRRMLEEFESEVEE |
Ga0247611_102658816 | 3300028591 | Rumen | MKAALWIIALCEVVRAVQNAVQIRAIKRDTGARDNAYAEFVKSLKMNDRQFVERMLKEFEKQEGEGT |
Ga0247611_109221622 | 3300028591 | Rumen | MTIAIWLIVIIEAVRAAQNMMQLAMLKHDTGARDNAYAEFVKSLNKNDRQFVKEMLEEFDRAEREVEE |
Ga0247611_110920413 | 3300028591 | Rumen | MKTALWIIAICEVVRAVQNAVQLRAIKRDTGARDNAYAEFVKSLKMSDRQFVERMLKEFERQDGE |
Ga0247611_113553392 | 3300028591 | Rumen | MIIAIWIIAFCEVIRAIQNMIQLAMIKHDKGSRDNAYKEFVKSLKETDKEFVKRMLEEFESGDEE |
Ga0265301_100336156 | 3300028797 | Rumen | MIVALWIIAVCEVIRAIQNMIQIITIRHDTGARDNAYAEFVKSLKQTDKEFVKRMLEEFESEDKE |
Ga0265301_100826892 | 3300028797 | Rumen | MKVAIWIIAVCEVVRAAQNFIQINTIRRDVKARDNAYAEFVNSLKVSDRDFVKRLLREFESQEEQE |
Ga0265301_109182171 | 3300028797 | Rumen | MSIALWIIAICEVVRAAQNALQLLSIKDDRSARDNAYAEFVKSLKMSDREYVRRLLEEFEESEDKG |
Ga0247608_1000206312 | 3300028805 | Rumen | LIVALWIIAICEVIRALQNMIQIMAIRHDVSKRDNAYAEFIKSLKKDDKQFVKEMLEEFERQAGEQK |
Ga0265298_103291711 | 3300028832 | Rumen | MTIALWIIAICELIRALQNMLQIGMLKRDAGARDNAYAEFVRSLHDTDREFVRKMLEEFEKGEQLGRSD |
Ga0265298_103998433 | 3300028832 | Rumen | MKTALWIIAICEAIRAVQNLLQLWMLKRDTGARENAYAEFVKSLKQTDKEFVRQMLEEFERSEDE |
Ga0265298_110196951 | 3300028832 | Rumen | MIIAIWIIAICEVIRAIQNMIQIMTIRHDTKGRDNAYAEFVKSLKRTDREFVRQMLEEFEKAERRTDER |
Ga0247610_1000062071 | 3300028833 | Rumen | MIIAIWIIAIVEVIRAIQNMIQLSAVKHDTSARDNAYAEFVKSLKMNDREFVKRMLEEFEEGADE |
Ga0247610_111320822 | 3300028833 | Rumen | MIYAIWIIAICEVIRAIQNMMQLAMLKHDTGARDNAYAEFVKSLNKTDREFVKDLLEEFESEVEE |
Ga0247610_118583861 | 3300028833 | Rumen | MKAALWIIALCEVVRAVQNAVQIRAIKRDTGARDNAYAEFVKSLKMSDR |
Ga0265299_114955413 | 3300028887 | Rumen | MIYAIWIIAICEVIRAIQNMMQIAMVKHDTKARDNAYAEFVKSLNKTDREFVKCLLEEFESEVEE |
Ga0247609_1000920820 | 3300028888 | Rumen | MIVALWIIAVCEVIRAIQNMMQLAMVRKDTGARDNAYAEFVKSLNKTDREFVKDLLEEFESEVEE |
Ga0247609_120537072 | 3300028888 | Rumen | MIYAIWIIAICEVIRVIQNMMQLAILKHDTGARDNAYAEFVKSLNKTDREFVKDLLEEFESEVEE |
Ga0265300_100578254 | 3300028914 | Rumen | MTIALWIIAACEVIRIIQNTLQLLSIKHDTGARDNAYAAFVDSLKMNDREFVARILKEFDKNTDDGR |
Ga0265300_101016235 | 3300028914 | Rumen | MIIALWIIAVCEVIRIIQNSLQLLSIKHDTSARDNAYAAFVESLKMNDREFVARMLKEFEKNSDDGR |
Ga0061013_110603102 | 3300030772 | Fungi-Associated Bovine Rumen | MKVAIWIIAICEVVRALQNLVQLMMVHHDTGARDNAYAEFVKSLKATDGEFVERMLKEWSEQHEGSKR |
Ga0326513_1000038160 | 3300031760 | Rumen | MTITLWIIAICEIIRVAQNMVQLLAIRKDTAARDNAYAEFVKSLKQTDREFVRKMLEEFEKQEGEQDA |
Ga0326513_1001906311 | 3300031760 | Rumen | MMIAIWIIAICEVIRALQNVMQIHMLKHDTGARDNAYAEFVKSLKQSDREYVRMMLEEFVKQEGKQP |
Ga0326513_101768423 | 3300031760 | Rumen | MKLALWIIAVCEVIRLIQNGFQLRAIRHDTGARDNAYAEFVKSLKQSDREYVRMILEEFEQEGEE |
Ga0326513_101897874 | 3300031760 | Rumen | MKIAIWIIAICEIIRAAQNAIQLKAIKRDTGARDNAYSEFVKSLKMNDRQFVERMLKEFEKQEGEG |
Ga0326513_105397002 | 3300031760 | Rumen | MKIALWIIAICEVVRAVQNAVQLRAIKRDTGARDNAYAEFVKSLKMSDRQFVERMLKEFERQEGEG |
Ga0326513_117756662 | 3300031760 | Rumen | MTIALWIIAICEIIRAVQNFVQIHSIRHDTAARDNAYAEFVKSLKNTDREFVKRLLEEFDEEE |
Ga0326514_100183749 | 3300031853 | Rumen | MKIAIWIIAICEIIRAAQNAIQLKAIKRDTGARDNAYSEFVKSLKMNDRQFVERMLKEFEKQEDEG |
Ga0326514_100264595 | 3300031853 | Rumen | MIVALWIIAVCEVIRAIQNMMQLAMVRKDTGARDNAYEEFVKSLKQTDREFVRRMLEEFESEVEE |
Ga0326514_113423643 | 3300031853 | Rumen | MIIALWIIAVCEAIRVIQNGFQLRAIRHDTGARDNAYAEFVKSLKQSDREYVRRILEEFEQEGEE |
Ga0326511_1000632318 | 3300031867 | Rumen | MEISIWIIAACEVIRLVQNFVQLMTIKHDTSARDNAYAEFVKSLKVTDREFVKRVLSEFEEGGEDEG |
Ga0326511_100468303 | 3300031867 | Rumen | MMIAIWIIAICGAIRVVQNMIQITTMKHDTKGRDNAYAEFVKSLKQTDKEFVKEMLEEFERQEAQNERSDTENHSA |
Ga0326511_101535354 | 3300031867 | Rumen | MKTALWIIALCEVVRAVQNAVQIRAIKRDTGARDNAYAEFVKSLKMNDRQFVERMLKEFERQEGEG |
Ga0326511_103379611 | 3300031867 | Rumen | MKIALWIIAICEVVRAVQNAVQLRAIKRDTGARDNAYAEFVKSLKMSDRQFVERMLKEFE |
Ga0326511_103535353 | 3300031867 | Rumen | MKIAIWIIAICEIIRAAQNAIQLKAIKRDTGARDNAYSEFVKSLKMNDRQFVERMLKEFERQEGEG |
Ga0326511_108824662 | 3300031867 | Rumen | MIIAAIWIIAACEVIRMVQNCVQIRTIKHDTSARDNAYAEFVKSLKVTDREFVKRLLEEFEEEECS |
Ga0326511_112283693 | 3300031867 | Rumen | MIIALWIIAVCEAIRVIQNGFQLRAIRHDTGARDNAYAEFVKSLKQSDREYVRRILEEFEQEGENEMPKV |
Ga0326511_118420582 | 3300031867 | Rumen | MKTALWIIAICEVIRAAQNMVQIMTIKHDTKGRDNAYAEFVKSLKQSDREFVRRMLDEFEMQERE |
Ga0326511_120322592 | 3300031867 | Rumen | MKIAIWVIAICEVVRILQNMVQLMMVHHDTGARDNAYAEFVKSLKDTDEEFVENLLREFERESGERK |
Ga0310696_1002713114 | 3300031993 | Rumen | MTVAIWIIAICEVIRAAQNMLQIMMVKHDSAGRDNAYAEFIKSMKQTDKEFVRRMLEEYEKADNPQDAEEHHAAGNDNP |
Ga0310696_105341031 | 3300031993 | Rumen | MTAALWIIAVCEVIRAVQNMLQIRMIRRNSARQDNAYAEFVKSLKDTDREFVRKMLAEFEEQD |
Ga0310691_107079214 | 3300031994 | Rumen | MIVALWIIAVCEIIRAVQNMIQIMTIRHDTGARDNAYAEFVKSLHQTDKEFVRRMLDEFD |
Ga0310691_118139322 | 3300031994 | Rumen | MNIAIWIIAICEVIRAVQNLFQLMMVKHDTGARDNAYAEFVKSLNNTDAEMVKRLLEEFEELDGGNDEFHSKRD |
Ga0310786_111823181 | 3300031998 | Rumen | MKIAVWIIAVCEVVRAVQNFVQISFVRRDTGARDNAYAEFVKSLKMTDREFVERMLKEFE |
Ga0310697_100454694 | 3300032030 | Rumen | MTIPIWIIAICEVIRAIQNCIQIATIRHDTEGRDNAYAEFIKSLKQSDKEFVRRMLEEFEEQEGEG |
Ga0326512_100000882 | 3300032038 | Rumen | MTVAVWIIAICEIIRMLQNLIQLRLLVCDNSARDNAYSEFVKSLKMNDREFVKRMLEEFEENGRNEE |
Ga0326512_1000070316 | 3300032038 | Rumen | MTVAVWIIAVCEVIRATQNMVQIVTIMHDTKNRDNAYSEFIKSLKSTDREFAKRMLEEYNDKYGE |
Ga0326512_1000794319 | 3300032038 | Rumen | MIVAVWIIAICEIIRAIQNMIQIAAYHHDSSKRDNAYDEFIKSLKHDDAEFVKRMLEGFEKQEYLK |
Ga0326512_1002806311 | 3300032038 | Rumen | MGLDRIYEKERYEMSMAIWIIAICEIIRMLQNFVQIHTIIHDTSARDNAYAEFVKSLKSTDREFVKRLLEEFEEGAGDSE |
Ga0326512_101731286 | 3300032038 | Rumen | MIIALWIIAICEVVRAIQNAIQIRSILQDTTARDNVYAEFIKSLKSTDKVFVRQMLEEFERQEGAEKE |
Ga0326512_102990343 | 3300032038 | Rumen | MIIAAIWIIAACEVIRMVQNCVQIMTIKHDTSARDNAYAEFVKSLKVTDREFVKRVLSEFEEGGEDEG |
Ga0326512_103100264 | 3300032038 | Rumen | MMKIALWIIAICEVVRAVQNAVQLRAIKRDTGARDNAYAEFVKSLKMSDRQFVERMLKEFERQEGEG |
Ga0326512_104435093 | 3300032038 | Rumen | MKTALWIIAICEVIRAAQNMVQIMTIKHDTKGRDNAYAEFVKNLKQSDREFVRRMLDEFEMQERE |
Ga0326512_104771273 | 3300032038 | Rumen | MKIAIWVIAICEVVRILQNMAQLMMVHHDTGARDNAYAEFVKSLKDTDEDFVENLLREFERERSNNE |
Ga0326512_105135614 | 3300032038 | Rumen | MIIALWIIAICEVVRAVQNAIQIRSILQDTTARDNVYAEFVKSLKSTDREFVRQMLEEFERQEGAEKE |
Ga0326512_110035703 | 3300032038 | Rumen | MKTALWIIALCEVVRAVQNAVQIRAIKRDTGVRDNAYSEFVKSLKMNDRQFVERMLKEFEKQEGE |
Ga0310690_101258626 | 3300033463 | Rumen | MTVALWIIAICEVVRALQNMVQLMAIRHDMKQRDNAYAEFVKSLKDTDREFVRKVLEEFEKQDGEQ |
Ga0310690_103951192 | 3300033463 | Rumen | MTIAIWIIAVCEIIRAAQNMLQIAMLKHDTGARDNAYEEFVKSLKDTDKEFVRKMLEEFEEQNNDCIKNDR |
Ga0310690_105351153 | 3300033463 | Rumen | MTVALWIIAICEVVRALQNMVQIMATRHDLKQRDNAYAEFVKSLKDTDREFVKKMLEECEKLDKENENSTHE |
Ga0310690_120968712 | 3300033463 | Rumen | MIIAIWIIAICEVIRAIQNMIQIMTIRHDTKGRDNAYAEFVKSLKRTDREFVRQMLEEFEKAERRTDEQIR |
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