Metagenome / Metatranscriptome Family F093917

Basic Information
Family ID	F093917
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	53 residues
Representative Sequence	MLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF
Number of Associated Samples	84
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.98 %
% of genes near scaffold ends (potentially truncated)	31.13 %
% of genes from short scaffolds (< 2000 bps)	78.30 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (84.906 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (10.377 % of family members)
Environment Ontology (ENVO)	Unclassified (22.642 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.283 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 3.92% Coil/Unstructured: 62.75%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13581	HATPase_c_2	55.66
PF01740	STAS	14.15
PF02954	HTH_8	9.43
PF01112	Asparaginase_2	2.83
PF07043	DUF1328	0.94
PF04932	Wzy_C	0.94
PF03683	UPF0175	0.94
PF01523	PmbA_TldD	0.94
PF13492	GAF_3	0.94
PF07228	SpoIIE	0.94
PF00067	p450	0.94
PF07969	Amidohydro_3	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1446	Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamily	Amino acid transport and metabolism [E]	2.83
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.94
COG2124	Cytochrome P450	Defense mechanisms [V]	0.94
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.94
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.91 %
Unclassified	root	N/A	15.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.91 %
Unclassified	root	N/A	15.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.91 %
Unclassified	root	N/A	15.09 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.66 %
Unclassified	root	N/A	15.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.32 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	3.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.32 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	2.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000816\|AF_2010_repII_A10DRAFT_1016263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300001161\|JGI12135J13285_101705	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300001686\|C688J18823_10053922	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300002675\|Ga0005473J37261_112735	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300003322\|rootL2_10178475	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300003572\|Ga0007424J51698_1022841	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300003692\|Ga0007426_1053720	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300004100\|Ga0058904_1259388	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300004117\|Ga0058893_1326239	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300004139\|Ga0058897_11089750	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300004463\|Ga0063356_101935051	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300004479\|Ga0062595_101805972	Not Available	581	Open in IMG/M
3300004479\|Ga0062595_102667841	Not Available	502	Open in IMG/M
3300004785\|Ga0058858_1357894	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300004801\|Ga0058860_11984757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	866	Open in IMG/M
3300005294\|Ga0065705_11183900	Not Available	505	Open in IMG/M
3300005329\|Ga0070683_102353393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005330\|Ga0070690_100983300	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300005332\|Ga0066388_103288706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300005332\|Ga0066388_104401479	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300005335\|Ga0070666_10078415	All Organisms → cellular organisms → Bacteria	2255	Open in IMG/M
3300005335\|Ga0070666_10211425	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300005341\|Ga0070691_10126751	All Organisms → cellular organisms → Bacteria → Acidobacteria	1290	Open in IMG/M
3300005353\|Ga0070669_100000027	All Organisms → cellular organisms → Bacteria	166637	Open in IMG/M
3300005437\|Ga0070710_10085964	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300005547\|Ga0070693_101254627	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300005578\|Ga0068854_100478613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300005587\|Ga0066654_10472229	Not Available	686	Open in IMG/M
3300005616\|Ga0068852_101245639	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300005841\|Ga0068863_100596102	Not Available	1093	Open in IMG/M
3300006034\|Ga0066656_10066333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	2121	Open in IMG/M
3300006358\|Ga0068871_102203759	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300006852\|Ga0075433_10421185	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300006852\|Ga0075433_11174126	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300006854\|Ga0075425_100088273	All Organisms → cellular organisms → Bacteria	3513	Open in IMG/M
3300006871\|Ga0075434_100036894	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	4836	Open in IMG/M
3300006904\|Ga0075424_100048376	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	4438	Open in IMG/M
3300009411\|Ga0115017_1138584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300009840\|Ga0126313_11838392	Not Available	507	Open in IMG/M
3300010036\|Ga0126305_10000837	All Organisms → cellular organisms → Bacteria	13376	Open in IMG/M
3300010038\|Ga0126315_10118870	All Organisms → cellular organisms → Bacteria → Acidobacteria	1537	Open in IMG/M
3300010045\|Ga0126311_10735941	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300010358\|Ga0126370_11615210	Not Available	621	Open in IMG/M
3300010359\|Ga0126376_11491474	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300010362\|Ga0126377_11720759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300010371\|Ga0134125_10000009	All Organisms → cellular organisms → Bacteria	339509	Open in IMG/M
3300010399\|Ga0134127_10719860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300010400\|Ga0134122_10007752	All Organisms → cellular organisms → Bacteria → Acidobacteria	7998	Open in IMG/M
3300010400\|Ga0134122_10063250	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300010400\|Ga0134122_10078575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2578	Open in IMG/M
3300010400\|Ga0134122_10532018	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300010400\|Ga0134122_10638771	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300010400\|Ga0134122_10851517	Not Available	876	Open in IMG/M
3300010401\|Ga0134121_13069669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010870\|Ga0102750_10900437	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300011120\|Ga0150983_16317731	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300012132\|Ga0153978_1029885	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300012180\|Ga0153974_1123987	Not Available	596	Open in IMG/M
3300012212\|Ga0150985_100833666	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300012212\|Ga0150985_108863825	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300012212\|Ga0150985_113327383	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300012212\|Ga0150985_113568944	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300012212\|Ga0150985_114228732	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300012212\|Ga0150985_118303651	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
3300012469\|Ga0150984_107411841	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300012469\|Ga0150984_109579587	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300012469\|Ga0150984_118142719	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012683\|Ga0137398_11039216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012929\|Ga0137404_10004740	All Organisms → cellular organisms → Bacteria	9114	Open in IMG/M
3300012951\|Ga0164300_10701557	Not Available	613	Open in IMG/M
3300012960\|Ga0164301_10232649	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300012984\|Ga0164309_11940956	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300015158\|Ga0167622_1000566	All Organisms → cellular organisms → Bacteria	17040	Open in IMG/M
3300015199\|Ga0167647_1000296	All Organisms → cellular organisms → Bacteria	20013	Open in IMG/M
3300018432\|Ga0190275_10268458	All Organisms → cellular organisms → Bacteria → Acidobacteria	1656	Open in IMG/M
3300018465\|Ga0190269_10840078	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300018465\|Ga0190269_11665830	Not Available	536	Open in IMG/M
3300018468\|Ga0066662_10016243	All Organisms → cellular organisms → Bacteria → Acidobacteria	4045	Open in IMG/M
3300018468\|Ga0066662_11102909	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300018476\|Ga0190274_10287221	All Organisms → cellular organisms → Bacteria → Acidobacteria	1521	Open in IMG/M
3300021432\|Ga0210384_10812128	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300022718\|Ga0242675_1006223	All Organisms → cellular organisms → Bacteria → Acidobacteria	1328	Open in IMG/M
3300022718\|Ga0242675_1088551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300025903\|Ga0207680_10063569	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300025903\|Ga0207680_10198788	Not Available	1365	Open in IMG/M
3300025903\|Ga0207680_11152601	Not Available	553	Open in IMG/M
3300025907\|Ga0207645_10089147	All Organisms → cellular organisms → Bacteria → Acidobacteria	1983	Open in IMG/M
3300025981\|Ga0207640_10813863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300026142\|Ga0207698_12257809	Not Available	556	Open in IMG/M
3300027029\|Ga0208731_1004855	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300027030\|Ga0208240_1037270	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300027257\|Ga0208996_1055822	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300027524\|Ga0208998_1001060	All Organisms → cellular organisms → Bacteria	3551	Open in IMG/M
3300027684\|Ga0209626_1001413	All Organisms → cellular organisms → Bacteria	5161	Open in IMG/M
3300028554\|Ga0302047_10260428	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300028577\|Ga0265318_10283413	Not Available	604	Open in IMG/M
3300029636\|Ga0222749_10116016	All Organisms → cellular organisms → Bacteria → Acidobacteria	1273	Open in IMG/M
3300031231\|Ga0170824_101750358	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300031231\|Ga0170824_112333538	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300031446\|Ga0170820_15763375	Not Available	551	Open in IMG/M
3300031493\|Ga0314826_112445	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300031716\|Ga0310813_10704767	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300032180\|Ga0307471_101778663	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300034172\|Ga0334913_001511	All Organisms → cellular organisms → Bacteria → Acidobacteria	8574	Open in IMG/M
3300034268\|Ga0372943_0000105	All Organisms → cellular organisms → Bacteria	32982	Open in IMG/M
3300034402\|Ga0334960_000161	All Organisms → cellular organisms → Bacteria	32692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.04%
Host-Associated	Host-Associated	33.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.09%
Plants	Host-Associated → Plants	30.19%
Human	Host-Associated → Human	1.89%
Fungi	Host-Associated → Fungi	1.89%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.21%
Digestive System	Host-Associated → Human → Digestive System	1.89%
Mycelium	Host-Associated → Fungi → Mycelium	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Roots	Host-Associated → Plants → Roots	0.94%
Rhizome	Host-Associated → Plants → Rhizome	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.17%
Loam	Environmental → Terrestrial → Soil → Loam	17.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.72%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.55%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300001161	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002675	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF122 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003572	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003692	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_42 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004117	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009411	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010870	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012132	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA062 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027257	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031493	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A10DRAFT_10162632	3300000816	Forest Soil	MLELVRKHVAIPFLPGKVILSAALLGSFGWLLVHDLVHPAVVYALQLYLSF*
JGI12135J13285_1017051	3300001161	Forest Soil	MLDSVRKHVAVPEIPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
C688J18823_100539222	3300001686	Soil	MLDSVRKYVAVPDVPIKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0005473J37261_1127351	3300002675	Forest Soil	RNRMPDLVRKYISVAVPQAPVKVLLSAATLASFGWLLAHGLVHPIVIYALQLYLSF*
rootL2_101784752	3300003322	Sugarcane Root And Bulk Soil	MIESIRKHVAIPRVPVKLLLSAGVLSSFGVLLAHDQIHPLVLYALQLYLSF*
Ga0007424J51698_10228411	3300003572	Avena Fatua Rhizosphere	RNAMLDSVRKYVAVPDVPIKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0007426_10537201	3300003692	Avena Fatua Rhizosphere	NAMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0058904_12593881	3300004100	Forest Soil	AAVPQVPVKALLSVATLASFGWLLAHGLVHPIVIYALQLYLSF*
Ga0058893_13262391	3300004117	Forest Soil	NRMPDLVRKYIAVAVPQVPAKVLLSAATLASFGWLLAHGLVHPIVIYALQLYLSF*
Ga0058897_110897503	3300004139	Forest Soil	RMPYLVRKYIAAVPQVPVKVVLSAAILTSFGWLLAHGLVHPIVIYALQLYLSF*
Ga0063356_1019350511	3300004463	Arabidopsis Thaliana Rhizosphere	ARMRRNDMLDSIRRHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQIYLSF*
Ga0062595_1018059721	3300004479	Soil	MLDSVRKHVAVPDVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0062595_1026678411	3300004479	Soil	MLDSVRRHVAVPYVPVKVLLSVGSLASFGWLLSHDSIHPIVIYALQLYLSF*
Ga0058858_13578943	3300004785	Host-Associated	MLDSVRKHVAVPQVPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0058860_119847573	3300004801	Host-Associated	RNVMLDSVRKQVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0065705_111839002	3300005294	Switchgrass Rhizosphere	MLDSVRKHIAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQIYLSF*
Ga0070683_1023533932	3300005329	Corn Rhizosphere	MLDSVRKHVAVPQFPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0070690_1009833002	3300005330	Switchgrass Rhizosphere	MLDSVRKQVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0066388_1032887062	3300005332	Tropical Forest Soil	MLDSVRKHIAVPQVPVTVLLSVSTIASFLWLLSRDLVHPIVVYALEVYLS
Ga0066388_1044014791	3300005332	Tropical Forest Soil	MLQSIRKHVTIPAIPVKLVLSAGALASFGVLLAHDQIHPLVLYALQLYLSF*
Ga0070666_100784151	3300005335	Switchgrass Rhizosphere	MLDSVRKQVAVPYVPAKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0070666_102114252	3300005335	Switchgrass Rhizosphere	MLQSIRKHVAIPHVPVKLVLSAGALASFGVLLAHDQIHPLVLYALQLYLSF*
Ga0070691_101267511	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MLDSARKQFAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0070669_100000027117	3300005353	Switchgrass Rhizosphere	MLDSVRKHVAVSYVPVKSGSVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0070710_100859642	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MIETIRKHVAIPHVPVKLLLSAGVLSSFGVLLAHDQIHPLVVYALQLYLSF*
Ga0070693_1012546271	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MLQAIRKHVAIPRLAVKLPVKLVLSAGALASFGVLLAHDQIHPLVLYALQLYLSF*
Ga0068854_1004786132	3300005578	Corn Rhizosphere	MLDSARKLVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0066654_104722291	3300005587	Soil	MLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0068852_1012456392	3300005616	Corn Rhizosphere	MRRNVMLDSVRKHVAVPQFPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0068863_1005961021	3300005841	Switchgrass Rhizosphere	MLESIRKHAAIVPHVPGKVVLSAGVLTSFAVLLANDLVHPIVIYALQLYLSF*
Ga0066656_100663334	3300006034	Soil	MRRNAMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0068871_1022037592	3300006358	Miscanthus Rhizosphere	MLELVRKNVAVPHVPASVLWSIATVVSFGWLLAHNAVRPIVIYAVQLYLSF*
Ga0075433_104211853	3300006852	Populus Rhizosphere	MRRNAMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0075433_111741262	3300006852	Populus Rhizosphere	VPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0075425_1000882734	3300006854	Populus Rhizosphere	MLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0075434_1000368941	3300006871	Populus Rhizosphere	SVRKHVVVPDVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0075424_1000483762	3300006904	Populus Rhizosphere	MLDSVRKHVVVPDVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0115017_11385842	3300009411	Soil	VMLDSVRKHVAVPEIPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0126313_118383921	3300009840	Serpentine Soil	MEGRRMRRNVMLDSVRKQVAVSYLPVKSIPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0126305_1000083711	3300010036	Serpentine Soil	MLDSVRKQVAVSYLPVNSVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0126315_101188702	3300010038	Serpentine Soil	MRRNVMLDSVRKQVAVSYLPVKSVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0126311_107359411	3300010045	Serpentine Soil	TAELGMVWQRPCDGVGAMRRNVMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0126370_116152101	3300010358	Tropical Forest Soil	MPYLVRKLIAIPEVPVKVLLSAATLGSFGWLLAHGLVHPIVVYALQLYLSF*
Ga0126376_114914742	3300010359	Tropical Forest Soil	MLDSIRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0126377_117207592	3300010362	Tropical Forest Soil	MRRNVMLDSVRKHVAVPYIPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQIYLSF*
Ga0134125_10000009185	3300010371	Terrestrial Soil	MRRNAMLDSVRKHVAVPDVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0134127_107198601	3300010399	Terrestrial Soil	MRRKVMLDSVRKHVAVPFVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0134122_100077524	3300010400	Terrestrial Soil	MLDSVRKHIAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF*
Ga0134122_100632504	3300010400	Terrestrial Soil	MRRNDMLDSVRRHVAVPYVPVKVLLSVGSIASFGWLLSHDLVHPIVIYALQIYLSF*
Ga0134122_100785754	3300010400	Terrestrial Soil	MRRNAMLELVRKNVAVPHVPASVLWSIATVVSFGWLLAHNAVRPIVIYAVQLYLSF*
Ga0134122_105320182	3300010400	Terrestrial Soil	MLDSIRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQVYLSF*
Ga0134122_106387712	3300010400	Terrestrial Soil	MRRNAMLDSARKQFAVPYVPVKVLMSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0134122_108515172	3300010400	Terrestrial Soil	MLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQVYLSF*
Ga0134121_130696692	3300010401	Terrestrial Soil	RMRRNAMLDSARKLVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0102750_109004372	3300010870	Soil	VMLDSVRKHVAVPQVPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0150983_163177313	3300011120	Forest Soil	KSMPYLVRRTLAAVPQVPVKALLSVATLASFGWLLAHGLVHPIVIYALQLYLSF*
Ga0153978_10298851	3300012132	Attine Ant Fungus Gardens	MPDLVRKRIAVAVPQVPVKVLLSAATLASFGWLLAHGLVHPIVIYALQLYLSF*
Ga0153974_11239872	3300012180	Attine Ant Fungus Gardens	VAEDEENPMPDLVRRYIAVPQVPVKVLLSAATLASFGWLLAHGLVHPIVIYALQLYLSF*
Ga0150985_1008336661	3300012212	Avena Fatua Rhizosphere	RVLFRSAMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF*
Ga0150985_1088638252	3300012212	Avena Fatua Rhizosphere	MRRNVMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0150985_1133273832	3300012212	Avena Fatua Rhizosphere	MRRNAMLELVRKNVAVPHVPATVLWSVATVVSFGWLLAHNAVRPIVIYAVQLYLSF*
Ga0150985_1135689441	3300012212	Avena Fatua Rhizosphere	VMLDSVRKHVAVPEIPVQVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0150985_1142287321	3300012212	Avena Fatua Rhizosphere	MRRNVMLDSVRKHVAVPQVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0150985_1183036511	3300012212	Avena Fatua Rhizosphere	AMIQTIRKHVAIPHVPVKLLLSAGVVSSFGVLLAHDQIHPLVLYALQLYLSF*
Ga0150984_1074118411	3300012469	Avena Fatua Rhizosphere	AVPEIPVKALLSVGSLASFGWLLSHGLIHPIVIYALQLYLSL*
Ga0150984_1095795871	3300012469	Avena Fatua Rhizosphere	SPMLQSIRKHVAVPHVPVKLMLSAGALASFGVLLAHDQIHPLVLYALQLYLSF*
Ga0150984_1181427191	3300012469	Avena Fatua Rhizosphere	HVAVPQVPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0137398_110392162	3300012683	Vadose Zone Soil	MRRNAMLDSIRKHVVVPDLPVKALLSVGSLASFSWLLSHDLVHPIVIYALQLFLS
Ga0137404_100047406	3300012929	Vadose Zone Soil	MLDTIRKHVAIPHVPVKLLLSAGVLSSFGVLLAHDQIHPLVVYALQLYLSF*
Ga0164300_107015572	3300012951	Soil	MRRNVMLDSVRKHVAVPQVPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0164301_102326492	3300012960	Soil	MLQSIRKHVAIPQIPLNLVLSAGAVASFGVLLAHDQIHPLVLYALQLYLSF*
Ga0164309_119409561	3300012984	Soil	QSIRKHVAIPRIPVNLVLSAGAVASFGVLLAHDQIHPLVLYALQLYLSF*
Ga0167622_10005666	3300015158	Glacier Forefield Soil	MRRNVMLDSVRKHAAVPYVPVKVLLSMGSLASFGWLLSHDLVHPIVIYALQLYLSL*
Ga0167647_10002963	3300015199	Glacier Forefield Soil	MLQSIRKHVAVPHVPVKLMLSAGALASFGVLLAHDQIHPLVLYALQLYLSF*
Ga0190275_102684582	3300018432	Soil	MILESVRKHAAAIPQVPSRLLLGAGALTSFAVLLANDMVHPLVVYALQLYLSF
Ga0190269_108400782	3300018465	Soil	MLDSVRKHVAIPHVSGKVLLSVGTLTSFGWFLFHDSIHPIVIYALQLYLSF
Ga0190269_116658302	3300018465	Soil	MLDSVRKHVAVPYVPVKALLSVGSLASFGWLLSQDMVHPIVIYALQLFLAF
Ga0066662_100162435	3300018468	Grasslands Soil	MRRNAMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF
Ga0066662_111029091	3300018468	Grasslands Soil	GRGRIAMIEMIRKHVAIPRVPVKLLLSAGVLSSFGVLLAHDQIHPLVVYALQLYLSF
Ga0190274_102872211	3300018476	Soil	MLDSVRKQVAVSYLPVKSIPVKVLLSVASLASFGWLLSHDLVHPIVIYALQLYLSF
Ga0210384_108121282	3300021432	Soil	MPDLVRKYISVAVPQAPVKVLLSAATLASFGWLLAHGLVHPIVIYALQLYLSF
Ga0242675_10062231	3300022718	Soil	NSMPYLVRRTLAAVPQVPVKALLSVATLASFGWLLAHGLVHPIVIYALQLYLSF
Ga0242675_10885511	3300022718	Soil	MRRNVMLDSVRKHVAVPEIPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0207680_100635694	3300025903	Switchgrass Rhizosphere	MLDSVRKHVAVPQFPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0207680_101987882	3300025903	Switchgrass Rhizosphere	MLQSIRKHVAIPHVPVKLVLSAGALASFGVLLAHDQIHPLVLYALQLYLSF
Ga0207680_111526011	3300025903	Switchgrass Rhizosphere	MLDSVRKQVAVPYVPAKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSF
Ga0207645_100891472	3300025907	Miscanthus Rhizosphere	MLDSVRKHVAVPQVPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0207640_108138632	3300025981	Corn Rhizosphere	MLDSARKLVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF
Ga0207698_122578091	3300026142	Corn Rhizosphere	MRRNVMLDSVRKHVAVPQFPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0208731_10048552	3300027029	Forest Soil	MPYLVRRTLAAVPQVPVKALLSVATLASFGWLLAHGLVHPIVIYALQLYLSF
Ga0208240_10372701	3300027030	Forest Soil	VDAVGSGLALYQAEDEEKAMPDLVRKSISAVPQVPVKVLLSVATLTSFGWLLAHGLVHPIVIYALQLYLSF
Ga0208996_10558222	3300027257	Forest Soil	SVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0208998_10010604	3300027524	Forest Soil	MLDSVRKHVAVPEIPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0209626_10014132	3300027684	Forest Soil	MLQSIRKHAAIPHVPVKLLLSLGTLTSFAVLLTHDLVHPIFVYALQLYLSF
Ga0302047_102604282	3300028554	Soil	VMLDSVRKHVAVPQVPVKVMLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0265318_102834132	3300028577	Rhizosphere	MLDSIRKHVAVPDVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLFLSF
Ga0222749_101160162	3300029636	Soil	MPYLVRKYIAAVPQVPVKVVLSAAILTSFGWLLAHGLVHPIVIYALQLYLSF
Ga0170824_1017503581	3300031231	Forest Soil	AVPDVPVKVLLSVGALASFGWLLSHDLVHPIVIYALQLFLSF
Ga0170824_1123335381	3300031231	Forest Soil	NGAGEGGPTMLESIRKHVAVPHIPVKLVLSAGALASFGVLLAHDQIHPIVLYALQLYLSF
Ga0170820_157633751	3300031446	Forest Soil	MLESIRKHVAVPHVPVKLVLSAGALASFGVLLAHDQIHPIVLYALQLYLSF
Ga0314826_1124453	3300031493	Soil	SVRKHVAVPYVPVRALLSVGSLASFGWLLSQDMVHPIVIYALQLFLAF
Ga0310813_107047672	3300031716	Soil	MLDSVRKQVVVPYVPVKVLLSVGSVASFGWLLFHDLVHPIVIYALQLYLSF
Ga0307471_1017786631	3300032180	Hardwood Forest Soil	MRVGRMRRNAMLDSVRKHVAVPDVPVKMLLSVGSLASFGWLLSHDLVHPIVIYALQLFLS
Ga0334913_001511_7172_7357	3300034172	Sub-Biocrust Soil	MTGERMRRNAMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLS
Ga0372943_0000105_19881_20051	3300034268	Soil	MRRNVMLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVIYALQLYLSL
Ga0334960_000161_3265_3420	3300034402	Sub-Biocrust Soil	MLDSVRKHVAVPYVPVKVLLSVGSLASFGWLLSHDLVHPIVVYALQLYLSF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093917

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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