Metagenome Family F093421

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093421
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	64 residues
Representative Sequence	MTQEARGNPEALRDALKRQDDPEAHDRSLIVERLAWTPEQRLEANAAFLRFYFSVRPEGPLIREE
Number of Associated Samples	75
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.48 %
% of genes near scaffold ends (potentially truncated)	19.81 %
% of genes from short scaffolds (< 2000 bps)	77.36 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (19.811 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.962 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.63% β-sheet: 0.00% Coil/Unstructured: 62.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01329	Pterin_4a	5.66
PF14833	NAD_binding_11	1.89
PF04338	DUF481	1.89
PF01161	PBP	1.89
PF00069	Pkinase	1.89
PF05960	DUF885	1.89
PF07593	UnbV_ASPIC	1.89
PF13145	Rotamase_2	0.94
PF06114	Peptidase_M78	0.94
PF13541	ChlI	0.94
PF01381	HTH_3	0.94
PF13560	HTH_31	0.94
PF00593	TonB_dep_Rec	0.94
PF13640	2OG-FeII_Oxy_3	0.94
PF13964	Kelch_6	0.94
PF12704	MacB_PCD	0.94
PF01510	Amidase_2	0.94
PF13505	OMP_b-brl	0.94
PF04014	MazE_antitoxin	0.94
PF08447	PAS_3	0.94
PF05685	Uma2	0.94
PF14559	TPR_19	0.94
PF13360	PQQ_2	0.94
PF05237	Obsolete Pfam Family	0.94
PF13620	CarboxypepD_reg	0.94
PF02540	NAD_synthase	0.94
PF10677	DUF2490	0.94
PF01042	Ribonuc_L-PSP	0.94
PF07859	Abhydrolase_3	0.94
PF13439	Glyco_transf_4	0.94
PF01975	SurE	0.94
PF01668	SmpB	0.94
PF13635	DUF4143	0.94
PF13564	DoxX_2	0.94
PF00190	Cupin_1	0.94
PF12228	DUF3604	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.55
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	5.66
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.89
COG3137	Putative salt-induced outer membrane protein YdiY	Cell wall/membrane/envelope biogenesis [M]	1.89
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.89
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.94
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.94
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	0.94
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.94
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.23 %
Unclassified	root	N/A	3.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.23 %
Unclassified	root	N/A	3.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.23 %
Unclassified	root	N/A	3.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.58 %
Unclassified	root	N/A	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.47 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.75 %
Unclassified	root	N/A	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Unclassified	root	N/A	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.94 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Unclassified	root	N/A	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.94 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Unclassified	root	N/A	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.94 %
Euzebyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Unclassified	root	N/A	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.94 %
unclassified Euzebyaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Unclassified	root	N/A	3.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %
Euzebyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	0.94 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_62645_len_6358_cov_14_911293	All Organisms → cellular organisms → Bacteria → Proteobacteria	6408	Open in IMG/M
2228664021\|ICCgaii200_c0367261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101380032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300003319\|soilL2_10173377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300004114\|Ga0062593_100735189	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300004157\|Ga0062590_102106556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300004643\|Ga0062591_102461278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005294\|Ga0065705_10491095	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005445\|Ga0070708_100083401	All Organisms → cellular organisms → Bacteria	2898	Open in IMG/M
3300005446\|Ga0066686_10484322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300005556\|Ga0066707_10180199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300005764\|Ga0066903_101907961	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300005836\|Ga0074470_11737305	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300006854\|Ga0075425_102102092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300009012\|Ga0066710_100010051	All Organisms → cellular organisms → Bacteria	9445	Open in IMG/M
3300009012\|Ga0066710_103203521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300009038\|Ga0099829_10400326	Not Available	1135	Open in IMG/M
3300009078\|Ga0105106_11142132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300009089\|Ga0099828_10064975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3073	Open in IMG/M
3300009090\|Ga0099827_10201124	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300009137\|Ga0066709_100077721	All Organisms → cellular organisms → Bacteria	3940	Open in IMG/M
3300009137\|Ga0066709_101674773	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300009431\|Ga0120401_1115314	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300009444\|Ga0114945_10308733	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300009444\|Ga0114945_10314165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300009444\|Ga0114945_10563700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300009444\|Ga0114945_10914279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300009691\|Ga0114944_1195380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	807	Open in IMG/M
3300010029\|Ga0105074_1013385	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300010043\|Ga0126380_11929251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	538	Open in IMG/M
3300010046\|Ga0126384_11413734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300010366\|Ga0126379_10940215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300010379\|Ga0136449_101004671	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300010391\|Ga0136847_10299236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300010391\|Ga0136847_10443839	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300010391\|Ga0136847_10523162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300010391\|Ga0136847_10912451	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300010391\|Ga0136847_13153248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300010398\|Ga0126383_12951135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300011438\|Ga0137451_1030979	Not Available	1552	Open in IMG/M
3300012113\|Ga0137328_1025618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300012146\|Ga0137322_1002092	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300012201\|Ga0137365_10103022	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300012204\|Ga0137374_10273006	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300012204\|Ga0137374_10311172	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300012204\|Ga0137374_10333262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1231	Open in IMG/M
3300012204\|Ga0137374_11244246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012350\|Ga0137372_10216113	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300012354\|Ga0137366_10055998	All Organisms → cellular organisms → Bacteria	3017	Open in IMG/M
3300012532\|Ga0137373_10426209	Not Available	1026	Open in IMG/M
3300014272\|Ga0075327_1227542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300017659\|Ga0134083_10583458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300017974\|Ga0187777_10034529	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300018031\|Ga0184634_10089146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1334	Open in IMG/M
3300018031\|Ga0184634_10502094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300018063\|Ga0184637_10014801	All Organisms → cellular organisms → Bacteria	4685	Open in IMG/M
3300018063\|Ga0184637_10105476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1735	Open in IMG/M
3300018063\|Ga0184637_10135364	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300018063\|Ga0184637_10658553	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300018074\|Ga0184640_10159255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1010	Open in IMG/M
3300018077\|Ga0184633_10285505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300018077\|Ga0184633_10530350	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300018077\|Ga0184633_10576415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300018079\|Ga0184627_10204061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300018079\|Ga0184627_10395443	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300018079\|Ga0184627_10500528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300018082\|Ga0184639_10490536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300018082\|Ga0184639_10581529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300018082\|Ga0184639_10666651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300018084\|Ga0184629_10192328	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300019487\|Ga0187893_10101019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2542	Open in IMG/M
3300021560\|Ga0126371_10835302	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300021560\|Ga0126371_12965716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
(restricted) 3300024054\|Ga0233425_10077138	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300025146\|Ga0209322_10121623	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300025174\|Ga0209324_10351890	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300025289\|Ga0209002_10037355	All Organisms → cellular organisms → Bacteria	3437	Open in IMG/M
3300025324\|Ga0209640_10048628	All Organisms → cellular organisms → Bacteria	3689	Open in IMG/M
3300025556\|Ga0210120_1091595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300025556\|Ga0210120_1102571	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300026535\|Ga0256867_10104155	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300026535\|Ga0256867_10220708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300026548\|Ga0209161_10425654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300027815\|Ga0209726_10351065	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300027964\|Ga0256864_1000605	All Organisms → cellular organisms → Bacteria	12097	Open in IMG/M
3300027964\|Ga0256864_1164111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
(restricted) 3300027997\|Ga0255057_10069992	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
(restricted) 3300027997\|Ga0255057_10379557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300030006\|Ga0299907_10211579	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300030006\|Ga0299907_10862774	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300030606\|Ga0299906_10350810	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300030619\|Ga0268386_10411943	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300030620\|Ga0302046_10014983	All Organisms → cellular organisms → Bacteria → Proteobacteria	6512	Open in IMG/M
3300030620\|Ga0302046_10062028	All Organisms → cellular organisms → Bacteria	3035	Open in IMG/M
3300031949\|Ga0214473_10007386	All Organisms → cellular organisms → Bacteria	13043	Open in IMG/M
3300031949\|Ga0214473_11475378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300031965\|Ga0326597_10090737	All Organisms → cellular organisms → Bacteria	3736	Open in IMG/M
3300032160\|Ga0311301_10972696	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300032205\|Ga0307472_102729032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300032516\|Ga0315273_10076962	All Organisms → cellular organisms → Bacteria	4538	Open in IMG/M
3300033407\|Ga0214472_10035075	All Organisms → cellular organisms → Bacteria	5134	Open in IMG/M
3300033407\|Ga0214472_10569979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300033433\|Ga0326726_10922456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300033814\|Ga0364930_0303096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300034177\|Ga0364932_0267087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.32%
Aquatic	Environmental → Aquatic	37.74%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.55%
Sediment	Environmental → Aquatic → Sediment	19.81%
Freshwater	Environmental → Aquatic → Freshwater	8.49%
Marine	Environmental → Aquatic → Marine	4.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.72%
Floodplain	Environmental → Terrestrial → Floodplain	1.89%
Peat	Environmental → Terrestrial → Peat	0.94%
Cave	Environmental → Terrestrial → Cave	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	19.81%
Lake	Environmental → Aquatic → Freshwater → Lake	6.60%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.72%
Loam	Environmental → Terrestrial → Soil → Loam	2.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.89%
Gulf	Environmental → Aquatic → Marine → Gulf	1.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Coastal	Environmental → Aquatic → Marine → Coastal	0.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	19.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.49%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.66%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	4.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.94%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	16.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.66%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	4.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.89%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.94%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.94%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.94%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009431	Combined Assembly of Gp0137033, Gp0137034	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012113	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT100_2	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024054 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MG	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027964	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeq	Environmental	Open in IMG/M
3300027997 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00392220	2088090004	Soil	MTEPANPMDVLREALERQENGEAHDRGLIVERLSWTPEQRLEANAAFLRFLLEVRPEGPLIRE
ICCgaii200_03672612	2228664021	Soil	MSEEREPKDEAWQEALRQQADEDAHDRSLIVERLAWTPEQRLDANAAFLQFYWRMRPEGPLIRD
INPhiseqgaiiFebDRAFT_1013800322	3300000364	Soil	MEAESADESLAIETWRRALARQADEDAHDRGLIVERLGWTPEERLEANAAFLRFYWAMRPEGPLIRD*
soilL2_101733771	3300003319	Sugarcane Root And Bulk Soil	MRDDAALQRALARQAGGDDHDAGLIVERLAWTPEQRLEANAAFLRFYYSVRPAGPLIRED
Ga0062593_1007351892	3300004114	Soil	MSEEREPKDEAWQEALRQQADEDAHDRSLIVERLAWTPEQRLDANAAFLQFYWRMRPEGPLIRD*
Ga0062590_1021065562	3300004157	Soil	MSWERDPNDEAWLEVLRQQADAVAHDRSLIVERLSWTPEQRLDANAAFLRFYWRMRPEGPLIRD*
Ga0062591_1024612781	3300004643	Soil	MSEEREPKDEAWQEALRQQADEDAHDRSLIVERLAWTPEQRLDANAAFLQFYWRMRPEGP
Ga0065705_104910952	3300005294	Switchgrass Rhizosphere	LNDVLPDADVLRDLIAQQHDPDAHDRSLIVERLSWTPEQRLEANAAFLRFYLAVRPSGPVIRDE*
Ga0070708_1000834012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQELLEKQGDGDFHDRSLIVERLAWTPEQRLEANAEFLRFYFSVRPEGPLIREE*
Ga0066686_104843221	3300005446	Soil	MAIPGAVDEAAIREALRLQQADPDAHDRRLIVERLGWTPEERLEANAAFLRFYLSLRPDGPLIRD*
Ga0066707_101801992	3300005556	Soil	MAIPGAVDEAAIREALRLQQADPDAHDRSLIVERLGWTPEERLEANAAFLRFYLSLRPDGPLIRD*
Ga0066903_1019079612	3300005764	Tropical Forest Soil	MSRKDSVLDPDLREALRQQRDADAHDRSLIVERLAWTPEQRLEANAAFLRFYLKIRPDGPLIRDK*
Ga0074470_117373052	3300005836	Sediment (Intertidal)	MNKVERDERAVLAALELQGDDETHDRSLIVERLGWTPEQRLEANASFLRFYFAIRPEGPLIRE*
Ga0075425_1021020922	3300006854	Populus Rhizosphere	MPDAQPQSDDEALNKALQRQSDAADHDLSLIQERLSWTPEQRLEANAAFLRFYLAVRPNGPLIGDE*
Ga0066710_1000100517	3300009012	Grasslands Soil	MAIPGAVDEAAIREALRLQQADPDAHDRSLIVERLGWTPEERLEANATFLRFYLSLRPDGPLIRD
Ga0066710_1032035212	3300009012	Grasslands Soil	MSEEREPDIEAWREALRRQAELEAHDRSLMVERLAWTPEQRLEANTAFLRFYWGVRPQGPLISD
Ga0099829_104003263	3300009038	Vadose Zone Soil	MDRSDQSHSDVIQELLERQSDGDFHDRSLIVERLAWTPEQRLEANAAFLRFYLSIRPEGPLIREE*
Ga0105106_111421322	3300009078	Freshwater Sediment	VGDHEGKPDVSDDAAVRRALTRQAGGEDHDTGLIVERLAWTPEQRLEANAAFLRFYWAARPTGPLLREE*
Ga0099828_100649752	3300009089	Vadose Zone Soil	MSQSTRSQQDAIREALEKQGETETHDRSLIVERLAWTPEQRLEANAAFLRFYLAVRPEGPLIREE*
Ga0099827_102011242	3300009090	Vadose Zone Soil	MSQSTRSQQDAIREALEKQGDAEIHDRSLIVERLAWTPEQRLEANAAFLRFYLAVRPEGPLIREE*
Ga0066709_1000777212	3300009137	Grasslands Soil	MAIPGAVDEAAIREALRLQQADPDAHDRSLIVERLGWTPEERLEANATFLRFYLSLRPDGPLIRD*
Ga0066709_1016747732	3300009137	Grasslands Soil	MSEEREPDIEAWREALRRQAELEAHDRSLIVERRAWTPEQRLEANTAFLSFYWGVRPQGPLIRD*
Ga0120401_11153142	3300009431	Marine	MMLDDGAIKEADALAEALRQQNDDEAHDRSMIVERLRWTPEERLAANADFVRFYRNVRPGGPLIRE*
Ga0114945_103087332	3300009444	Thermal Springs	VNHPSADEQVLRDALAVQRDDEAHDRSLIRERLAWTPEQRLAANAAFLRFYLEVRPSGPLIDDE*
Ga0114945_103141652	3300009444	Thermal Springs	MAKHLSEDEAVRRALDRQQDDEAHDRSLIIERLAWTPEQRLAANAAFVRFYLSVRPSGPLIRDE*
Ga0114945_105637002	3300009444	Thermal Springs	VHHSSVDDEALRDALARQHEGEAHDRSLILERLAWTPEERLAANAAFLRFYLTTRPSGPLIRDDEG*
Ga0114945_109142792	3300009444	Thermal Springs	MPYADQPPLDNDALRKELVRQHDGEVHDRGLIVERLGWTPEQRLEANAAFLRFYLSVRPDGPLISGE*
Ga0114944_11953802	3300009691	Thermal Springs	VDDEVLRDAIARQREDGAHDRSLILERLAWTPEERLAANAAFLRFYFTARPSGPLIRDD*
Ga0105074_10133852	3300010029	Groundwater Sand	MAEPTDRDAARLDEAMERQKDDVFHDRSLIVERLAWTPEQRLEANAAFLRFYLSVRPEGPLIRE*
Ga0126380_119292512	3300010043	Tropical Forest Soil	MSGTEGELTAELREALKQQNDADAHDRSLIVERLSWTPEQRLEANAAFLRFYLKIRPDGPLIRDE*
Ga0126384_114137341	3300010046	Tropical Forest Soil	SPLGYTDSEMSQFDQIDLDAIREALEKQGDGDAHDRSLIVERLAWTPEQRLEANAAFLRFYLAIRPEGPLIRED*
Ga0134088_105888451	3300010304	Grasslands Soil	AWREALRRQADAEAHDRSLIVERLAWTPEQRLEANTAFQRFYWGVRPQGPLISD*
Ga0126379_109402153	3300010366	Tropical Forest Soil	DPDLREALRQQRDADAHDRSLIVERLAWTPEQRLEANAAFLRFYLKIRPDGPLIRDK*
Ga0136449_1010046711	3300010379	Peatlands Soil	MRGPSNPENDALAKALEEQADGEVHDRGLIVERLAWTPDQRLEANAAFVRLYLSIRPEGPLIRS*
Ga0136847_102992362	3300010391	Freshwater Sediment	MGETRSETDLLQEALARQDDSEAHDRSLIVERLAWTPEERLEANASFLRFYFAARPEGPLIRDE*
Ga0136847_104438392	3300010391	Freshwater Sediment	VETVDQTAVLEALRRQEEPDAHDRSLIVERLSWTPQQRLEANAAFLRFYLQVRPEGPLIRD*
Ga0136847_105231621	3300010391	Freshwater Sediment	MVDRTDPAETDAHREALRQLADDEAHDRSLIVERLAWTPEERLDANAAFLRWYWSIRPEGPLIRE*
Ga0136847_109124512	3300010391	Freshwater Sediment	MTGEAASNHADALLEALRQQGEPDAHDRGLILERLAWTPEQRLEANAAFLRFYLAVRPDGPLIRDE*
Ga0136847_131532481	3300010391	Freshwater Sediment	TRYTESRVHEKKPETDLLRQALERQQDDEAHDRSLIVERLAWTPEQRLEANAAFLRFYLSIRPEGPLIREE*
Ga0126383_129511352	3300010398	Tropical Forest Soil	RSSELRTLAYTGEAMSPSEDALDAELREALKQQHDADAHDRGLIVERLGWTPEQRLEANAAFLRFYLKIRPDGPLIRDE*
Ga0137451_10309792	3300011438	Soil	MIPKHPEYSEALREALKSQDDPEAHDRSLIVERLAWTPEQRLDANAAFLRFYFSVRPEGPLIREE*
Ga0137328_10256181	3300012113	Soil	VANPASPDEGALRAALARQHDPDAHDRSLILERLAWTPEQRLQANAMFLRFYLAARPTGPLVRDE*
Ga0137322_10020924	3300012146	Soil	VANPASPDDDALRAALARQHDPDAHDRSLILERLAWTPEQRLQANAMFLRFYLAARPTGPLVRDA*
Ga0137365_101030223	3300012201	Vadose Zone Soil	MSQDARGHPDALRDALKGQDDPEAHDRSLIVERLAWTPEQRLEANAEFLRFYFAVRPEGPLIREE*
Ga0137374_102730061	3300012204	Vadose Zone Soil	MTQEARGNPEALRDALKRQDDPEAHDRSLIVERLAWTPEQRLEANAAFLRFYFSVRPEGPLIREE*
Ga0137374_103111722	3300012204	Vadose Zone Soil	MSQDARGHPDALRDALKGQDDPEAHDRGLIVERLAWTPEQRLEANAEFLRFYFAVRPEGPLIREE*
Ga0137374_103332622	3300012204	Vadose Zone Soil	MPAVNRSQPSGYTRQAMIPERPEYSQALREALKSQDDPDSHDRGLIVERLAWTPEERLEANAAFLRFYFSVRPEGPLIREE*
Ga0137374_112442461	3300012204	Vadose Zone Soil	MTQEARGNPEALRDALKRQDDPEAHDRSLIIERLAWTPEQRLEANAAFLRFYFSVRPEGPLIREE*
Ga0137372_102161133	3300012350	Vadose Zone Soil	MATNRQPGDSALVRDAFETLADDAEHDRSLIVERLSWTPEQRLDAHTAFLRFYLAARPDGPLICDE*
Ga0137366_100559983	3300012354	Vadose Zone Soil	MSQSTRSQQDAIRQALEKQGETETHDRSLIVERLAWTPEQRLEANAAFLRFYLSVRPEGPLIREE*
Ga0137373_104262093	3300012532	Vadose Zone Soil	MSQFTRSQQDAIRQALEKQGETETHDRSLIVERLAWTPEQRLEANAAFLRFYLSVRPEGPLIREE*
Ga0075327_12275423	3300014272	Natural And Restored Wetlands	VADRTLEQSGREDSSLKRALAQQADGDAHDLGLIVERLGWTPEQRLEANAAFLRFYASARPTGPILSEE*
Ga0134083_105834581	3300017659	Grasslands Soil	MIEEREPNTEAWRQALRRQADAEAHDRSLIVERLAWTPEQRLEANTAFLRFYWGVRPEGPLIRD
Ga0187777_100345295	3300017974	Tropical Peatland	VSEETHLEDEILKRALAEQADGEVHDRSLIVERLSWTPEERLEANAAFVRFLLAVRPQGPLIRD
Ga0184634_100891463	3300018031	Groundwater Sediment	NHADAVLEALRQQAEPDAHDRGLILERLAWTPEQRIEANAAFLRFYLAVRPDGPLIRDK
Ga0184634_105020942	3300018031	Groundwater Sediment	VDHALPEAEVLRDLIARQHDADEHDRSLIVERLAWTPEQRLEANAAFLRFYLAIRPSGPLIRDE
Ga0184637_100148015	3300018063	Groundwater Sediment	MGEAASNHADALLEALRQQAEPDAHDRGLILERLAWTPEQRLEANAAFLRFYLAVRPDGPLIRDK
Ga0184637_101054761	3300018063	Groundwater Sediment	MGETKSEADLLNEALARQGEGEAHDRSLIVERLAWTPEERLEANASFLRFYFAVRPEGPLIRDE
Ga0184637_101353642	3300018063	Groundwater Sediment	VANHASSDDDALRAALARQHDPDAHDRSLILERLAWTPEQRLQANALFLRFYLAARPAGPRVRDE
Ga0184637_106585531	3300018063	Groundwater Sediment	GRELNTEPWREALRRQADVEAHDRSLIVERLAWTPEQRLEANAAFLRFYWGVRPEGPLIR
Ga0184640_101592552	3300018074	Groundwater Sediment	VANHASSDDDALRAALARQHDPDAHDRSLILERLAWTPEQRLQANAVFLRFYLAARPAGPRVRDE
Ga0184633_102855052	3300018077	Groundwater Sediment	VANHASPDDDALRAALARQHDPDAHDRSLILERLAWTPEQRLQANAVFLRFYLAARPAGPRIRDE
Ga0184633_105303502	3300018077	Groundwater Sediment	MSEPSRVDQNALSDALQRQADGEEHDRSLIVERLAWTPEQRLEANALFLRFYL
Ga0184633_105764152	3300018077	Groundwater Sediment	MTGEAVSNHADALLEALRQQGEPDAHDRGLILERLAWTPEQRLEANAAFLRFYLAARPDGPLIRGE
Ga0184627_102040612	3300018079	Groundwater Sediment	VANHATSDDDALRAALARQDDPDAHDRSLILERLAWTPEQRLQANALFLRFYLAARPAGPRVRDE
Ga0184627_103954431	3300018079	Groundwater Sediment	MSDGRELNTEPWREALRRQADVEAHDRSLIVERLAWTPEQRLEANAAFLRFYWGVRPEGPLIRE
Ga0184627_105005281	3300018079	Groundwater Sediment	MRETRPEVDLLREALESQQDDEAHDRSLIVERLAWTPEERLEANASFLRFYLAIRPEGPLIRDE
Ga0184639_104905362	3300018082	Groundwater Sediment	MSEPTRETGDRLREALERQEDGEAHDRGLIVERLAWTPEQRLEANAAFLRFYLTIRPEGPLIREE
Ga0184639_105815292	3300018082	Groundwater Sediment	VANHAASDDDALRAALARQHDSDAHDRSLILERLAWTPEQRLQANAVFLRFYLAARPAGPRVRDE
Ga0184639_106666512	3300018082	Groundwater Sediment	VALREALLQQGDGDAHDRSLILERLAWTPEQRLEANAAFLRFYLAARPDGPLIRGE
Ga0184629_101923282	3300018084	Groundwater Sediment	MAVKDVPAADAVRRALQRQREDPDEHDRSLIVERLAWTPEQRLAANAAFLRFYLALRPAGPLIRD
Ga0187893_101010192	3300019487	Microbial Mat On Rocks	VEPAKLDEAAIQAALRLQGNDETHDRSLIVERLGWTPEQRLAANASFLRFYLSVRPEGPLIRE
Ga0126371_108353023	3300021560	Tropical Forest Soil	LERALELQHEESAHDLSLIVERLSWSPEQRLDANAAFVRFYLSVRPEGPLIRE
Ga0126371_129657162	3300021560	Tropical Forest Soil	MSRKDSVLDPDLREALRQQRDADAHDRSLIVERLAWTPEQRLEANAAFLRFYLKIRPDGPLIRDK
(restricted) Ga0233425_100771382	3300024054	Freshwater	VDDEVLRDALMRQYEGEAHDRSLILERLAWTPEQRLAANAAFLRFYLTARPSGPLIRDD
Ga0209322_101216232	3300025146	Soil	MSEPSRVDQNALSDALQRQADGEEHDRSLIVERLAWTPEERLEANAAFLRFYLSIRPEGPLIEE
Ga0209324_103518902	3300025174	Soil	MCNILNRMSEPSRVDQNALSDALQRQADGEEHDRSLIVERLAWTPEERLEANAAFLRFYLSIRPEGPLIEE
Ga0209002_100373553	3300025289	Soil	MSEPSRVDHNVLYDALRRQADGEEHDGSLIVERLAWTPEERLEANAAFLRFYLSIRPEGPLIEE
Ga0209640_100486283	3300025324	Soil	MLEAKGHPEELKRALARQAEPEAHDRSLIVERLAWSPEERLEANASFLRFYLSVRPEGPLIEE
Ga0210120_10915952	3300025556	Natural And Restored Wetlands	ADEANALRDAIEIQHDPEAHDRGLIVERLAWTPEERLAANADFLRLYLSARPEGPLIREE
Ga0210120_11025712	3300025556	Natural And Restored Wetlands	VHEADEANALRDAIEIQHDPEAHDRGLIVERLAWTPEERLAANAEILRLYLSVRPSGPLIREE
Ga0256867_101041552	3300026535	Soil	MALFDPTLEADALRRALERQGEDESHDRGLIVERLGWTPEQRLAANAAFLRFYLKLRPQGPLTQE
Ga0256867_102207083	3300026535	Soil	MLEAKGHPEELKRALARQAEPEAHESSLIVERLAWSPEERLEANASFLRFYLSVRPDGPLIPE
Ga0209161_104256541	3300026548	Soil	MAIPGAVDEAAIREALRLQQADPDAHDRSLIVERLGWTPEERLEANAAFLRFYLSLRPDGPLIRD
Ga0209726_103510651	3300027815	Groundwater	VNHTSPDAAVLRDVLARQRDDDAHDRSLIVERLAWTPEQRLEANALFLRFYLAVRP
Ga0256864_10006055	3300027964	Soil	VPEPAEHDDTLKRVVARQAEEDAHDRGLIVERLAWTPEERLEANARFLRFYLSVRPEGPRVAE
Ga0256864_11641111	3300027964	Soil	STMPEPAELDEALRKALARQAEPDAHDRSLIVERLAWTPEERLEANARFLRFYLSVRPEGPRVAE
(restricted) Ga0255057_100699922	3300027997	Seawater	MAETNATNPQTDALLEAIRQQQGDDEAHDRSLIVERLQWTPEERLAANASFLRFYLSVRPQGPLIRD
(restricted) Ga0255057_103795572	3300027997	Seawater	MKENDLVSEVVREALRTQADGEAHDLGLIVERLGWTPEERLDANAAFLQLYFSVRPEGPLIRE
Ga0299907_102115791	3300030006	Soil	MLEAKGHPEELKRALARQAEPEAHDRSLIVERLAWSPEERLEANASFLRFYLSVR
Ga0299907_108627741	3300030006	Soil	MLEAKGHPEELKRALARQAEPEAHDRSLIVERLAWSPEERLEANASFLRFYLSVRPDGPL
Ga0299906_103508102	3300030606	Soil	MAEPTDRDAARLREAMERQKDDVFHDRSLIVERLAWTPEQRLEANAAFLRFYLSVRPEGPLIRE
Ga0268386_104119433	3300030619	Soil	MLEAKGHPEELKRALARQAEPEAHDRSLIVERLAWSPEERLEANASFLRFYLSVRPDGPLIPE
Ga0302046_100149833	3300030620	Soil	MPEPAELDEALRKALARQAEPDAHDRSLIVERLAWTPEERLEANARFLRFYLSVRPEGPRVAE
Ga0302046_100620283	3300030620	Soil	MPAALDCDANVDRPMPNPAAHDEALRKALARQAEPDAHDRSLIVERLAWTPEERLEANARFLRFYLSVRPEGPRVAE
Ga0214473_1000738613	3300031949	Soil	MYNILNRMSEPSRVDQNALSDALQRQADGEEHDRSLIVERLAWTPEERLEANAAFLRFYLSIRPEGPLIEE
Ga0214473_114753782	3300031949	Soil	VADRMDSEIDVQREVLRQMVDDEAHDRSLIVERLAWTPEERLEAHAAFLRLYWSIRPQGPLIGE
Ga0326597_100907375	3300031965	Soil	MDSEIDVQREVLRQMVDDEAHDRSLIVERLAWTPEERLEAHAAFLRLYWSIRPQGPLIGE
Ga0311301_109726961	3300032160	Peatlands Soil	MRGPSNPENDALAKALEEQADGEVHDRGLIVERLAWTPDQRLEANAAFVRLYLSIRPEGPLIRS
Ga0307472_1027290321	3300032205	Hardwood Forest Soil	EEQSDSLKKALDGQQDVETHDRSLIVERLAWTPEERLEANAAFIRFYLEIRPEGPMIREE
Ga0315273_100769622	3300032516	Sediment	MNDTVTPLEPEDRVRLEEALQRQHDGEEHDRGLIVERLGWSPDQRLEANAAFLRFYLSVRPEGPLVREE
Ga0214472_100350758	3300033407	Soil	VANQASADDALRTALARQYDPDAHDRSLILERLAWTPEQRLHANAVFLRFYLAARPAGPRVRDE
Ga0214472_105699792	3300033407	Soil	VNDSSAHDEVLRAALVRQDEDEAHDRSLILERLAWTPEQRLAANAAFLRFYLTASRCTG
Ga0326726_109224562	3300033433	Peat Soil	MAQEAQWNSDALREALKTQDDPEAHDRSLIVERLAWTPEQRLEANAAFLRFYFSVRPEGPLIREE
Ga0364930_0303096_4_201	3300033814	Sediment	VANHASRDADALRAALARQHDPDAHDRSLILERLAWTPEQRIRANAMFLRFYLGARPAGPLVRDE
Ga0364932_0267087_385_600	3300034177	Sediment	MCNILNRMSEPSRVDQNALSDALQRQADGEEHDRSLIVERLAWTPEERLEANAAFLRFYLSIRPEGPLIKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters