NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F093413

Metagenome Family F093413

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093413
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 47 residues
Representative Sequence MKFGYYTDDELPTSVALDRSPLKDYKVNSHGYRCPEWTPMPDGKK
Number of Associated Samples 88
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.14 %
% of genes near scaffold ends (potentially truncated) 93.40 %
% of genes from short scaffolds (< 2000 bps) 91.51 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (80.189 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(29.245 % of family members)
Environment Ontology (ENVO) Unclassified
(79.245 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(88.679 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 4.11%    β-sheet: 0.00%    Coil/Unstructured: 95.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF13186SPASM 3.77
PF06325PrmA 1.89
PF06676DUF1178 0.94
PF16363GDP_Man_Dehyd 0.94
PF03721UDPG_MGDP_dh_N 0.94
PF04055Radical_SAM 0.94
PF00326Peptidase_S9 0.94
PF01041DegT_DnrJ_EryC1 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG2264Ribosomal protein L11 methylase PrmATranslation, ribosomal structure and biogenesis [J] 1.89
COG2890Methylase of polypeptide chain release factorsTranslation, ribosomal structure and biogenesis [J] 1.89
COG3897Protein N-terminal and lysine N-methylase, NNT1/EFM7 familyPosttranslational modification, protein turnover, chaperones [O] 1.89
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.94
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.94
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.94
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.94
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.94
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.94
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.94
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.94
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.94
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.94
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.94
COG5319Uncharacterized conserved protein, DUF1178 domainFunction unknown [S] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A80.19 %
All OrganismsrootAll Organisms19.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2040502003|LanddsortDeep80_GCH9ZVC01DX074Not Available506Open in IMG/M
3300000115|DelMOSum2011_c10005372Not Available7476Open in IMG/M
3300001748|JGI11772J19994_1044833Not Available536Open in IMG/M
3300001967|GOS2242_1033662All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria890Open in IMG/M
3300006867|Ga0075476_10308799Not Available553Open in IMG/M
3300006925|Ga0098050_1008716All Organisms → Viruses → Predicted Viral3018Open in IMG/M
3300007538|Ga0099851_1035733All Organisms → Viruses → Predicted Viral1980Open in IMG/M
3300009001|Ga0102963_1049190Not Available1746Open in IMG/M
3300009172|Ga0114995_10069282Not Available1992Open in IMG/M
3300009193|Ga0115551_1333150Not Available659Open in IMG/M
3300009193|Ga0115551_1457266Not Available546Open in IMG/M
3300009422|Ga0114998_10623444Not Available508Open in IMG/M
3300009507|Ga0115572_10140842Not Available1420Open in IMG/M
3300009526|Ga0115004_10107750Not Available1706Open in IMG/M
3300009526|Ga0115004_10141059Not Available1460Open in IMG/M
3300009526|Ga0115004_10223258Not Available1125Open in IMG/M
3300009526|Ga0115004_10367202Not Available853Open in IMG/M
3300009705|Ga0115000_10157196All Organisms → Viruses → Predicted Viral1512Open in IMG/M
3300009785|Ga0115001_10316668Not Available987Open in IMG/M
3300009785|Ga0115001_10482049Not Available767Open in IMG/M
3300010296|Ga0129348_1052449Not Available1468Open in IMG/M
3300012920|Ga0160423_11116968Not Available527Open in IMG/M
3300012928|Ga0163110_11272582Not Available593Open in IMG/M
3300012928|Ga0163110_11279066Not Available591Open in IMG/M
3300012953|Ga0163179_10912913Not Available760Open in IMG/M
3300017697|Ga0180120_10375700Not Available560Open in IMG/M
3300017708|Ga0181369_1062928Not Available812Open in IMG/M
3300017709|Ga0181387_1128297Not Available523Open in IMG/M
3300017709|Ga0181387_1135635Not Available508Open in IMG/M
3300017713|Ga0181391_1112667Not Available612Open in IMG/M
3300017713|Ga0181391_1131104Not Available559Open in IMG/M
3300017714|Ga0181412_1075704All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium815Open in IMG/M
3300017725|Ga0181398_1110179Not Available656Open in IMG/M
3300017726|Ga0181381_1014503Not Available1824Open in IMG/M
3300017726|Ga0181381_1130871Not Available523Open in IMG/M
3300017727|Ga0181401_1068109Not Available944Open in IMG/M
3300017739|Ga0181433_1024771All Organisms → Viruses → Predicted Viral1580Open in IMG/M
3300017741|Ga0181421_1033058All Organisms → Viruses → Predicted Viral1396Open in IMG/M
3300017741|Ga0181421_1093484Not Available784Open in IMG/M
3300017743|Ga0181402_1178038Not Available532Open in IMG/M
3300017744|Ga0181397_1086396Not Available833Open in IMG/M
3300017745|Ga0181427_1004221Not Available3606Open in IMG/M
3300017745|Ga0181427_1109932Not Available673Open in IMG/M
3300017748|Ga0181393_1147504Not Available587Open in IMG/M
3300017751|Ga0187219_1127402All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium750Open in IMG/M
3300017753|Ga0181407_1084036Not Available810Open in IMG/M
3300017753|Ga0181407_1149402Not Available577Open in IMG/M
3300017755|Ga0181411_1215001Not Available536Open in IMG/M
3300017756|Ga0181382_1031121All Organisms → Viruses → Predicted Viral1615Open in IMG/M
3300017758|Ga0181409_1226348Not Available534Open in IMG/M
3300017759|Ga0181414_1145030Not Available621Open in IMG/M
3300017760|Ga0181408_1059523Not Available1014Open in IMG/M
3300017760|Ga0181408_1077975All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium869Open in IMG/M
3300017762|Ga0181422_1223175Not Available563Open in IMG/M
3300017765|Ga0181413_1210963Not Available578Open in IMG/M
3300017767|Ga0181406_1142898Not Available718Open in IMG/M
3300017950|Ga0181607_10125888All Organisms → Viruses → Predicted Viral1584Open in IMG/M
3300017958|Ga0181582_10166809All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1524Open in IMG/M
3300018410|Ga0181561_10019464Not Available5012Open in IMG/M
3300018413|Ga0181560_10427690All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella606Open in IMG/M
3300018420|Ga0181563_10097402Not Available1932Open in IMG/M
3300018423|Ga0181593_10885017Not Available619Open in IMG/M
3300018426|Ga0181566_10617579Not Available751Open in IMG/M
3300020360|Ga0211712_10043478Not Available1121Open in IMG/M
3300020394|Ga0211497_10385924Not Available511Open in IMG/M
3300020430|Ga0211622_10316155Not Available669Open in IMG/M
3300020441|Ga0211695_10352028Not Available550Open in IMG/M
3300020451|Ga0211473_10478467Not Available635Open in IMG/M
3300020455|Ga0211664_10345741Not Available687Open in IMG/M
3300020463|Ga0211676_10570082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae586Open in IMG/M
3300020601|Ga0181557_1272176Not Available574Open in IMG/M
3300021375|Ga0213869_10347507Not Available620Open in IMG/M
3300021791|Ga0226832_10320219All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium637Open in IMG/M
3300021959|Ga0222716_10467013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria717Open in IMG/M
3300022923|Ga0255783_10346978Not Available580Open in IMG/M
3300022925|Ga0255773_10397539Not Available524Open in IMG/M
3300023175|Ga0255777_10356039Not Available806Open in IMG/M
3300023175|Ga0255777_10624711Not Available530Open in IMG/M
3300023245|Ga0222655_1023082All Organisms → Viruses → Predicted Viral1090Open in IMG/M
3300025151|Ga0209645_1069558All Organisms → Viruses → Predicted Viral1190Open in IMG/M
3300025610|Ga0208149_1158716Not Available512Open in IMG/M
3300025655|Ga0208795_1093237Not Available817Open in IMG/M
3300025674|Ga0208162_1095564Not Available893Open in IMG/M
3300025680|Ga0209306_1177339Not Available592Open in IMG/M
3300025849|Ga0209603_1084477Not Available1478Open in IMG/M
3300025869|Ga0209308_10428191All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium522Open in IMG/M
3300026073|Ga0207961_1064204All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium802Open in IMG/M
3300026270|Ga0207993_1184838Not Available531Open in IMG/M
3300027687|Ga0209710_1149481Not Available850Open in IMG/M
3300027687|Ga0209710_1171692Not Available766Open in IMG/M
3300027801|Ga0209091_10353052Not Available679Open in IMG/M
3300027813|Ga0209090_10302689Not Available793Open in IMG/M
3300029319|Ga0183748_1127685Not Available538Open in IMG/M
3300031622|Ga0302126_10198046Not Available718Open in IMG/M
3300031626|Ga0302121_10146136Not Available679Open in IMG/M
3300031626|Ga0302121_10201594Not Available564Open in IMG/M
3300031638|Ga0302125_10032144Not Available1837Open in IMG/M
3300031700|Ga0302130_1083221Not Available1029Open in IMG/M
3300031700|Ga0302130_1250103Not Available533Open in IMG/M
3300031886|Ga0315318_10743768Not Available549Open in IMG/M
3300032006|Ga0310344_10791552All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium804Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater29.25%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine23.58%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh11.32%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine9.43%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.66%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous4.72%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater2.83%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.89%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.94%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.94%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.94%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.94%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.94%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.94%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.94%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.94%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.94%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.94%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.94%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
204050200380 m water depthEnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300001967Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018423Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020360Marine microbial communities from Tara Oceans - TARA_B100000459 (ERX555918-ERR599165)EnvironmentalOpen in IMG/M
3300020394Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020441Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020455Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300020473Marine microbial communities from Tara Oceans - TARA_B100000700 (ERX555932-ERR598948)EnvironmentalOpen in IMG/M
3300020601Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022923Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaGEnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300023245Saline water microbial communities from Ace Lake, Antarctica - #423EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025680Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300026073Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B (SPAdes)EnvironmentalOpen in IMG/M
3300026270Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031622Marine microbial communities from Western Arctic Ocean, Canada - CB4_20mEnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031638Marine microbial communities from Western Arctic Ocean, Canada - CB4_surfaceEnvironmentalOpen in IMG/M
3300031700Marine microbial communities from Western Arctic Ocean, Canada - CB9_surfaceEnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
80m_3291202040502003MarineMKHGYYADRELPESIGINKPPLVDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSHTFGQGNTGQRTLGTSSITTQHN
DelMOSum2011_1000537213300000115MarineMKQGYYTDDDIPKSTALDSKTIVDYKINSYGYRCPEFRPLPPGKKNVVILGDSH
JGI11772J19994_104483333300001748Saline Water And SedimentMKFGFYADGQLPDSDANGHEFFKDYKLNSHGYRCPEWEPMPD
GOS2242_103366263300001967MarineMKHGYYTDRELPESVGINRKTLIDYKTNSHGYRCPEWEPMPDGK
Ga0075476_1030879913300006867AqueousMKFGYYSDSAMPEAVIPGGVDLQDYKLNAHGYRCPEWTPMPDGKKNV
Ga0098050_1008716153300006925MarineMKFGFYSDGELPKSVALDRPPLKDYKVNSHGYRCPEWTPMPEGKK
Ga0099851_103573313300007538AqueousMKFGFYSDREIPESVTIDGSLWKDYKLNSHGYRCPEWEPMPDGKKNVVVLGCS
Ga0102963_104919013300009001Pond WaterMKFGYYADNELPASVALTFSNLSDYKVNKYGYRCPE
Ga0114995_1006928213300009172MarineMKYGYYADRELPESVDINKPPLMDYKTNSHGYRCPEWEPMPD
Ga0115551_133315013300009193Pelagic MarineMKFGYYADREMPVSVALDREPLKGYKVNSHGYRCPKWEPMPDGKKNV
Ga0115551_145726613300009193Pelagic MarineMKYGYYADDEIPESIPLDKKSIVSYKTNSHGYRCPEWTPLPEGKKNVVVLG
Ga0114998_1062344423300009422MarineMKYGFYSDRELPESVGINKPPQIDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSHTFGQGN
Ga0115572_1014084213300009507Pelagic MarineMKHGYYSDSTIPEAVIPTGVDMKDYKLNAHGYRCPEWTPMPDGKKNVV
Ga0115004_1010775033300009526MarineMKFGYYTDRELPVSVALDKFKDYKVNSHGYRCPEWDPMPDGKK
Ga0115004_1014105933300009526MarineMKFGYYTDRELPVSVALDRSSLKDYKVNSHGYRCPEWDPMP
Ga0115004_1022325813300009526MarineMKYGYYADRELPESVGINKPPLMDYKTNSHGYRCPEWEPMPDGKKNV
Ga0115004_1036720233300009526MarineMKFGHYADRELPESVGINKPPLMDYKTNSHGYRCPEWEPMPDG
Ga0115000_1015719633300009705MarineMKHGHYADRELPESVGIDKSPLIDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSH
Ga0115001_1031666813300009785MarineMKFGHYADRELPESVGINKPPLMDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSHTF
Ga0115001_1048204913300009785MarineMKYGYYADRELPESVDINKPPLMDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSHTF
Ga0129348_105244923300010296Freshwater To Marine Saline GradientMKYGYYADKEIPKSVALDHKSIVDYKTNSHGYRCPEWTPLPEGKKNVVILGC
Ga0160422_1084784113300012919SeawaterMKYGFYSDSELPKSVAVDKKPIADYKTNSQGYRCPEFSPLPVGKKNAVVIGC
Ga0160423_1111696833300012920Surface SeawaterMKHGYYTDRELPESVGINRKPPIDYKTNSHGYRCP
Ga0163110_1127258243300012928Surface SeawaterMKFGYYADNEIPKSVALGRSPLTDYKVNSYGYRCPEWAPMPD
Ga0163110_1127906623300012928Surface SeawaterMKHGYYSDRELPKSVGINRKPLIDYKVNSHGYRCPEWDPMPDG
Ga0163179_1091291323300012953SeawaterMKHGYYTDRELPQSVGINKKPLIDYKTNSHGYRCPEWEPMP
Ga0180120_1037570013300017697Freshwater To Marine Saline GradientMKFGYYTDQGLPESVALDRSPLKDYKVNSHGYRCPEWTTMPSGKKNAVVLGCSHTF
Ga0181369_106292833300017708MarineMKYGYYADDRLPVSVAVDRSPIKDYKVNSHGYRCPEWKPMPDGKKNVV
Ga0181387_112829733300017709SeawaterMMKFGHYTDQEIPVSVASDRSPIKDYKVNSHGYRCPEWTP
Ga0181387_113563523300017709SeawaterMKYGYYTDNELPKSVALESSPLKDYKLNSHGYRCQEWTPLPDGK
Ga0181391_111266733300017713SeawaterMKFGYYADRELPVSVALDRSPLKDYKVNTHGYRCPEWDPMPDGKKNVVVLG
Ga0181391_113110423300017713SeawaterMKFGYYTDRELPVSVALDRSPLKDYKVNSHGYRCPEWDPMPSGKKNVVVLGCSH
Ga0181412_107570443300017714SeawaterMKFGNYTDRELPVSLPLDKSLLENYKVNKHGYRCPAWDPMPSGKK
Ga0181398_111017943300017725SeawaterMKFGYYTDRELPVSVALDRSPLKDYKVNSYGYRCPEWTPMPDGKKNVVVLGCSH
Ga0181381_101450313300017726SeawaterMKYGYYTDRELPVSVAMDRPPLKDYKVNSSGYRCP
Ga0181381_113087133300017726SeawaterMKFGYYTDQGLPESVALDRSPLKDYKVNCHGYRCPEWTTMPSGKKNVV
Ga0181401_106810913300017727SeawaterMKHGYYADRELPKSVGINKAPIIDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSHTFGQGNTDN
Ga0181416_116580213300017731SeawaterMKYGYYSDNKLPKSVAVDRKPIADYKTNTDGYRTREFSPLPVGKKNAVVIGCSHTFGEGLEDNEHWVH
Ga0181433_102477173300017739SeawaterMKFGNYTDRELPVSLPLDKSLLENYKVNKHGYRCPAWDPM
Ga0181421_103305843300017741SeawaterMKYGYYTDNELPKSVALESSPLKDYKLNSHGYRCQEWTPLPDGKK
Ga0181421_109348413300017741SeawaterMKYGYYADDRLPVSVAVDRSPIKDYKVNSHGYRCPEWKPM
Ga0181402_117803813300017743SeawaterMKFGHYTDQEIPVSVASDRSPIKDYKVNSHGYRCPEWTPMPDGKKNVVVL
Ga0181397_108639613300017744SeawaterMKHGYYADRELPKSVGINKAPIIDYKTNSHGYRCPEWEPMPDGKKNVVVLG
Ga0181427_100422153300017745SeawaterMMKFGYYTDQEIPVSAGLNRSPIKDYQVNSHGYRCPEWTPMPDGKKMLWC
Ga0181427_1010075103300017745SeawaterMKYGYYSDNKLPKSVAVDRKPIADYKTNTDGYRTREFSPLPVGKKNA
Ga0181427_110993213300017745SeawaterMKHGFYSDQEIPESIAKDKKTIVDYKTNSHGYRCPEWTPLPVGF
Ga0181393_114750433300017748SeawaterMKFGYYTDRELPVSVALDRSPLKDYKVNSHGYRCPEWTPMPSGKKNVVVLGCSHTFGQGN
Ga0187219_112740253300017751SeawaterMMKFGHYADHEIPVSVASDRSPIKDYKVNSHGYRCPEW
Ga0181407_108403613300017753SeawaterMKYGYYADDRLPVSVAVDRSPIKDYKVNSHGYRCPEWKPMPDGKKN
Ga0181407_114940213300017753SeawaterMKFGYYTDRELPVSVALDRSPLKDYKVNSYGYRCPEWTPMPDGKKNVVVLGCSHTFGQ
Ga0181411_121500133300017755SeawaterMKYGYYADNELPVSVAVDRSPIKDYKVNSHGYRCPEWKPMPDGKN
Ga0181382_103112163300017756SeawaterMMKFGYYTDQEIPVSAGLNRSPIKDYQVNSHGYRCPEWTPM
Ga0181409_122634813300017758SeawaterMKFGFYTDRELPEGVGLDLPPYNDYKLNSHGYRCPEWDPMPEG
Ga0181414_114503043300017759SeawaterMKFGYYTDRELPVSVALDRSPLKDYKVNSHGYRCPE
Ga0181408_105952313300017760SeawaterMKYGYYADDRLPVSVAVDRSPIKDYKVNSHGYRCPEWKPMPDGKKNVVVL
Ga0181408_107797513300017760SeawaterMKFGNYTDRELPVSLPLDKSLLENYKVNKHGYRCPA
Ga0181422_122317513300017762SeawaterMKFGYYTDRELPVSVALDRSPLKDYKVNSYGYRCPEWTPMPDGKKNVVVLGCSHT
Ga0181413_121096333300017765SeawaterMMKFGHYTDQEIPVSVASDRSPIKDYKVNSHGYRCPEWTPMPDGKKNVVVLGCSHTFG
Ga0181406_114289813300017767SeawaterMMKFGHYADHEIPVSVASDRSPIKDYKVNSHGYRCPEWTPMPDGKKNV
Ga0181607_1012588813300017950Salt MarshMKFGYYTDDELPTSVALDRSPLKDYKVNSHGYRCPEWTPMPDGKK
Ga0181582_1016680973300017958Salt MarshMKFGFYSDREIPNGTELDGYRLNSRGYRCPEWTPMPDGKK
Ga0181561_1001946413300018410Salt MarshMNMKFGYYSDSNIPKSTALSSKLKKDYKINSYGYRCPEWKPLPVGKKNVVVLG
Ga0181560_1042769043300018413Salt MarshMKFGYYTDRELPVSVALDRSPLKDYKVNSYGYRCPEWTPMPSGKK
Ga0181563_1009740243300018420Salt MarshMKFGYYADNELPVSVALDRSPLKDYKVNSYGYRCPE
Ga0181593_1088501743300018423Salt MarshMKFGFYADGQLPDSDANGHEFFKDYKLNSHGYRCPEWEPMPDGKKNVVVLGC
Ga0181566_1061757963300018426Salt MarshVKFGYYADRELPVSVALDRSPLKDYKVNSHGYRCPEWNPMPEGKK
Ga0211712_1004347813300020360MarineMKFGYYADNEIPKSVALGRSPLTDYKVNSYGYRCPEWAPMP
Ga0211497_1038592413300020394MarineMKFGYYADNEIPKSVALGRSPLTDYKVNSYGYRCPE
Ga0211622_1031615543300020430MarineMKFGYYSDKAMPVSVALDRSPLKDYRVNSHGYRCPEWHPMPDGKKNVVVLGCSHTFGQGNADN
Ga0211695_1035202823300020441MarineMKHGYYSDRELPKSVGINKPPIIDYKTNSHGYRCPEWEPMPDGKKNV
Ga0211473_1047846723300020451MarineMKFGYYSDKEIPESIAKDKKPISDYKTNSHGYRCPEWSPLPVGK
Ga0211664_1034574113300020455MarineMKFGYYTDDELPTSVALDRPPLKDYKVNSHGYRCPEWTPMPDGKKNVAVLGCS
Ga0211676_1057008223300020463MarineMKFGYYSDKEIPESIAKDKKPISDYKTNSHGYRCPEWSPLPVGKKNVV
Ga0211625_1038809913300020473MarineMKYGFYSDSELPKSVAVNKKPIADYKTNSQGYRCPEFSPLPVGKKNAVVIGCSHT
Ga0181557_127217633300020601Salt MarshMKYGYYADDRLPVSVAVDRSPIKDYKVNSHGYRCP
Ga0213869_1034750743300021375SeawaterMKFGYYTDRELPVSVALDRSPLKDYKVNSYGYRCPEWTPMPSGKKNVV
Ga0226832_1032021933300021791Hydrothermal Vent FluidsMEYGYYNDKKLPKSVAIDRKPIADYKTNSHGYRCPEFSPLPQGKKNVVVLGCSHTFGEG
Ga0222716_1046701313300021959Estuarine WaterMKYGFYADNELPTSVALDRTPLTDYKVNSHGYRCPEWT
Ga0255783_1034697833300022923Salt MarshMKFGYYGDRELPVSVALDKSPLKDYKVNSHGYRCPEWEPMPSGKKNVVVLGCSHTF
Ga0255773_1039753913300022925Salt MarshMKFGYYTDRELPVSVALDRSPLKDYKVNSYGYRCPEWT
Ga0255777_1035603913300023175Salt MarshMKFGYYTDRELPVSVALDRAPLKDYKVNSYGYRCPEWTPM
Ga0255777_1062471123300023175Salt MarshMKFGYYADRELPVSVALDKAPLKDYKVNSHGYRCPEWEPMPDGK
Ga0222655_102308223300023245Saline WaterMKFGYYADRELPESVGIDKPLLIDYKTNSHGYRCPEWDPMPDGKKNVVVLGCSHTYGVGLEDD
Ga0209645_106955843300025151MarineMKFGYYSDSGLPEGVTNKDYAVNSHGYRCPEWTPMPDGKKNVVVLG
Ga0208149_115871613300025610AqueousMKFGYYTDRELPVSVALDRSQWKDYKVNSHGYRCPEWDPMPDGKKNVIVLG
Ga0208795_109323753300025655AqueousMKFGFYSDREIPESVTIDGSLWKDYKLNSHGYRCPEWEPMPDGKKNVVV
Ga0208162_109556413300025674AqueousMKFGYYADREIPESVASDRSLWKDYKLNSHGYRCPEWTPMPDGKKN
Ga0209306_117733913300025680Pelagic MarineMKFGYYTDRELPVSVALDRAPLKDYKVNSYGYRCPEWTP
Ga0209603_108447743300025849Pelagic MarineMKHGYYSDSTIPEAVIPTGVDMKDYKLNAHGYRCPEWTPMPDGKKN
Ga0209308_1042819123300025869Pelagic MarineMKFGYYSDKDIPKSIALDRKPIKDYKVNSYGYRTPEWKPLPDGKKNVVIL
Ga0207961_106420433300026073MarineMEYGYYNDKGIPESIAKDKKPIADYKTNSHGYRCPEFSPLPAGKKNVVVLGCSHTFG
Ga0207993_118483833300026270MarineMKHGYYTDRELPESVGINRKPLIDYKTNSHGYRCPEWEPMPDGKKN
Ga0209710_114948123300027687MarineMKYGYYADRELPESVGINKPPLMDYKTNSHGYRCPEW
Ga0209710_117169213300027687MarineMKFGHYADRELPESVGINKPPLMDYKTNSHGYRCPEW
Ga0209091_1035305213300027801MarineMKHGHYADRELPESVGIDKSPLIDYKTNSHGYRCPEWE
Ga0209090_1030268923300027813MarineMKFGHYADRELPESVGINKPPLMDYKTNSHGYRCPEWEPMPDGKKN
Ga0183748_112768533300029319MarineMKYGYYNDRGLPESVAKNHSPIKDYKVNSHGYRCPEWEPMPDGKKN
Ga0183755_109862423300029448MarineMKYGFYSDKELPKSVAVNKKPIADYKTNSQGYRCPEFAPLPVGKKNAVVIG
Ga0302126_1019804613300031622MarineMKYGYYADRELPESVGINKPPLMDYKTNSHGYRCPEWEPMPD
Ga0302121_1014613623300031626MarineMKHGYYADRELPESIGINKPPLVDYKTNSHGYRCPEWEPMPDGKKNVVVLGC
Ga0302121_1020159413300031626MarineMKYGFYSDRELPESVGINKPPQIDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSHTFGQG
Ga0302125_1003214413300031638MarineMKYGYYADRELPESVGINKPPLMDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSHTF
Ga0302130_108322133300031700MarineMKFGHYADRELPESVGINKPPLMDYKTNSHGYRCPEWEPMPDGKKNVVVLGCSH
Ga0302130_125010313300031700MarineMKFGYYTDRELPVSVALDRASLKDYKVNSHGYRCPEWDPMPSGKKNVVVLGCSHTFGQGN
Ga0315318_1074376813300031886SeawaterMKFGYYNDKELPKSVALDRKPIKDYKTNSHGYRCPEFSPLPDGKKNVVV
Ga0310344_1079155213300032006SeawaterMEYGYYNDKGIPESIAKDKKPIADYKTNSHGYRCPEFSPLPAGKKNV


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