Metagenome Family F092651

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092651
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	39 residues
Representative Sequence	METQRPGRMSAPGITEPTEAIARARAGDAEAWGELYRDYAPAI
Number of Associated Samples	90
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.93 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	84.11 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.178 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.645 % of family members)
Environment Ontology (ENVO)	Unclassified (37.383 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.794 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.76% β-sheet: 0.00% Coil/Unstructured: 73.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13620	CarboxypepD_reg	12.15
PF01926	MMR_HSR1	5.61
PF11937	DUF3455	5.61
PF01451	LMWPc	4.67
PF02566	OsmC	1.87
PF02518	HATPase_c	1.87
PF12840	HTH_20	0.93
PF01850	PIN	0.93
PF13411	MerR_1	0.93
PF00005	ABC_tran	0.93
PF14509	GH97_C	0.93
PF05163	DinB	0.93
PF11154	DUF2934	0.93
PF07715	Plug	0.93
PF02401	LYTB	0.93
PF13847	Methyltransf_31	0.93
PF03544	TonB_C	0.93
PF14714	KH_dom-like	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	1.87
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.87
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.87
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.18 %
Unclassified	root	N/A	16.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.18 %
Unclassified	root	N/A	16.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.18 %
Unclassified	root	N/A	16.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	56.07 %
Unclassified	root	N/A	16.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.35 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.67 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.67 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.93 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.93 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	0.93 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101683624	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300002560\|JGI25383J37093_10144004	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300003220\|JGI26342J46808_1004296	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300004152\|Ga0062386_100023596	All Organisms → cellular organisms → Bacteria → Acidobacteria	4517	Open in IMG/M
3300005178\|Ga0066688_10414882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300005180\|Ga0066685_10050263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2674	Open in IMG/M
3300005552\|Ga0066701_10978176	Not Available	500	Open in IMG/M
3300005568\|Ga0066703_10710033	Not Available	578	Open in IMG/M
3300006102\|Ga0075015_101008950	Not Available	510	Open in IMG/M
3300006172\|Ga0075018_10450573	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300006176\|Ga0070765_100008397	All Organisms → cellular organisms → Bacteria	7057	Open in IMG/M
3300006796\|Ga0066665_10529483	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300006806\|Ga0079220_11015618	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300009088\|Ga0099830_10002298	All Organisms → cellular organisms → Bacteria	10057	Open in IMG/M
3300009088\|Ga0099830_10027313	All Organisms → cellular organisms → Bacteria	3810	Open in IMG/M
3300009088\|Ga0099830_10926243	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300009089\|Ga0099828_10013565	All Organisms → cellular organisms → Bacteria	6161	Open in IMG/M
3300009089\|Ga0099828_10487550	Not Available	1111	Open in IMG/M
3300009089\|Ga0099828_10941145	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300010046\|Ga0126384_12097073	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300010321\|Ga0134067_10090852	Not Available	1034	Open in IMG/M
3300010343\|Ga0074044_10037750	Not Available	3366	Open in IMG/M
3300010358\|Ga0126370_10690063	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300010376\|Ga0126381_102179505	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300011269\|Ga0137392_10484705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300011269\|Ga0137392_10491066	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300011269\|Ga0137392_10594665	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300011270\|Ga0137391_10352178	Not Available	1264	Open in IMG/M
3300011270\|Ga0137391_10724154	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300011271\|Ga0137393_10211820	All Organisms → cellular organisms → Bacteria → Acidobacteria	1638	Open in IMG/M
3300011271\|Ga0137393_11290847	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300012189\|Ga0137388_11924832	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300012189\|Ga0137388_11935383	Not Available	519	Open in IMG/M
3300012203\|Ga0137399_10657185	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300012207\|Ga0137381_10750717	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012207\|Ga0137381_11627839	Not Available	536	Open in IMG/M
3300012208\|Ga0137376_10539057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300012209\|Ga0137379_11632497	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300012349\|Ga0137387_10755103	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300012582\|Ga0137358_10028860	All Organisms → cellular organisms → Bacteria → Acidobacteria	3628	Open in IMG/M
3300012685\|Ga0137397_10501166	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300012918\|Ga0137396_10446565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300012918\|Ga0137396_10938866	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300012918\|Ga0137396_11174267	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300012923\|Ga0137359_10603914	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300012923\|Ga0137359_11515431	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300012925\|Ga0137419_10111621	All Organisms → cellular organisms → Bacteria → Acidobacteria	1913	Open in IMG/M
3300012925\|Ga0137419_11912589	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012929\|Ga0137404_11709304	Not Available	584	Open in IMG/M
3300012930\|Ga0137407_11334866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300012931\|Ga0153915_12605975	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300014153\|Ga0181527_1022428	All Organisms → cellular organisms → Bacteria → Acidobacteria	4003	Open in IMG/M
3300014164\|Ga0181532_10181700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300015167\|Ga0167661_1060027	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300015241\|Ga0137418_11021065	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300016294\|Ga0182041_10523539	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300016341\|Ga0182035_10096345	Not Available	2156	Open in IMG/M
3300017959\|Ga0187779_11038780	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300017966\|Ga0187776_10726982	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300017972\|Ga0187781_11015546	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300018026\|Ga0187857_10514527	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300018086\|Ga0187769_10271596	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300018086\|Ga0187769_10994514	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300018090\|Ga0187770_11104351	Not Available	640	Open in IMG/M
3300018090\|Ga0187770_11230235	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300020018\|Ga0193721_1165604	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300020199\|Ga0179592_10016973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3202	Open in IMG/M
3300020583\|Ga0210401_10370853	All Organisms → cellular organisms → Bacteria → Acidobacteria	1293	Open in IMG/M
3300021168\|Ga0210406_10464601	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300021401\|Ga0210393_10491116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	1003	Open in IMG/M
3300021420\|Ga0210394_11755776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300021560\|Ga0126371_13265383	Not Available	548	Open in IMG/M
3300024219\|Ga0247665_1044599	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300024286\|Ga0247687_1037890	Not Available	711	Open in IMG/M
3300026294\|Ga0209839_10066042	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	1278	Open in IMG/M
3300026295\|Ga0209234_1154603	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300026317\|Ga0209154_1262457	Not Available	587	Open in IMG/M
3300026322\|Ga0209687_1213965	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300026371\|Ga0257179_1050867	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300026538\|Ga0209056_10429133	Not Available	780	Open in IMG/M
3300026760\|Ga0207630_105374	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300027565\|Ga0209219_1106431	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300027629\|Ga0209422_1002578	All Organisms → cellular organisms → Bacteria	4376	Open in IMG/M
3300027671\|Ga0209588_1048970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1367	Open in IMG/M
3300027671\|Ga0209588_1059870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1232	Open in IMG/M
3300027681\|Ga0208991_1236659	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300027737\|Ga0209038_10059314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300027783\|Ga0209448_10040345	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300027812\|Ga0209656_10017345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4443	Open in IMG/M
3300027898\|Ga0209067_10349597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	820	Open in IMG/M
3300028138\|Ga0247684_1038078	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300030057\|Ga0302176_10470323	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300031469\|Ga0170819_16616348	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300031546\|Ga0318538_10832879	Not Available	501	Open in IMG/M
3300031744\|Ga0306918_10942928	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031753\|Ga0307477_11068361	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300031771\|Ga0318546_10969480	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031946\|Ga0310910_11210855	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300031954\|Ga0306926_12898852	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031962\|Ga0307479_10042572	All Organisms → cellular organisms → Bacteria	4358	Open in IMG/M
3300032064\|Ga0318510_10532085	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300032076\|Ga0306924_10772417	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300032091\|Ga0318577_10026049	All Organisms → cellular organisms → Bacteria → Acidobacteria	2486	Open in IMG/M
3300032782\|Ga0335082_10190017	Not Available	1958	Open in IMG/M
3300032828\|Ga0335080_10574758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1188	Open in IMG/M
3300032897\|Ga0335071_10021130	All Organisms → cellular organisms → Bacteria → Acidobacteria	6534	Open in IMG/M
3300033158\|Ga0335077_10175414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2433	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.78%
Aquatic	Environmental → Aquatic	11.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.85%
Freshwater	Environmental → Aquatic → Freshwater	8.41%
Sediment	Environmental → Aquatic → Sediment	2.80%
Peat	Environmental → Terrestrial → Peat	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.41%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026760	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-B (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1016836241	3300002245	Forest Soil	MDAPRPDRMSAPGITEPTEAIARARAGDGDAWGELYREYAPAMFR
JGI25383J37093_101440041	3300002560	Grasslands Soil	MVDARRPDRAGALEKPEPTETIARAKAGNADAWGELYRSYAPAIFR
JGI26342J46808_10042961	3300003220	Bog Forest Soil	MSVPGMTETTEAVARARAGDNDAWGQLYRDFAPAIFRFCR
Ga0062386_1000235963	3300004152	Bog Forest Soil	MSAPGKTESTDLVVRARTGDAEAWGDLYREFAPAIFRFCR
Ga0066688_104148821	3300005178	Soil	MGTLRPGRMSVPGITEPTEAIARARAGDAEAWGELYRDYA
Ga0066685_100502634	3300005180	Soil	METLRPGRMSAPGIKEPTEAIARARAGDAEAWGELYRDYAPA
Ga0066701_109781761	3300005552	Soil	MEAPRPGRMSAPGTVDASQAIARARAGDQEAWGDLY
Ga0066703_107100331	3300005568	Soil	MEPLRPGRMSAPGITEPTEAITRAKAGDAEAWGQL
Ga0075015_1010089501	3300006102	Watersheds	MDAPRPERMSAPGKTEPTEAIARARTGDADAWGVLYREYAS
Ga0075018_104505731	3300006172	Watersheds	MSAPGTMEPTEVIARARAGDASAWGQLYHDYAPAIFRFCR
Ga0070765_1000083973	3300006176	Soil	MEPLRPGPKSVPGMTETTEAVARARAGDADAWGELYRDFAPAIF
Ga0066665_105294831	3300006796	Soil	METLRPGRMSAPGTTEPTDVITRARAGEADAWGELYREYAPAIFR
Ga0079220_110156182	3300006806	Agricultural Soil	MSVPGMTETTEAVARARAGDAEAWGELYRQYAPAIF
Ga0099830_100022981	3300009088	Vadose Zone Soil	MELLRPGRMSAPGITEPTEAITRAKAGDAEAWGQLYHDYAPAI
Ga0099830_100273131	3300009088	Vadose Zone Soil	MNAPGITEPTEAIARARAGDAEAWGELYREYAPAIF
Ga0099830_109262431	3300009088	Vadose Zone Soil	MEPLRPGRMSAPGITEPTEAITRAKAGDAEAWGQLYHDYA
Ga0099828_100135651	3300009089	Vadose Zone Soil	METLRPGRMSTPGIKEPTEAIARARAGDAEAWGELYRDCA
Ga0099828_104875501	3300009089	Vadose Zone Soil	METLRPGRMSAPGITQPTEAITRARAGDAEAWGELYREYAPP
Ga0099828_109411451	3300009089	Vadose Zone Soil	METLRPGRMSAPGIKEPTEAIARARAGDAEAWGELYRDCAP
Ga0126384_120970732	3300010046	Tropical Forest Soil	MSAPGKTEPTEAIARARAGDADAWGELYREYAPAMF
Ga0134067_100908521	3300010321	Grasslands Soil	METLRPGRMSAPGIKEPTEAIARARAGDAEAWGELYRDYAPAMFRF
Ga0074044_100377501	3300010343	Bog Forest Soil	MEPLKPGLISVPGKTEPMDLIAQARAGDTQARRALYREYT
Ga0126370_106900631	3300010358	Tropical Forest Soil	MSAPGITEPTEAIARARAGDADAWGELYREYAPAIFRF
Ga0126381_1021795052	3300010376	Tropical Forest Soil	MEPLRPGRMSAPGKTEPTDLIARARAGDTQAWGDLYR
Ga0137392_104847051	3300011269	Vadose Zone Soil	METPRSGRMNAPGIKEPTEAIARARAGDAEAWGEL
Ga0137392_104910661	3300011269	Vadose Zone Soil	METLRPGRMNAPGTTEATEAITRARAGDAEAWGELYR
Ga0137392_105946651	3300011269	Vadose Zone Soil	METLKPGRMSAPGITQPTEAITRARAGDAEAWGELYREYA
Ga0137391_103521781	3300011270	Vadose Zone Soil	METLRPGRMSTPGIKEPTEAIARARAGDAEAWGELYRDCAPA
Ga0137391_107241543	3300011270	Vadose Zone Soil	MSVPGITKPTEALGRARAGDAEAWGELYRQYAPAIFR
Ga0137393_102118201	3300011271	Vadose Zone Soil	MEPLRPGRMSAPGITEPTEAITRAKAGDAEAWGQLYHDYAPAI
Ga0137393_112908471	3300011271	Vadose Zone Soil	METLRPGRMNAPGTTEPSEAITRARAGDAEAWGELYR
Ga0137388_119248321	3300012189	Vadose Zone Soil	MSAPGISEPTEAITRAKAGDAEAWGQLYHDYAPAIFRF
Ga0137388_119353832	3300012189	Vadose Zone Soil	MGTLRPGRMSAPGITEPTEAITRARAGDAEAWGEL
Ga0137399_106571852	3300012203	Vadose Zone Soil	MNAPGITEPTEAIARARAGDAEAWGELYRDYAPAIFR
Ga0137381_107507171	3300012207	Vadose Zone Soil	METLRPGRMSAPGIKESTEAIARARAGAAEAWGELYREYAAAIFRF
Ga0137381_116278391	3300012207	Vadose Zone Soil	MVDARRPDRAGALEKPEPAETIARAKAGNADAWGELYRSYAPAI
Ga0137376_105390571	3300012208	Vadose Zone Soil	MGTLRPGRMSTPGITKPPDAIARARAGAAEAWGQLSRDYAPAIF
Ga0137379_116324972	3300012209	Vadose Zone Soil	MSAPGISEPTEAIARARAGDAEAWGQLYREYAPAIF
Ga0137387_107551031	3300012349	Vadose Zone Soil	MSAPAKIEPVETIARARTGDADAWGQLYKEYAPAIF
Ga0137358_100288602	3300012582	Vadose Zone Soil	MSAPGKTESREAITRAKAGDAEAWGEVYREYAPAIFRFCR
Ga0137397_105011662	3300012685	Vadose Zone Soil	MSAPGISEPTEAITRAKAGDAEAWGQLYHDYAPAIFRFCRR
Ga0137396_104465652	3300012918	Vadose Zone Soil	MSAPGITEPTEAIARARAGDAEAWGELYREYAPAMFRF
Ga0137396_109388661	3300012918	Vadose Zone Soil	MDAPWPERMSAPGKTEPLVAIARARTGDADAWGVLYREYAAAIFRF
Ga0137396_111742671	3300012918	Vadose Zone Soil	MNAPGITEPTDAITRAKAGDAEAWGQLYHDYAPAIFRF
Ga0137359_106039141	3300012923	Vadose Zone Soil	MNAPGITEPTEVITRARAGDADAWGELYHDYAPAIFR
Ga0137359_115154311	3300012923	Vadose Zone Soil	METLRPGRMSAPGIKESTEAIARARAGDAEAWGELYREYAVA
Ga0137419_101116211	3300012925	Vadose Zone Soil	METLRPGRMSAPGMTKPTEAIARARAGDAEAWGQLYRDYAPA
Ga0137419_119125891	3300012925	Vadose Zone Soil	MEPLRPGRMSAPGITEPTEAITRAKAGDAEAWGQLYHDYAPAIFRFCR
Ga0137404_117093041	3300012929	Vadose Zone Soil	MEALRPGRMNAPGITEPTEAIARARTGDVEAWGEL
Ga0137407_113348661	3300012930	Vadose Zone Soil	MEPLRPGRMSAPGITEPTEAITRAKAGDAEAWGQLYHDY
Ga0153915_126059751	3300012931	Freshwater Wetlands	MSTPGKTEPAGAIARAQAGNAEAWGELYQEYAPAIFRF
Ga0181527_10224281	3300014153	Bog	MSAPGKTEPTDLVVRARTGDAEAWGDLYREFAPAIFR
Ga0181532_101817003	3300014164	Bog	MEPLRPGQISVPGKTEPMDLIVQARTGDTQAWGDLYREYAPAIFR
Ga0167661_10600272	3300015167	Glacier Forefield Soil	MSSPGIAEPTEAIARARAGDAQAWGELYHDYAPAIF
Ga0137418_110210652	3300015241	Vadose Zone Soil	MSAPGTGQSTEAIARARAGDQEAWGDLYREFAPAI
Ga0182041_105235391	3300016294	Soil	MEPLRPGQVSVPGKTEPLDLIAQARAGDTQAWGDLYREFAPAIFRF
Ga0182035_100963451	3300016341	Soil	MEPLRPGRMSAPGKTEPTDLIARVRAVDTQAWGDLYREF
Ga0187779_110387801	3300017959	Tropical Peatland	MEPLKPGRMSVPGITEPKDLIVRARAGDTQAWGDLYRDYAPAIFRFCRR
Ga0187776_107269821	3300017966	Tropical Peatland	MESQKSGRMSTPGTTESAEAIARARAGDANAWGELYR
Ga0187781_110155461	3300017972	Tropical Peatland	MEPLRPGHLSVPGKTEPMALIAQARAGDTQAWGDLY
Ga0187857_105145271	3300018026	Peatland	MSAPGKTEPTEAVARARAGDADAWGELYREFAPAIF
Ga0187769_102715961	3300018086	Tropical Peatland	MSAPGTTEPAEAIARARAGDANAWGELYREYAPAIFR
Ga0187769_109945141	3300018086	Tropical Peatland	METQKPGRMSAPGTTEPAEAIARARAGDANAWGELYREYAPAIFR
Ga0187770_111043511	3300018090	Tropical Peatland	MEPLRPGRDRVPGITEPKDLIVRARAGDTQAWGDLYR
Ga0187770_112302351	3300018090	Tropical Peatland	MEPLRLGRMSAPGKTEPTDVVVRARTGDAEAWGDLYREFAPAIFRFC
Ga0193721_11656041	3300020018	Soil	MGTSRPGRMNAPGITEPTEAIARARAGDAEAWGELYRDYAPAIF
Ga0179592_100169731	3300020199	Vadose Zone Soil	MNAPGITEPTEAIARARAGDAEAWGELYRDYAPAIFRF
Ga0210401_103708531	3300020583	Soil	MSVPGMTETTEAVARARAGDADAWGELYRDFAPAIF
Ga0210406_104646011	3300021168	Soil	MSVPGMTETTEAVARARAGDADAWGELYRDYAPAIFR
Ga0210393_104911161	3300021401	Soil	MSAPGKTEPTEAVARARAGDADAWGDLYREFAPAIFRF
Ga0210394_117557761	3300021420	Soil	MSAPGKTEPTELIARARTGDTQAWGDLYREFAPAIFRF
Ga0126371_132653831	3300021560	Tropical Forest Soil	MEPLRPGQVSVLGKTEPLDLIAQARAGDTQAWGDLYREFAP
Ga0247665_10445991	3300024219	Soil	MSEPGVTETTEAVARARAGDADAWGELYRNFAPAIF
Ga0247687_10378901	3300024286	Soil	MEAPRPGRMSAPGTTESAEAIARARAGDQEAWGDLY
Ga0209839_100660422	3300026294	Soil	MEPLNQGRMSAPGQIEPTELIARARAGDTQAWGDL
Ga0209234_11546031	3300026295	Grasslands Soil	METQRPGRMSAPGITERTEAIARARAGDADAWGELYREYAPAIF
Ga0209154_12624572	3300026317	Soil	METLRPGRMSAPGIKEPTEAIARARTGDAEAWGELYR
Ga0209687_12139651	3300026322	Soil	METLRPGRMSAPGIKEPTEAIARARAGDAEAWGELYRDYA
Ga0257179_10508671	3300026371	Soil	MGTPRPGRMNAPGKTEPTEAIARARAGDAEAWGELYREYAPAMFRF
Ga0209056_104291331	3300026538	Soil	MSAPGIKEPTEAIARARAGDAEAWGELYRDYAPAIFRF
Ga0207630_1053741	3300026760	Soil	MEPLRPGPMSVPGMTDTTEAVARARAGDADAWGELYRDF
Ga0209219_11064311	3300027565	Forest Soil	MDAPRPDRMSAPGKTEPVEAIARARAGDADAWGELYREYAPAIF
Ga0209422_10025783	3300027629	Forest Soil	MSSPGIAEPTEAIARAKAGDAQAWGQLYHDYAPAIFRFCR
Ga0209588_10489701	3300027671	Vadose Zone Soil	MSVPGITEPTEAITRAKAGDAEAWGQLYHDYAPAIF
Ga0209588_10598702	3300027671	Vadose Zone Soil	MSAPGISEPTEAITRAKAGDAEAWGQLYHDYAPAIFRFC
Ga0208991_12366591	3300027681	Forest Soil	MSSPGIVEPTEAIARARAGDAQAWGELYHDYAPAIF
Ga0209038_100593141	3300027737	Bog Forest Soil	MEPLKPGLISVPGKTEPMDLIAQARAGDTQAWGDLYREY
Ga0209448_100403451	3300027783	Bog Forest Soil	MEPLRPGPKSVPGMTETTEAVARARAGDADAWGELYRDFAP
Ga0209656_100173451	3300027812	Bog Forest Soil	METLRPGRMSPTATSEPTEVVAKARAGDAEAWGQLYHDYAP
Ga0209067_103495971	3300027898	Watersheds	METLRPGRMSVPGTTEPTEVITRARAGDAEAWGELYREY
Ga0247684_10380782	3300028138	Soil	MEPLRPGPKSVPGMTDTTEAVARARAGDADAWGELYRDFAPAI
Ga0302176_104703231	3300030057	Palsa	MSPSGTIEPTEVVAKARAGDAEAWGQLYHDYAPAIFR
Ga0170819_166163482	3300031469	Forest Soil	MSAPGKTEPTECIARARAGDADAWGDLYREFAPAIF
Ga0318538_108328791	3300031546	Soil	MEPLIPGHSSVPGKTEPTDLIARARAGDTQAWSDLYREYA
Ga0306918_109429281	3300031744	Soil	MEPLRPGRMSAPGKTEPTDLIVRARAGDTQAWGDL
Ga0307477_110683612	3300031753	Hardwood Forest Soil	MDAPRPERMSAPGKTEPTEAIARARTGDADAWGVLYR
Ga0318546_109694802	3300031771	Soil	MEPLRPGRMSAPGKTEPTDLIARARAGDTQAWGDLYREFA
Ga0310910_112108552	3300031946	Soil	MEPLRPGRMSAPGKTEPTDLIARARAGDTQAWGDLYREFAPAI
Ga0306926_128988522	3300031954	Soil	MEPLRPGRMSVPGITEPKDLIVRARAGDTQAWGDLYREY
Ga0307479_100425724	3300031962	Hardwood Forest Soil	MSSPGIAEPTEAIARAKAGDAQAWGQLYHDYAPAIFR
Ga0318510_105320851	3300032064	Soil	METQRPGRMSAPGITEPTEAIARARAGDAEAWGELYRDYAPAI
Ga0306924_107724172	3300032076	Soil	MEPLRPGRMSAPGKTEPTDLIARARAGDTQAWGDLYREFAPAIF
Ga0318577_100260492	3300032091	Soil	MSAPGITEPTEAIARARAGDAEAWGELYRDYAPAIFR
Ga0335082_101900171	3300032782	Soil	MEAPKPGRMSAPGTAESTEAIARAKAGDPEAWGELYRD
Ga0335080_105747581	3300032828	Soil	MEPLKPGRMSVPGITEPKDLIVRARAGDTQAWGDLYREYAP
Ga0335071_100211301	3300032897	Soil	MSVPGITEPKDLIVRARAGDTQAWGDLYREYAPAI
Ga0335077_101754142	3300033158	Soil	MEPLKPGRMSAPGKTEPTELIVRARTGDTQAWGDLYREYAPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092651

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences