Metagenome / Metatranscriptome Family F092503

Basic Information
Family ID	F092503
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	73 residues
Representative Sequence	DAVNLGVLPLGAAGFLGWILVKSLQSASTSQIWSLVAIIGVGVVLMLIARVVLRPQFFHLRRETEGPIR
Number of Associated Samples	100
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.87 %
% of genes near scaffold ends (potentially truncated)	94.39 %
% of genes from short scaffolds (< 2000 bps)	95.33 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (83.178 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.037 % of family members)
Environment Ontology (ENVO)	Unclassified (27.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.318 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.89% β-sheet: 0.00% Coil/Unstructured: 37.11%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00724	Oxidored_FMN	61.68
PF07992	Pyr_redox_2	9.35
PF13450	NAD_binding_8	4.67
PF13520	AA_permease_2	2.80

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	61.68
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	61.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
All Organisms	root	All Organisms	16.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
cellular organisms	root	All Organisms → cellular organisms	16.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.41 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	5.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.48 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.54 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.61 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.61 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.87 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.61 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.87 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.61 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.87 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.18 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5.61 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.87 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig45556	Not Available	903	Open in IMG/M
2166559006\|FI_contig16458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	790	Open in IMG/M
2189573001\|GZR05M101EKQ0S	Not Available	501	Open in IMG/M
2199352025\|deepsgr__Contig_130245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	790	Open in IMG/M
3300001632\|JGI20235J16296_1010682	Not Available	502	Open in IMG/M
3300005339\|Ga0070660_100509285	Not Available	1002	Open in IMG/M
3300005356\|Ga0070674_100930736	Not Available	759	Open in IMG/M
3300005366\|Ga0070659_100346550	Not Available	1246	Open in IMG/M
3300005435\|Ga0070714_100852678	Not Available	883	Open in IMG/M
3300005436\|Ga0070713_102343577	Not Available	516	Open in IMG/M
3300005437\|Ga0070710_11372505	Not Available	527	Open in IMG/M
3300005439\|Ga0070711_100647666	Not Available	885	Open in IMG/M
3300005439\|Ga0070711_100804376	Not Available	797	Open in IMG/M
3300005456\|Ga0070678_100163526	Not Available	1806	Open in IMG/M
3300005471\|Ga0070698_100520445	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300005591\|Ga0070761_10728862	Not Available	621	Open in IMG/M
3300005616\|Ga0068852_101131186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300006175\|Ga0070712_100177003	Not Available	1659	Open in IMG/M
3300006175\|Ga0070712_100646235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300006577\|Ga0074050_11508734	Not Available	548	Open in IMG/M
3300006581\|Ga0074048_13049892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1143	Open in IMG/M
3300006804\|Ga0079221_10860410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300006881\|Ga0068865_100121934	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1940	Open in IMG/M
3300009093\|Ga0105240_10291060	Not Available	1872	Open in IMG/M
3300009098\|Ga0105245_10212146	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1864	Open in IMG/M
3300009672\|Ga0116215_1046720	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1969	Open in IMG/M
3300009792\|Ga0126374_11434784	Not Available	564	Open in IMG/M
3300010046\|Ga0126384_11489031	Not Available	634	Open in IMG/M
3300010399\|Ga0134127_12485362	Not Available	598	Open in IMG/M
3300011106\|Ga0151489_1294470	Not Available	510	Open in IMG/M
3300011120\|Ga0150983_16608144	Not Available	537	Open in IMG/M
3300012948\|Ga0126375_11676870	Not Available	550	Open in IMG/M
3300013296\|Ga0157374_10603329	Not Available	1108	Open in IMG/M
3300014157\|Ga0134078_10497477	Not Available	566	Open in IMG/M
3300014201\|Ga0181537_10049648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2847	Open in IMG/M
3300014497\|Ga0182008_10282896	Not Available	863	Open in IMG/M
3300014968\|Ga0157379_10724062	Not Available	935	Open in IMG/M
3300015371\|Ga0132258_10985786	Not Available	2129	Open in IMG/M
3300016294\|Ga0182041_10165986	Not Available	1722	Open in IMG/M
3300016341\|Ga0182035_10657500	Not Available	910	Open in IMG/M
3300016387\|Ga0182040_10608178	Not Available	885	Open in IMG/M
3300017792\|Ga0163161_11487273	Not Available	594	Open in IMG/M
3300017942\|Ga0187808_10023466	Not Available	2512	Open in IMG/M
3300017942\|Ga0187808_10386804	Not Available	638	Open in IMG/M
3300017959\|Ga0187779_11180836	Not Available	538	Open in IMG/M
3300017961\|Ga0187778_11103506	Not Available	553	Open in IMG/M
3300018086\|Ga0187769_10703903	Not Available	764	Open in IMG/M
3300018088\|Ga0187771_10961202	Not Available	725	Open in IMG/M
3300021088\|Ga0210404_10053278	Not Available	1912	Open in IMG/M
3300021403\|Ga0210397_10032929	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300022724\|Ga0242665_10102858	Not Available	850	Open in IMG/M
3300024249\|Ga0247676_1035803	Not Available	800	Open in IMG/M
3300024288\|Ga0179589_10208848	Not Available	856	Open in IMG/M
3300025898\|Ga0207692_10376644	Not Available	880	Open in IMG/M
3300025898\|Ga0207692_10392885	Not Available	863	Open in IMG/M
3300025905\|Ga0207685_10076999	Not Available	1369	Open in IMG/M
3300025906\|Ga0207699_10336604	Not Available	1062	Open in IMG/M
3300025929\|Ga0207664_11269058	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300025931\|Ga0207644_10622404	Not Available	897	Open in IMG/M
3300025960\|Ga0207651_11603495	Not Available	586	Open in IMG/M
3300026041\|Ga0207639_10179596	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1799	Open in IMG/M
3300026088\|Ga0207641_11667205	Not Available	639	Open in IMG/M
3300026984\|Ga0208732_1024541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300027725\|Ga0209178_1022326	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1974	Open in IMG/M
3300027787\|Ga0209074_10148217	Not Available	842	Open in IMG/M
3300028015\|Ga0265353_1027737	Not Available	562	Open in IMG/M
3300030740\|Ga0265460_11230756	Not Available	720	Open in IMG/M
3300030741\|Ga0265459_11472527	Not Available	774	Open in IMG/M
3300030743\|Ga0265461_12748322	Not Available	586	Open in IMG/M
3300030743\|Ga0265461_13195361	Not Available	552	Open in IMG/M
3300031057\|Ga0170834_103479907	Not Available	555	Open in IMG/M
3300031474\|Ga0170818_106405521	Not Available	555	Open in IMG/M
3300031561\|Ga0318528_10558082	Not Available	615	Open in IMG/M
3300031668\|Ga0318542_10259632	Not Available	885	Open in IMG/M
3300031668\|Ga0318542_10746951	Not Available	512	Open in IMG/M
3300031679\|Ga0318561_10348518	Not Available	812	Open in IMG/M
3300031723\|Ga0318493_10851653	Not Available	515	Open in IMG/M
3300031747\|Ga0318502_10368049	Not Available	852	Open in IMG/M
3300031751\|Ga0318494_10374888	Not Available	824	Open in IMG/M
3300031765\|Ga0318554_10272755	Not Available	963	Open in IMG/M
3300031768\|Ga0318509_10338509	Not Available	842	Open in IMG/M
3300031771\|Ga0318546_11078747	Not Available	565	Open in IMG/M
3300031778\|Ga0318498_10098254	Not Available	1326	Open in IMG/M
3300031795\|Ga0318557_10515174	Not Available	549	Open in IMG/M
3300031831\|Ga0318564_10269546	Not Available	754	Open in IMG/M
3300031832\|Ga0318499_10370320	Not Available	550	Open in IMG/M
3300031835\|Ga0318517_10279526	Not Available	754	Open in IMG/M
3300031859\|Ga0318527_10531846	Not Available	502	Open in IMG/M
3300031890\|Ga0306925_12220309	Not Available	510	Open in IMG/M
3300031897\|Ga0318520_10172980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1263	Open in IMG/M
3300032000\|Ga0310903_10793332	Not Available	518	Open in IMG/M
3300032008\|Ga0318562_10860781	Not Available	518	Open in IMG/M
3300032044\|Ga0318558_10716624	Not Available	500	Open in IMG/M
3300032052\|Ga0318506_10238602	Not Available	805	Open in IMG/M
3300032059\|Ga0318533_11080124	Not Available	588	Open in IMG/M
3300032064\|Ga0318510_10176309	Not Available	855	Open in IMG/M
3300032180\|Ga0307471_101915486	Not Available	742	Open in IMG/M
3300032770\|Ga0335085_10332694	Not Available	1786	Open in IMG/M
3300032783\|Ga0335079_12076359	Not Available	545	Open in IMG/M
3300032829\|Ga0335070_10409533	Not Available	1296	Open in IMG/M
3300032892\|Ga0335081_11210462	Not Available	860	Open in IMG/M
3300032896\|Ga0335075_10505353	Not Available	1234	Open in IMG/M
3300032896\|Ga0335075_11723394	Not Available	508	Open in IMG/M
3300032897\|Ga0335071_10485864	Not Available	1187	Open in IMG/M
3300032955\|Ga0335076_10123481	Not Available	2511	Open in IMG/M
3300033134\|Ga0335073_10333810	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1804	Open in IMG/M
3300033158\|Ga0335077_11927318	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.18%
Host-Associated	Host-Associated	15.89%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.37%
Plants	Host-Associated → Plants	15.89%
Aquatic	Environmental → Aquatic	2.80%
Modeled	Engineered → Modeled	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.54%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.40%
Loam	Environmental → Terrestrial → Soil → Loam	15.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.28%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300001632	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0556.00003390	2166559005	Simulated	MDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVILMLIARVVLRPQFFHLRRETEGPIR
FI_00577100	2166559006	Grass Soil	MDAVNLGVLPLAAAGFLGWIMVKSLQAAPAAQIWSLVAIIAVGVVLMLIARLVLRPQFFHLRRETEGPVR
FD2_07420070	2189573001	Grass Soil	MDAINLGVXPLAAAGFLGWILVKALQVAPASQIWTLVAIIAVGIVLMLVARIVLRPQFFHLRRETEGPVR
deepsgr_02100840	2199352025	Soil	MDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVVLMLVARVVLRPQFFHLRRETEGPIR
JGI20235J16296_10106822	3300001632	Forest Soil	VFSNFLDGVILGVLPLAAAGFLGWILVKSIAAATGPQIWSLVGIMAVGVILMLVARFVLRPQFFHLRRETEGRIR*
Ga0070660_1005092852	3300005339	Corn Rhizosphere	LVKSLQSASVSQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGPIR*
Ga0070674_1009307361	3300005356	Miscanthus Rhizosphere	GVLPLGAAGFLGWILVKSLQSASASQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGSIR*
Ga0070659_1003465501	3300005366	Corn Rhizosphere	AVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0070714_1008526782	3300005435	Agricultural Soil	IFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLIAIIGVGVVLMLIARVVLRPQFFHLRRETEGHIR*
Ga0070713_1023435771	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0070710_113725052	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGSIR*
Ga0070711_1006476662	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLIAIIGVGVVLMLIARVVLRPQFFHLRRETEGHIR*
Ga0070711_1008043761	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVILMLIARVVLRPQFFHLRRETEGPIR*
Ga0070678_1001635262	3300005456	Miscanthus Rhizosphere	GVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGSIR*
Ga0070698_1005204453	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	YILTALAAIVYYWRRIFSNALDAVNLGVLPLAAAGFLGWIMVKSLQAAPSAQIWSLVAIIAVGIVLMLIARLVLRPQFFHLRRETEGPVR*
Ga0070761_107288622	3300005591	Soil	AAAAFLGWILVKSLLAASSPQVWSLVGIVGVGLVLMLVARLVLRPQFFHLKPETEGRIR*
Ga0068852_1011311861	3300005616	Corn Rhizosphere	WRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0070712_1001770032	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0070712_1006462351	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLIAIIGVGVVLMLIARVVLRPQFFHLRRETEGHIR*
Ga0074050_115087341	3300006577	Soil	LDAVILGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVALMLAARVVLRPQFFHLRRETEGPIR*
Ga0074048_130498922	3300006581	Soil	LAAITYYWRRIFSNVLDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVALMLAARVVLRPQFFHLRRETEGPLR*
Ga0079221_108604101	3300006804	Agricultural Soil	AIIYYWRRIFSNVMDAINLGVLPLGAAGFLGWILVKSLQSASVSQIWSLIAIIGVGVVLMLIARVVLRPQFFHLRRETEGPIR*
Ga0068865_1001219342	3300006881	Miscanthus Rhizosphere	LPLGAAGFLGWILVKSLQSASASQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGSIR*
Ga0105240_102910602	3300009093	Corn Rhizosphere	IIYYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0105245_102121462	3300009098	Miscanthus Rhizosphere	FSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGSIR*
Ga0116215_10467202	3300009672	Peatlands Soil	FSNVLDAVILGVLPLAAAGFLGWILVKSIMAAPSAQIWSLVGIVGVGIVLMLVARVVLRPQFFHLRRETEGRVR*
Ga0126374_114347842	3300009792	Tropical Forest Soil	RIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0126384_114890311	3300010046	Tropical Forest Soil	GWIMVKSLQAAPASQIWTLVGIIGVGIALMIAARLILRPQFFHLRRETEGPAR*
Ga0134127_124853622	3300010399	Terrestrial Soil	LAAITYYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGSIR*
Ga0151489_12944701	3300011106	Soil	LVKSLQSAPISQIWSLVAIIGVGVVLMLAARVVLRPQFFHLRRETEGPLR*
Ga0150983_166081441	3300011120	Forest Soil	YYWRRVFSNVLDGVILGILPLAAAGFLGWIFVKSLQAAPSPQIWSLVGIVGVGVILMLIARLVLRPQFFHLKRETEGRVR*
Ga0126375_116768701	3300012948	Tropical Forest Soil	IFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0157374_106033291	3300013296	Miscanthus Rhizosphere	TYYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0134078_104974771	3300014157	Grasslands Soil	PLGAAGFLGWILVKSLQSAPISQIWSLVAIIGVGVVLMLAARLVLRPQFFHLRRETEGPIR*
Ga0181537_100496481	3300014201	Bog	ILTALAAIVYYWRRIFSNAMDGLIIGILPLAAAAFLGWLLVKSLLVSTAPQIWSLVGIIGVGVILMLIARFVLKPQFFHLRRETEGPVR*
Ga0182008_102828962	3300014497	Rhizosphere	SRRDAITLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVVLMLIARVVLRPQFFHLRRETEGPIR*
Ga0157379_107240621	3300014968	Switchgrass Rhizosphere	LGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR*
Ga0132258_109857862	3300015371	Arabidopsis Rhizosphere	ALNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVVLMLIARVVLRPQFFHLRRETEGPLR*
Ga0182041_101659861	3300016294	Soil	AFYILTALAAITYYWRRVFSNALDAVILGVLPLAAAGFLGWILVKSLMAAPAAQIWSLVAIVGVGVLLMLTARFVLRPQFFHLRRETEGPAR
Ga0182035_106575001	3300016341	Soil	VLPLGAAGFLGWILVKTLQAAPTSQLWTLVAIIGVGVVLMLVARIVLRPQFFHLRRETEGPVR
Ga0182040_106081782	3300016387	Soil	LPLGAAGFLGWILVRSVQAAPASQIWTMVAIIAVGIVLMLVARVVLRPQFFHLRRETEGPVR
Ga0163161_114872732	3300017792	Switchgrass Rhizosphere	ILTALAAITYYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR
Ga0187808_100234661	3300017942	Freshwater Sediment	SNVLDAVILGVLPLAAAGFLGWILVKSIMAAPSAQIWSLVGIVGVGIVLMLVARIVLRPQFFHLRRETEGRAR
Ga0187808_103868042	3300017942	Freshwater Sediment	LPLAAAGFLSWILVKSLQAAPAAQIWSLVAIVGVGIILMIVARVVLRPQFFHLKRETEGRVR
Ga0187779_111808361	3300017959	Tropical Peatland	ALAAITYYWRRVFSNVLDAVILGVLPLAAAGFLGWILVKSLQTAPSAQIWSLVGIVGVGLVLMLVARFILRPQFFHLRRETEGPIR
Ga0187778_111035062	3300017961	Tropical Peatland	WILVKSLQTAPSAQIWSLVGIVGVGLVLMLVARFILRPQFFHLRRETEGPIR
Ga0187769_107039031	3300018086	Tropical Peatland	YYWRRVFSNVLDGVILGVLPLAAAGFLGWILVKSIAAASAAQVWSLAGIVAVGVVLMLVARFVLRPQFFHLRRETEGRVR
Ga0187771_109612022	3300018088	Tropical Peatland	YILTALAAITYYWRRVFSSVMDGVILGVLPLAAAGFLGWILVKSIIVAPSAQIWALIGIVGVGVFLMLLARIVLRPQFFHLRRETEGPIR
Ga0210404_100532781	3300021088	Soil	LAAVVYYWRRVFSNVLDGVILGVLPLAAAGFLSWIFVKSLQAAAAPQIWSLVGIVGVGVILMLIARLVLRPQFFHLKRETEGRVR
Ga0210397_100329291	3300021403	Soil	ALTAITYFWRRVFSNPLDGVILGILPLAAAGFLGWIIVKSLQTASAAQIWSLAGILGIGIAFMLLARLVLRPQFFHLRRQTEGPVR
Ga0242665_101028581	3300022724	Soil	WIMVKSLQAAPAAQIWSLVAIIAVGGVLMLIARLVLRPQFFHLRRETEGPVR
Ga0247676_10358031	3300024249	Soil	GAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR
Ga0179589_102088481	3300024288	Vadose Zone Soil	WRRIFSGALDAVILGLLPLGAAAFLGWILVKSLQAAPPSQLWTLVGIIGIGVVLMLTARFVLRPQFFHLRRETEGPVR
Ga0207692_103766442	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLIAIIGVGVVLMLIARVVLRPQFFHLRRETEGHIR
Ga0207692_103928852	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGSIR
Ga0207685_100769991	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	HLQNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR
Ga0207699_103366042	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GAAGFLGWILVKSLQSASVSQIWSLVAIISVGVILMLIARVVLRPQFFHLRRETEGSIR
Ga0207664_112690581	3300025929	Agricultural Soil	AVNLGVLPLAAAGFLGWIMVKSLQAAPSAQIWSLVAIIAVGIVLMLIARLVLRPQFFHLRRETEGPVR
Ga0207644_106224042	3300025931	Switchgrass Rhizosphere	VNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR
Ga0207651_116034951	3300025960	Switchgrass Rhizosphere	AITYYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR
Ga0207639_101795962	3300026041	Corn Rhizosphere	FLGWILVKSLQSASVSQIWSLVAIIGVGVILMLIARVVLRPQFFHLRRETEGSIR
Ga0207641_116672051	3300026088	Switchgrass Rhizosphere	RIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIAVGVLLMLIARVVLRPQFFHLRRETEGPIR
Ga0208732_10245411	3300026984	Forest Soil	VLPLAAAGFLGWIMIKSLQAAPSAQIWSLVAIIAVGVVLMLVARVVLRPQFFHLKRETEGPVR
Ga0209178_10223262	3300027725	Agricultural Soil	ILVKSLQSASVSQIWSLIAIIGVGVVLMLIARVVLRPQFFHLRRETEGPIR
Ga0209074_101482172	3300027787	Agricultural Soil	MERRSFLTALAAIIYYWRRIFSNVMDAINLGVLPLGAAGFLGWILVKSLQSASVSQIWSLIAIIGVGVVLMLIARVVLRPQFFHLRRETEGPIR
Ga0265353_10277371	3300028015	Soil	TALTAITYFWRRVFSNPLDGVILGILPLAAAGFLGWIIVKSLQAASAAQIWSLAGILGIGIAFMLLARLVLRPQFFHLRRQTEGPVR
Ga0265460_112307561	3300030740	Soil	RVFSNFLDGVILGVLPLAAAGFLGWILVKSIAAATGPQIWSLVGIMAVGVILMLVARFVLRPQFFHLRRETEGRIR
Ga0265459_114725272	3300030741	Soil	FYILTALAAIMYYWRRVFSNFLDGVILGVLPLAAAGFLGWILVKSIAAATGPQIWSLVGIMAVGVILMLVARFVLRPQFFHLRRETEGRIR
Ga0265461_127483221	3300030743	Soil	LAAAAFLCWLLVKSLLVASTPQIWSLVGIFGAGVILMLIARFVLKPQFFHLRRETEGPVR
Ga0265461_131953612	3300030743	Soil	GWILVKSLIAASSPQVWSLIGIVGAGVVLMLVARFVLRPQFFHLKPETEGRIR
Ga0170834_1034799072	3300031057	Forest Soil	AFYILTALAAIVYYWRRVFSNVLDAVNLGVLPLAAAGFLGWIMVKSLQAAPSAQIWSLVAIIAVGIVLMLIARLVLRPQFFHLRRETEGPVR
Ga0170818_1064055211	3300031474	Forest Soil	PGWILVKSLQVAPSSQLWTLVGIVSLGVVFMLAARFVLRPQFFHLRRETEGPVR
Ga0318528_105580822	3300031561	Soil	FYIFTALAAVIYYWRRIFSNVMDAVTLGVLPLGAAGFLGWILVRSVQAAPASQIWTMVAIIAVGIVLMLVARVVLRPQFFHLRRETEGPVR
Ga0318542_102596321	3300031668	Soil	GWILVRSVQAAPASQIWTMVAIIAVGIVLMLVARVVLRPQFFHLRRETEGPVR
Ga0318542_107469511	3300031668	Soil	VLDAVTLGVLPLGAAGFLGWILVKSLQVAPTPQLWTLVAIIGVGIVLMLVARLVLRPQFFHLKRETEDPVR
Ga0318561_103485181	3300031679	Soil	LGWILVKSLQVAPTPQLWTLVAIIGVGIVLMLVARLVLRPQFFHLKRETEDPVR
Ga0318493_108516531	3300031723	Soil	AAFYILTALAAITYYWRRVFSNALDAVILGVLPLAAAGFLGWLLVKSLQAATSAQIWSLVAIVSVGVLLMLVARVVLRPQFFHLRRETESRVR
Ga0318502_103680491	3300031747	Soil	NPMDAVILGVLPLGAAGFLGWLLVKSLMAASAPQVWSLVAIIGVGVLLMLAARILLRPQFFHLRRESEGPIR
Ga0318494_103748881	3300031751	Soil	AAFYIFTALAAIMYYWRRIFGSVIDAVTLGVLPLGAAGFLGWILVKTLQAAPTSQLWTLVAIIGVGVVLMLVARIVLRPQFFHLRRETEGPVR
Ga0318554_102727552	3300031765	Soil	FGSVIDAVTLGVLPLGAAGFLGWILVKTLQAAPTSQLWTLVAIIGVGVVLMLVARIVLRPQFFHLRRETEGPVR
Ga0318509_103385092	3300031768	Soil	VTLGVLPLGAAGFLGWILVKSLQVAPTPQLWTLVAIIGVGIVLMLVARLVLRPQFFHLKRETEDPVR
Ga0318546_110787471	3300031771	Soil	LAAVIYYWRRIFSNVMDAVTLGVLPLGAAGFLGWILVRSVQAAPASQIWTMVAIIAVGIVLMLVARVVLRPQFFHLRRETEGPVR
Ga0318498_100982542	3300031778	Soil	TALAAIMYYWRRIFGSVIDAVTLGVLPLGAAGFLGWILVKTLQAAPTSQLWTLVAIIGVGVVLMLVARIVLRPQFFHLRRETEGPVR
Ga0318557_105151742	3300031795	Soil	ILVKTLQAAPTSQLWTLVAIIGVGVVLMLVARIVLRPQFFHLRRETEGPVR
Ga0318564_102695461	3300031831	Soil	VMDAVTLGVLPLGAAGFLGWILVRSVQAAPASQIWTMVAIIAVGIVLMLVARVVLRPQFFHLRRETEGPVR
Ga0318499_103703201	3300031832	Soil	VLTALAANVYYWRRVFSNALDAVILGVLPLAAAGFLGWILVKSLMAAPAAQIWSLVAIVGVGVLLMLTARFVLRPQFFHLRRETEGPAR
Ga0318517_102795261	3300031835	Soil	FYIFTALAAVIYYWRRVFSSVLDAVTLGVLPLGAAGFLGWILVKSLQVAPTPQLWTLVAIIGVGIVLMLVARLVLRPQFFHLKRETEDPVR
Ga0318527_105318461	3300031859	Soil	LVKSLQVAPTPQLWTLVAIIGVGIVLMLVARLVLRPQFFHLKRETEDPVR
Ga0306925_122203091	3300031890	Soil	DAINLGVLPLAAAGFLGWILVKSLQAAPASQLWTLVAIIGVGIALMLIARIVLRPQFFHLRRETEGPAR
Ga0318520_101729803	3300031897	Soil	VIDAVTLGVLPLGAAGFLGWILVKTLQAAPTSQLWTLVAIIGVGVVLMLVARIVLRPQFFHLRRETEGPVR
Ga0310903_107933321	3300032000	Soil	ILTALAAITYYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASASQIWSLVAIIGVGVALMLIARVVLRPQFFHLRRETEGPIH
Ga0318562_108607812	3300032008	Soil	TALAAIMYYWRRIFSNPMDAVILGVLPLGAAGFLGWLLVKSLMAASAPQVWSLVAIIGVGVLLMLAARILLRPQFFHLRRESEGPIR
Ga0318558_107166242	3300032044	Soil	TALAAITYYWRRVFSNALDAVILGVLPLAAAGFLGWILVKSLMAAPAAQIWSLVAIVGVGVLLMLTARFVLRPQFFHLRRETEGPAR
Ga0318506_102386022	3300032052	Soil	NALDAVILGVLPLAAAGFLGWILVKSLMAAPAAQIWSLVAIVGVGVLLMLTARFVLRPQFFHLRRETEGPAR
Ga0318533_110801242	3300032059	Soil	VLPLGAAGFLGWILVRAVQAAPAAQIWSLVAIVGVGVLLMLAARVVLRPQYFHLRRETEGRTR
Ga0318510_101763091	3300032064	Soil	RVFSSVMDAVTLGVLPLGAAGFLGWILVKSLQVAPTPQLWTLVAIIGVGIVLMLVARLVLRPQFFHLKRETEDPVR
Ga0307471_1019154862	3300032180	Hardwood Forest Soil	TALAAVIYYWRRIFSNVMDAVNLGVLPLGAAGFLGWILVKSLQSASVSQIWSLVAIIGVGVILMLIARVVLRPQFFHLRRETEGPIR
Ga0335085_103326942	3300032770	Soil	AAFYIFTALAAVMYYWRRIFGSVMDAVVLGVLPLGAAAFLGWIMVKSLQAAPASQLWTMVAIIGVGVVLMLIARVVLRPQFFHLKRETEGPVR
Ga0335079_120763592	3300032783	Soil	GSVMDAVVLGVLPLGAAGFLGWIMIKSLQAAPASQLWTMVAIIGVGVVLMLIARVVLRPQFFHLKRETEGPVR
Ga0335070_104095331	3300032829	Soil	ALAAVMYYWRRIFNSVLDGIVLGVLPLAAAGFLGWILVKTLQGAPQAQIWSLVAIIGVGVVLMLSARIVLRPQFFHLRRETEGRAR
Ga0335081_112104621	3300032892	Soil	LGVLPLGAAGFLGWLLVKSLMAASAPQVWSLVAIIGVGVLLMIAARILLRPQFFHLRRESEGPIR
Ga0335075_105053532	3300032896	Soil	NVLDAVILGLLPLAAAGFLGWILVKSIQAAPPAQVWSLIGIVGVGIFLMLVARLVLRPQFFHLRRETEGQMR
Ga0335075_117233942	3300032896	Soil	ALAAITYYWRRIFSNVMDGIIIGVLPMAAAAFLCWLLVKSLLVSTAPQIWSLVGIIAVGVILMLIARFVLKPQFFHLRRETEGPVR
Ga0335071_104858641	3300032897	Soil	LSWILVKSLQAAPASQLWTMVAIIGVGVILMLIARLVLRPQFFHLKRETEGPVR
Ga0335076_101234811	3300032955	Soil	FLGWILVKSLQAAPPAQLWSMVAIIGVGIILMLIARVVLRPQFFHLKRETEGPVR
Ga0335073_103338101	3300033134	Soil	DAVNLGVLPLGAAGFLGWILVKSLQSASTSQIWSLVAIIGVGVVLMLIARVVLRPQFFHLRRETEGPIR
Ga0335077_119273182	3300033158	Soil	GAAGFLGWLLVKSLMAASAPQVWSLVAIIGVGVLLMIAARILLRPQFFHLRRESEGPIR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092503

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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