Metagenome / Metatranscriptome Family F092402

Basic Information
Family ID	F092402
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	44 residues
Representative Sequence	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPVAVPKFEDL
Number of Associated Samples	97
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.64 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	88.79 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Unclassified (64.486 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.692 % of family members)
Environment Ontology (ENVO)	Unclassified (26.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.206 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.71% Coil/Unstructured: 74.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00005	ABC_tran	70.09
PF12848	ABC_tran_Xtn	22.43
PF00464	SHMT	5.61
PF03477	ATP-cone	0.93
PF00578	AhpC-TSA	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	5.61
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	5.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
All Organisms	root	All Organisms	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
cellular organisms	root	All Organisms → cellular organisms	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	19.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	13.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.21 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	13.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.61 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	3.74 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	13.08 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	3.74 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1.87 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.93 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	13.08 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	3.74 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples	1.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	4.67 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	3.74 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	4.67 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	3.74 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	4.67 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	4.67 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	4.67 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	4.67 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	4.67 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	4.67 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	3.74 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Caryophyllales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales	0.93 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	3.74 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Chenopodiaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae	0.93 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	3.74 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Betoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	3.74 %
Endopterygota	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	3.74 %
Coleoptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	3.74 %
Polyphaga	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	3.74 %
Elateriformia	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	3.74 %
Elateroidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	3.74 %
Lampyridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	3.74 %
Luciolinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	3.74 %
Abscondita	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	3.74 %
Abscondita terminalis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	2.80 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1.87 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.93 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1034801	Not Available	544	Open in IMG/M
3300001124\|JGI12692J13336_1002136	Not Available	1123	Open in IMG/M
3300001414\|JGI20174J14864_1009018	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	557	Open in IMG/M
3300004635\|Ga0062388_102951875	Not Available	502	Open in IMG/M
3300005531\|Ga0070738_10087475	All Organisms → cellular organisms → Eukaryota	1717	Open in IMG/M
3300005537\|Ga0070730_10145115	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	1614	Open in IMG/M
3300006052\|Ga0075029_100958764	Not Available	589	Open in IMG/M
3300006176\|Ga0070765_101011132	Not Available	786	Open in IMG/M
3300006893\|Ga0073928_10932746	Not Available	594	Open in IMG/M
3300007788\|Ga0099795_10544677	Not Available	546	Open in IMG/M
3300007819\|Ga0104322_138439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2087	Open in IMG/M
3300009093\|Ga0105240_11286230	Not Available	772	Open in IMG/M
3300009500\|Ga0116229_10045307	All Organisms → cellular organisms → Bacteria → Proteobacteria	4493	Open in IMG/M
3300009525\|Ga0116220_10496079	Not Available	554	Open in IMG/M
3300009628\|Ga0116125_1041395	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	1162	Open in IMG/M
3300009651\|Ga0105859_1282950	Not Available	515	Open in IMG/M
3300009709\|Ga0116227_10515502	Not Available	908	Open in IMG/M
3300009787\|Ga0116226_11819141	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	556	Open in IMG/M
3300010379\|Ga0136449_101080428	Not Available	1280	Open in IMG/M
3300011120\|Ga0150983_11281536	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	693	Open in IMG/M
3300011120\|Ga0150983_16056557	Not Available	560	Open in IMG/M
3300012096\|Ga0137389_10445497	Not Available	1109	Open in IMG/M
3300012924\|Ga0137413_11544688	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	541	Open in IMG/M
3300012925\|Ga0137419_11756602	Not Available	530	Open in IMG/M
3300014169\|Ga0181531_10695056	Not Available	632	Open in IMG/M
3300014495\|Ga0182015_10443132	Not Available	834	Open in IMG/M
3300014498\|Ga0182019_10418811	Not Available	916	Open in IMG/M
3300014657\|Ga0181522_10281732	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	985	Open in IMG/M
3300014658\|Ga0181519_11068634	Not Available	502	Open in IMG/M
3300014838\|Ga0182030_11228032	Not Available	638	Open in IMG/M
3300015197\|Ga0167638_1112487	Not Available	507	Open in IMG/M
3300016702\|Ga0181511_1100868	Not Available	534	Open in IMG/M
3300016750\|Ga0181505_10959131	Not Available	904	Open in IMG/M
3300018008\|Ga0187888_1081663	Not Available	1408	Open in IMG/M
3300018034\|Ga0187863_10429093	Not Available	738	Open in IMG/M
3300018047\|Ga0187859_10391012	Not Available	762	Open in IMG/M
3300018085\|Ga0187772_10433202	Not Available	919	Open in IMG/M
3300020021\|Ga0193726_1202368	Not Available	834	Open in IMG/M
3300020579\|Ga0210407_10776166	Not Available	740	Open in IMG/M
3300021180\|Ga0210396_10592171	Not Available	965	Open in IMG/M
3300021181\|Ga0210388_10000662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	27665	Open in IMG/M
3300021181\|Ga0210388_10082293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2733	Open in IMG/M
3300021181\|Ga0210388_10135900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2127	Open in IMG/M
3300021181\|Ga0210388_10593776	Not Available	969	Open in IMG/M
3300021181\|Ga0210388_11032489	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	704	Open in IMG/M
3300021403\|Ga0210397_10862227	Not Available	700	Open in IMG/M
3300021405\|Ga0210387_10363681	Not Available	1279	Open in IMG/M
3300021406\|Ga0210386_10140831	All Organisms → cellular organisms → Bacteria → Proteobacteria	2011	Open in IMG/M
3300021420\|Ga0210394_10467842	Not Available	1109	Open in IMG/M
3300021420\|Ga0210394_11590175	Not Available	550	Open in IMG/M
3300021474\|Ga0210390_11525861	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300021475\|Ga0210392_10069615	All Organisms → cellular organisms → Bacteria → Proteobacteria	2231	Open in IMG/M
3300022530\|Ga0242658_1091072	Not Available	716	Open in IMG/M
3300024222\|Ga0247691_1055392	Not Available	598	Open in IMG/M
3300024325\|Ga0247678_1018524	Not Available	1053	Open in IMG/M
3300025474\|Ga0208479_1062219	Not Available	721	Open in IMG/M
3300026515\|Ga0257158_1121882	Not Available	524	Open in IMG/M
3300027439\|Ga0209332_1028533	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1056	Open in IMG/M
3300027496\|Ga0208987_1068632	Not Available	643	Open in IMG/M
3300027528\|Ga0208985_1029031	Not Available	1075	Open in IMG/M
3300027545\|Ga0209008_1021454	Not Available	1510	Open in IMG/M
3300027559\|Ga0209222_1037400	Not Available	936	Open in IMG/M
3300027633\|Ga0208988_1164076	Not Available	529	Open in IMG/M
3300027635\|Ga0209625_1072975	Not Available	768	Open in IMG/M
3300027667\|Ga0209009_1186272	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	526	Open in IMG/M
3300027737\|Ga0209038_10063308	Not Available	1109	Open in IMG/M
3300027860\|Ga0209611_10131552	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	1617	Open in IMG/M
3300027879\|Ga0209169_10104810	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300027884\|Ga0209275_10502620	Not Available	691	Open in IMG/M
3300027910\|Ga0209583_10201676	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300028047\|Ga0209526_10108711	All Organisms → cellular organisms → Eukaryota	1950	Open in IMG/M
3300028759\|Ga0302224_10476476	Not Available	510	Open in IMG/M
3300028906\|Ga0308309_10435777	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1128	Open in IMG/M
3300029636\|Ga0222749_10502569	Not Available	656	Open in IMG/M
3300029882\|Ga0311368_10727337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	683	Open in IMG/M
3300029923\|Ga0311347_10733235	Not Available	601	Open in IMG/M
3300029945\|Ga0311330_11085493	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	586	Open in IMG/M
3300029951\|Ga0311371_11776751	Not Available	668	Open in IMG/M
3300029952\|Ga0311346_10451210	Not Available	1220	Open in IMG/M
3300029994\|Ga0302283_1165949	Not Available	848	Open in IMG/M
3300030020\|Ga0311344_10909345	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	699	Open in IMG/M
3300030051\|Ga0302195_10057177	All Organisms → cellular organisms → Bacteria → Proteobacteria	2132	Open in IMG/M
3300030053\|Ga0302177_10054413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2415	Open in IMG/M
3300030490\|Ga0302184_10137453	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1071	Open in IMG/M
3300030503\|Ga0311370_10542180	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	1412	Open in IMG/M
3300030507\|Ga0302192_10415701	Not Available	549	Open in IMG/M
3300030520\|Ga0311372_10204035	All Organisms → cellular organisms → Bacteria → Proteobacteria	3297	Open in IMG/M
3300030617\|Ga0311356_11179213	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	706	Open in IMG/M
3300030618\|Ga0311354_10685683	Not Available	982	Open in IMG/M
3300030688\|Ga0311345_11233536	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	541	Open in IMG/M
3300030693\|Ga0302313_10300999	Not Available	640	Open in IMG/M
3300030815\|Ga0265746_1024913	Not Available	746	Open in IMG/M
3300031234\|Ga0302325_13013773	Not Available	544	Open in IMG/M
3300031234\|Ga0302325_13289228	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031344\|Ga0265316_10926136	Not Available	608	Open in IMG/M
3300031446\|Ga0170820_12458146	Not Available	950	Open in IMG/M
3300031525\|Ga0302326_10314481	Not Available	2491	Open in IMG/M
3300031525\|Ga0302326_13662140	Not Available	507	Open in IMG/M
3300031715\|Ga0307476_10756473	Not Available	719	Open in IMG/M
3300031902\|Ga0302322_100225784	All Organisms → cellular organisms → Eukaryota	2062	Open in IMG/M
3300031947\|Ga0310909_11372340	Not Available	566	Open in IMG/M
3300031962\|Ga0307479_11500179	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	631	Open in IMG/M
3300031962\|Ga0307479_12103733	Not Available	512	Open in IMG/M
3300032160\|Ga0311301_10590257	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	1606	Open in IMG/M
3300033480\|Ga0316620_11569787	Not Available	651	Open in IMG/M
3300034282\|Ga0370492_0179257	Not Available	865	Open in IMG/M
3300034282\|Ga0370492_0241632	Not Available	734	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.37%
Aquatic	Environmental → Aquatic	13.08%
Plants	Host-Associated → Plants	6.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.88%
Peat	Environmental → Terrestrial → Peat	21.50%
Freshwater	Environmental → Aquatic → Freshwater	10.28%
Peat Moss	Host-Associated → Plants → Peat Moss	3.74%
Sediment	Environmental → Aquatic → Sediment	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.50%
Loam	Environmental → Terrestrial → Soil → Loam	14.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.48%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.21%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.74%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001124	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3	Environmental	Open in IMG/M
3300001414	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092402

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10348012	3300000546	Quercus Rhizosphere	MSIYITPQDELHVDYQGIALTCPHCQTLTHLTPMAVPKFDDLSRRKP
JGI12692J13336_10021362	3300001124	Forest Soil	MSMYITPHDELHVEYQGIALTCPHCQTLTHLTATAVPTFDDLNRRKPKHVGI
JGI20174J14864_10090182	3300001414	Arctic Peat Soil	MTMYITPQDELHVEYQGIALTCPHCQTLTHLTAVATPKFEDL
Ga0062388_1029518751	3300004635	Bog Forest Soil	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPVAVPKFGDVSRR
Ga0070738_100874752	3300005531	Surface Soil	MSTYISPHDELHVDNQGIALTCPHCLALAHLTPLAVPRF
Ga0070730_101451151	3300005537	Surface Soil	MYITPQDELHVEYQGIALTCPHCQTLTHLTAVAVPKFEDLSRR
Ga0075029_1009587641	3300006052	Watersheds	MSIYITPANELHIEHQGIALTCPHCQTLTHITPTATPQFDDLG
Ga0070765_1010111322	3300006176	Soil	MYITPQDELHLEYQGIALNCPHCQTLTHLTAVAVPSFEDLSRRKPKHI
Ga0073928_109327461	3300006893	Iron-Sulfur Acid Spring	MYITPQDELHVEYQGIALTCPHCQTLTHLTPVAVPTFEDLGRRKPKHV
Ga0099795_105446771	3300007788	Vadose Zone Soil	MSIYITPSNELTVEHQGISLTCPHCQTLSHITAVATPQFDELSRLMPKQIGVV
Ga0104322_1384393	3300007819	Permafrost Soil	MSIYITPQDELHVDYQGIALTCPHCQTLTHLTPMAVPKFDDLSR
Ga0105240_112862301	3300009093	Corn Rhizosphere	MYITPQDELHVEYQGIALTCPHCQTLTHLTPAAVP
Ga0116229_100453071	3300009500	Host-Associated	MSIYITPQHELHIDHQGIALTCPHCQTLTHISVAATPRFDALTQAKPKHAGIVFR
Ga0116220_104960792	3300009525	Peatlands Soil	MTMFIDHQDELHVEYQGIALTCPHCQTLTHLTAVATPKFE
Ga0116125_10413951	3300009628	Peatland	MSIYIDPQDELHVEFQGIALTCPHCQTLTHVSEAATPKFAELTRRRPKNVGIAFRC
Ga0105859_12829501	3300009651	Permafrost Soil	MYITPQDELHVEYQGIALTCPHCQTLTHLTAAATPQFEDLSRRK
Ga0116227_105155022	3300009709	Host-Associated	MTIYITPQDELHVEYQGIALTCPHCQTLTHLTAVAVPKFEDLM
Ga0116226_118191412	3300009787	Host-Associated	MSIYITPEDQLHVDHQGISLTCPHCQTLTHISAVAMPKFE
Ga0136449_1010804282	3300010379	Peatlands Soil	LKIMSIYITSNDELHFECQGISLTCPHCQTLSHLTPAAVPKFEDLSRRRPKQIGIVF
Ga0150983_112815362	3300011120	Forest Soil	MYITPQDELHVEYQGIALTCPHCQTLTHLTVVATPKFE
Ga0150983_160565572	3300011120	Forest Soil	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPIA
Ga0137389_104454972	3300012096	Vadose Zone Soil	MYITPQDELHVEYQGITLTCPHCQTLTHLTPVAVPTFEDLSRRKPKHIGVVF
Ga0137413_115446882	3300012924	Vadose Zone Soil	MYITPQDELHVEYQGIALTCPHCQTLTHLTAVAVPKFED
Ga0137419_117566021	3300012925	Vadose Zone Soil	LKKNMSIYITPSNELQVEHQGISLTCPHCQTLSHITAVATPQFDELSRLMPKQ
Ga0181531_106950562	3300014169	Bog	MYITPQDELHLEYQGIALNCPHCQTLTHLTAVAVPSFEDLSRRKPKHIGI
Ga0182015_104431322	3300014495	Palsa	MSIYITPQDELHIELQSIALTCPHCRTLTHLTPVAVPKFEDLSRRRP
Ga0182019_104188111	3300014498	Fen	MYITPQDELHVEYQGIALTCPHCQTLTHLTAAATPRFEDLSRRKPKHVGM
Ga0181522_102817321	3300014657	Bog	MSIYITPQNELHVEHEGIAITCPHCQTLTHLTPVATPQF
Ga0181519_110686341	3300014658	Bog	MFIDSQDELHVEYQGIALTCPHCQTLTHLTAVGNPKFEEINQRRPKHV
Ga0182030_112280322	3300014838	Bog	MTIYITPQDELHVEYQGIALTCPHCQTLTHLTAVGTP
Ga0167638_11124872	3300015197	Glacier Forefield Soil	MYITPQDELHVEYQGITLTCPHCQTLTHLTPVATPK
Ga0181511_11008681	3300016702	Peatland	MSIYITPNDELHFECQGISLTCPHCQTLSHLTPAAVPKFEDLSRR
Ga0181505_109591312	3300016750	Peatland	MFIDHQDELHVEYQGIALTCPHCQTLTHLTAVATPKFEELNRRRPKNVGIVFKCDACGE
Ga0187888_10816632	3300018008	Peatland	MSIYITPQNELHIEHQGIALTCPHCQTLTHITAVATP
Ga0187863_104290932	3300018034	Peatland	MSIYITPQNELHVEHEGIAITCPHCQTLTHLTPVATPQFDDL
Ga0187859_103910122	3300018047	Peatland	MSIYITPQDELHVELQSIALTCPHCRTLTHLTPVAVPKFEDLSRRRPKQIGI
Ga0187772_104332022	3300018085	Tropical Peatland	MSIYITPQNELHVEHQGIALTCPHCQTLTHLTPVATPQFDDLSRRKPKQIG
Ga0193726_12023681	3300020021	Soil	MYITPQDELHLEYQGIALTCPHCQTLTHLTPVAIPRFEDQFVL
Ga0210407_107761661	3300020579	Soil	MSIYITPQDELHVEYQGIAITCPHCQTLTHLTPVAVPKFGDIS
Ga0210396_105921712	3300021180	Soil	MSMYITPHDELHVEYQGIALTCPHCQTLTHLTATAVPTFDDLSRLKPK
Ga0210388_100006621	3300021181	Soil	MSIYITPQDELHVDYQGIALTCPHCQTLTHLTPIAVPKFE
Ga0210388_100822931	3300021181	Soil	MSIYITPQDELHVEHEGIALTCPHCRTLTHLTPIAVPKFEDLSRR
Ga0210388_101359003	3300021181	Soil	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPIAVPKF
Ga0210388_105937762	3300021181	Soil	MSIYITPQDELHVEYQGIALTCPHCRTLTHLTPVAIPKFDDLS
Ga0210388_110324892	3300021181	Soil	MSMYITPQDELHVEYQGIALTCPHCQTLTHLTAVATPKFEDLSRRKP
Ga0210397_108622271	3300021403	Soil	MSIYITPQDELHVEYQGIAITCPHCQTLTHLTPIAVPKFG
Ga0210387_103636812	3300021405	Soil	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPIAVPKFEDLMRRK
Ga0210386_101408311	3300021406	Soil	MYITPQDELHVEYQGIALTCPHCQTLTHLSAVAVPKFDDL
Ga0210394_104678421	3300021420	Soil	MYITPQDELHIEYQGIALTCPHCQTLTHLTVVATPKFEDLNRRKPKHV
Ga0210394_115901751	3300021420	Soil	MGIYITPQDELRVDYQGIALTCPHCQTLTHLTPMAVPKFEDLSRRKPKHIGIVFR
Ga0210390_115258611	3300021474	Soil	MSIYITPQDELHVEHEGIALTCPHCRTLTHLTPIAVPKFDDLSRR
Ga0210392_100696153	3300021475	Soil	MSIYITPQDELHVDYQGIALTCPHCQTLTHLTPMAVPKFDDLSRRKPKNIG
Ga0242658_10910722	3300022530	Soil	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPIAVPKFEELMS
Ga0247691_10553921	3300024222	Soil	MYITPQDELHLEYQGIALTCPHCQTLTHLTAVAVPTFEDLSRRRPK
Ga0247678_10185241	3300024325	Soil	MYITPQDELHLEYQGIALTCPHCQTLTHLTAVAVPTF
Ga0208479_10622192	3300025474	Arctic Peat Soil	MFIDNHDELHVEYQGIALTCPHCQTLTHLTAVGTPKFEELNLRRPKNVGIVFK
Ga0257158_11218822	3300026515	Soil	MYITPQDELHVEYQGIALTCPHCQTLTHLTAVAVPKFEDLAR
Ga0209332_10285332	3300027439	Forest Soil	MYITPQDELHVEYQGIALTCPHCQTLTHLTAVAVPKFEDLSRRKPKHV
Ga0208987_10686321	3300027496	Forest Soil	MSIYITPQDELHVEHEGIALTCPQCQTLTHITATAT
Ga0208985_10290312	3300027528	Forest Soil	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPVAVPKFEDL
Ga0209008_10214542	3300027545	Forest Soil	MSIYITPQDELHVDYQGIALTCPHCQTLTHLTPMAVPKFEDLSRRK
Ga0209222_10374002	3300027559	Forest Soil	MSIYITPQDELHVEHEGIALTCPHCRTLTHLTPIAAPKFDDLSRRKPKQ
Ga0208988_11640761	3300027633	Forest Soil	MSMYITPQDELHIEYQGIALTCPHCQTLTHLTAVAVPKFEDLS
Ga0209625_10729751	3300027635	Forest Soil	MSIYITPQDELHVDYQGIALTCPHCQTLTHLTPMAVPKFDELS
Ga0209009_11862721	3300027667	Forest Soil	MSMYITPQDELHVEYQGIALTCPHCQTLTHLTVVATPKFEDLSHRKPKHV
Ga0209038_100633082	3300027737	Bog Forest Soil	MSIYITPQDELHVEYQGIAITCPHCQTLTHLTPVAVPKFGD
Ga0209611_101315522	3300027860	Host-Associated	MHIDSQDELHVDHTGIALTCPHCQTLTHLSTAAVPK
Ga0209169_101048102	3300027879	Soil	MYITPQDELHLEYQGIALTCPHCQTLTHLTAVAVPSFEDLSRRKPKHIGIVFR
Ga0209275_105026202	3300027884	Soil	MYITPQDELHLEYQGIALTCPHCQTLTHLTAVAVPTFEDLS
Ga0209583_102016762	3300027910	Watersheds	MTIYIDPLDELHTDYQGIALTCPHCQTLSHVSAAAVPKFETSSSG
Ga0209526_101087111	3300028047	Forest Soil	MSAYITPQNELHIDHQGIALTCPHCQTLTHITAVATPQ
Ga0302224_104764761	3300028759	Palsa	MSIYITPQDELHVELQSIALTCPHCRTLTHLTPVAVPKFEDLSRR
Ga0308309_104357771	3300028906	Soil	MSIYITPQDELHVEYQGIALTCPHCQTLSHLTAVAVPK
Ga0222749_105025692	3300029636	Soil	MYITQQDELHVEYQGIALTCPHCQTLTHLTVAATP
Ga0311368_107273372	3300029882	Palsa	MAIYITPQDELHVEYQGIALTCPHCQTLTHLTAMAIPKFADLFRTMPKHIG
Ga0311347_107332351	3300029923	Fen	MTIYIDPLDELHTDYQGIALTCPHCQTLSHVSAIAVPKFEILS
Ga0311330_110854931	3300029945	Bog	MTMYITPQDELHIEHHGIALTCPHCQTLTHITAVA
Ga0311371_117767511	3300029951	Palsa	MSIYITPQDELHVELQSIALTCPHCRTLTHLTPVAVPKFEDLSRRRPKQIG
Ga0311346_104512102	3300029952	Bog	MSIYITPQDELHVEHEGIALTCPHCRTLTHLTPIAVPK
Ga0302283_11659491	3300029994	Fen	MATHITPQDELHVEYQGIALTCPHCQTLTHLTAMAIPKFADLFRTKPK
Ga0311344_109093451	3300030020	Bog	MSMYITPQDELHVEYQGIALTCPHCQTLTHLTAVAVPKFEDLSRRKPK
Ga0302195_100571771	3300030051	Bog	MSIYITPQNELHVEHEGIALTCPHCQTLTHLTPVATPQFDDLARR
Ga0302177_100544131	3300030053	Palsa	MAIYITPQDELHVEYQGIALTCPHCQTLTHLTAMGIPRF
Ga0302184_101374531	3300030490	Palsa	MSIYITPQDELHIELQSIALTCPHCRTLTHLTPVAVPKFED
Ga0311370_105421802	3300030503	Palsa	MSIYITPQDELHIELQSIALTCPHCRTLTHLTPVAVP
Ga0302192_104157012	3300030507	Bog	MSIYITPQNELHVEHEGIALTCPHCQTLTHLTPVATPQFDDLARRKPKQIGIVFR
Ga0311372_102040351	3300030520	Palsa	MTMYITPQDELHIEHQGIALTCPHCQTLTHITAVATP
Ga0311356_111792131	3300030617	Palsa	MSIYITPQDELHVELQSIALTCPHCRTLTHLTPVAVPKFEDLS
Ga0311354_106856832	3300030618	Palsa	MSIYITPQDELHIELQSIALTCPHCRTLTHLTPVAVPKFEDLSRRRPKQ
Ga0311345_112335362	3300030688	Bog	MSIYITPQNELHVEHQGIALTCPHCQTLTHVTAVATPQFDELTRRKPKQIGIV
Ga0302313_103009991	3300030693	Palsa	MAIYITPQDELHVEYQGIALTCPHCQTLTHLTAMGIPRFADLFRT
Ga0265746_10249132	3300030815	Soil	MSIYITPQDELHVEYQGIALTCPHCQTLTHLTPIAV
Ga0302325_130137732	3300031234	Palsa	MSMYITAQNELQVDHQGITLTCPHCQTLAHIAAAAVPRFDDLSRRKPKQIGIVFR
Ga0302325_132892281	3300031234	Palsa	MSIYITPQDELHVEHEGIALTCPHCRTLTHLTPVAVPKFEDLN
Ga0265316_109261362	3300031344	Rhizosphere	MSMYITPQDELHVEYQGIALTCPHCQTLTHLTAVATPRFEDLSRRKPKHVGMVF
Ga0170820_124581462	3300031446	Forest Soil	MSIYITPQDELHVDYQGIALTCPHCQTLTHLTPLAVPKFEELSR
Ga0302326_103144811	3300031525	Palsa	MSIYITPQDELHIELQSIALTCPHCRTLTHLTPVAVPKFEDLS
Ga0302326_136621402	3300031525	Palsa	MSIYITPQDELHVEHEGIALTCPHCRTLTHLTPVA
Ga0307476_107564731	3300031715	Hardwood Forest Soil	MSIYITPQDELHIELQSIALTCPHCRTLTHLTPVAVPKFEDLSRRRPK
Ga0302322_1002257843	3300031902	Fen	MTIYIDPLDELHTDYQGIALTCPHCQMLSHVSAIAVPKFEILSR
Ga0310909_113723402	3300031947	Soil	MSIYITPQDELHVEYQGIALTCPHCSTLTHLTAVAVPKFEELSR
Ga0307479_115001791	3300031962	Hardwood Forest Soil	MSVYITPQDELHVEHEGIALTCPQCQTLTHITAAATP
Ga0307479_121037331	3300031962	Hardwood Forest Soil	MYITPQDELHLEYQGIALTCPHCQTLTHLTAVAVPSFEDLSRRKPKHIGIV
Ga0311301_105902571	3300032160	Peatlands Soil	MSIYITSNDELHFECQGISLTCPHCQTLSHLTPAAVPKFEDLSRRRPKQIGIVFACDAC
Ga0316620_115697872	3300033480	Soil	MIHIDPQDRLQIDCQGIALTCPHCQTLTHLTPVAVPKFAAISRRKPK
Ga0370492_0179257_748_864	3300034282	Untreated Peat Soil	MSLYITPQDELHVEYQGIAVTCPHCQTLTHLTATAVPKF
Ga0370492_0241632_584_733	3300034282	Untreated Peat Soil	MSIYITPQDELHVEHEGIALTCPHCRTLTHLTPIAVPKFDDLSRRKPKQV

Hidden Markov Model


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